ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13f02
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1CWC25_SCHPO (Q9Y805) Pre-mRNA-splicing factor cwc25 (Complexed w... 40 0.006
2RPTN_HUMAN (Q6XPR3) Repetin 39 0.014
3CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25 39 0.014
4RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-ri... 39 0.025
5PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helica... 38 0.032
6SNWA_DICDI (P54705) Protein snwA 38 0.042
7TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi... 37 0.055
8YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B04... 37 0.055
9PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 ... 37 0.055
10PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helica... 37 0.072
11K0853_HUMAN (Q5T200) Protein KIAA0853 37 0.072
12IWS1_HUMAN (Q96ST2) IWS1-like protein 36 0.16
13PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helica... 36 0.16
14CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity fa... 36 0.16
15RPTN_MOUSE (P97347) Repetin 35 0.27
16RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-bindin... 35 0.27
17U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 aux... 35 0.27
18HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34) 35 0.27
19CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25 35 0.36
20SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2 35 0.36
21AN32A_HUMAN (P39687) Acidic leucine-rich nuclear phosphoprotein ... 35 0.36
22CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25 35 0.36
23DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-... 35 0.36
24DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC... 35 0.36
25DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (... 35 0.36
26DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (... 35 0.36
27DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (... 35 0.36
28CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25 34 0.46
29PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helica... 34 0.46
30CWC25_USTMA (Q4P6I3) Pre-mRNA-splicing factor CWC25 34 0.46
31RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytoki... 34 0.46
32YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear pro... 34 0.61
33RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-ri... 34 0.61
34RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U... 34 0.61
35YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear pro... 34 0.61
36SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2 33 0.79
37U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 aux... 33 0.79
38PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helica... 33 0.79
39FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1... 33 1.0
40DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-... 33 1.0
41SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot pr... 33 1.0
42STC_DROME (P40798) Protein shuttle craft 33 1.0
43SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (... 33 1.0
44YEMA_DROME (P25992) Yemanuclein-alpha 33 1.3
45CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpresse... 33 1.3
46SRP2_SCHPO (P78814) Pre-mRNA-splicing factor srp2 32 1.8
47NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD p... 32 1.8
48DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-depend... 32 1.8
49CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity fa... 32 1.8
50ELOA1_DROME (Q9VCP0) Transcription elongation factor B polypepti... 32 1.8
51PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 1.8
52CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity fa... 32 1.8
53CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity fa... 32 1.8
54CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity fa... 32 1.8
55CLK4_MOUSE (O35493) Dual specificity protein kinase CLK4 (EC 2.7... 32 1.8
56MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-depend... 32 1.8
57AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32... 32 1.8
58AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein ... 32 1.8
59CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity fa... 32 2.3
60NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD p... 32 2.3
61PDPK1_DROME (Q9W0V1) 3-phosphoinositide-dependent protein kinase... 32 2.3
62CWC25_GIBZE (Q4IRI9) Pre-mRNA-splicing factor CWC25 32 2.3
63PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helica... 32 2.3
64IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B ... 32 2.3
65IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B ... 32 2.3
66PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 3.0
67YOD2_CAEEL (P34594) Hypothetical protein ZC262.2 32 3.0
68RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytoki... 32 3.0
69NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein ... 32 3.0
70YHO0_YEAST (P38800) Hypothetical 149.7 kDa protein in IRE1-KSP1 ... 32 3.0
71YP68_CAEEL (Q09217) Hypothetical protein B0495.8 32 3.0
72PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 ... 32 3.0
73CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator... 31 3.9
74CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alph... 31 3.9
75RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.... 31 3.9
76CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpresse... 31 3.9
77CROP_HUMAN (O95232) Cisplatin resistance-associated overexpresse... 31 3.9
78CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpresse... 31 3.9
79HS90A_BRARE (Q90474) Heat shock protein HSP 90-alpha 31 3.9
80CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel al... 31 3.9
81CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel al... 31 3.9
82CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator... 31 3.9
83RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U... 31 3.9
84MSS4_YEAST (P38994) Probable phosphatidylinositol-4-phosphate 5-... 31 5.1
85ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in... 31 5.1
86PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 ... 31 5.1
87CLK4_HUMAN (Q9HAZ1) Dual specificity protein kinase CLK4 (EC 2.7... 31 5.1
88MAAZ3_SCHCO (P37937) Mating-type protein A-alpha Z3 31 5.1
89SECA_STAES (Q8CPZ2) Preprotein translocase secA subunit 30 6.7
90SECA_STAEQ (Q5HQX6) Preprotein translocase secA subunit 30 6.7
91WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11) 30 6.7
92BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain ... 30 6.7
93DEM1_PHYSA (P05422) Dermorphin-1 precursor [Contains: Deltorphin... 30 6.7
94NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2 30 6.7
95CCD93_MOUSE (Q7TQK5) Coiled-coil domain-containing protein 93 30 6.7
96YO87_CAEEL (P34623) Hypothetical protein ZK1236.7 30 6.7
97CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator... 30 6.7
98MDFI_HUMAN (Q99750) MyoD family inhibitor (Myogenic repressor I-mf) 30 8.7
99RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U... 30 8.7
100IWS1A_XENLA (Q6DE96) IWS1-like protein A 30 8.7
101SECA_STAAW (Q7A1G4) Preprotein translocase secA subunit 30 8.7
102SECA_STAAU (O06446) Preprotein translocase secA subunit 30 8.7
103SECA_STAAS (Q6GB77) Preprotein translocase secA subunit 30 8.7
104SECA_STAAR (Q6GIN8) Preprotein translocase secA subunit 30 8.7
105SECA_STAAN (Q7A6R5) Preprotein translocase secA subunit 30 8.7
106SECA_STAAM (Q99VM2) Preprotein translocase secA subunit 30 8.7
107SECA_STAAC (Q5HHR7) Preprotein translocase secA subunit 30 8.7
108NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2 30 8.7
109YG5W_YEAST (P53335) Hypothetical 31.3 kDa protein in TAF145-YOR1... 30 8.7
110PBPA_BACSU (P39793) Penicillin-binding protein 1A/1B (PBP1) [Inc... 30 8.7
111FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1... 30 8.7
112FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1... 30 8.7
113YR748_MIMIV (Q5UP04) Putative ankyrin repeat protein R748 30 8.7
114SYE_HAEIN (P43818) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Gluta... 30 8.7
115SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130 (... 30 8.7
116IFH1_YEAST (P39520) Protein IFH1 (Protein RRP3) 30 8.7
117DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111... 30 8.7
118CEA3_ECOLI (P00646) Colicin-E3 (EC 3.1.-.-) (Colicin-E3 A chain)... 30 8.7
119AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Ad... 30 8.7
120IWS1_RAT (Q3SWT4) IWS1-like protein 30 8.7 
>CWC25_SCHPO (Q9Y805) Pre-mRNA-splicing factor cwc25 (Complexed with cdc5|
           protein 25) (Cell cycle control protein cwf25)
          Length = 376

 Score = 40.4 bits (93), Expect = 0.006
 Identities = 27/84 (32%), Positives = 38/84 (45%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           DS RK  E R+    +R + D +R+R  +E +   K   S R   N     D  N   +T
Sbjct: 162 DSDRKSKERRHRDRHHRSNQDRSRERSDNEQHSSDKREHSRRSYRN-----DRNNWRERT 216

Query: 512 HEEYGRHRARYSDSHDSKRSRYDD 441
           H +  RHR +Y   +  K   YDD
Sbjct: 217 HNDRYRHRDKYDSGYFKK--HYDD 238
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>RPTN_HUMAN (Q6XPR3) Repetin|
          Length = 784

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 18/47 (38%), Positives = 27/47 (57%)
 Frame = -2

Query: 629 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 489
           + RDR+THE    H+ RD   ++   NR    + RDR+THE+   H+
Sbjct: 741 QRRDRQTHEHEQSHQRRDRQTHEDKQNR----QRRDRQTHEDEQNHQ 783



 Score = 37.0 bits (84), Expect = 0.072
 Identities = 16/57 (28%), Positives = 32/57 (56%)
 Frame = -2

Query: 623 RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 453
           +DR+TH+D   H+ RD   ++   +     + RDR+THE+    + R   +H+ +++
Sbjct: 729 QDRRTHKDEQNHQRRDRQTHEHEQSH----QRRDRQTHEDKQNRQRRDRQTHEDEQN 781
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>CWC25_EMENI (Q5B0I1) Pre-mRNA-splicing factor cwc25|
          Length = 415

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 13/81 (16%)
 Frame = -2

Query: 671 EDRYDPNANRLSD-------DENRDRKTHEDYGRHKTRDSDRYDPNANRLSD------DE 531
           ++RYD  A R +        D+ RDR   +DY R +   S R D  ++R  D      D 
Sbjct: 253 DERYDRAARRSASPRPDRRRDDRRDRDQDQDYRRDRNSRSSRRDARSSRDRDTDAFGRDR 312

Query: 530 NRDRKTHEEYGRHRARYSDSH 468
           NRDR +H   G   A  +D H
Sbjct: 313 NRDRGSHSRNGNADAN-ADQH 332
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>RSP7_CAEEL (O01159) Probable splicing factor, arginine/serine-rich 7 (p54)|
          Length = 452

 Score = 38.5 bits (88), Expect = 0.025
 Identities = 29/82 (35%), Positives = 38/82 (46%), Gaps = 3/82 (3%)
 Frame = -2

Query: 686 RRKVGEDR---YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 516
           RR+   DR    D +  R  D  +R R    D  R ++R  DR     +R  D+++RDRK
Sbjct: 288 RRRDSRDRDRDRDRDRRRSRDRRSRSRDRDRDRDRKRSRSRDR--KRRSRSRDNKDRDRK 345

Query: 515 THEEYGRHRARYSDSHDSKRSR 450
                 R R R S S D KR R
Sbjct: 346 --RSRSRDRRRRSKSRDRKRER 365
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>PRP5_CRYNE (Q5KME7) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1072

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 23/72 (31%), Positives = 33/72 (45%)
 Frame = -2

Query: 659 DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY 480
           D  A+R  DD +RDR+   +  R +TRD    D +      D  RD+  + +  R R R 
Sbjct: 35  DRKASRYDDDYSRDRERDRERERDRTRDYRDRDRDY-----DRRRDKDRYRDDDRDRRRR 89

Query: 479 SDSHDSKRSRYD 444
            D  D +R   D
Sbjct: 90  DDKDDRRREERD 101



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 19/58 (32%), Positives = 28/58 (48%)
 Frame = -2

Query: 647 NRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 474
           +R  D  +RDR    DY R + +D  R D    R  DD++  R+   + G  R R S+
Sbjct: 58  DRTRDYRDRDR----DYDRRRDKDRYRDDDRDRRRRDDKDDRRREERDRGSDRKRDSE 111



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
 Frame = -2

Query: 692 DSRRKVGEDRY--DPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDP 558
           D  R+  +DRY  D    R  DD++  R+   D G  + RDS+R  P
Sbjct: 69  DYDRRRDKDRYRDDDRDRRRRDDKDDRRREERDRGSDRKRDSERRSP 115
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>SNWA_DICDI (P54705) Protein snwA|
          Length = 685

 Score = 37.7 bits (86), Expect = 0.042
 Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = -2

Query: 683 RKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR--KTH 510
           RK   D  + N N  S DE+++++T     R ++R ++R  P+ N   DD++R R     
Sbjct: 365 RKDNSDSDNDNDNDSSSDEDKNKRTPPMNRRSRSRSTERI-PSRNDNDDDDDRYRIKDNR 423

