ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK072816.1| Oryza sativa (japonica cultivar-group) cDNA clon... 147 5e-32
2gb|BT016771.1| Zea mays clone Contig604 mRNA sequence 139 1e-29
3gb|AY105606.1| Zea mays PCO105510 mRNA sequence 139 1e-29
4gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 geno... 76 2e-10
5dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 76 2e-10
6gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 76 2e-10
7ref|NM_130054.1| Arabidopsis thaliana ubiquitin-protein ligase A... 50 0.009
8ref|XM_470290.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.58
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.58
10gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 44 0.58
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.58
12gb|AF542060.1| Branchiostoma floridae clone 1-1 hepatocyte nucle... 42 2.3
13gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome... 42 2.3
14gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia regio... 42 2.3
15emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chr... 42 2.3
16emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chr... 42 2.3
17gb|AE014181.1| Mus musculus piebald deletion region section 9 of... 42 2.3
18dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
19gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.3
20emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F... 42 2.3
21gb|AC161443.14| Mus musculus chromosome 1, clone RP23-404K2, com... 42 2.3
22gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, comp... 40 9.1
23gb|AC110217.10| Mus musculus chromosome 1, clone RP24-510P18, co... 40 9.1
24gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, co... 40 9.1
25ref|XM_543947.2| PREDICTED: Canis familiaris similar to Slit hom... 40 9.1
26gb|AC123800.4| Mus musculus BAC clone RP24-343K18 from chromosom... 40 9.1
27gb|CP000098.1| Methanosarcina barkeri str. fusaro plasmid 1, com... 40 9.1
28emb|BX324183.9| Human DNA sequence from clone WI2-83857E1 on chr... 40 9.1
29gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, R... 40 9.1
30gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, comp... 40 9.1
31gb|CP000282.1| Saccharophagus degradans 2-40, complete genome 40 9.1
32gb|DP000062.1| Sus scrofa target 117 genomic scaffold 40 9.1
33emb|BX829308.1|CNS0A3JQ Arabidopsis thaliana Full-length cDNA Co... 40 9.1
34gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074... 40 9.1
35ref|XM_565483.1| Anopheles gambiae str. PEST ENSANGP00000026657 ... 40 9.1
36gb|AC106841.11| Mus musculus chromosome 1, clone RP24-554B1, com... 40 9.1
37gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, comp... 40 9.1
38gb|AC140946.1| Gallus gallus BAC clone TAM33-20F15 from chromoso... 40 9.1
39gb|AC162924.5| Mus musculus BAC clone RP23-292J21 from chromosom... 40 9.1 
>dbj|AK072816.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023143J11, full
            insert sequence
          Length = 2296

 Score =  147 bits (74), Expect = 5e-32
 Identities = 215/262 (82%)
 Strand = Plus / Minus

                                                                        
Query: 404  gtccctgcctgatggtgttccagattccgaaggacaattttggcaaacactttggcctca 463
            ||||||| |||||||||||||| ||| |  ||||||||| | ||||| |||||||| || 
Sbjct: 1779 gtccctgtctgatggtgttccaaatttctgaggacaattcttgcaaagactttggcttcg 1720

                                                                        
Query: 464  atggaagctgatgttgctgccgccgctgcacgcaggacccgagctgctcctacattttgc 523
            || ||||| |  || ||||| || ||||| |||| ||| |||||||| ||| | || |||
Sbjct: 1719 atagaagcggtcgtggctgctgctgctgcgcgcaagactcgagctgcccctgctttctgc 1660

                                                                        
Query: 524  agaaggtccgcatggtgtattgcatgtcgacctcctgggattgagaactgaagaagggca 583
            || ||  |||||||||| | ||| || |||||||| ||||||| ||||||||||||||||
Sbjct: 1659 aggagacccgcatggtgcactgcgtgccgacctccagggattgtgaactgaagaagggca 1600

                                                                        
Query: 584  aatgcagcacacgcacgaagaactggcgtaggattgcgaagcatggcaataaatctacca 643
            || |||||||| || ||||||| ||  | |||||| || |||||||||| ||||||| | 
Sbjct: 1599 aaggcagcacaagcgcgaagaattgatgcaggattccggagcatggcaacaaatctagcg 1540

