Clone Name | rbasd13g02 |
---|---|
Clone Library Name | barley_pub |
>gb|BT009282.1| Triticum aestivum clone wlm0.pk0003.f3:fis, full insert mRNA sequence Length = 2335 Score = 1130 bits (570), Expect = 0.0 Identities = 672/701 (95%), Gaps = 5/701 (0%) Strand = Plus / Minus Query: 21 ggttatttgaagtacagtggtattcgtaatcctatatcaacacttcatctgtacttttat 80 |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2274 ggttatttgaagtat-gtggtattcgtaatcctatatcaacacttcatctgtacttttat 2216 Query: 81 catgcacacagcgtgtccggactgtacagtatagtgca-ccacataacaggtatacacat 139 | ||||||||||||||||| ||||||||||||||| || |||||||||||||| ||||| Sbjct: 2215 cttgcacacagcgtgtccgtactgtacagtatagtacaaccacataacaggta--cacat 2158 Query: 140 ttacgttgcatgtatcggctactctggcagcaaccactatacgctaagcttgggacggta 199 |||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||| Sbjct: 2157 ttacgttgaatgtatcggctactctggcagtaaccactatacactaagcttgggacggta 2098 Query: 200 atacacactcgcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcagg 259 |||||||| |||||||||||||||||| ||||||||||||||||| ||||| |||||||| Sbjct: 2097 atacacacacgcaaatttcttcgtaattgagtcaacacacgccattcttattctttcagg 2038 Query: 260 cgttgccgggttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccgc 319 |||||||||||||||||| ||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 2037 cgttgccgggttgtcgagagggaaccagtcgagatgaccctcctccgccctagctgccgc 1978 Query: 320 gatcgcgtcttttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccgac 379 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct: 1977 gatcgcgtcttttatcgcaaacaagatggcggaagcgaggaagaacggtggctctcctac 1918 Query: 380 agccttggatgagtgtatggcccttggatttggaacacccttcaatagtgaaaccttgaa 439 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 1917 agccttggatgagtgtatagcccttggatttggaacacccttcaatagtgaaaccttgaa 1858 Query: 440 attgagaggtatatcatttatagagggtattttgtaagagccaggaccacaagtgaaaag 499 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1857 attgagaggtatatcatttacagagggtattttgtaagagccaggaccacaagtgaaaag 1798 Query: 500 gtgtccaggtcgaatccacttgtggttgtcatccccccattttagctcttccatggcagc 559 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1797 gtatccaggtcgaatccacttgtggttgtcatccccccattttagctcttccatggcagc 1738 Query: 560 caaacccagaccttgaatgaaagctccttcaatctggccaatatcaattgctggattaat 619 | |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1737 ccaacccaaaccttggatgaaagctccttcaatctggccaatatcaattgctggattaat 1678 Query: 620 cgaatagccgagatccatgacaatatcagctgtccttgtgtggaaatccccagttagggg 679 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 1677 cgaatagccaagatccatgacaatatcagctgtccttgtgtggaaatccccagtta-ggg 1619 Query: 680 tgtcaatctcaacttctgcaaatgcggctccatacgtgaaa 720 |||||||||||||||||||||||||||||||||| |||||| Sbjct: 1618 tgtcaatctcaacttctgcaaatgcggctccataggtgaaa 1578
>gb|AY105293.1| Zea mays PCO121721 mRNA sequence Length = 1825 Score = 505 bits (255), Expect = e-140 Identities = 448/511 (87%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 210 gcaaatttcttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccggg 269 ||||||||||| |||||||| || ||||| ||||| ||||| ||||| || || |||||| Sbjct: 1499 gcaaatttctttgtaatggaatccacacatgccattcttattctttccggtgtcgccggg 1440 Query: 270 ttgtcgagggggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtct 329 |||||||| || |||||||| | || |||||||| ||||| ||||| | |||||| || Sbjct: 1439 ttgtcgagtggaaaccagtccaagtgcccctcctcagcccttgccgcagagatcgcatcc 1380 Query: 330 tttatcgcaaacaagacggcggaagcgaggaagaacggtggctctccgacagccttggat 389 ||||||||||| |||||||||||| | ||||| || ||||||||||| || || ||||| Sbjct: 1379 tttatcgcaaataagacggcggaacctaggaaaaatggtggctctcccacggctttggaa 1320 Query: 390 gagtgtatggcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggt 449 || || || ||| ||||||||||||||||||| ||||| |||||||||||||| |||||| Sbjct: 1319 gaatgaatagcctttggatttggaacaccctttaatagagaaaccttgaaattcagaggt 1260 Query: 450 atatcatttatagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggt 509 |||||||||| |||||||||||||||||| |||||||| || ||||| |||||||||||| Sbjct: 1259 atatcatttacagagggtattttgtaagaaccaggaccgcaggtgaagaggtgtccaggt 1200 Query: 510 cgaatccacttgtggttgtcatccccccattttagctcttccatggcagccaaacccaga 569 ||||||||||| ||||| ||||||||||||||||||||||| ||||| ||| | |||| Sbjct: 1199 cgaatccacttatggttatcatccccccattttagctcttctatggctgcccagcccaat 1140 Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggattaatcgaatagccg 629 ||||| || ||||||||||||||||||||||| ||||||||||||||||| ||| | ||| Sbjct: 1139 ccttggataaaagctccttcaatctggccaatgtcaattgctggattaattgaaaatccg 1080 Query: 630 agatccatgacaatatcagctgtccttgtgtggaaatccccagttaggggtgtcaatctc 689 |||||||| |||||||||||||||||||||| ||||||||||||| ||||||| ||||| Sbjct: 1079 agatccataacaatatcagctgtccttgtgtaaaaatccccagtta-gggtgtcgatctc 1021 Query: 690 aacttctgcaaatgcggctccatacgtgaaa 720 ||||||||||||||| |||||||| |||||| Sbjct: 1020 aacttctgcaaatgcagctccatatgtgaaa 990