Query: 509 EEYGRHRARYSDSHDSKRSR 450
           +  GR      D+ DS+ SR
Sbjct: 424 DNRGRDNIDSRDNRDSRDSR 443



 Score = 36.2 bits (82), Expect = 0.12
 Identities = 27/86 (31%), Positives = 36/86 (41%), Gaps = 1/86 (1%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDS-DRYDPNANRLSDDENRDRK 516
           D+R   G D  D   NR S D    R + +      +RD+ D  D   NR  + +NR R 
Sbjct: 421 DNRDNRGRDNIDSRDNRDSRDSRDSRDSRDSRDSRDSRDNRDSRDSRDNR-DNRDNRRRD 479

Query: 515 THEEYGRHRARYSDSHDSKRSRYDDS 438
              +  R+  R SDS     S   DS
Sbjct: 480 DSNDRDRYSKRRSDSDSDSDSDSSDS 505



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
 Frame = -2

Query: 671 EDRYDPNANRLSDDENRDRK--THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYG 498
           ++R      +L++D   +R     + Y R    DSD  + N N  S DE+++++T     
Sbjct: 337 KERKQDMLRKLAEDVRNERSGIIQQRYTRKDNSDSD--NDNDNDSSSDEDKNKRTPPMNR 394

Query: 497 RHRARYSDSHDSKRSRYDD 441
           R R+R ++   S+    DD
Sbjct: 395 RSRSRSTERIPSRNDNDDD 413
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>TOP1_XENLA (P41512) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
          Length = 829

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 20/72 (27%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
 Frame = -2

Query: 659 DPNANRLSDD-ENRDRKTHEDYGRHKTRDSDRY-DPNANRLSDDEN---RDRKTHEEYGR 495
           DP+  +  D  +N D+   +D  +H+ RD +++ D N  +  D E    +D + H+E  +
Sbjct: 53  DPSEKKHKDKHKNNDKHREKDGEKHRERDGEKHRDKNGEKHRDGEKHKEKDIEKHKEVEK 112

Query: 494 HRARYSDSHDSK 459
           HR +  + H  K
Sbjct: 113 HRVKDGEKHKEK 124



 Score = 33.5 bits (75), Expect = 0.79
 Identities = 18/86 (20%), Positives = 38/86 (44%), Gaps = 3/86 (3%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDEN---RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 516
           R + GE   D N  +  D E    +D + H++  +H+ +D +++      +   + +D +
Sbjct: 78  RERDGEKHRDKNGEKHRDGEKHKEKDIEKHKEVEKHRVKDGEKH--KEKDVEKHKEKDVE 135

Query: 515 THEEYGRHRARYSDSHDSKRSRYDDS 438
            H +  +H+ R  D    K  +   S
Sbjct: 136 KHRDGEKHKHRDKDREKKKEEKMKSS 161
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>YP62_CAEEL (Q09437) Putative serine/threonine-protein kinase B0495.2 (EC|
           2.7.11.1)
          Length = 719

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 33/104 (31%), Positives = 41/104 (39%), Gaps = 20/104 (19%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDS--------DRYD---PNANRL 543
           S+RK  E   D    R S      +K  ED  R K RD         DR D   P+A + 
Sbjct: 53  SKRKNSESDDDTTEQRFSIQPKNAQKAKEDRYRDKERDKKREKDKRDDRRDVRGPDARQK 112

Query: 542 SDD-------ENRDRKTHE--EYGRHRARYSDSHDSKRSRYDDS 438
             D         RD+K HE   +  HR   +D H + RS  D S
Sbjct: 113 DRDFKGRQERSGRDQKVHEHRHHHHHRKHETDGHRTNRSNRDRS 156



 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/91 (26%), Positives = 42/91 (46%), Gaps = 6/91 (6%)
 Frame = -2

Query: 692 DSRRKV-GED--RYDPNANRLSDDENRDRKTHE--DYGRHKTRDSDRYDPNANRLSDDEN 528
           D RR V G D  + D +     +   RD+K HE   +  H+  ++D +  N +       
Sbjct: 99  DDRRDVRGPDARQKDRDFKGRQERSGRDQKVHEHRHHHHHRKHETDGHRTNRSNRDRSSE 158

Query: 527 RDRKTHEEY-GRHRARYSDSHDSKRSRYDDS 438
           RD + H+ +  RH+   + S D+ +S +  S
Sbjct: 159 RDSEKHKRHIDRHKKSSTTSPDNDKSPHKKS 189
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>PPIL4_NEUCR (Q871A4) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 494

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 30/88 (34%), Positives = 42/88 (47%), Gaps = 3/88 (3%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN---RD 522
           DSR  VG  R D + +R S    RDR   +D      RD+ R   +A+R  DD +   RD
Sbjct: 405 DSRPDVGGGR-DRSTSRRSRSPRRDRDRRDD------RDNRRGPRDADRRRDDRDLDRRD 457

Query: 521 RKTHEEYGRHRARYSDSHDSKRSRYDDS 438
           R+      R+R R  +  D +R R  D+
Sbjct: 458 RRGDRSRDRYRDRDYNDRDHRRGRDRDN 485
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>PRP5_ASPFU (Q4WT99) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1211

 Score = 37.0 bits (84), Expect = 0.072
 Identities = 27/78 (34%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
 Frame = -2

Query: 665 RYDPNANRLSD--DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 492
           R D + +R  D  DE+  R +  D  R + R  DR         DD +  RK+ E    +
Sbjct: 61  RRDRSVDRRDDHRDEDSYRSSRRDRSRDRRRSRDR--------GDDRDHRRKSRER--DY 110

Query: 491 RARYSDSHDSKRSRYDDS 438
           R+R  DS D  R R DDS
Sbjct: 111 RSRRDDSRDRARRRTDDS 128
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>K0853_HUMAN (Q5T200) Protein KIAA0853|
          Length = 1668

 Score = 37.0 bits (84), Expect = 0.072
 Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
 Frame = -2

Query: 692 DSRRKVGE-DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 516
           D RR+    DR D   +  + + +R+R+   +  R + R+ DR       L  +  R+R+
Sbjct: 657 DERREERRVDRVDDRRDERARERDRERERDRERERERERERDREREKERELERERARERE 716

Query: 515 THEEYGRHRARYSD-SHDSKRSR 450
              E  R R R  D  HD +R R
Sbjct: 717 REREKERDRERDRDRDHDRERER 739



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/64 (26%), Positives = 31/64 (48%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRS 453
           D +R+R+   +  R K R+ +R +    R   +  R+R+   E  R RAR  D    ++ 
Sbjct: 732 DHDRERERERERDREKEREREREERERER---ERERERERERERERERARERDKERERQR 788

Query: 452 RYDD 441
            ++D
Sbjct: 789 DWED 792
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>IWS1_HUMAN (Q96ST2) IWS1-like protein|
          Length = 819

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 14/90 (15%)
 Frame = -2

Query: 659 DPNANRLSDDENRDR-------KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTH--- 510
           +P   R+SD E+ +           E+  RH+  DS+  +    R+SD E+ D   H   
Sbjct: 202 EPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQAS 261

Query: 509 ----EEYGRHRARYSDSHDSKRSRYDDSYN 432
               EE  + R   S+S D  R++  DS N
Sbjct: 262 DSENEELPKPRISDSESEDPPRNQASDSEN 291



 Score = 33.5 bits (75), Expect = 0.79
 Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 7/85 (8%)
 Frame = -2

Query: 671 EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRD-------RKT 513
           ED   P   ++SD E+      E+  RH+  DS+  +P   R+SD E+ +          
Sbjct: 175 EDALKP---QISDSES------EEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSE 225

Query: 512 HEEYGRHRARYSDSHDSKRSRYDDS 438
            EE  RH+A  S++ +  + R  DS
Sbjct: 226 SEEPPRHQASDSENEELPKPRISDS 250



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 7/74 (9%)
 Frame = -2

Query: 638 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR-------KTHEEYGRHRARY 480
           SD EN      ED G+H   DS+  +   +  SD E  D           EE  RH+A  
Sbjct: 144 SDSEN------EDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASD 197

Query: 479 SDSHDSKRSRYDDS 438
           S++ +  + R  DS
Sbjct: 198 SENEEPPKPRMSDS 211
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>PRP5_ASPOR (Q2U2J6) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1186

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 30/91 (32%), Positives = 35/91 (38%), Gaps = 8/91 (8%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDE--NRDRKT 513
           R +  E RY            RDR       R   RD D Y P+    S D   +RDR  
Sbjct: 43  RSRSPEKRYRDRERDRDSYRRRDRSLDR---RADYRDEDTYRPSRRDRSRDRRRSRDRDD 99

Query: 512 HEEYGRH------RARYSDSHDSKRSRYDDS 438
             +Y R       R+R  DS D  R R DDS
Sbjct: 100 DRDYRRRSRDRDFRSRRDDSRDRARRRTDDS 130
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>CPSF6_BRARE (Q6NWC6) Cleavage and polyadenylation specificity factor 6|
          Length = 545

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -2

Query: 629 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 489
           ++R R  HEDY R ++R+ DR+         D  RDR+   EY RHR
Sbjct: 504 KSRSRDRHEDYYRERSRERDRH----RERDRDRERDREREREY-RHR 545
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>RPTN_MOUSE (P97347) Repetin|
          Length = 1130

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 10/83 (12%)
 Frame = -2

Query: 674  GEDRY-DPNANRLSDDEN----RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTH 510
            GE+ Y D + + + D EN    ++ +THE+   H+T D   +    N+    + + R+TH
Sbjct: 964  GEEEYQDWDRHSVEDQENLYEMQNWQTHEEEQSHQTSDRQTHVDEQNQ----QRQHRQTH 1019

Query: 509  EE-----YGRHRARYSDSHDSKR 456
            EE     +GRH   + D H+ +R
Sbjct: 1020 EENHDHQHGRH---HEDEHNHRR 1039



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/61 (27%), Positives = 29/61 (47%)
 Frame = -2

Query: 635  DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKR 456
            + + + R+THE+   H+       + N  R    + R+R+THEE    + +Y    D  R
Sbjct: 1010 NQQRQHRQTHEENHDHQHGRHHEDEHNHRRQDHHQQRERQTHEE----KEKYQGGQDQSR 1065

Query: 455  S 453
            S
Sbjct: 1066 S 1066



 Score = 30.4 bits (67), Expect = 6.7
 Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 20/99 (20%)
 Frame = -2

Query: 683  RKVGEDRYDPNANRLSDDEN----------RDRKTHEDYGRHK-TRDSDRYDPNANR--L 543
            R+  E+ +D    R  +DE+          R+R+THE+  +++  +D  R  PN  +  +
Sbjct: 1016 RQTHEENHDHQHGRHHEDEHNHRRQDHHQQRERQTHEEKEKYQGGQDQSRSFPNREKSHM 1075

Query: 542  SDDEN----RDRKTHEEYG---RHRARYSDSHDSKRSRY 447
            S+D+     + R+ H  +G     R   S +H +K + Y
Sbjct: 1076 SEDDQCEGPQGRRFHPTHGGGKSQRREKSGNHPTKPANY 1114
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>RBM25_HUMAN (P49756) Probable RNA-binding protein 25 (RNA-binding motif protein|
           25) (RNA-binding region-containing protein 7) (Protein
           S164)
          Length = 784

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 17/68 (25%), Positives = 28/68 (41%)
 Frame = -2

Query: 638 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 459
           S D N+DR    +  R + R+ +R          +  R+R+   E  R R R  D    +
Sbjct: 315 SSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRDR 374

Query: 458 RSRYDDSY 435
               +D+Y
Sbjct: 375 EEDEEDAY 382



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/50 (38%), Positives = 22/50 (44%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           D +RDR    D  R + RD DR        S D N+DR    E  R R R
Sbjct: 289 DRDRDRTKERDRDRDRERDRDR----DRERSSDRNKDRSRSREKSRDRER 334



