>gb|AC105770.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1362_D02,
             complete sequence
          Length = 131860

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                         
Query: 355   tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 414
             ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 80323 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 80264

                                                                         
Query: 415   gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 474
             || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 80263 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 80204

              
Query: 475   a 475
             |
Sbjct: 80203 a 80203



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                
Query: 185   ttcttatgctgcaacaacaaaaccagaatctatcg 219
             |||||||||||||||||| |||| |||||||||||
Sbjct: 80481 ttcttatgctgcaacaac-aaacaagaatctatcg 80448

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                            
Query: 355      tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 414
                ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 22378688 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 22378629

                                                                            
Query: 415      gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 474
                || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 22378628 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 22378569

                 
Query: 475      a 475
                |
Sbjct: 22378568 a 22378568



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                                   
Query: 185      ttcttatgctgcaacaacaaaaccagaatctatcg 219
                |||||||||||||||||| |||| |||||||||||
Sbjct: 22378846 ttcttatgctgcaacaac-aaacaagaatctatcg 22378813

>dbj|AK069936.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023039G20, full
            insert sequence
          Length = 2880

 Score =  129 bits (65), Expect = 1e-26
 Identities = 107/121 (88%)
 Strand = Plus / Minus

                                                                        
Query: 355  tcttcgtcctggaacccctgcttgaagaggtcatagtttgttagctcggctgccttgaag 414
            ||||| ||||||||||| |||||||||||||| ||||| ||| |||||| ||||||||| 
Sbjct: 2597 tcttcatcctggaacccttgcttgaagaggtcgtagttagttggctcggatgccttgaaa 2538

                                                                        
Query: 415  gggcggtctcctaataccctggtcagatcgtcctggtggaggacctccttctcgagcagc 474
            || || ||||||||||||||   || ||||||||||||||||||||||||||| ||||||
Sbjct: 2537 ggccgttctcctaataccctaaccaaatcgtcctggtggaggacctccttctcaagcagc 2478

             
Query: 475  a 475
            |
Sbjct: 2477 a 2477



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 33/35 (94%), Gaps = 1/35 (2%)
 Strand = Plus / Minus

                                               
Query: 185  ttcttatgctgcaacaacaaaaccagaatctatcg 219
            |||||||||||||||||| |||| |||||||||||
Sbjct: 2755 ttcttatgctgcaacaac-aaacaagaatctatcg 2722

>gb|AY106159.1| Zea mays PCO146144 mRNA sequence
          Length = 1581

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 92/107 (85%)
 Strand = Plus / Minus

                                                                        
Query: 379  aagaggtcatagtttgttagctcggctgccttgaaggggcggtctcctaataccctggtc 438
            |||||||| ||||| ||| ||||   ||||||||| || || ||||||| ||||||||| 
Sbjct: 1206 aagaggtcgtagttggttggctccagtgccttgaatggacgttctcctagtaccctggtt 1147

                                                           
Query: 439  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 485
            |||||||||||||| ||||| ||||||||||||||||| || |||||
Sbjct: 1146 agatcgtcctggtgtaggacttccttctcgagcagcaattctgcgat 1100

>ref|NM_190557.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2409

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 439  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 485
            ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 2255 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 2209

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                               
Query: 439      agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 485
                ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 36176162 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 36176208

>dbj|AP003240.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0406G08
          Length = 144233

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                            
Query: 439   agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 485
             ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 53175 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 53221

>dbj|AK100245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056H19, full
            insert sequence
          Length = 2766

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                           
Query: 439  agatcgtcctggtggaggacctccttctcgagcagcaactccgcgat 485
            ||||| ||||||||||| ||||| ||||| ||||||| ||| |||||
Sbjct: 2326 agatcatcctggtggagaacctctttctcaagcagcagctcggcgat 2280

>gb|AC166316.2| Mus musculus chromosome 19, clone RP23-466L5, complete sequence
          Length = 185237

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 127   aataaataaaactggcatgactgat 151
             ||||||||||||||| |||||||||
Sbjct: 81606 aataaataaaactggtatgactgat 81630

>ref|XM_751952.1| Ustilago maydis 521 hypothetical protein (UM00898.1) partial mRNA
          Length = 2583