>dbj|AK103000.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033116G02, full insert sequence Length = 3833 Score = 504 bits (254), Expect = e-139 Identities = 486/562 (86%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 3742 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 3683 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 3682 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 3623 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 3622 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3563 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 3562 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3503 Query: 399 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 458 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 3502 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3443 Query: 459 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 518 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3442 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3383 Query: 519 ttgtggttgtcatccccccattttagctcttccatggcagccaaacccagaccttgaatg 578 |||||||| ||||||||||||||||| ||||||| ||| ||| |||| | ||||| || Sbjct: 3382 ttgtggttatcatccccccattttagttcttccagggccgcccaacctaatccttggata 3323 Query: 579 aaagctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatg 638 ||| ||||||||||||||||||||||||| || |||||||| ||| |||| |||||||| Sbjct: 3322 aaacctccttcaatctggccaatatcaatagccggattaattgaacagccaagatccata 3263 Query: 639 acaatatcagctgtccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgc 698 |||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 3262 acaatatctactgtccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgc 3204 Query: 699 aaatgcggctccatacgtgaaa 720 |||||| ||||| || |||||| Sbjct: 3203 aaatgctgctccgtatgtgaaa 3182
>dbj|AK065099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001M21, full insert sequence Length = 4458 Score = 504 bits (254), Expect = e-139 Identities = 486/562 (86%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | |||||||||||||||||||||||||||||| || || ||| ||||| Sbjct: 4136 tactttggcagtagccactatacgctaagcttgggacggtaatatacgctagcagatttc 4077 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 4076 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4017 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 4016 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 3957 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 3956 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 3897 Query: 399 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 458 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 3896 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 3837 Query: 459 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 518 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3836 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3777 Query: 519 ttgtggttgtcatccccccattttagctcttccatggcagccaaacccagaccttgaatg 578 |||||||| ||||||||||||||||| ||||||| ||| ||| |||| | ||||| || Sbjct: 3776 ttgtggttatcatccccccattttagttcttccagggccgcccaacctaatccttggata 3717 Query: 579 aaagctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatg 638 ||| ||||||||||||||||||||||||| || |||||||| ||| |||| |||||||| Sbjct: 3716 aaacctccttcaatctggccaatatcaatagccggattaattgaacagccaagatccata 3657 Query: 639 acaatatcagctgtccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgc 698 |||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 3656 acaatatctactgtccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgc 3598 Query: 699 aaatgcggctccatacgtgaaa 720 |||||| ||||| || |||||| Sbjct: 3597 aaatgctgctccgtatgtgaaa 3576
>dbj|AK067814.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116P05, full insert sequence Length = 4485 Score = 496 bits (250), Expect = e-137 Identities = 485/562 (86%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 4257 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 4198 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 4197 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 4138 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 4137 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 4078 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 4077 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 4018 Query: 399 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 458 || ||||||| ||| ||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 4017 acctttggattcaaaacgtccttcaaaagtgagaccttgaagtttagaggtatatcattt 3958 Query: 459 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 518 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 3957 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 3898 Query: 519 ttgtggttgtcatccccccattttagctcttccatggcagccaaacccagaccttgaatg 578 |||||||| ||||||||||||||||| ||||||| ||| ||| |||| | ||||| || Sbjct: 3897 ttgtggttatcatccccccattttagttcttccagggccgcccaacctaatccttggata 3838 Query: 579 aaagctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatg 638 ||| ||||||||||||||||||||||||| || |||||||| ||| |||| |||||||| Sbjct: 3837 aaacctccttcaatctggccaatatcaatagccggattaattgaacagccaagatccata 3778 Query: 639 acaatatcagctgtccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgc 698 |||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 3777 acaatatctactgtccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgc 3719 Query: 699 aaatgcggctccatacgtgaaa 720 |||||| ||||| || |||||| Sbjct: 3718 aaatgctgctccgtatgtgaaa 3697