                                  
Query: 644  atctcagcacaactgcatctca 665
            ||||| |||| |||||||||||
Sbjct: 1539 atctcggcaccactgcatctca 1518
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>gb|BT016771.1| Zea mays clone Contig604 mRNA sequence
          Length = 1517

 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                       
Query: 544 tgcatgtcgacctcctgggattgagaactgaagaagggcaaatgcagcacacgcacgaag 603
           |||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 848 tgcatgccgacctcctgggattgtgaactgaagaagggcaaaggcagcacaagcacgaag 789

                                                                       
Query: 604 aactggcgtaggattgcgaagcatggcaataaatctaccaatctcagcacaactgcatct 663
           || ||| | |||||| |||||||||| || |||||||||||||||||  | |||||||||
Sbjct: 788 aattggtgaaggattccgaagcatggaaacaaatctaccaatctcagagcgactgcatct 729

             
Query: 664 ca 665
           ||
Sbjct: 728 ca 727
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>gb|AY105606.1| Zea mays PCO105510 mRNA sequence
          Length = 854

 Score =  139 bits (70), Expect = 1e-29
 Identities = 109/122 (89%)
 Strand = Plus / Minus

                                                                       
Query: 544 tgcatgtcgacctcctgggattgagaactgaagaagggcaaatgcagcacacgcacgaag 603
           |||||| |||||||||||||||| |||||||||||||||||| |||||||| ||||||||
Sbjct: 263 tgcatgccgacctcctgggattgtgaactgaagaagggcaaaggcagcacaagcacgaag 204

                                                                       
Query: 604 aactggcgtaggattgcgaagcatggcaataaatctaccaatctcagcacaactgcatct 663
           || ||| | |||||| ||||||||| ||| |||||||||||||||||  | |||||||||
Sbjct: 203 aattggtgaaggattccgaagcatgacaacaaatctaccaatctcagagcgactgcatct 144

             
Query: 664 ca 665
           ||
Sbjct: 143 ca 142
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>gb|AC084763.4| Oryza sativa chromosome 10 BAC OSJNBa0027P10 genomic sequence, complete
             sequence
          Length = 141307

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                         
Query: 404   gtccctgcctgatggtgttccagattccgaaggacaattttggcaaacactttggcctca 463
             ||||||| |||||||||||||| ||| |  ||||||||| | ||||| |||||||| || 
Sbjct: 23250 gtccctgtctgatggtgttccaaatttctgaggacaattcttgcaaagactttggcttcg 23309

                                                                         
Query: 464   atggaagctgatgttgctgccgccgctgcacgcaggacccgagctgctcctacattttgc 523
             || ||||| |  || ||||| || ||||| |||| ||| |||||||| ||| | || |||
Sbjct: 23310 atagaagcggtcgtggctgctgctgctgcgcgcaagactcgagctgcccctgctttctgc 23369

                                                               
Query: 524   agaaggtccgcatggtgtattgcatgtcgacctcctgggattgagaactg 573
             || ||  |||||||||| | ||| || |||||||| ||||||| ||||||
Sbjct: 23370 aggagacccgcatggtgcactgcgtgccgacctccagggattgtgaactg 23419



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                         
Query: 571   ctgaagaagggcaaatgcagcacacgcacgaagaactggcgtaggattgcgaagcatggc 630
             ||||||||||||||| |||||||| || ||||||| ||  | |||||| || ||||||||
Sbjct: 23741 ctgaagaagggcaaaggcagcacaagcgcgaagaattgatgcaggattccggagcatggc 23800

                                         
Query: 631   aataaatctaccaatctcagcacaactg 658
             || ||||||| | ||||| |||| ||||
Sbjct: 23801 aacaaatctagcgatctcggcaccactg 23828
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                            
Query: 404      gtccctgcctgatggtgttccagattccgaaggacaattttggcaaacactttggcctca 463
                ||||||| |||||||||||||| ||| |  ||||||||| | ||||| |||||||| || 
Sbjct: 21708567 gtccctgtctgatggtgttccaaatttctgaggacaattcttgcaaagactttggcttcg 21708626