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRY-----DPNANRLSDDENRD 522
           R+++ ++R +    R  + E R+R+   +  R + ++ +R      D + +R + + +RD
Sbjct: 243 RQEIEKERRERERERERERERREREREREREREREKEKERERERERDRDRDR-TKERDRD 301

Query: 521 RKTHEEYGRHRARYSD-SHDSKRSR 450
           R    +  R R R SD + D  RSR
Sbjct: 302 RDRERDRDRDRERSSDRNKDRSRSR 326



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 7/71 (9%)
 Frame = -2

Query: 632 DENRDRKTHED------YGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD- 474
           D +RDR+   D        R K+RD +R          +  R+R+   E  R R R  + 
Sbjct: 307 DRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERER 366

Query: 473 SHDSKRSRYDD 441
             D KR R +D
Sbjct: 367 EKDKKRDREED 377



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 15/50 (30%), Positives = 24/50 (48%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           D +RDR+   D  R ++ D ++    +   S D  R+R+   E  R R R
Sbjct: 299 DRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERER 348



 Score = 30.0 bits (66), Expect = 8.7
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           + +RDR    D  R + R SDR    +   S +++RDR+   E  R R R
Sbjct: 297 ERDRDRDRERDRDRDRERSSDRNKDRSR--SREKSRDRERERERERERER 344
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>U2AF2_CAEBR (P90727) Splicing factor U2AF 65 kDa subunit (U2 auxiliary factor|
           65 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF65)
          Length = 488

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNA--NRLSDDENRDRKTHEEYGRHRARYSDSHDSK 459
           +E RDR   +   R ++R  DR D +   +R  D  +RDR    E  R R+R  +  D +
Sbjct: 45  EEKRDRDDEDRKKRKRSRSRDRGDRDRKRSRSRDRRDRDRSRSRERRRDRSRDRNRDDRR 104

Query: 458 RSRYDD 441
             R DD
Sbjct: 105 GGRDDD 110
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>HRB1_YEAST (P38922) Protein HRB1 (Protein TOM34)|
          Length = 429

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 27/85 (31%), Positives = 38/85 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           + RRK   D Y  + +R    E R  +   DY R + R ++R +P +    DD  R R  
Sbjct: 21  NGRRKFA-DTYRGSRDR---GEYRGGRERSDY-RERERFNNRDNPRSRDRYDDRRRGRDV 75

Query: 512 HEEYGRHRARYSDSHDSKRSRYDDS 438
              YG  R  Y  S  S+ +  DDS
Sbjct: 76  TGRYGNRRDDYPRSFRSRHNTRDDS 100
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>CWC25_YARLI (Q6C1V6) Pre-mRNA-splicing factor CWC25|
          Length = 561

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 19/97 (19%)
 Frame = -2

Query: 683 RKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDD--------EN 528
           R+  ED  D    R  + E   R+   D  R + R+ +R DP+ +   DD        E 
Sbjct: 184 RRKREDSRDRRNRRDMEREGERRRRRRDGERTRRRERNR-DPSPSVSDDDRGYRQSSREE 242

Query: 527 RDRKTHEEYG-----------RHRARYSDSHDSKRSR 450
           RDRK+  E G           R R RY D    +RSR
Sbjct: 243 RDRKSSREEGGRSRSRDRYRNRSRERYRDRSREERSR 279



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDD--------ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDE 531
           R +  E   DP+ +   DD        E RDRK+  + G  ++R  DRY   +     D 
Sbjct: 214 RTRRRERNRDPSPSVSDDDRGYRQSSREERDRKSSREEG-GRSRSRDRYRNRSRERYRDR 272

Query: 530 NRDRKTHEEYGRHRARYSDSHDSKRSRYDD 441
           +R+ ++ +   R R R     D  R R  D
Sbjct: 273 SREERSRDR-SRERLRSRRDRDRDRDRDRD 301
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>SPP2_EMENI (Q5B4R9) Pre-mRNA-splicing factor spp2|
          Length = 523

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 24/78 (30%), Positives = 33/78 (42%)
 Frame = -2

Query: 680 KVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEY 501
           K   DR    + R   D +RDR    D  R +  D+ RY+   N  S   +R R T + +
Sbjct: 384 KEERDRNSERSER-DKDHHRDRDRDRDSRRLEYDDTYRYESRRNG-SSRRDRSRSTSDRH 441

Query: 500 GRHRARYSDSHDSKRSRY 447
            R R    D  D +  RY
Sbjct: 442 SRRRKYEGDDGDRRDDRY 459



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -2

Query: 587 KTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDSY 435
           K  DS+ +    +R S+   RD+  H +  R R       DS+R  YDD+Y
Sbjct: 376 KRDDSEDWKEERDRNSERSERDKDHHRDRDRDR-------DSRRLEYDDTY 419
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>AN32A_HUMAN (P39687) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
           (HLA-DR-associated prote
          Length = 249

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 3/73 (4%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRK---THEDYGRHKTRDSDRYDPNANRLSDDENRD 522
           D      E+ YD +A  + D+E+ D +     ED    +  D + Y  N   + D+E+ +
Sbjct: 169 DEEEDEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDEEGY--NDGEVDDEEDEE 226

Query: 521 RKTHEEYGRHRAR 483
               EE G+ R R
Sbjct: 227 ELGEEERGQKRKR 239
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>CWC25_ASPFU (Q4X1D7) Pre-mRNA-splicing factor cwc25|
          Length = 447

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
 Frame = -2

Query: 632 DENRDRKTHEDYG-RHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD-SK 459
           D +RDR+   D G R ++RD DR    +    +D +R  + H  + RHR+R   S D S 
Sbjct: 169 DRDRDRERRRDRGDRDRSRDRDRSHRRSRHEDEDAHRSHR-HRSH-RHRSRSPLSPDRSD 226

Query: 458 RSRYDD 441
           R R DD
Sbjct: 227 RKRGDD 232



 Score = 32.3 bits (72), Expect = 1.8
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN----RD 522
           S RK G+DR D    R   D+ RD   H  + R   R S+R D  A+R  +D +    +D
Sbjct: 225 SDRKRGDDR-DYRDERDRRDDRRDE--HRGHDRRDDRRSER-DRRADRGDEDRHSSRYKD 280

Query: 521 RKTHEEYGRHRARYSDSHDSKR 456
           R    ++   R  Y+D   S R
Sbjct: 281 RDDRYDHSTRRRSYADRSPSPR 302
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>DIDO1_MOUSE (Q8C9B9) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (Fragments)
          Length = 1956

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 25/78 (32%), Positives = 33/78 (42%)
 Frame = -2

Query: 683  RKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEE 504
            R    DR   N      D +R+R  + D  R + RD DR        S D +RDR+   +
Sbjct: 1865 RSSNRDRERDNDRAKEWDRSRERSRNRDRDRERRRDRDR------SRSRDRDRDRERARD 1918

Query: 503  YGRHRARYSDSHDSKRSR 450
              R R R  D  D  +SR
Sbjct: 1919 RDRDRGR--DRKDRSKSR 1934



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 25/77 (32%), Positives = 34/77 (44%)
 Frame = -2

Query: 671  EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 492
            EDR        +    RD +   D+ RH+  D  R D ++NR   D  RD    +E+ R 
Sbjct: 1829 EDRRRERERGRNWSRERDWERSRDWDRHREWDKGR-DRSSNR---DRERDNDRAKEWDRS 1884

Query: 491  RARYSDSHDSKRSRYDD 441
            R R S + D  R R  D
Sbjct: 1885 RER-SRNRDRDRERRRD 1900



 Score = 30.4 bits (67), Expect = 6.7
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -2

Query: 632  DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDS 462
            D+ RDR ++ D    + RD+DR   +D +  R S + +RDR+   +  R R+R  D  D 
Sbjct: 1860 DKGRDRSSNRD----RERDNDRAKEWDRSRER-SRNRDRDRERRRDRDRSRSRDRD-RDR 1913

Query: 461  KRSRYDD 441
            +R+R  D
Sbjct: 1914 ERARDRD 1920
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>DDX46_RAT (Q62780) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (Helicase of 117.4 kDa)
          Length = 1032

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 24/81 (29%), Positives = 36/81 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D R K G+DR   + +R   D  R+R    D  R ++RD  R   + +R   + +R R+ 
Sbjct: 29  DKRSKRGDDRRSRSRDR---DRRRERSRSRDKRRSRSRDRKRLRRSRSR---ERDRSRER 82

Query: 512 HEEYGRHRARYSDSHDSKRSR 450
                R R R       +RSR
Sbjct: 83  RRSRSRDRRRSRSRSRGRRSR 103
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>DDX46_PONPY (Q5R6D8) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 24/81 (29%), Positives = 36/81 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D R K G+DR   + +R   D  R+R    D  R ++RD  R   + +R   + +R R+ 
Sbjct: 29  DKRSKRGDDRRSRSRDR---DRRRERSRSRDKRRSRSRDRKRLRRSRSR---ERDRSRER 82

Query: 512 HEEYGRHRARYSDSHDSKRSR 450
                R R R       +RSR
Sbjct: 83  RRSRSRDRRRSRSRSRGRRSR 103
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>DDX46_MOUSE (Q569Z5) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46)
          Length = 1032

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 24/81 (29%), Positives = 36/81 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D R K G+DR   + +R   D  R+R    D  R ++RD  R   + +R   + +R R+ 
Sbjct: 29  DKRSKRGDDRRSRSRDR---DRRRERSRSRDKRRSRSRDRKRLRRSRSR---ERDRSRER 82

Query: 512 HEEYGRHRARYSDSHDSKRSR 450
                R R R       +RSR
Sbjct: 83  RRSRSRDRRRSRSRSRGRRSR 103
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>DDX46_HUMAN (Q7L014) Probable ATP-dependent RNA helicase DDX46 (EC 3.6.1.-)|
           (DEAD box protein 46) (PRP5 homolog)
          Length = 1032

 Score = 34.7 bits (78), Expect = 0.36
 Identities = 24/81 (29%), Positives = 36/81 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D R K G+DR   + +R   D  R+R    D  R ++RD  R   + +R   + +R R+ 
Sbjct: 29  DKRSKRGDDRRSRSRDR---DRRRERSRSRDKRRSRSRDRKRLRRSRSR---ERDRSRER 82

Query: 512 HEEYGRHRARYSDSHDSKRSR 450
                R R R       +RSR
Sbjct: 83  RRSRSRDRRRSRSRSRGRRSR 103
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>CWC25_NEUCR (Q7SI59) Pre-mRNA-splicing factor cwc-25|
          Length = 444

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
 Frame = -2

Query: 635 DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH-RARYSDSHDSK 459
           DD     K  ++  RHK R             DD +RD     +  RH R R SDS D  
Sbjct: 174 DDSQIAAKGGKEQRRHKHRSHHHRSDRHRDRDDDRDRDSARDRDRDRHSRRRRSDSRDRS 233

Query: 458 RSR 450
           RSR
Sbjct: 234 RSR 236



 Score = 33.5 bits (75), Expect = 0.79
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
 Frame = -2

Query: 665 RYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRD----RKTHEEYG 498
           R+   ++    D +RDR    D    + RD DR+       S D +R     R++  E  
Sbjct: 188 RHKHRSHHHRSDRHRDRDDDRDRDSARDRDRDRHSRRRRSDSRDRSRSRSPRRRSDSEED 247

Query: 497 RHRARYSDSHDSKRSRYDD 441
           R + R  DS D  R R  D
Sbjct: 248 RSKQRRRDSPDRTRRRDRD 266
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>PRP5_EMENI (Q5BDW4) Pre-mRNA-processing ATP-dependent RNA helicase prp5 (EC|
           3.6.1.-)
          Length = 1173