>dbj|AK073276.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033024D24, full insert sequence Length = 1653 Score = 488 bits (246), Expect = e-134 Identities = 484/562 (86%), Gaps = 1/562 (0%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 1486 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 1427 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| |||| || Sbjct: 1426 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcaagt 1367 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 1366 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 1307 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 1306 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 1247 Query: 399 gcccttggatttggaacacccttcaatagtgaaaccttgaaattgagaggtatatcattt 458 || ||||||| ||| |||||||| ||||| |||||||| || ||||||||||||||| Sbjct: 1246 acctttggattcaaaacgcccttcaaaagtgagaccttgaagtttagaggtatatcattt 1187 Query: 459 atagagggtattttgtaagagccaggaccacaagtgaaaaggtgtccaggtcgaatccac 518 | |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||| Sbjct: 1186 acagagggtattttgtaagagccaggcccacaagtgaaaagatgtccaggtcgaatccac 1127 Query: 519 ttgtggttgtcatccccccattttagctcttccatggcagccaaacccagaccttgaatg 578 |||||||| ||||||||||||||||| ||||||| ||| ||| |||| | ||||| || Sbjct: 1126 ttgtggttatcatccccccattttagttcttccagggccgcccaacctaatccttggata 1067 Query: 579 aaagctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatg 638 ||| |||| |||||||||||||||||||| || |||||||| ||| |||| |||||||| Sbjct: 1066 aaacctccctcaatctggccaatatcaatagccggattaattgaacagccaagatccata 1007 Query: 639 acaatatcagctgtccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgc 698 |||||||| ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct: 1006 acaatatctactgtccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgc 948 Query: 699 aaatgcggctccatacgtgaaa 720 |||||| ||||| || |||||| Sbjct: 947 aaatgctgctccgtatgtgaaa 926
>gb|AC114896.5| Oryza sativa chromosome 3 BAC OSJNBa0091B22 genomic sequence, complete sequence Length = 115815 Score = 210 bits (106), Expect = 5e-51 Identities = 160/178 (89%) Strand = Plus / Plus Query: 418 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 477 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 82695 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 82754 Query: 478 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 537 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 82755 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 82814 Query: 538 attttagctcttccatggcagccaaacccagaccttgaatgaaagctccttcaatctg 595 ||||||| ||||||| ||| ||| |||| | ||||| || ||| ||||||||||||| Sbjct: 82815 attttagttcttccagggccgcccaacctaatccttggataaaacctccttcaatctg 82872 Score = 180 bits (91), Expect = 4e-42 Identities = 211/251 (84%) Strand = Plus / Plus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 81705 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 81764 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 81765 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 81824 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 81825 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 81884 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 81885 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 81944 Query: 399 gcccttggatt 409 || ||||||| Sbjct: 81945 acctttggatt 81955 Score = 135 bits (68), Expect = 2e-28 Identities = 114/128 (89%), Gaps = 1/128 (0%) Strand = Plus / Plus Query: 593 ctggccaatatcaattgctggattaatcgaatagccgagatccatgacaatatcagctgt 652 ||||||||||||||| || |||||||| ||| |||| |||||||| |||||||| |||| Sbjct: 82968 ctggccaatatcaatagccggattaattgaacagccaagatccataacaatatctactgt 83027 Query: 653 ccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgcaaatgcggctccat 712 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||| | Sbjct: 83028 ccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgcaaatgctgctccgt 83086 Query: 713 acgtgaaa 720 | |||||| Sbjct: 83087 atgtgaaa 83094