                                                                            
Query: 464      atggaagctgatgttgctgccgccgctgcacgcaggacccgagctgctcctacattttgc 523
                || ||||| |  || ||||| || ||||| |||| ||| |||||||| ||| | || |||
Sbjct: 21708627 atagaagcggtcgtggctgctgctgctgcgcgcaagactcgagctgcccctgctttctgc 21708686

                                                                  
Query: 524      agaaggtccgcatggtgtattgcatgtcgacctcctgggattgagaactg 573
                || ||  |||||||||| | ||| || |||||||| ||||||| ||||||
Sbjct: 21708687 aggagacccgcatggtgcactgcgtgccgacctccagggattgtgaactg 21708736



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                            
Query: 571      ctgaagaagggcaaatgcagcacacgcacgaagaactggcgtaggattgcgaagcatggc 630
                ||||||||||||||| |||||||| || ||||||| ||  | |||||| || ||||||||
Sbjct: 21709058 ctgaagaagggcaaaggcagcacaagcgcgaagaattgatgcaggattccggagcatggc 21709117

                                            
Query: 631      aataaatctaccaatctcagcacaactg 658
                || ||||||| | ||||| |||| ||||
Sbjct: 21709118 aacaaatctagcgatctcggcaccactg 21709145
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 75.8 bits (38), Expect = 2e-10
 Identities = 137/170 (80%)
 Strand = Plus / Plus

                                                                            
Query: 404      gtccctgcctgatggtgttccagattccgaaggacaattttggcaaacactttggcctca 463
                ||||||| |||||||||||||| ||| |  ||||||||| | ||||| |||||||| || 
Sbjct: 21720230 gtccctgtctgatggtgttccaaatttctgaggacaattcttgcaaagactttggcttcg 21720289

                                                                            
Query: 464      atggaagctgatgttgctgccgccgctgcacgcaggacccgagctgctcctacattttgc 523
                || ||||| |  || ||||| || ||||| |||| ||| |||||||| ||| | || |||
Sbjct: 21720290 atagaagcggtcgtggctgctgctgctgcgcgcaagactcgagctgcccctgctttctgc 21720349

                                                                  
Query: 524      agaaggtccgcatggtgtattgcatgtcgacctcctgggattgagaactg 573
                || ||  |||||||||| | ||| || |||||||| ||||||| ||||||
Sbjct: 21720350 aggagacccgcatggtgcactgcgtgccgacctccagggattgtgaactg 21720399



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 74/88 (84%)
 Strand = Plus / Plus

                                                                            
Query: 571      ctgaagaagggcaaatgcagcacacgcacgaagaactggcgtaggattgcgaagcatggc 630
                ||||||||||||||| |||||||| || ||||||| ||  | |||||| || ||||||||
Sbjct: 21720721 ctgaagaagggcaaaggcagcacaagcgcgaagaattgatgcaggattccggagcatggc 21720780

                                            
Query: 631      aataaatctaccaatctcagcacaactg 658
                || ||||||| | ||||| |||| ||||
Sbjct: 21720781 aacaaatctagcgatctcggcaccactg 21720808
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>ref|NM_130054.1| Arabidopsis thaliana ubiquitin-protein ligase AT2G44900 mRNA,
            complete cds
          Length = 2793

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 46/53 (86%)
 Strand = Plus / Minus

                                                                 
Query: 542  attgcatgtcgacctcctgggattgagaactgaagaagggcaaatgcagcaca 594
            |||||||||||||| || || ||||  ||||||||||| ||||| ||||||||
Sbjct: 2645 attgcatgtcgaccacccggtattgtaaactgaagaagcgcaaacgcagcaca 2593



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 634  aaatctaccaatctcagcacaactgcatctca 665
            |||||| ||||| ||||||| |||||||||||
Sbjct: 2553 aaatcttccaatttcagcaccactgcatctca 2522
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>ref|XM_470290.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1611

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 261 cagttctccttgagcagcagct 282
           ||||||||||||||||||||||
Sbjct: 80  cagttctccttgagcagcagct 59
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 261     cagttctccttgagcagcagct 282
               ||||||||||||||||||||||
Sbjct: 3688374 cagttctccttgagcagcagct 3688395
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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
             sequence
          Length = 160738