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 28/91 (30%), Positives = 36/91 (39%), Gaps = 8/91 (8%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           R +  E RY     R  D ++  R+ H    R   RD D Y           +RDR    
Sbjct: 42  RSRSPERRY---RERDRDRDSYRRRDHSVDRRDSHRDEDNYRRRDRSRDRRRSRDRDHDR 98

Query: 506 EYGR--------HRARYSDSHDSKRSRYDDS 438
           +Y R        +R+R  DS D  R R DDS
Sbjct: 99  DYRRRSRSRDRDYRSRRDDSRDRVRRRTDDS 129
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>CWC25_USTMA (Q4P6I3) Pre-mRNA-splicing factor CWC25|
          Length = 520

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRY-----DPNANRLSDDEN 528
           D  RK   +    +     D+E R  K H D    + RD  RY     D + +R +   N
Sbjct: 308 DRDRKSSWNEGSSSRRHDGDEERRSLKRHRD---DQDRDRHRYERRLHDADDSRPASRSN 364

Query: 527 RDRKTHEEYGRHRARYSDSHDSKRSR 450
           RDR+  +      +R S S+   RSR
Sbjct: 365 RDRRDKDAVDESSSRQSTSYSRSRSR 390



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 1/78 (1%)
 Frame = -2

Query: 674 GEDRYDPNANRLSDDENRDRKTHEDYGRHKTR-DSDRYDPNANRLSDDENRDRKTHEEYG 498
           GE R +  ++   DD  RDRK+  + G    R D D    +  R  DD++RDR     Y 
Sbjct: 294 GESRSESRSHSRRDD--RDRKSSWNEGSSSRRHDGDEERRSLKRHRDDQDRDR---HRYE 348

Query: 497 RHRARYSDSHDSKRSRYD 444
           R      DS  + RS  D
Sbjct: 349 RRLHDADDSRPASRSNRD 366
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>RED_HUMAN (Q13123) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 17/57 (29%), Positives = 25/57 (43%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 492
           Y P+  +   D+ R+R    +  R + RD DR          +  RDR+  EE  RH
Sbjct: 325 YVPSTTKTPRDKERERYRERERDRERDRDRDRERERERDRERERERDREREEEKKRH 381
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>YLPM1_HUMAN (P49750) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
            (ZAP113)
          Length = 1951

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 2/49 (4%)
 Frame = -2

Query: 635  DDENRDRKTHEDYGRHKTRDSDRYDPNANRLSD--DENRDRKTHEEYGR 495
            DD  RD+   EDY R   RD DR     +R  D  D + D +   +YGR
Sbjct: 1071 DDWERDQDMDEDYNREMERDMDRDVDRISRPMDMYDRSLDNEWDRDYGR 1119



 Score = 32.7 bits (73), Expect = 1.3
 Identities = 27/86 (31%), Positives = 37/86 (43%), Gaps = 7/86 (8%)
 Frame = -2

Query: 686  RRKVGEDRYDPNANRLSD--DENRDRKTHEDYGRHK---TRDSDRYDPNANRLSD--DEN 528
            R +  E  +D  +N ++D  D  RDR+TH D  R +     D DR+D       D     
Sbjct: 1493 RERDREPYFDRQSNVIADHRDFKRDRETHRDRDRDRGVIDYDRDRFDRERRPRDDRAQSY 1552

Query: 527  RDRKTHEEYGRHRARYSDSHDSKRSR 450
            RD+K H    R       S+D K  R
Sbjct: 1553 RDKKDHSS-SRRGGFDRPSYDRKSDR 1577
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>RSP6_CAEEL (Q18409) Probable splicing factor, arginine/serine-rich 6|
           (RNA-binding protein srp-1) (CeSRp20)
          Length = 179

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 24/65 (36%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD----SHD 465
           D  R R    D GR ++RD  R D + +R S D +R+R    E  R R+R       SH 
Sbjct: 104 DRGRSRSRSRDRGRDRSRDRSR-DRSRDR-SRDRSRERSRERERTRSRSRSPQERDRSHS 161

Query: 464 SKRSR 450
             RSR
Sbjct: 162 KSRSR 166
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>RU17_ARATH (Q42404) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 427

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
 Frame = -2

Query: 638 SDDENRDRKTHEDY---GRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSH 468
           S D  R+ K H D    GR + RDS R   + +R  D  +RDR+  +   R R R S  H
Sbjct: 290 SRDRPREDKHHRDRDQGGRDRDRDSRR---DRDRTRDRGDRDRRDRD---RGRDRTSRDH 343

Query: 467 DSKRSR 450
           D  RSR
Sbjct: 344 DRDRSR 349
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>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)|
          Length = 1386

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 31/89 (34%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
 Frame = -2

Query: 668  DRYDPNANR---------LSD--DENRDRKTHEDYGRHKTRD--SDRYDPNANRLSDDEN 528
            DRYD + +R         ++D  D  RDR+TH D  R +  D   DR+D    R  DD N
Sbjct: 926  DRYDRDRDREPYFDRPSNITDHRDFKRDRETHRDRDRDRVLDYERDRFD-RERRPRDDRN 984

Query: 527  ---RDRKTHEEYGRHRARYSDSHDSKRSR 450
               RD+K H    R       S+D K  R
Sbjct: 985  QSYRDKKDHSS-SRRGGFDRPSYDRKSDR 1012
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>SPP2_NEUCR (Q7SBU7) Pre-mRNA-splicing factor spp-2|
          Length = 358

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
 Frame = -2

Query: 629 ENRDRKTHEDYGRHKTRDSDR-----YDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD 465
           ENRDR    D  R ++RD DR      D N +R  D+ ++DR  H       +R  D+  
Sbjct: 81  ENRDRS---DRRRDRSRDRDRDRNRDGDRNRDRRRDNRSQDRDRHNNRSSRPSRDDDASR 137

Query: 464 SKR 456
           S+R
Sbjct: 138 SRR 140
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>U2AF2_SCHPO (P36629) Splicing factor U2AF 59 kDa subunit (U2 auxiliary factor|
           59 kDa subunit) (U2 snRNP auxiliary factor large
           subunit) (U2AF59)
          Length = 517

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 11/81 (13%)
 Frame = -2

Query: 650 ANRLSDDENRDRKTHEDYGRHKTRDS------DRYDPNANRLSDDENRDRKTHEEYGRH- 492
           ++RLS   +R  K H DY   + R         R DP  +  S+   R R+   ++ RH 
Sbjct: 4   SSRLSSGSSRIPKRHRDYRDEEPRRERGSGGIGREDPRGHYGSERPRRRRRDESDFRRHR 63

Query: 491 ----RARYSDSHDSKRSRYDD 441
               R+   D    +  RYDD
Sbjct: 64  ESRERSYREDERPRRERRYDD 84
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>PRP5_GIBZE (Q4IP34) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 1227

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 3/88 (3%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTH 510
           SRR   +DR D +      D  R  ++     R + R+SDR    +N L   + R+R   
Sbjct: 19  SRRFRNDDRRDRDRRNDGRDHRRRTRSRSPDVRRQHRNSDRL--YSNELLHQQPRNRDRD 76

Query: 509 EEYGRHRARYSDSH---DSKRSRYDDSY 435
            +  R RAR  D++   D    R DD++
Sbjct: 77  RDRDRDRARDRDNYRRRDRSLDRRDDNH 104



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARY-SDSHDSKR 456
           D +RDR    D  R + R  DR D N  R    +NR+R       R   R  S   D +R
Sbjct: 78  DRDRDRARDRDNYRRRDRSLDRRDDNHYRGGRRDNRERDRRRSRDRFDDRIRSPMTDRRR 137

Query: 455 SR 450
           +R
Sbjct: 138 NR 139
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>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 570

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
 Frame = -2

Query: 692 DSRRKVGEDR-YDPNAN-----RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDE 531
           + +R  G +R + PNA       +  DE R R ++ DYG    R  +R+   A+R  ++ 
Sbjct: 450 ERQRDRGHERDHSPNAGPYNSMAMCSDEERYR-SYRDYG---DRGYERHRERASREKEER 505

Query: 530 NRDRKTHE-EYGRHRARYSDSHDSKRSRYDDSY 435
           +  R+  E E GRH++  S S     S   DS+
Sbjct: 506 HGGRRHREKEEGRHKSSRSSSRRRHESEEGDSH 538
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>DIDO1_HUMAN (Q9BTC0) Death-inducer obliterator 1 (DIO-1) (Death-associated|
            transcription factor 1) (DATF-1) (hDido1)
          Length = 2240

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
 Frame = -2

Query: 692  DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDR-YDPNANRLSD-DENRDR 519
            D++ +  EDR        +    RD     ++ RH+ +DS R +D N  R ++ D  R+ 
Sbjct: 2104 DAQGRASEDRRRERERGRNWSRERDWDRPREWDRHRDKDSSRDWDRNRERSANRDREREA 2163

Query: 518  KTHEEYGRHRARYSDSHDSKRSRYDD 441
               +E+ R R R S + + +R R  D
Sbjct: 2164 DRGKEWDRSRER-SRNRERERDRRRD 2188



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
 Frame = -2

Query: 686  RRKVGEDRYDPNANRLSDDENRDRKTHEDYG----------RHKTRDSDRYDPNANRLSD 537
            R K     +D N  R +   NRDR+   D G          R++ R+ DR        S 
Sbjct: 2139 RDKDSSRDWDRNRERSA---NRDREREADRGKEWDRSRERSRNRERERDRRRDRDRSRSR 2195

Query: 536  DENRDRKTHEEYGRHRARYSDSHDSKR 456
            + +RD+    E GR R   S S +S R
Sbjct: 2196 ERDRDKARDRERGRDRKDRSKSKESAR 2222
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>SWAP_CAEEL (Q10580) Protein SWAP (Suppressor of white apricot protein homolog)|
          Length = 749

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
 Frame = -2

Query: 677 VGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYG 498
           + E  ++P       DE+R+RK H    R + R S    P       D +R+ K   + G
Sbjct: 670 LSESGFEPVEEMKRTDEDRERKRHRKRSRSRRR-SRSCSPR------DRSREHKKSRKSG 722

Query: 497 RH-----RARYSDSHDSKRSRYDD 441
           RH     R+   D H   RSR  D
Sbjct: 723 RHHRSRSRSSSRDRHRRNRSRSRD 746
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>STC_DROME (P40798) Protein shuttle craft|
          Length = 1106

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 26/74 (35%), Positives = 35/74 (47%), Gaps = 3/74 (4%)
 Frame = -2

Query: 650 ANRLSDDEN--RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR-ARY 480
           AN    + N  R+R+   D  R + RD DR D + +R   D +RDR      G  R  R 
Sbjct: 224 ANNQCSNHNYERERERERDRDRDRERDRDR-DRDRDR---DRDRDRDRDSRPGNTRQQRR 279

Query: 479 SDSHDSKRSRYDDS 438
           SD  D +  RY+ S
Sbjct: 280 SDYRDDREDRYERS 293



 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSD--DENRDRKTHEEYGRHRARYSDSHDSK 459
           D +RDR    D  R + RDS   +    R SD  D+  DR  +E   R R +    +D+ 
Sbjct: 250 DRDRDRDRDRDRDRDRDRDSRPGNTRQQRRSDYRDDREDR--YERSDRRRPQKQQRYDNH 307

Query: 458 RS--RYDD 441
           RS  R DD
Sbjct: 308 RSNKRRDD 315
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>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (SBP)|
          Length = 279

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 23/91 (25%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
 Frame = -2