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 210 bits (106), Expect = 5e-51 Identities = 160/178 (89%) Strand = Plus / Minus Query: 418 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 477 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 17809420 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17809361 Query: 478 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 537 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 17809360 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17809301 Query: 538 attttagctcttccatggcagccaaacccagaccttgaatgaaagctccttcaatctg 595 ||||||| ||||||| ||| ||| |||| | ||||| || ||| ||||||||||||| Sbjct: 17809300 attttagttcttccagggccgcccaacctaatccttggataaaacctccttcaatctg 17809243 Score = 180 bits (91), Expect = 4e-42 Identities = 211/251 (84%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 17810410 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17810351 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 17810350 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17810291 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 17810290 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17810231 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 17810230 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17810171 Query: 399 gcccttggatt 409 || ||||||| Sbjct: 17810170 acctttggatt 17810160 Score = 135 bits (68), Expect = 2e-28 Identities = 114/128 (89%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 593 ctggccaatatcaattgctggattaatcgaatagccgagatccatgacaatatcagctgt 652 ||||||||||||||| || |||||||| ||| |||| |||||||| |||||||| |||| Sbjct: 17809147 ctggccaatatcaatagccggattaattgaacagccaagatccataacaatatctactgt 17809088 Query: 653 ccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgcaaatgcggctccat 712 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||| | Sbjct: 17809087 ccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgcaaatgctgctccgt 17809029 Query: 713 acgtgaaa 720 | |||||| Sbjct: 17809028 atgtgaaa 17809021
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 210 bits (106), Expect = 5e-51 Identities = 160/178 (89%) Strand = Plus / Minus Query: 418 ccttcaatagtgaaaccttgaaattgagaggtatatcatttatagagggtattttgtaag 477 ||||||| ||||| |||||||| || |||||||||||||||| ||||||||||||||||| Sbjct: 17802961 ccttcaaaagtgagaccttgaagtttagaggtatatcatttacagagggtattttgtaag 17802902 Query: 478 agccaggaccacaagtgaaaaggtgtccaggtcgaatccacttgtggttgtcatcccccc 537 ||||||| |||||||||||||| |||||||||||||||||||||||||| |||||||||| Sbjct: 17802901 agccaggcccacaagtgaaaagatgtccaggtcgaatccacttgtggttatcatcccccc 17802842 Query: 538 attttagctcttccatggcagccaaacccagaccttgaatgaaagctccttcaatctg 595 ||||||| ||||||| ||| ||| |||| | ||||| || ||| ||||||||||||| Sbjct: 17802841 attttagttcttccagggccgcccaacctaatccttggataaaacctccttcaatctg 17802784 Score = 180 bits (91), Expect = 4e-42 Identities = 211/251 (84%) Strand = Plus / Minus Query: 159 tactctggcagcaaccactatacgctaagcttgggacggtaatacacactcgcaaatttc 218 |||| |||||| | ||||||||| |||||||||||||||||||| || || ||||||||| Sbjct: 17803951 tactttggcagtagccactatacactaagcttgggacggtaatatacgctagcaaatttc 17803892 Query: 219 ttcgtaatggagtcaacacacgccatccttatcctttcaggcgttgccgggttgtcgagg 278 || || ||||| || || || ||||| ||||| ||||| || ||||| ||| ||||||| Sbjct: 17803891 tttgtgatggaatccacgcatgccattcttattctttccggtgttgctgggctgtcgagt 17803832 Query: 279 gggaaccagtcgagatggccctcctccgccctagccgccgcgatcgcgtcttttatcgca 338 ||||||||||||| || |||||||| || || || || | ||||| || ||||| ||| Sbjct: 17803831 gggaaccagtcgaagtgaccctcctcagctcttgcggcagatatcgcatcctttatggca 17803772 Query: 339 aacaagacggcggaagcgaggaagaacggtggctctccgacagccttggatgagtgtatg 398 ||||||||||| ||| ||||||| |||||||||||||| ||||||||||||||||| ||| Sbjct: 17803771 aacaagacggctgaaccgaggaaaaacggtggctctcctacagccttggatgagtgaatg 17803712 Query: 399 gcccttggatt 409 || ||||||| Sbjct: 17803711 acctttggatt 17803701 Score = 135 bits (68), Expect = 2e-28 Identities = 114/128 (89%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 593 ctggccaatatcaattgctggattaatcgaatagccgagatccatgacaatatcagctgt 652 ||||||||||||||| || |||||||| ||| |||| |||||||| |||||||| |||| Sbjct: 17802688 ctggccaatatcaatagccggattaattgaacagccaagatccataacaatatctactgt 17802629 Query: 653 ccttgtgtggaaatccccagttaggggtgtcaatctcaacttctgcaaatgcggctccat 712 ||||||||||||||||||||||| |||| ||||| ||||||||||||||||| ||||| | Sbjct: 17802628 ccttgtgtggaaatccccagtta-gggtatcaatttcaacttctgcaaatgctgctccgt 17802570 Query: 713 acgtgaaa 720 | |||||| Sbjct: 17802569 atgtgaaa 17802562
>emb|Z83318.1|CEF55B11 Caenorhabditis elegans Cosmid F55B11, complete sequence Length = 33359 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Plus Query: 569 accttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 1759 accttgaataaaagctccttcaatttgtccaatatcaattgcaggatt 1806