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 261   cagttctccttgagcagcagct 282
             ||||||||||||||||||||||
Sbjct: 93003 cagttctccttgagcagcagct 92982
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 261     cagttctccttgagcagcagct 282
               ||||||||||||||||||||||
Sbjct: 3688485 cagttctccttgagcagcagct 3688506
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>gb|AF542060.1| Branchiostoma floridae clone 1-1 hepatocyte nuclear factor 1 mRNA,
            complete cds
          Length = 4631

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 466  ggaagctgatgttgctgccgccgctgcac 494
            |||||||||||||||||| || |||||||
Sbjct: 1051 ggaagctgatgttgctgctgctgctgcac 1023
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>gb|AC138716.2| Mus musculus BAC clone RP23-241B5 from chromosome 14, complete sequence
          Length = 167083

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 89    caacagataacaaacactctt 109
             |||||||||||||||||||||
Sbjct: 27337 caacagataacaaacactctt 27357
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>gb|AE014305.1| Homo sapiens chromosome 13q34 schizophrenia region contig 1 section 2
             of 11 of the complete sequence
          Length = 613322

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 508   tgctcctacattttgcagaag 528
             |||||||||||||||||||||
Sbjct: 33056 tgctcctacattttgcagaag 33036
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>emb|AL445188.5| Human DNA sequence from clone RP11-260E14 on chromosome 13, complete
             sequence
          Length = 164061

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 508   tgctcctacattttgcagaag 528
             |||||||||||||||||||||
Sbjct: 93154 tgctcctacattttgcagaag 93134
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>emb|AL355595.10| Human DNA sequence from clone RP11-276G3 on chromosome 13 Contains a
              novel gene and a novel pseudogene, complete sequence
          Length = 119343

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 89     caacagataacaaacactctt 109
              |||||||||||||||||||||
Sbjct: 114405 caacagataacaaacactctt 114385
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>gb|AE014181.1| Mus musculus piebald deletion region section 9 of 11 of the complete
             sequence
          Length = 400029

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 89    caacagataacaaacactctt 109
             |||||||||||||||||||||
Sbjct: 76241 caacagataacaaacactctt 76221
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 118      atataccataaaagttctcta 138
                |||||||||||||||||||||
Sbjct: 16189018 atataccataaaagttctcta 16189038
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 118      atataccataaaagttctcta 138
                |||||||||||||||||||||
Sbjct: 16142251 atataccataaaagttctcta 16142271
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>emb|BX649219.2|CNS09SBY Oryza sativa chromosome 12, . BAC B1097F04 of chromosome 12 of cultivar
             Nipponbare of ssp. japonica of Oryza sativa (rice),
             complete sequence
          Length = 165955

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 118   atataccataaaagttctcta 138
             |||||||||||||||||||||
Sbjct: 54325 atataccataaaagttctcta 54305
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>gb|AC161443.14| Mus musculus chromosome 1, clone RP23-404K2, complete sequence
          Length = 186144

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 164   cttataagttacttttacaca 184
             |||||||||||||||||||||
Sbjct: 97515 cttataagttacttttacaca 97495
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>gb|AC110036.8| Mus musculus chromosome 7, clone RP23-254F9, complete sequence
          Length = 185681

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 645    tctcagcacaactgcatctc 664
              ||||||||||||||||||||
Sbjct: 116270 tctcagcacaactgcatctc 116289
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>gb|AC110217.10| Mus musculus chromosome 1, clone RP24-510P18, complete sequence
          Length = 132882

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 183   catcagacagacaacaggaa 202
             ||||||||||||||||||||
Sbjct: 26351 catcagacagacaacaggaa 26332
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>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence
          Length = 195598

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  gcctcaatggaagctgatgt 477
            ||||||||||||||||||||
Sbjct: 1924 gcctcaatggaagctgatgt 1905
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>ref|XM_543947.2| PREDICTED: Canis familiaris similar to Slit homolog 1 protein
            precursor (Slit-1) (Multiple epidermal growth factor-like
            domains 4) (LOC486818), mRNA
          Length = 4461

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  ggacaattttggcaaacact 454
            ||||||||||||||||||||
Sbjct: 3666 ggacaattttggcaaacact 3685
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>gb|AC123800.4| Mus musculus BAC clone RP24-343K18 from chromosome 1, complete sequence
          Length = 177367