Query: 683 RKVGEDRYDPNANRLSDDENRDRKTHEDYG----------RHKTRDSDRYDPNANRLSDD 534
           + + +D  D + ++  DD+  D    ED+G           H   D D+ D N   +  D
Sbjct: 150 KNIHDDFDDNDDDKEDDDDEHDDDNEEDHGDKDNDNDHDDDHDDDDDDKEDDNEEDV--D 207

Query: 533 ENRDRKTHEEYGRHRARYSDSHDSKRSRYDD 441
           + RD K  +E      + +D  D + S  DD
Sbjct: 208 DERDDKDDDEEDDDNDKENDKDDGEGSGDDD 238
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>YEMA_DROME (P25992) Yemanuclein-alpha|
          Length = 1002

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/80 (23%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYD-PNANRLSDDENRDRKTH 510
           +R V       +++   DDEN D    ED       DS+  D  ++   S+ E+ + +  
Sbjct: 203 KRMVSSSSESSSSSSGDDDENDDGNNEEDDESDSEDDSEENDESDSEDDSESESLEDEDS 262

Query: 509 EEYGRHRARYSDSHDSKRSR 450
               +  ++Y D+H +KR++
Sbjct: 263 AATAKSSSKYKDNHQAKRAK 282
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>CROP_MOUSE (Q5SUF2) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 27/83 (32%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR+  E+R      R  D E R R       RH +R SDR    +       +RDR+   
Sbjct: 272 RRREEEER---EKERARDRERRKRSRSRS--RHSSRTSDRRCSRSRDHKRSRSRDRRRSR 326

Query: 506 EYGRHRARYSDSHDSK-RSRYDD 441
              R R+R  D  + K RSR  D
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRD 349
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>SRP2_SCHPO (P78814) Pre-mRNA-splicing factor srp2|
          Length = 365

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 25/79 (31%), Positives = 32/79 (40%)
 Frame = -2

Query: 671 EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 492
           E RY P      ++ +  R+   D  R  +R   R      R  DDE R R   +EY   
Sbjct: 217 ERRYAPRGEYRRNNRDEYRRGGRDEYRRNSRSDYR------RPHDDEYR-RPRGDEYRPG 269

Query: 491 RARYSDSHDSKRSRYDDSY 435
           R  Y  S D  R  +DD Y
Sbjct: 270 RDEYRRSRDDGRPSHDDEY 288
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>NELFE_MOUSE (P19426) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 375

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 1/78 (1%)
 Frame = -2

Query: 683 RKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEE 504
           R    DR    +     D+ RDR    D  R + +D DR          D +RDR    E
Sbjct: 184 RSRSRDRSHDRSRDRDRDKERDRDRDRDRDRDRDKDKDRDRDRDRDKERDRDRDRDRDRE 243

Query: 503 YGRHRA-RYSDSHDSKRS 453
             R    R SDS   +R+
Sbjct: 244 RDREGPFRRSDSFPERRA 261



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = -2

Query: 638 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 459
           S D +RDR   ++  R + RD DR D + ++   D +RDR   +E  R R R  D    +
Sbjct: 191 SHDRSRDRDRDKERDRDRDRDRDR-DRDKDK---DRDRDRDRDKERDRDRDRDRDRERDR 246

Query: 458 RS--RYDDSY 435
               R  DS+
Sbjct: 247 EGPFRRSDSF 256
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>DHX8_ARATH (Q38953) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase (EC 3.6.1.-)
          Length = 1168

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 10/75 (13%)
 Frame = -2

Query: 644 RLSDDENRDRKTHE-----DYGRHKTRDS--DRYDPNANRLSDDENRDRKT---HEEYGR 495
           R  +D NRDR   E     D  R++ RD   DR+        D+E  DR++   H E GR
Sbjct: 122 RREEDRNRDRDRRESGRDRDRDRNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGR 181

Query: 494 HRARYSDSHDSKRSR 450
                 +  D +R R
Sbjct: 182 GDG--GEGEDRRRDR 194
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>CPSF6_PONPY (Q5NVH8) Cleavage and polyadenylation specificity factor 6|
          Length = 552

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDR-KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 486
           Y   + R      RD  ++ E   RHK+R  DR+D        + +R+R+ H +  R R 
Sbjct: 485 YGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRD 540

Query: 485 RYSDSHDSKRSR 450
           R  D     R R
Sbjct: 541 RERDREREYRHR 552
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>ELOA1_DROME (Q9VCP0) Transcription elongation factor B polypeptide 3 (RNA|
           polymerase II transcription factor SIII subunit A)
           (Elongin A) (dEloA)
          Length = 643

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 17/82 (20%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDEN----RDRKTHEDYGRHKTRDSDRYDPNANRLSDDENR 525
           DS +K    R+D + +R  D E     ++ K  +  G HK++DS +   +      + ++
Sbjct: 154 DSDKKHKSSRHDKSKDRDKDREGQKEAKEHKEKKSNGEHKSKDSSKSSSSHKSSKSESHK 213

Query: 524 DRKTHEEYGRHRARYSDSHDSK 459
              T  ++ + +  +S+  + K
Sbjct: 214 SEHTKSKHEKDKTSHSELKEVK 235
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>PPIL4_USTMA (P0C196) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 551

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
 Frame = -2

Query: 668 DRYDPNA---NRLSDDENRDRKTH-----EDYGRHKTRDSDRYDPNANRLSDDENRD--- 522
           D Y PNA    +  DD   DR+       +    H  +DS+R    + R S+D+ RD   
Sbjct: 373 DSYRPNAGGYQKRGDDRRHDRRDQPTARGDTSSWHSRQDSER----SYRESNDDTRDRSN 428

Query: 521 ---RKTHEEYGRHRARYSDSHDSKR 456
              R+ H++  +     S+ HDS R
Sbjct: 429 KRSRRHHDDVPQQSRSRSERHDSHR 453
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>CPSF6_MOUSE (Q6NVF9) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           Y   + R    E    ++ E   RHK+R  DR+D        + +R+R+ H +  R R R
Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540

Query: 482 YSDSHDSKRSR 450
             D     R R
Sbjct: 541 ERDREREYRHR 551
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>CPSF6_HUMAN (Q16630) Cleavage and polyadenylation specificity factor 6|
           (Cleavage and polyadenylation specificity factor 68 kDa
           subunit) (CPSF 68 kDa subunit) (Pre-mRNA cleavage factor
           Im 68-kDa subunit) (Protein HPBRII-4/7)
          Length = 551

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           Y   + R    E    ++ E   RHK+R  DR+D        + +R+R+ H +  R R R
Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540

Query: 482 YSDSHDSKRSR 450
             D     R R
Sbjct: 541 ERDREREYRHR 551
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>CPSF6_CHICK (Q5ZL34) Cleavage and polyadenylation specificity factor 6|
          Length = 551

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/71 (28%), Positives = 30/71 (42%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRAR 483
           Y   + R    E    ++ E   RHK+R  DR+D        + +R+R+ H +  R R R
Sbjct: 485 YGSGSRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRDRDRDR 540

Query: 482 YSDSHDSKRSR 450
             D     R R
Sbjct: 541 ERDREREYRHR 551
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>CLK4_MOUSE (O35493) Dual specificity protein kinase CLK4 (EC 2.7.12.1)|
           (CDC-like kinase 4)
          Length = 481

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 23/69 (33%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRL-----SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN 528
           DSR   G + Y  +  R      S  ENR  K H     H+ +DSD +   A  L++ + 
Sbjct: 13  DSRESWGHESYSGSHKRKRRSHSSTQENRHCKPH-----HQFKDSDCHYLEARCLNERDY 67

Query: 527 RDRKTHEEY 501
           RDR+  +EY
Sbjct: 68  RDRRYIDEY 76
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>MOG5_CAEEL (Q09530) Probable pre-mRNA-splicing factor ATP-dependent RNA|
           helicase mog-5 (EC 3.6.1.-) (Sex determination protein
           mog-5) (Masculinization of germ line protein 5)
          Length = 1200

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDRYDPNANRLSDD----ENRDRKTHEEYGRHRARYSDSHD 465
           + +R R    D  R ++R  DR     +R  +D    + RDR    + GR   R  D   
Sbjct: 155 NRSRSRSRSRDRKRRRSRSGDRDRRRRSRSREDRRDRDRRDRDRDRDRGRGDRRGDDRQR 214

Query: 464 SKRSRYDD 441
            +R R DD
Sbjct: 215 DRRDRRDD 222
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>AN32A_RAT (P49911) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Leucine-rich acidic nuclear protein)
          Length = 247

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRK---THEDYGRHKTRDSDRYDPNANRLSDDENRD 522
           D      E+ YD  A  + D+E  D +     ED    +  D + Y  N   + D+E+ +
Sbjct: 167 DDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEEGY--NDGEVDDEEDEE 224

Query: 521 RKTHEEYGRHRARYSD 474
               EE  + R R  D
Sbjct: 225 DAAEEEGSQKRKREPD 240
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>AN32A_MOUSE (O35381) Acidic leucine-rich nuclear phosphoprotein 32 family|
           member A (Potent heat-stable protein phosphatase 2A
           inhibitor I1PP2A) (Acidic nuclear phosphoprotein pp32)
           (Cerebellar leucine-rich acidic nuclear protein)
          Length = 247

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRK---THEDYGRHKTRDSDRYDPNANRLSDDENRD 522
           D      E+ YD  A  + D+E  D +     ED    +  D + Y  N   + D+E+ +
Sbjct: 167 DDEEDEDEEEYDEYAQLVEDEEEEDEEEEGEEEDVSGEEEEDEEGY--NDGEVDDEEDEE 224

Query: 521 RKTHEEYGRHRARYSD 474
               EE  + R R  D
Sbjct: 225 EAGEEEGSQKRKREPD 240
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>CPSF6_XENLA (Q6DDW4) Cleavage and polyadenylation specificity factor 6|
          Length = 548

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDR-KTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRA 486
           Y   + R      RD  ++ E   RHK+R  DR+D        + +R+R+ H +  R R 
Sbjct: 481 YGSGSRRRERSRERDHSRSREKSRRHKSRSRDRHDDYYR----ERSRERERHRDRERDRD 536

Query: 485 RYSDSHDSKRSR 450
           R  D     R R
Sbjct: 537 RERDREREYRHR 548
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>NELFE_HUMAN (P18615) Negative elongation factor E (NELF-E) (RD protein)|
          Length = 380

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 22/68 (32%), Positives = 27/68 (39%)
 Frame = -2

Query: 638 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 459
           S + NRDR    +  R + RD DR          D +RDR    E  R R R  D     
Sbjct: 191 SHERNRDRDRDRERDRDRDRDRDR------ERDRDRDRDRDRDRERDRDRERDRDRDREG 244

Query: 458 RSRYDDSY 435
             R  DS+
Sbjct: 245 PFRRSDSF 252
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>PDPK1_DROME (Q9W0V1) 3-phosphoinositide-dependent protein kinase 1 (EC|
           2.7.11.1) (dPDK-1) (Serine/threonine-protein kinase 61C)
           (dSTPK61)
          Length = 836

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = -2

Query: 650 ANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDS 471
           +N   DDE+ DR  +ED         D YD ++  L D ++  ++   +  RHR R  + 
Sbjct: 413 SNSDEDDEDSDRLENED--------EDFYDRDSEELDDGDDEQQQEEMDSPRHRQRRYNR 464

Query: 470 H 468
           H
Sbjct: 465 H 465
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>CWC25_GIBZE (Q4IRI9) Pre-mRNA-splicing factor CWC25|
          Length = 393

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 25/82 (30%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
 Frame = -2