>ref|NM_070346.2| Caenorhabditis elegans F55B11.1 (F55B11.1) mRNA, complete cds Length = 4126 Score = 63.9 bits (32), Expect = 7e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 569 accttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||||||| |||||||||||||| || |||||||||||||| ||||| Sbjct: 3690 accttgaataaaagctccttcaatttgtccaatatcaattgcaggatt 3643
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 56.0 bits (28), Expect = 2e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 564 cccagaccttgaatgaaagctccttcaatctggccaatatcaattgctggattaat 619 |||| |||||||| ||||| |||||||| || ||||||||||||||||| ||||| Sbjct: 5161101 cccataccttgaacaaaagcgccttcaatttgaccaatatcaattgctgggttaat 5161046
>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome Length = 3059876 Score = 54.0 bits (27), Expect = 7e-04 Identities = 51/59 (86%) Strand = Plus / Minus Query: 564 cccagaccttgaatgaaagctccttcaatctggccaatatcaattgctggattaatcga 622 |||| |||||||| ||| | ||||||||||| || ||||||||||| ||||||||||| Sbjct: 1382961 cccataccttgaacaaaaccgccttcaatctgaccgatatcaattgcaggattaatcga 1382903
>dbj|D38159.1| Bombyx mori mRNA for xanthine dehydrogenase, complete cds Length = 4260 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||| |||||| | |||||||||||||||||||| || |||||||| Sbjct: 3791 ccttgtatgaaaccgccttcaatctggccaatatctatcgctggatt 3745
>dbj|AB005911.1| Bombyx mori DNA for xanthine dehydrogenase, partial and complete cds Length = 21115 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||| |||||| | |||||||||||||||||||| || |||||||| Sbjct: 14868 ccttgtatgaaaccgccttcaatctggccaatatctatcgctggatt 14822
>dbj|AB060285.1| Bombyx mori BmXDH1 mRNA for truncated xanthine dehydrogenase, complete cds, mutant strain:oq Length = 4123 Score = 54.0 bits (27), Expect = 7e-04 Identities = 42/47 (89%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||| |||||| | |||||||||||||||||||| || |||||||| Sbjct: 3737 ccttgtatgaaaccgccttcaatctggccaatatctatcgctggatt 3691
>ref|NM_119655.2| Arabidopsis thaliana electron transporter/ iron ion binding / oxidoreductase/ xanthine dehydrogenase AT4G34890 mRNA, complete cds Length = 4254 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 582 gctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatgaca 641 |||||||| || || |||| |||||| ||||| |||| ||||| ||||| |||| | Sbjct: 3685 gctccttctatttgtccaacatcaatggctgggttaagagaatatccgaggtccaacatt 3626 Query: 642 atatcagctgtccttgtgtggaaatccccagt 673 |||||||||| |||||||||||||| ||||| Sbjct: 3625 atatcagctgctcttgtgtggaaatcaccagt 3594
>ref|NR_001557.2| Homo sapiens aldehyde oxidase 2 (AOX2) on chromosome 2 Length = 989 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 585 ccttcaatctggccaatatcaattgctggatt 616 ||||||||||| ||||||||||| |||||||| Sbjct: 352 ccttcaatctgcccaatatcaatggctggatt 321
>gb|AY171562.1| Arabidopsis thaliana xanthine dehydrogenase 1 (XDH1) mRNA, complete cds Length = 4282 Score = 48.1 bits (24), Expect = 0.040 Identities = 75/92 (81%) Strand = Plus / Minus Query: 582 gctccttcaatctggccaatatcaattgctggattaatcgaatagccgagatccatgaca 641 |||||||| || || |||| |||||| ||||| |||| ||||| ||||| |||| | Sbjct: 3685 gctccttctatttgtccaacatcaatggctgggttaagagaatatccgaggtccaacatt 3626 Query: 642 atatcagctgtccttgtgtggaaatccccagt 673 |||||||||| |||||||||||||| ||||| Sbjct: 3625 atatcagctgctcttgtgtggaaatcaccagt 3594
>gb|AY245868.1| Homo sapiens aldehyde oxidase-like protein (AOX2) pseudogene mRNA, partial sequence Length = 989 Score = 48.1 bits (24), Expect = 0.040 Identities = 30/32 (93%) Strand = Plus / Minus Query: 585 ccttcaatctggccaatatcaattgctggatt 616 ||||||||||| ||||||||||| |||||||| Sbjct: 352 ccttcaatctgcccaatatcaatggctggatt 321
>ref|XM_516018.1| PREDICTED: Pan troglodytes similar to aldeyde oxidase (LOC459863), mRNA Length = 4392 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || || |||||||||||||| || ||||| |||||||| Sbjct: 3608 ccttgaataaatgcaccttcaatctggcctatgtcaatggctggatt 3562
>ref|NM_001159.3| Homo sapiens aldehyde oxidase 1 (AOX1), mRNA Length = 4949 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || || |||||||||||||| || ||||| |||||||| Sbjct: 3733 ccttgaataaatgcaccttcaatctggcctatgtcaatggctggatt 3687
>emb|CR378670.1| Photobacterium profundum SS9; segment 8/12 Length = 348672 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 569 accttgaatgaaagctccttcaatctggccaatatcaat 607 ||||||||| ||| | |||||||||||||| |||||||| Sbjct: 148093 accttgaataaaaccaccttcaatctggccgatatcaat 148055
>dbj|AB201545.1| Macaca fascicularis mRNA for aldehyde oxidase, complete cds Length = 4430 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || || |||||||||||||| || ||||| |||||||| Sbjct: 3658 ccttgaataaatgcaccttcaatctggcctatgtcaatggctggatt 3612
>gb|AF258811.1|AF258811 Lycopersicon esculentum aldehyde oxidase (AO4) pseudogene, mRNA sequence Length = 4273 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 ||||||| |||||| ||||||||||| || ||||||| |||||||| Sbjct: 3798 ccttgaacgaaagccccttcaatctgtcccatatcaacggctggatt 3752
