Clone Name | rbasd13f10 |
---|---|
Clone Library Name | barley_pub |
>ref|XM_627368.1| Cryptosporidium parvum Iowa II hypothetical protein (cgd8_4840), partial mRNA Length = 7230 Score = 48.1 bits (24), Expect = 0.013 Identities = 24/24 (100%) Strand = Plus / Minus Query: 186 gaagttgaagttgtagctgttgat 209 |||||||||||||||||||||||| Sbjct: 6802 gaagttgaagttgtagctgttgat 6779
>ref|XM_660787.1| Cryptosporidium hominis TU502 Myb-like DNA-binding domain (Chro.80556) partial mRNA Length = 5922 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 186 gaagttgaagttgtagctgttgatg 210 |||| |||||||||||||||||||| Sbjct: 5524 gaagctgaagttgtagctgttgatg 5500
>emb|CR962120.1|PTB065B04 Pan troglodytes chromosome X BAC PTB-065B04, complete sequence Length = 35005 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 111 attgatgataattaagataaa 131 ||||||||||||||||||||| Sbjct: 24109 attgatgataattaagataaa 24129
>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome Length = 5373180 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 114 gatgataattaagataaagcg 134 ||||||||||||||||||||| Sbjct: 319934 gatgataattaagataaagcg 319914
>gb|AC023702.4| Drosophila melanogaster X BAC RP98-24L2 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 159970 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 agtgtcgaagttgaagttgtagctg 204 ||||||||||||||||||| ||||| Sbjct: 118453 agtgtcgaagttgaagttgaagctg 118429
>gb|AC105150.2| Homo sapiens chromosome 8, clone RP11-328K2, complete sequence Length = 201000 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 60 aagatactacgttgtttcctctcca 84 |||||||||| |||||||||||||| Sbjct: 145781 aagatactaccttgtttcctctcca 145757
>gb|AC130390.4| Drosophila melanogaster X BAC RP98-21O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 184175 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 agtgtcgaagttgaagttgtagctg 204 ||||||||||||||||||| ||||| Sbjct: 59958 agtgtcgaagttgaagttgaagctg 59934
>gb|AE003448.4| Drosophila melanogaster chromosome X, section 32 of 74 of the complete sequence Length = 318665 Score = 42.1 bits (21), Expect = 0.81 Identities = 24/25 (96%) Strand = Plus / Minus Query: 180 agtgtcgaagttgaagttgtagctg 204 ||||||||||||||||||| ||||| Sbjct: 86847 agtgtcgaagttgaagttgaagctg 86823
>emb|AL021046.4|SPAC3G9 S.pombe chromosome I cosmid c3G9 Length = 38096 Score = 40.1 bits (20), Expect = 3.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 63 atactacgttgtttcctctccatc 86 |||||||||||||| ||||||||| Sbjct: 13853 atactacgttgtttactctccatc 13876
>ref|XM_309208.2| Anopheles gambiae str. PEST ENSANGP00000005397 (ENSANGG00000004156), partial mRNA Length = 7809 Score = 40.1 bits (20), Expect = 3.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 agttgtagctgttgatgccg 213 |||||||||||||||||||| Sbjct: 2962 agttgtagctgttgatgccg 2943 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,462,917 Number of Sequences: 3902068 Number of extensions: 1462917 Number of successful extensions: 26379 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 10 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 26357 Number of HSP's gapped (non-prelim): 22 length of query: 248 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 226 effective length of database: 17,147,199,772 effective search space: 3875267148472 effective search space used: 3875267148472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)