Query: 674 GEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRL---SDDE-NRDRKTHE 507
           GEDR+       S  ++  R+      RH+ R  D  D ++ R    SD+E  RDR    
Sbjct: 195 GEDRHHRRRRSYSRSQSPRRRDGSREDRHRRRRDDSRDRHSRRRRDGSDEEGRRDRDNRS 254

Query: 506 EYGRHRARYSDSHDSKRSRYDD 441
              RHR      HD  R   D+
Sbjct: 255 GGDRHR------HDGDRRHSDE 270
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>PRP5_YARLI (Q6CCZ1) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 974

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 1/72 (1%)
 Frame = -2

Query: 668 DRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHR 489
           DR     +R  D  +RDR    D  R + R   R DP   R S    R+R+      R R
Sbjct: 27  DRSRDERDRFRDVRDRDRD--RDRDRERDRGGYRQDPRDRRYSRSRERERRGSGSRDRSR 84

Query: 488 ARYSD-SHDSKR 456
            R  D S D+ R
Sbjct: 85  DRSRDRSRDAHR 96
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>IF4B_MOUSE (Q8BGD9) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPN--ANRLSD--DENRD 522
           +   +G  R   +    + D++RD ++   +GR + RDSD+ D +  A   +D  D+   
Sbjct: 157 NEESLGNRRIRVDVADQAQDKDRDDRS---FGRDRNRDSDKTDTDWRARPTTDSFDDYPP 213

Query: 521 RKTHEEYGRHRARYSDSHDSKRSR--YDDSY 435
           R+  + +G    +Y D +DS R R  Y D Y
Sbjct: 214 RRGDDSFG---DKYRDRYDSDRYRDGYRDGY 241
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>IF4B_HUMAN (P23588) Eukaryotic translation initiation factor 4B (eIF-4B)|
          Length = 611

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPN--ANRLSD--DENRD 522
           +   +G  R   +    + D++RD ++   +GR + RDSD+ D +  A   +D  D+   
Sbjct: 157 NEESLGNRRIRVDVADQAQDKDRDDRS---FGRDRNRDSDKTDTDWRARPATDSFDDYPP 213

Query: 521 RKTHEEYGRHRARYSDSHDSKRSR--YDDSY 435
           R+  + +G    +Y D +DS R R  Y D Y
Sbjct: 214 RRGDDSFG---DKYRDRYDSDRYRDGYRDGY 241
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>PPIL4_ASPFU (Q4WAQ9) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 459

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 18/45 (40%), Positives = 23/45 (51%)
 Frame = -2

Query: 569 RYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDDSY 435
           RY  +  R S  ++R  K     G HR RY D  DS+  R +DSY
Sbjct: 391 RYSRSPKRSSRRDSRSPKR----GLHRNRYRDRSDSRSPRREDSY 431



 Score = 31.6 bits (70), Expect = 3.0
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 9/77 (11%)
 Frame = -2

Query: 686 RRKVG-EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRY--------DPNANRLSDD 534
           RR V  E RY  +  R S  ++R  K      R++ R   R         D N  R  +D
Sbjct: 383 RRPVSRERRYSRSPKRSSRRDSRSPKRGLHRNRYRDRSDSRSPRREDSYRDRNRERSYND 442

Query: 533 ENRDRKTHEEYGRHRAR 483
           E RDR+  + Y   R R
Sbjct: 443 ERRDRRDDDRYRERRRR 459
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>YOD2_CAEEL (P34594) Hypothetical protein ZC262.2|
          Length = 233

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 9/68 (13%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRD---------SDRYDPNANRLS 540
           +  R    DR+ P  N     ++RD++   DYGR+  RD         +DR D N +R +
Sbjct: 45  ERERSPKRDRH-PEKNESRRHDDRDQERRRDYGRNDRRDDRRGDGSWKTDRNDRN-DRRN 102

Query: 539 DDENRDRK 516
           D + RD K
Sbjct: 103 DFQRRDDK 110



 Score = 30.4 bits (67), Expect = 6.7
 Identities = 16/70 (22%), Positives = 31/70 (44%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           ++   V + + D    +  +  +R R  H++  R   RD     P  N     ++RD++ 
Sbjct: 15  ETETSVAKRQKDEKKEKKKEKRDRSRSPHKERERSPKRDRH---PEKNESRRHDDRDQER 71

Query: 512 HEEYGRHRAR 483
             +YGR+  R
Sbjct: 72  RRDYGRNDRR 81
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>RED_MOUSE (Q9Z1M8) Protein Red (Protein RER) (IK factor) (Cytokine IK)|
          Length = 557

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 15/57 (26%), Positives = 26/57 (45%)
 Frame = -2

Query: 662 YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRH 492
           Y P+  +   D+ R+R    +  R + RD +R          + +R+R+  EE  RH
Sbjct: 325 YVPSTTKTPRDKERERYRERERDRERDRDRERDRERDRERERERDREREREEEKKRH 381
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>NOP58_YEAST (Q12499) Nucleolar protein NOP58 (Nucleolar protein NOP5)|
          Length = 511

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 13/79 (16%)
 Frame = -2

Query: 647 NRLSDDENRDRKTHEDYGRHKTR----DSDRYDPNANRL---------SDDENRDRKTHE 507
           NRLS  E RD +T     R   +    ++  Y+ +A+           SDDE  ++K  +
Sbjct: 396 NRLSQLEGRDLRTTPKVVREAKKVEMTEARAYNADADTAKAASDSESDSDDEEEEKKEKK 455

Query: 506 EYGRHRARYSDSHDSKRSR 450
           E  R R    DS DSK+++
Sbjct: 456 EKKRKRDDDEDSKDSKKAK 474
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>YHO0_YEAST (P38800) Hypothetical 149.7 kDa protein in IRE1-KSP1 intergenic|
           region
          Length = 1345

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 18/50 (36%), Positives = 28/50 (56%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSD 537
           R +   +  + ++N +SDDEN D    +DY  +   D D YD N+N +SD
Sbjct: 662 RFRSNSNNTNSSSNSISDDENDD--YDDDYDDYGDDDDDLYD-NSNNISD 708
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>YP68_CAEEL (Q09217) Hypothetical protein B0495.8|
          Length = 313

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 21/60 (35%), Positives = 27/60 (45%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR  G DR +   +R  D  NRDR    D        S R D   +R  D +NRDR+  +
Sbjct: 258 RRDRGGDRGEYRGDRDRDRRNRDRSRSRDR-------SYRRDDRGDRRYDRDNRDRRDRD 310
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>PPIL4_CRYNE (Q5KNY5) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 504

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 13/93 (13%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTR-----------DSDRYDPNANRL 543
           S R    DR          +  RDR    D  R + R           D DR D + N  
Sbjct: 412 SSRGSKRDRERSPKRERDRERERDRSPRRDRDRERDRSPRRDRDRERDDHDRRDRDRNGR 471

Query: 542 SDDENRDRKTHEEYGRHR--ARYSDSHDSKRSR 450
             + N DR+ + E  R R   RY +  D  R R
Sbjct: 472 DRERNGDRERYRERSRERENERYRERDDRDRRR 504



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 22/82 (26%), Positives = 35/82 (42%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           +R+   +R    + R   D  RDR    D  R +  D DR D + N       RDR+ + 
Sbjct: 425 KRERDRERERDRSPRRDRDRERDRSPRRDRDRERD-DHDRRDRDRN------GRDRERNG 477

Query: 506 EYGRHRARYSDSHDSKRSRYDD 441
           +  R+R R  +  + +    DD
Sbjct: 478 DRERYRERSRERENERYRERDD 499
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>CCAR1_MOUSE (Q8CH18) Cell division cycle and apoptosis regulator protein 1 (Cell|
            cycle and apoptosis regulatory protein 1) (CARP-1)
          Length = 1146

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
 Frame = -2

Query: 686  RRKVGEDRYDPNANR--LSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
            RRK G+D+ D   +R     +E R   + +D    +  + D YDP     ++DE+ DR+ 
Sbjct: 826  RRKSGDDK-DKKEDRDERKKEEKRKDDSKDDDETEEDNNQDEYDPMEAEEAEDEDDDREE 884

Query: 512  HE 507
             E
Sbjct: 885  EE 886
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>CAC1E_RAT (Q07652) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (RBE-II) (RBE2) (Brain calcium channel II) (BII)
          Length = 2222

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = -2

Query: 689  SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR 519
            SRR+        +A+RL+ D      TH   GR + R  +R     P+ +R + +E   R
Sbjct: 1958 SRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEE---R 2014

Query: 518  KTHEEYGRHRARYSDSHDSKRSR 450
             T  ++     R S S    RS+
Sbjct: 2015 GTQADWESPERRQSRSPSEGRSQ 2037
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>RHO_MICLU (P52154) Transcription termination factor rho (EC 3.6.1.-)|
           (ATP-dependent helicase rho)
          Length = 690

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 27/93 (29%), Positives = 35/93 (37%), Gaps = 10/93 (10%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSD----------DENRDRKTHEDYGRHKTRDSDRYDPNANRLSD 537
           RR+ G+D      +R SD          D   DR+  +D GR   R  +      N    
Sbjct: 161 RRRAGDDDAQQGQDRRSDGAQGEDGADADRRGDREDRDDNGRENGRGRN----GRNGRDR 216

Query: 536 DENRDRKTHEEYGRHRARYSDSHDSKRSRYDDS 438
           D  RDR+   E  R R    D   S+  R D S
Sbjct: 217 DNGRDRENGRENSRDRENGRDG--SREQRGDKS 247
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>CROP_PONPY (Q5R8W6) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR+  E+R      R  D E R R       RH +R SDR    +       +R+R+   
Sbjct: 272 RRREEEER---EKERARDRERRKRSRSRS--RHSSRTSDRRCSRSRDHKRSRSRERRRSR 326

Query: 506 EYGRHRARYSDSHDSK-RSRYDD 441
              R R+R  D  + K RSR  D
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRD 349
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>CROP_HUMAN (O95232) Cisplatin resistance-associated overexpressed protein|
           (cAMP regulatory element associated protein 1)
           (CRE-associated protein 1) (CREAP-1) (Luc7A) (Okadaic
           acid-inducible phosphoprotein OA48-18)
          Length = 432

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR+  E+R      R  D E R R       RH +R SDR    +       +R+R+   
Sbjct: 272 RRREEEER---EKERARDRERRKRSRSRS--RHSSRTSDRRCSRSRDHKRSRSRERRRSR 326

Query: 506 EYGRHRARYSDSHDSK-RSRYDD 441
              R R+R  D  + K RSR  D
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRD 349
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>CROP_BOVIN (Q3SX41) Cisplatin resistance-associated overexpressed protein|
          Length = 432

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR+  E+R      R  D E R R       RH +R SDR    +       +R+R+   
Sbjct: 272 RRREEEER---EKERARDRERRKRSRSRS--RHSSRTSDRRCSRSRDHKRSRSRERRRSR 326

Query: 506 EYGRHRARYSDSHDSK-RSRYDD 441
              R R+R  D  + K RSR  D
Sbjct: 327 SRDRRRSRSHDRSERKHRSRSRD 349
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>HS90A_BRARE (Q90474) Heat shock protein HSP 90-alpha|
          Length = 726

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
 Frame = -2

Query: 674 GEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDS--DRYDPNANRLSDDENRDRKTHEEY 501
           GED+  P    L  DE+ D K  ++  + K ++   D  + N  +     N D  T+EEY
Sbjct: 244 GEDKDKPKIEDLGADEDEDSKDGKNKRKKKVKEKYIDAQELNKTKPIWTRNPDDITNEEY 303

Query: 500 G 498
           G
Sbjct: 304 G 304
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>CAC1E_HUMAN (Q15878) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2312

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = -2

Query: 689  SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR 519
            SRR+        +A+RL+ D      TH   GR + R  +R     P+ +R + +E   R
Sbjct: 2048 SRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEE---R 2104