>gb|AF058984.1|AF058984 Scaptodrosophila lebanonensis xanthine dehydrogenase (Xdh) gene, partial cds Length = 2157 Score = 46.1 bits (23), Expect = 0.16 Identities = 35/39 (89%) Strand = Plus / Minus Query: 578 gaaagctccttcaatctggccaatatcaattgctggatt 616 |||||| || |||||||||||||||||||| || ||||| Sbjct: 2157 gaaagcgccctcaatctggccaatatcaatggccggatt 2119
>gb|L11005.1|HUMAOX Human aldehyde oxidase (hAOX) mRNA, complete cds Length = 4957 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || || |||||||||||||| || ||||| |||||||| Sbjct: 3762 ccttgaataaatgcaccttcaatctggcctatgtcaatggctggatt 3716
>dbj|AB046692.1| Homo sapiens hAO mRNA for aldeyde oxidase, complete cds Length = 4170 Score = 46.1 bits (23), Expect = 0.16 Identities = 41/47 (87%) Strand = Plus / Minus Query: 570 ccttgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || || |||||||||||||| || ||||| |||||||| Sbjct: 3732 ccttgaataaatgcaccttcaatctggcctatgtcaatggctggatt 3686
>gb|AF058980.1|AF058980 Drosophila subsaltans xanthine dehydrogenase (Xdh) gene, partial cds Length = 2201 Score = 44.1 bits (22), Expect = 0.63 Identities = 37/42 (88%) Strand = Plus / Minus Query: 578 gaaagctccttcaatctggccaatatcaattgctggattaat 619 |||||| ||||||||||| ||||| ||||| || |||||||| Sbjct: 2201 gaaagcaccttcaatctgaccaatgtcaatagccggattaat 2160
>ref|NM_011723.2| Mus musculus xanthine dehydrogenase (Xdh), mRNA Length = 4587 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3851 ggtggctcgccgacagccttggatg 3827
>gb|AC129179.3| Mus musculus BAC clone RP23-240C24 from chromosome 18, complete sequence Length = 208462 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Plus Query: 420 ttcaatagtgaaaccttgaaa 440 ||||||||||||||||||||| Sbjct: 41754 ttcaatagtgaaaccttgaaa 41774
>gb|BC065699.1| Mus musculus cDNA clone IMAGE:4009388, **** WARNING: chimeric clone **** Length = 3748 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3002 ggtggctcgccgacagccttggatg 2978
>emb|CR762396.8| Zebrafish DNA sequence from clone DKEY-262O12 in linkage group 1, complete sequence Length = 163635 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 675 aggggtgtcaatctcaacttctgca 699 ||||||||||||||||| ||||||| Sbjct: 44096 aggggtgtcaatctcaatttctgca 44072
>ref|XM_789753.1| PREDICTED: Strongylocentrotus purpuratus similar to CG7642-PA (LOC590136), mRNA Length = 2079 Score = 42.1 bits (21), Expect = 2.5 Identities = 27/29 (93%) Strand = Plus / Minus Query: 573 tgaatgaaagctccttcaatctggccaat 601 |||||||| ||||||||||||||||||| Sbjct: 1712 tgaatgaagcctccttcaatctggccaat 1684
>emb|X62932.1|MMXD M.musculus mRNA for xanthine dehydrogenase Length = 4538 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3799 ggtggctcgccgacagccttggatg 3775
>emb|AL161586.2|ATCHRIV82 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 82 Length = 195165 Score = 42.1 bits (21), Expect = 2.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 597 ccaatatcaattgctggattaatcgaatagccgagatccatgacaatatcagctgtcctt 656 |||| |||||| ||||| |||| ||||| ||||| |||| | |||||||||| ||| Sbjct: 74098 ccaacatcaatggctgggttaagagaatatccgaggtccaacattatatcagctgctctt 74157 Query: 657 gtgtggaaatccccagt 673 ||||||||||| ||||| Sbjct: 74158 gtgtggaaatcaccagt 74174
>emb|AL079347.1|ATF11I11 Arabidopsis thaliana DNA chromosome 4, BAC clone F11I11 (ESSA project) Length = 103150 Score = 42.1 bits (21), Expect = 2.5 Identities = 63/77 (81%) Strand = Plus / Plus Query: 597 ccaatatcaattgctggattaatcgaatagccgagatccatgacaatatcagctgtcctt 656 |||| |||||| ||||| |||| ||||| ||||| |||| | |||||||||| ||| Sbjct: 44640 ccaacatcaatggctgggttaagagaatatccgaggtccaacattatatcagctgctctt 44699 Query: 657 gtgtggaaatccccagt 673 ||||||||||| ||||| Sbjct: 44700 gtgtggaaatcaccagt 44716
>gb|AC037453.8| Homo sapiens chromosome 8, clone RP11-247O9, complete sequence Length = 97386 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 560 caaacccagaccttgaatgaaagct 584 ||||||||| ||||||||||||||| Sbjct: 12102 caaacccagtccttgaatgaaagct 12078
>dbj|AK134156.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830460G01 product:xanthine dehydrogenase, full insert sequence Length = 3096 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 2351 ggtggctcgccgacagccttggatg 2327
>dbj|AK144700.1| Mus musculus lung RCB-0558 LLC cDNA, RIKEN full-length enriched library, clone:G730024I24 product:xanthine dehydrogenase, full insert sequence Length = 4553 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3817 ggtggctcgccgacagccttggatg 3793
>dbj|AK160010.1| Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420044B05 product:xanthine dehydrogenase, full insert sequence Length = 4304 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3564 ggtggctcgccgacagccttggatg 3540
>gb|AC011974.11| Homo sapiens, clone RP11-15L5, complete sequence Length = 153168 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Plus Query: 560 caaacccagaccttgaatgaaagct 584 ||||||||| ||||||||||||||| Sbjct: 46719 caaacccagtccttgaatgaaagct 46743