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 456  gacctccttctcgagcagcaactccgcga 484
            |||||||||||||||||||| || |||||
Sbjct: 2388 gacctccttctcgagcagcagctgcgcga 2360

>dbj|AB234511.1| Uncultured Clostridiales bacterium gene for 16S rRNA, partial
           sequence, clone: MgMjW-48
          Length = 1362

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 90  ggccagctgcggaaagcctag 110
           |||||||||||||||||||||
Sbjct: 195 ggccagctgcggaaagcctag 215

>gb|AC159982.4| Mus musculus chromosome 19, clone RP24-383P9, complete sequence
          Length = 198886

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 127    aataaataaaactggcatgactgat 151
              ||||||||||||||| |||||||||
Sbjct: 126510 aataaataaaactggtatgactgat 126534

>gb|AC122119.11| Mus musculus chromosome 19, clone RP24-252F4, complete sequence
          Length = 183160

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 127   aataaataaaactggcatgactgat 151
             ||||||||||||||| |||||||||
Sbjct: 86813 aataaataaaactggtatgactgat 86789

>emb|AL671875.12| Mouse DNA sequence from clone RP23-296M12 on chromosome X, complete
             sequence
          Length = 192292

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 169   tttatacagtttttacttctt 189
             |||||||||||||||||||||
Sbjct: 38870 tttatacagtttttacttctt 38890

>gb|AC118594.6| Mus musculus chromosome 1, clone RP24-479J20, complete sequence
          Length = 209825

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 373    tgcttgaagaggtcatagtttgtt 396
              |||||| |||||||||||||||||
Sbjct: 111149 tgcttggagaggtcatagtttgtt 111172

>gb|AC122249.4| Mus musculus BAC clone RP23-164F15 from 1, complete sequence
          Length = 207471

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 373    tgcttgaagaggtcatagtttgtt 396
              |||||| |||||||||||||||||
Sbjct: 203925 tgcttggagaggtcatagtttgtt 203948

>emb|X54253.1|MTAS Ascaris suum complete mitochondrial genome
          Length = 14284

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 183  acttcttatgctgcaacaacaaaaccag 210
            ||||||||||||  ||||||||||||||
Sbjct: 4255 acttcttatgctataacaacaaaaccag 4228

>emb|CR376736.5| Zebrafish DNA sequence from clone DKEYP-86G11 in linkage group 24,
             complete sequence
          Length = 204538

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 125   ctaataaataaaactggcatgact 148
             |||| |||||||||||||||||||
Sbjct: 56147 ctaaaaaataaaactggcatgact 56170

>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 469    agcagcaactccgcgataag 488
              ||||||||||||||||||||
Sbjct: 802604 agcagcaactccgcgataag 802623

>gb|AC058822.6| Homo sapiens BAC clone RP11-809N18 from 4, complete sequence
          Length = 170212

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 231   tgccatgtacagctgtgtag 250
             ||||||||||||||||||||
Sbjct: 91013 tgccatgtacagctgtgtag 90994

>gb|AC177808.2| Pan troglodytes BAC clone CH251-703A9 from chromosome unknown,
            complete sequence
          Length = 207792

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 231  tgccatgtacagctgtgtag 250
            ||||||||||||||||||||
Sbjct: 3022 tgccatgtacagctgtgtag 3003

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 461     ccttctcgagcagcaactccgcga 484
               ||||||||||||||| ||||||||
Sbjct: 4928606 ccttctcgagcagcagctccgcga 4928583

>gb|AC169792.2| Rhesus Macaque  BAC CH250-117K11 (Children's Hospital Oakland Research
             Institute Rhesus macaque Adult Male BAC Library) complete
             sequence
          Length = 186393

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   tgccatgtacagctgtgtag 250
             ||||||||||||||||||||
Sbjct: 20044 tgccatgtacagctgtgtag 20063


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,476,050
Number of Sequences: 3902068
Number of extensions: 4476050
Number of successful extensions: 78644
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78512
Number of HSP's gapped (non-prelim): 132
length of query: 502
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 480
effective length of database: 17,147,199,772
effective search space: 8230655890560
effective search space used: 8230655890560
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)