Query: 518  KTHEEYGRHRARYSDSHDSKRSR 450
             T  ++     R S S    RS+
Sbjct: 2105 GTQADWESPERRQSRSPSEGRSQ 2127
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>CAC1E_MOUSE (Q61290) Voltage-dependent R-type calcium channel alpha-1E subunit|
            (Voltage-gated calcium channel alpha subunit Cav2.3)
            (Calcium channel, L type, alpha-1 polypeptide, isoform 6)
            (Brain calcium channel II) (BII)
          Length = 2272

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 3/83 (3%)
 Frame = -2

Query: 689  SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR 519
            SRR+        +A+RL+ D      TH   GR + R  +R     P+ +R + +E   R
Sbjct: 2009 SRRRSYHSSLRLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEE---R 2065

Query: 518  KTHEEYGRHRARYSDSHDSKRSR 450
             T  ++     R S S    RS+
Sbjct: 2066 GTQADWESPERRQSRSPSEGRSQ 2088
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>CCAR1_HUMAN (Q8IX12) Cell division cycle and apoptosis regulator protein 1 (Cell|
            cycle and apoptosis regulatory protein 1) (CARP-1) (Death
            inducer with SAP domain)
          Length = 1150

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 2/83 (2%)
 Frame = -2

Query: 686  RRKVGEDR--YDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
            RRK G+D+   +    R  +D+ +D    +D    +  + D YDP     ++DE  DR  
Sbjct: 829  RRKSGDDKDKKEDRDERKKEDKRKDDSKDDDE-TEEDNNQDEYDPMEAEEAEDEEDDRDE 887

Query: 512  HEEYGRHRARYSDSHDSKRSRYD 444
             E   R   R  + +  +R   D
Sbjct: 888  EEMTKRDDKRDINRYCKERPSKD 910
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>RU17_HUMAN (P08621) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 437

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 20/70 (28%), Positives = 33/70 (47%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D  R    +R + +  R  + E R  ++ +   R ++RD +    +  R S D++RDRK 
Sbjct: 232 DRDRDRERERRERSRERDKERERRRSRSRDRRRRSRSRDKEERRRSRER-SKDKDRDRKR 290

Query: 512 HEEYGRHRAR 483
                R RAR
Sbjct: 291 RSSRSRERAR 300
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>MSS4_YEAST (P38994) Probable phosphatidylinositol-4-phosphate 5-kinase MSS4|
           (EC 2.7.1.68) (1-phosphatidylinositol-4-phosphate
           kinase) (PIP5K) (PtdIns(4)P-5-kinase)
           (Diphosphoinositide kinase)
          Length = 779

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
 Frame = -2

Query: 671 EDRYDPNANRLSDDENR---DRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEY 501
           +DR  PN+N   D  +R   DR  H  Y      +S+   P   RLSD E+    + EE 
Sbjct: 40  QDRSVPNSNSNPDSNHRIKKDRNNHTSYHSSSNSESNMESP---RLSDGESSTPTSIEEL 96

Query: 500 GRH-------RARYSDS----HDSKRSRYDDSY 435
                     +  YS S    HD+  +  DD +
Sbjct: 97  NPTINNSRLVKRNYSISIDPLHDNSNNNTDDDH 129
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>ACINU_MOUSE (Q9JIX8) Apoptotic chromatin condensation inducer in the nucleus|
            (Acinus)
          Length = 1338

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = -2

Query: 692  DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
            + RRK  E+       + ++ E R+R+   +  R  +R+ +R     +R  + +  DR+ 
Sbjct: 1248 EKRRKEREEEEQKEREKEAERE-RNRQLEREKRREHSRERER-----DRERERDRGDRER 1301

Query: 512  HEEYGRHRARYSDSHDSKR 456
              E  R R R  D  D+KR
Sbjct: 1302 ERERDRDRGRERDRRDTKR 1320
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>PPIL4_GIBZE (Q4IE79) Peptidyl-prolyl cis-trans isomerase-like 4 (EC 5.2.1.8)|
           (PPIase) (Rotamase)
          Length = 605

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = -2

Query: 689 SRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR-KT 513
           SR     DR     ++  DD   DR           RD DR D + NR  D ++RDR + 
Sbjct: 422 SRSPRPRDRSRDRYHKPRDDRRGDR-----------RDRDRRDQDRNRYRDRDHRDRGRE 470

Query: 512 HEEYGR 495
            + YGR
Sbjct: 471 KDRYGR 476



 Score = 30.8 bits (68), Expect = 5.1
 Identities = 21/68 (30%), Positives = 28/68 (41%)
 Frame = -2

Query: 638 SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSK 459
           S  +NR R       R + R  DRY    ++  DD   DR+  +   + R RY D     
Sbjct: 416 SRQQNRSRSP-----RPRDRSRDRY----HKPRDDRRGDRRDRDRRDQDRNRYRDRDHRD 466

Query: 458 RSRYDDSY 435
           R R  D Y
Sbjct: 467 RGREKDRY 474
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>CLK4_HUMAN (Q9HAZ1) Dual specificity protein kinase CLK4 (EC 2.7.12.1)|
           (CDC-like kinase 4)
          Length = 481

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRL-----SDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN 528
           DSR   G + Y  +  R      S  ENR  K H     H+ ++SD +   A  L++ + 
Sbjct: 13  DSRESWGHESYRGSHKRKRRSHSSTQENRHCKPH-----HQFKESDCHYLEARSLNERDY 67

Query: 527 RDRKTHEEY 501
           RDR+  +EY
Sbjct: 68  RDRRYVDEY 76
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>MAAZ3_SCHCO (P37937) Mating-type protein A-alpha Z3|
          Length = 891

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 19/66 (28%), Positives = 25/66 (37%)
 Frame = -2

Query: 629 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSR 450
           E R  K   D  + +      Y P+    SDDE  D    E    + +  SDS D   S 
Sbjct: 342 EQRQAKNERDAAQMREEQRASY-PSPEPSSDDEGEDEDDEESTDAYDSEASDSEDDSDSD 400

Query: 449 YDDSYN 432
            D  Y+
Sbjct: 401 TDSHYS 406
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>SECA_STAES (Q8CPZ2) Preprotein translocase secA subunit|
          Length = 844

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/67 (26%), Positives = 40/67 (59%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M+  K+++  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MIPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTL 437
           G+ ++T+
Sbjct: 129 GVHVITV 135
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>SECA_STAEQ (Q5HQX6) Preprotein translocase secA subunit|
          Length = 844

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/67 (26%), Positives = 40/67 (59%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M+  K+++  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MIPYKVQVMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTL 437
           G+ ++T+
Sbjct: 129 GVHVITV 135
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>WBP11_MOUSE (Q923D5) WW domain-binding protein 11 (WBP-11)|
          Length = 641

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/78 (23%), Positives = 33/78 (42%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           RR+  +  Y P   +   D++    T ED G  +  D D++D +      D +      +
Sbjct: 228 RRRDEDMLYSPELAQRGHDDDMS-STSEDDGYPEDMDQDKHDDSTEDSDTDRSDAESDGD 286

Query: 506 EYGRHRARYSDSHDSKRS 453
           E+G       D+ + K+S
Sbjct: 287 EFGHREDSERDNTEEKKS 304
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>BAZ2B_HUMAN (Q9UIF8) Bromodomain adjacent to zinc finger domain 2B (hWALp4)|
          Length = 1972

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 25/85 (29%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
 Frame = -2

Query: 686  RRKVGEDRYDPNANRLSDD----ENRDRKTHEDYGRHKT---RDSDRYDPNANRLSDDEN 528
            RRK G+  YD + +  SDD    ++ D +  ED    KT    D D  D  A+ + + E 
Sbjct: 1095 RRKGGDSDYDDDDDDDSDDQGDEDDEDEEDKEDKKGKKTDICEDEDEGDQAAS-VEELEK 1153

Query: 527  RDRKTHEEYGRHRARYSDSHDSKRS 453
            +  K  ++  ++R +  D+  S RS
Sbjct: 1154 QIEKLSKQQSQYRRKLFDASHSLRS 1178
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>DEM1_PHYSA (P05422) Dermorphin-1 precursor [Contains: Deltorphin|
           (Dermenkephalin); Dermorphin]
          Length = 197

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 17/65 (26%), Positives = 30/65 (46%)
 Frame = -2

Query: 644 RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHD 465
           R +++EN + + HE+    K       D  A +   +EN   + HEE G    RY+  + 
Sbjct: 27  RETEEENENEENHEEGSEMKRYMFHLMDGEAKKRDSEENEIEENHEE-GSEMKRYAFGYP 85

Query: 464 SKRSR 450
           S  ++
Sbjct: 86  SGEAK 90
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>NOG2_CRYNV (Q8J109) Nucleolar GTP-binding protein 2|
          Length = 720

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 21/84 (25%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
 Frame = -2

Query: 674 GEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEY-- 501
           GE+  + +     D+++ D  + +  G+ K  DSD  +  A +        +K    Y  
Sbjct: 626 GEEVEEDDEEEEGDEDDEDVPSAKQLGKRKAIDSDEEEQTAIKAKRMTTNKQKASNFYTH 685

Query: 500 ----GRHRARYSDSHDSKRSRYDD 441
                R+R R    +  KRSR DD
Sbjct: 686 ANVKNRNRDRKVPKNPGKRSRGDD 709
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>CCD93_MOUSE (Q7TQK5) Coiled-coil domain-containing protein 93|
          Length = 629

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 19/50 (38%), Positives = 24/50 (48%)
 Frame = -2

Query: 590 HKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYDD 441
           +K R   R    A  L D+E+R   T  EYGR   RY  S  SK  + +D
Sbjct: 176 YKPRRKYRRQRGAEELPDEESRVHSTLLEYGR---RYGFSRQSKTEKAED 222
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>YO87_CAEEL (P34623) Hypothetical protein ZK1236.7|
          Length = 324

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
 Frame = -2

Query: 629 ENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDEN-------RDRKTHEEYGRHRARYS 477
           E  +RK  E+  R K RD +R    A+  +++E        ++RK HEEY   +A ++
Sbjct: 155 EREERKRREEE-REKKRDEERAKEEADEKAEEERLRKEREEKERKEHEEYLAMKASFA 211
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>CCAR1_XENLA (Q641G3) Cell division cycle and apoptosis regulator protein 1|
          Length = 1157

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 28/100 (28%), Positives = 36/100 (36%), Gaps = 21/100 (21%)
 Frame = -2

Query: 680  KVGEDRYDPNANRLSDDE---------NRDRKTHEDYGRHKTRD---SDRYDPNA----- 552
            K  +D   P   + SDD+          RD +  EDY      D    D Y+P A     
Sbjct: 825  KDDDDEPKPKRRKSSDDKIKLEEKEERKRDDRRKEDYREEDDPDYENQDDYEPIAAEEDD 884

Query: 551  ----NRLSDDENRDRKTHEEYGRHRARYSDSHDSKRSRYD 444
                +R  DD++   K   E  R   RYS    SK    D
Sbjct: 885  GDYDDREDDDDDSSSKDKREDKRDGNRYSKERQSKDKEKD 924
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>MDFI_HUMAN (Q99750) MyoD family inhibitor (Myogenic repressor I-mf)|
          Length = 246

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/53 (30%), Positives = 21/53 (39%)
 Frame = -3

Query: 208 QQCCIVAAVKFCLLMFVWTLSFLCGASLECVKCGAYTIMPVASCCLSHNVGRC 50
           Q+ C V  +  CL     TL   C   L+C  CG+ +      CC     G C
Sbjct: 160 QEDCCVHCILSCLFCEFLTL---CNIVLDCATCGSCSSEDSCLCCCCCGSGEC 209
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>RU17_XENTR (Q66II8) U1 small nuclear ribonucleoprotein 70 kDa (U1 snRNP 70|
           kDa) (snRNP70) (U1-70K)
          Length = 471