>gb|BC003997.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone IMAGE:3492290), partial cds Length = 1124 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 337 ggtggctcgccgacagccttggatg 313
>dbj|AK008517.1| Mus musculus adult male small intestine cDNA, RIKEN full-length enriched library, clone:2010303G08 product:xanthine dehydrogenase, full insert sequence Length = 1327 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 782 ggtggctcgccgacagccttggatg 758
>dbj|AK090058.1| Mus musculus CRL-2116 JC cDNA, RIKEN full-length enriched library, clone:G430085P04 product:xanthine dehydrogenase, full insert sequence Length = 3747 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 3008 ggtggctcgccgacagccttggatg 2984
>gb|BC032077.1| Mus musculus xanthine dehydrogenase, mRNA (cDNA clone IMAGE:3583596) Length = 2824 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 366 ggtggctctccgacagccttggatg 390 |||||||| |||||||||||||||| Sbjct: 2070 ggtggctcgccgacagccttggatg 2046
>emb|CR391947.13| Zebrafish DNA sequence from clone DKEYP-88A4 in linkage group 1, complete sequence Length = 167207 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 675 aggggtgtcaatctcaacttctgca 699 ||||||||||||||||| ||||||| Sbjct: 63563 aggggtgtcaatctcaatttctgca 63539
>gb|AC107764.11| Mus musculus chromosome 15, clone RP23-179A6, complete sequence Length = 196178 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 gctgtccttgtgtggaaatc 667 |||||||||||||||||||| Sbjct: 17936 gctgtccttgtgtggaaatc 17917
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 693 ttctgcaaatgcggctccat 712 |||||||||||||||||||| Sbjct: 3029212 ttctgcaaatgcggctccat 3029193
>emb|CR774189.10| Zebrafish DNA sequence from clone DKEY-228L14 in linkage group 1, complete sequence Length = 142784 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 37613 cccccattttagctcttcca 37594
>emb|CR954186.2| Medicago truncatula chromosome 5 clone mth2-117e18, COMPLETE SEQUENCE Length = 113233 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 576 atgaaagctccttcaatctg 595 |||||||||||||||||||| Sbjct: 83297 atgaaagctccttcaatctg 83278
>gb|BC055502.1| Danio rerio cDNA clone IMAGE:2643334, partial cds Length = 2508 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ccatggcagccaaacccaga 569 |||||||||||||||||||| Sbjct: 537 ccatggcagccaaacccaga 518
>gb|AC117668.9| Mus musculus, clone RP23-367H12, complete sequence Length = 221526 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gcccttggatttggaacacc 418 |||||||||||||||||||| Sbjct: 111483 gcccttggatttggaacacc 111502
>emb|AL139385.12| Human DNA sequence from clone RP11-90L1 on chromosome 13 Contains the 3' end of the COL4A2 gene for collagen type IV alpha 2, the RAB20 gene for a RAS oncogene family member, a novel gene (FLJ10769 FLJ25038 FLJ14198), the 5' end of a novel gene (FLJ12118) and three CpG islands, complete sequence Length = 177392 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 25 atttgaagtacagtggtatt 44 |||||||||||||||||||| Sbjct: 101955 atttgaagtacagtggtatt 101974
>gb|AC144913.13| Mus musculus chromosome 15, clone RP24-203A19, complete sequence Length = 167647 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 648 gctgtccttgtgtggaaatc 667 |||||||||||||||||||| Sbjct: 41470 gctgtccttgtgtggaaatc 41489
>gb|AC161172.4| Mus musculus chromosome 15, clone RP24-265I13, complete sequence Length = 181782 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 648 gctgtccttgtgtggaaatc 667 |||||||||||||||||||| Sbjct: 179562 gctgtccttgtgtggaaatc 179543
>emb|BX548041.14| Zebrafish DNA sequence from clone CH211-223G17 in linkage group 12, complete sequence Length = 123626 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 42968 cccccattttagctcttcca 42987
>emb|BX465228.8| Zebrafish DNA sequence from clone DKEYP-86F5 in linkage group 16, complete sequence Length = 87633 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 64990 cccccattttagctcttcca 64971
>emb|BX545850.5| Zebrafish DNA sequence from clone RP71-14F13, complete sequence Length = 137836 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 79736 cccccattttagctcttcca 79755
>ref|XM_680350.1| PREDICTED: Danio rerio similar to C9orf89 protein (LOC557314), mRNA Length = 2449 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ccatggcagccaaacccaga 569 |||||||||||||||||||| Sbjct: 531 ccatggcagccaaacccaga 512
>ref|NM_001039601.1| Gallus gallus aldehyde oxidase 2 (LOC424072), mRNA Length = 4593 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 573 tgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 3676 tgaatgaaggccccttcaatctgtcctatatctatagctggatt 3633