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 183    catcagacagacaacaggaa 202
              ||||||||||||||||||||
Sbjct: 155891 catcagacagacaacaggaa 155872
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>gb|CP000098.1| Methanosarcina barkeri str. fusaro plasmid 1, complete sequence
          Length = 36358

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 176   ttttacacatcagacagaca 195
             ||||||||||||||||||||
Sbjct: 18798 ttttacacatcagacagaca 18779
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>emb|BX324183.9| Human DNA sequence from clone WI2-83857E1 on chromosome 22, complete
             sequence
          Length = 16216

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 405   tccctgcctgatggtgttccagat 428
             ||||| ||||||||||||||||||
Sbjct: 12900 tccctccctgatggtgttccagat 12923
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>gb|AC091158.11| Mus musculus Strain C57BL6/J chromosome 6 BAC, RP23-109E8, Complete
             Sequence, complete sequence
          Length = 195048

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   tgcagaaggtccgcatggtg 540
             ||||||||||||||||||||
Sbjct: 25697 tgcagaaggtccgcatggtg 25678
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>gb|AC161929.4| Mus musculus chromosome 7, clone RP23-120D7, complete sequence
          Length = 193326

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 645    tctcagcacaactgcatctc 664
              ||||||||||||||||||||
Sbjct: 169633 tctcagcacaactgcatctc 169652
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>gb|CP000282.1| Saccharophagus degradans 2-40, complete genome
          Length = 5057531

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 174     acttttacacatcagacaga 193
               ||||||||||||||||||||
Sbjct: 2570821 acttttacacatcagacaga 2570840
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>gb|DP000062.1| Sus scrofa target 117 genomic scaffold
          Length = 605739

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 183    catcagacagacaacaggaatatt 206
              ||||||||||||||||| ||||||
Sbjct: 498662 catcagacagacaacagtaatatt 498685
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>emb|BX829308.1|CNS0A3JQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL90ZB04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 331

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 79  taaattaaaccaacagataacaaa 102
           ||||||||||| ||||||||||||
Sbjct: 261 taaattaaaccgacagataacaaa 238
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>gb|AC117176.2| Dictyostelium discoideum chromosome 2 map 5018074-5200947 strain AX4,
             complete sequence
          Length = 182871

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 11    tataaagttttacatgtatg 30
             ||||||||||||||||||||
Sbjct: 41683 tataaagttttacatgtatg 41702
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>ref|XM_565483.1| Anopheles gambiae str. PEST ENSANGP00000026657
           (ENSANGG00000024320), partial mRNA
          Length = 1305

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 475 tgttgctgccgccgctgcac 494
           ||||||||||||||||||||
Sbjct: 610 tgttgctgccgccgctgcac 591
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>gb|AC106841.11| Mus musculus chromosome 1, clone RP24-554B1, complete sequence
          Length = 165972

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 255   gtctgacagttctccttgagcagc 278
             ||||||||| ||||||||||||||
Sbjct: 62348 gtctgacagatctccttgagcagc 62371
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>gb|AC164373.4| Mus musculus chromosome 1, clone RP23-36O22, complete sequence
          Length = 171278

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 458    gcctcaatggaagctgatgt 477
              ||||||||||||||||||||
Sbjct: 113583 gcctcaatggaagctgatgt 113564
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>gb|AC140946.1| Gallus gallus BAC clone TAM33-20F15 from chromosome ul, complete
             sequence
          Length = 156730

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 86    aaccaacagataacaaacac 105
             ||||||||||||||||||||
Sbjct: 87274 aaccaacagataacaaacac 87255
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>gb|AC162924.5| Mus musculus BAC clone RP23-292J21 from chromosome 6, complete sequence
          Length = 179209

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 521   tgcagaaggtccgcatggtg 540
             ||||||||||||||||||||
Sbjct: 93718 tgcagaaggtccgcatggtg 93699


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,831,311
Number of Sequences: 3902068
Number of extensions: 5831311
Number of successful extensions: 125334
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125027
Number of HSP's gapped (non-prelim): 307
length of query: 665
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 642
effective length of database: 17,143,297,704
effective search space: 11005997125968
effective search space used: 11005997125968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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