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -2

Query: 632 DENRDRK-THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSDSHDSKR 456
           D +RDR+ +H D  R K R+ DR   +  R   D +RDR    ++ R R R  D  + + 
Sbjct: 372 DRDRDRRRSHRDRERDKDRERDR---DRRR---DRDRDRDRDRDHKRERDR-GDRGEKRE 424

Query: 455 SRYDDS 438
            R  D+
Sbjct: 425 ERVPDN 430



 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/84 (25%), Positives = 33/84 (39%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           D  R+    R      R    E  +RK   +  R K +D D+            ++D++ 
Sbjct: 240 DKERERRRSRSRERRRRSRSREKEERKRSRERSRDKDKDKDK------------DKDKEK 287

Query: 512 HEEYGRHRARYSDSHDSKRSRYDD 441
            ++  R R R S S + KR R  D
Sbjct: 288 DKDKDRDRKRRSRSRERKRERDRD 311
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>IWS1A_XENLA (Q6DE96) IWS1-like protein A|
          Length = 836

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 28/86 (32%), Positives = 38/86 (44%), Gaps = 8/86 (9%)
 Frame = -2

Query: 671 EDRYDPNA-NRLSDDENRDRKTHE---DYG--RHKTRDSDRYDPNANRLSDD-ENRDRKT 513
           E R +P +    S+DE+ D + H+   D G    K  + D  D +  R S D EN D   
Sbjct: 33  EQRSEPGSPEHQSEDEHSDVEDHKHSSDSGSDNEKGTEHDSEDEHRPRNSSDLENHDASD 92

Query: 512 HEEYGRHRARYSDSH-DSKRSRYDDS 438
            E    H    SDS  D +R +  DS
Sbjct: 93  SENEESHNRIASDSEDDGRRQKNSDS 118
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>SECA_STAAW (Q7A1G4) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAU (O06446) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAS (Q6GB77) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAR (Q6GIN8) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAN (Q7A6R5) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAM (Q99VM2) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>SECA_STAAC (Q5HHR7) Preprotein translocase secA subunit|
          Length = 843

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/82 (24%), Positives = 43/82 (52%)
 Frame = -3

Query: 637 AMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGTGRRTKSMVDTELDTQIAMIQR 458
           A+++ G++R    M   K++I  G+   + D+A M+TG G+   + + T L+   A+  R
Sbjct: 73  ALVREGSKRVFN-MTPYKVQIMGGIAIHKGDIAEMRTGEGKTLTATMPTYLN---ALAGR 128

Query: 457 GLDMMTLITTQGGIMKSAILEM 392
           G+ ++T+      +    + E+
Sbjct: 129 GVHVITVNEYLSSVQSEEMAEL 150
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>NOG2_CRYGA (Q6TGJ8) Nucleolar GTP-binding protein 2|
          Length = 731

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 10/88 (11%)
 Frame = -2

Query: 674 GEDRYDPNANRLSDDENRDRK----THEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           GE+  + +     D+E+ D +    + +  G+ K  DSD  +  AN+        +K   
Sbjct: 633 GEEVEESDKEETDDEEDVDEEEAVPSAKQLGKRKAIDSDEEEQTANKSKRMTTNKQKATN 692

Query: 506 EY------GRHRARYSDSHDSKRSRYDD 441
            Y       R+R R    +  KRSR DD
Sbjct: 693 FYTHANVKNRNRDRKVPKNPGKRSRGDD 720
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>YG5W_YEAST (P53335) Hypothetical 31.3 kDa protein in TAF145-YOR1 intergenic|
           region
          Length = 271

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 17/78 (21%), Positives = 37/78 (47%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           R++ G+D  D + +   +D++ D+K H+ + +HK                D+ +D+K  +
Sbjct: 152 RKREGDDSEDEDDDD-KEDKDSDKKKHKKHKKHK---------------KDKKKDKKDKK 195

Query: 506 EYGRHRARYSDSHDSKRS 453
           E+ +H+         KR+
Sbjct: 196 EHKKHKKEEKRLKKEKRA 213
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>PBPA_BACSU (P39793) Penicillin-binding protein 1A/1B (PBP1) [Includes:|
            Penicillin-insensitive transglycosylase (EC 2.4.2.-)
            (Peptidoglycan TGase); Penicillin-sensitive
            transpeptidase (EC 3.4.-.-) (DD-transpeptidase)]
          Length = 914

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 17/79 (21%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
 Frame = -2

Query: 671  EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNAN-RLSDDENRDRKTHEEYGR 495
            +D    +  +  D +  D +T +D     T D D+   N N   SD+ N+D+    +   
Sbjct: 810  DDEKTQDDTQTDDSQKDDGQTDQDQTDDSTNDQDKKQDNTNTNPSDNNNQDQSNDNDNDN 869

Query: 494  HRARYSDSHDSKRSRYDDS 438
               + +   DS   + D +
Sbjct: 870  SNNQDTSDGDSNSGKNDST 888
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>FIP1_PONPY (Q5RAA7) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 588

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 477
           D +R+R    D  R +TR+ +R   + P  +  + DE R R        Y RHRA     
Sbjct: 460 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 519

Query: 476 DSHDSKRSR 450
           + H  +R R
Sbjct: 520 ERHRERRHR 528
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>FIP1_HUMAN (Q6UN15) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
           (Factor interacting with PAP) (hFip1) (Rearranged in
           hypereosinophilia)
          Length = 594

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 8/69 (11%)
 Frame = -2

Query: 632 DENRDRKTHEDYGRHKTRDSDR---YDPNANRLSDDENRDR---KTHEEYGRHRA--RYS 477
           D +R+R    D  R +TR+ +R   + P  +  + DE R R        Y RHRA     
Sbjct: 466 DRDRERDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKE 525

Query: 476 DSHDSKRSR 450
           + H  +R R
Sbjct: 526 ERHRERRHR 534
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>YR748_MIMIV (Q5UP04) Putative ankyrin repeat protein R748|
          Length = 877

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/74 (27%), Positives = 32/74 (43%)
 Frame = -2

Query: 653 NANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEEYGRHRARYSD 474
           N +    + NRD   + ++  +   D + +D     L     R  K HE Y  H++ Y  
Sbjct: 634 NISEKIPNNNRDNNCNNNHNNNIQGDKELFD---KPLHLQYTRLTKLHEHY-IHKSLYKL 689

Query: 473 SHDSKRSRYDDSYN 432
            H  K ++YD  YN
Sbjct: 690 RHPIKLNQYDTVYN 703
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>SYE_HAEIN (P43818) Glutamyl-tRNA synthetase (EC 6.1.1.17) (Glutamate--tRNA|
           ligase) (GluRS)
          Length = 480

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 3/89 (3%)
 Frame = -3

Query: 700 WKGTAEERLEKIGMTQTQTDSAMMKTGTERRMKIMVDTKLEIQIGMTQMQTDLAMMKTGT 521
           +KG A E L K+    T   S  + +  E     +  T  E+++GM ++   L +  TG+
Sbjct: 391 FKGNAAEALAKVKEKLTALSSWDLHSIHEA----IEQTAAELEVGMGKVGMPLRVAVTGS 446

Query: 520 GRRTK---SMVDTELDTQIAMIQRGLDMM 443
           G+      ++V    D  +A IQR +D +
Sbjct: 447 GQSPSMDVTLVGIGRDRVLARIQRAIDFI 475
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>SFR17_HUMAN (Q8TF01) Splicing factor, arginine/serine-rich 130|
           (Serine-arginine-rich splicing regulatory protein 130)
           (SRrp130) (SR-rich protein) (SR-related protein)
          Length = 805

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
 Frame = -2

Query: 686 RRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDR---K 516
           RR+      D   NR S   +RDR+  +D   + + +S ++   A      + R R   K
Sbjct: 616 RRRSRSRSRDRRTNRASRSRSRDRRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDK 675

Query: 515 THEEYGRHRARYSDSHDSKRSRYDDSY 435
             ++  + R R  D    K+ R +  +
Sbjct: 676 DRKKKDKEREREQDKRKEKQKREEKDF 702
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>IFH1_YEAST (P39520) Protein IFH1 (Protein RRP3)|
          Length = 1085

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 2/81 (2%)
 Frame = -2

Query: 677 VGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDS--DRYDPNANRLSDDENRDRKTHEE 504
           V  D Y  N    SDDEN   K+ +  GRHK+  S  +  +  +N +  +++ +  TH  
Sbjct: 493 VDNDEYIFNVFFQSDDENSGHKSKK--GRHKSGKSHIEHKNKGSNLIKSNDDLEPSTHS- 549

Query: 503 YGRHRARYSDSHDSKRSRYDD 441
                   S  +DS    YD+
Sbjct: 550 ----TVLNSGKYDSSDDEYDN 566
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>DR111_ARATH (P42698) DNA-damage-repair/toleration protein DRT111, chloroplast|
           precursor
          Length = 387

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -2

Query: 644 RLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRK 516
           R  +DE RD++  E+  R K R+ D  DP+   +S +E   R+
Sbjct: 133 RRQEDEERDKREREE--REKERERDNSDPSRLNISGEEAWKRR 173
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>CEA3_ECOLI (P00646) Colicin-E3 (EC 3.1.-.-) (Colicin-E3 A chain)|
           (Ribonuclease)
          Length = 551

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 24/84 (28%), Positives = 40/84 (47%), Gaps = 1/84 (1%)
 Frame = -2

Query: 683 RKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHEE 504
           RK  ED+     N L+D++N+ RK  +DYG H    + + + N   L D +    KT ++
Sbjct: 432 RKKKEDKKRSAENNLNDEKNKPRKGFKDYG-HDYHPAPKTE-NIKGLGDLKPGIPKTPKQ 489

Query: 503 Y-GRHRARYSDSHDSKRSRYDDSY 435
             G  R R++     K   +D  +
Sbjct: 490 NGGGKRKRWTGDKGRKIYEWDSQH 513
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>AP3B_SCHPO (O13939) AP-3 complex subunit beta (Beta-adaptin) (Adapter-related|
           protein complex 3 beta subunit) (Clathrin assembly
           protein large beta chain) (Clathrin assembly protein
           complex 3 beta large chain)
          Length = 745

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 15/55 (27%), Positives = 24/55 (43%)
 Frame = -2

Query: 671 EDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKTHE 507
           E  Y+ + +   D+E  D    ED  ++ T D D  + N + +S     DR   E
Sbjct: 683 EGEYETSTSESEDEETDDTSQEEDNEKNSTPDEDTENNNTSSISTKSIMDRPLTE 737
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>IWS1_RAT (Q3SWT4) IWS1-like protein|
          Length = 764

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 19/81 (23%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
 Frame = -2

Query: 692 DSRRKVGEDRYDPNANRLSDDENRDRKTHEDYGRHKTRDSDRYDPNANRLSDDENRDRKT 513
           +S    GE++ + +  +   D + DRK     G H + DS+  +P   ++  D++ +++ 
Sbjct: 276 ESEDSDGENKREDSEVQNESDGHADRK-----GLHSS-DSEEEEPKRQKIDSDDDGEKEG 329

Query: 512 HEEYGRHRAR-YSDSHDSKRS 453
            E+  + +A   SDS D  ++
Sbjct: 330 DEKVAKRKAAVLSDSEDEDKA 350


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 89,739,394
Number of Sequences: 219361
Number of extensions: 1687654
Number of successful extensions: 5138
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 4307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4946
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 8635968108
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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