>gb|AF345902.1|AF345902 Drosophila mimica xanthine dehydrogenase gene, partial cds Length = 2138 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 585 ccttcaatctggccaatatcaattgctggatt 616 ||||||||||||||||| ||||| || ||||| Sbjct: 2131 ccttcaatctggccaatgtcaatggccggatt 2100
>gb|AF345901.1|AF345901 Drosophila ananassae xanthine dehydrogenase gene, partial cds Length = 2144 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 582 gctccttcaatctggccaatatcaattgctgg 613 |||||||| ||||||||||| || |||||||| Sbjct: 2140 gctccttcgatctggccaatgtcgattgctgg 2109
>emb|BX571849.18| Zebrafish DNA sequence from clone DKEY-185N1 in linkage group 2, complete sequence Length = 128844 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 112474 cccccattttagctcttcca 112455
>emb|BX248521.12| Zebrafish DNA sequence from clone CH211-243C14 in linkage group 23, complete sequence Length = 144888 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 550 ccatggcagccaaacccaga 569 |||||||||||||||||||| Sbjct: 3972 ccatggcagccaaacccaga 3991
>emb|BX649370.5| Zebrafish DNA sequence from clone DKEY-97I11 in linkage group 24, complete sequence Length = 167578 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 86942 cccccattttagctcttcca 86923
>gb|AY034103.1| Poecilia reticulata xanthine dehydrogenase mRNA, complete cds Length = 4657 Score = 40.1 bits (20), Expect = 9.9 Identities = 32/36 (88%) Strand = Plus / Minus Query: 563 acccagaccttgaatgaaagctccttcaatctggcc 598 ||||| ||| || ||||| ||||||||||||||||| Sbjct: 3643 acccaaaccctgcatgaatgctccttcaatctggcc 3608
>gb|BC045390.1| Danio rerio, Similar to RIKEN cDNA 1110007C09 gene, clone IMAGE:2643390, mRNA Length = 2449 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 550 ccatggcagccaaacccaga 569 |||||||||||||||||||| Sbjct: 523 ccatggcagccaaacccaga 504
>gb|AF226973.1|AF226972S2 Drosophila mulleri xanthine dehydrogenase (Xdh) gene, partial exon 3 and partial cds Length = 972 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 585 ccttcaatctggccaatatcaattgctggatt 616 |||||||||||||| |||||||| || ||||| Sbjct: 965 ccttcaatctggccgatatcaatagccggatt 934
>emb|BX004984.6| Zebrafish DNA sequence from clone DKEY-3N4, complete sequence Length = 264738 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 216067 cccccattttagctcttcca 216048
>emb|AL954704.10| Zebrafish DNA sequence from clone DKEY-110K21 in linkage group 7, complete sequence Length = 179095 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 171274 cccccattttagctcttcca 171255
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 264 gccgggttgtcgagggggaa 283 |||||||||||||||||||| Sbjct: 3143781 gccgggttgtcgagggggaa 3143800
>gb|AF093216.1|AF093216 Zaprionus tuberculatus xanthine dehydrogenase (Xdh) gene, partial cds Length = 2153 Score = 40.1 bits (20), Expect = 9.9 Identities = 29/32 (90%) Strand = Plus / Minus Query: 588 tcaatctggccaatatcaattgctggattaat 619 |||||||| ||||| ||||| ||||||||||| Sbjct: 2143 tcaatctgaccaatgtcaatggctggattaat 2112
>emb|BX649295.46| Zebrafish DNA sequence from clone CH211-207C7 in linkage group 22, complete sequence Length = 129991 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 15461 cccccattttagctcttcca 15442
>emb|BX255921.2| Zebrafish DNA sequence from clone CH211-236K19 in linkage group 5, complete sequence Length = 142918 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 124090 cccccattttagctcttcca 124109
>gb|DQ150103.1| Gallus gallus aldehyde oxidase 2 mRNA, complete cds Length = 4593 Score = 40.1 bits (20), Expect = 9.9 Identities = 38/44 (86%) Strand = Plus / Minus Query: 573 tgaatgaaagctccttcaatctggccaatatcaattgctggatt 616 |||||||| || ||||||||||| || ||||| || |||||||| Sbjct: 3676 tgaatgaaggccccttcaatctgtcctatatctatagctggatt 3633
>emb|BX005367.10| Zebrafish DNA sequence from clone DKEY-97L20 in linkage group 22, complete sequence Length = 243709 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 533 cccccattttagctcttcca 552 |||||||||||||||||||| Sbjct: 184440 cccccattttagctcttcca 184459
>emb|CT025523.9| Mouse DNA sequence from clone RP23-73M18 on chromosome 14, complete sequence Length = 200375 Score = 40.1 bits (20), Expect = 9.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 gcccttggatttggaacacc 418 |||||||||||||||||||| Sbjct: 168945 gcccttggatttggaacacc 168964 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,043,563 Number of Sequences: 3902068 Number of extensions: 5043563 Number of successful extensions: 83684 Number of sequences better than 10.0: 78 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 83396 Number of HSP's gapped (non-prelim): 268 length of query: 720 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 697 effective length of database: 17,143,297,704 effective search space: 11948878499688 effective search space used: 11948878499688 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)