ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13e19 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478504.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2093 Score = 373 bits (188), Expect = e-100 Identities = 281/312 (90%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 1730 gaactgctcttcagtaactcctttgcccatggcggcggtagaggagatgccaccctgcac 1671 Query: 374 ggtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctc 433 ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 1670 ggtcttgagcaccctgtcgtagaagttggcgcccgaccacttctggtgctgcagcgtctc 1611 Query: 434 cactccattcctcctctcctcccgctggatcctctccacgtaggccagcatgccgcgccg 493 ||| || || ||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1610 cacgccgttgctcctctcctccctctggatcctctccacgtacgccagcatgccgcgccg 1551 Query: 494 ggcgaagtcccgcgcgaacgtgtcggtgacgagcgcgtcggcgtggaacccggccagcgt 553 |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1550 cgcgaagtcgcgggcgaacgtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgt 1491 Query: 554 gatgaactgccatacgtagccgagcttggcgacatgcgggatgaacgccgccatgtcggc 613 |||||||||||| ||||| || ||| | || || ||||||||||| ||| ||||||||| Sbjct: 1490 gatgaactgccacacgtaccccagcctcgccacgcgcgggatgaactccgacatgtcggc 1431 Query: 614 gtccgtcatgcc 625 |||||||||||| Sbjct: 1430 gtccgtcatgcc 1419 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 1799 tcatcacatcctggatttggcaagaacatg 1770
>ref|XM_506381.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0007H12.40 mRNA Length = 2154 Score = 373 bits (188), Expect = e-100 Identities = 281/312 (90%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 1709 gaactgctcttcagtaactcctttgcccatggcggcggtagaggagatgccaccctgcac 1650 Query: 374 ggtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctc 433 ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 1649 ggtcttgagcaccctgtcgtagaagttggcgcccgaccacttctggtgctgcagcgtctc 1590 Query: 434 cactccattcctcctctcctcccgctggatcctctccacgtaggccagcatgccgcgccg 493 ||| || || ||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1589 cacgccgttgctcctctcctccctctggatcctctccacgtacgccagcatgccgcgccg 1530 Query: 494 ggcgaagtcccgcgcgaacgtgtcggtgacgagcgcgtcggcgtggaacccggccagcgt 553 |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1529 cgcgaagtcgcgggcgaacgtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgt 1470 Query: 554 gatgaactgccatacgtagccgagcttggcgacatgcgggatgaacgccgccatgtcggc 613 |||||||||||| ||||| || ||| | || || ||||||||||| ||| ||||||||| Sbjct: 1469 gatgaactgccacacgtaccccagcctcgccacgcgcgggatgaactccgacatgtcggc 1410 Query: 614 gtccgtcatgcc 625 |||||||||||| Sbjct: 1409 gtccgtcatgcc 1398 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 1778 tcatcacatcctggatttggcaagaacatg 1749
>dbj|AK103744.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033138N10, full insert sequence Length = 2092 Score = 373 bits (188), Expect = e-100 Identities = 281/312 (90%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 1729 gaactgctcttcagtaactcctttgcccatggcggcggtagaggagatgccaccctgcac 1670 Query: 374 ggtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctc 433 ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 1669 ggtcttgagcaccctgtcgtagaagttggcgcccgaccacttctggtgctgcagcgtctc 1610 Query: 434 cactccattcctcctctcctcccgctggatcctctccacgtaggccagcatgccgcgccg 493 ||| || || ||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1609 cacgccgttgctcctctcctccctctggatcctctccacgtacgccagcatgccgcgccg 1550 Query: 494 ggcgaagtcccgcgcgaacgtgtcggtgacgagcgcgtcggcgtggaacccggccagcgt 553 |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1549 cgcgaagtcgcgggcgaacgtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgt 1490 Query: 554 gatgaactgccatacgtagccgagcttggcgacatgcgggatgaacgccgccatgtcggc 613 |||||||||||| ||||| || ||| | || || ||||||||||| ||| ||||||||| Sbjct: 1489 gatgaactgccacacgtaccccagcctcgccacgcgcgggatgaactccgacatgtcggc 1430 Query: 614 gtccgtcatgcc 625 |||||||||||| Sbjct: 1429 gtccgtcatgcc 1418 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 1798 tcatcacatcctggatttggcaagaacatg 1769
>dbj|AK063353.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-114-C03, full insert sequence Length = 2154 Score = 373 bits (188), Expect = e-100 Identities = 281/312 (90%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 1709 gaactgctcttcagtaactcctttgcccatggcggcggtagaggagatgccaccctgcac 1650 Query: 374 ggtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctc 433 ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 1649 ggtcttgagcaccctgtcgtagaagttggcgcccgaccacttctggtgctgcagcgtctc 1590 Query: 434 cactccattcctcctctcctcccgctggatcctctccacgtaggccagcatgccgcgccg 493 ||| || || ||||||||||||| |||||||||||||||||| ||||||||||||||||| Sbjct: 1589 cacgccgttgctcctctcctccctctggatcctctccacgtacgccagcatgccgcgccg 1530 Query: 494 ggcgaagtcccgcgcgaacgtgtcggtgacgagcgcgtcggcgtggaacccggccagcgt 553 |||||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| Sbjct: 1529 cgcgaagtcgcgggcgaacgtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgt 1470 Query: 554 gatgaactgccatacgtagccgagcttggcgacatgcgggatgaacgccgccatgtcggc 613 |||||||||||| ||||| || ||| | || || ||||||||||| ||| ||||||||| Sbjct: 1469 gatgaactgccacacgtaccccagcctcgccacgcgcgggatgaactccgacatgtcggc 1410 Query: 614 gtccgtcatgcc 625 |||||||||||| Sbjct: 1409 gtccgtcatgcc 1398 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 1778 tcatcacatcctggatttggcaagaacatg 1749
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 343 bits (173), Expect = 4e-91 Identities = 263/293 (89%) Strand = Plus / Plus Query: 333 ccttttcccatggctgcggttgaggacatgccgccctgcacggtcttgagcaccctatca 392 ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 20638153 cctttgcccatggcggcggtagaggagatgccaccctgcacggtcttgagcaccctgtcg 20638212 Query: 393 tagaagttggcacccgaccacttctggtgctccagagtctccactccattcctcctctcc 452 ||||||||||| ||||||||||||||||||| ||| |||||||| || || ||||||||| Sbjct: 20638213 tagaagttggcgcccgaccacttctggtgctgcagcgtctccacgccgttgctcctctcc 20638272 Query: 453 tcccgctggatcctctccacgtaggccagcatgccgcgccgggcgaagtcccgcgcgaac 512 |||| |||||||||||||||||| ||||||||||||||||| |||||||| || |||||| Sbjct: 20638273 tccctctggatcctctccacgtacgccagcatgccgcgccgcgcgaagtcgcgggcgaac 20638332 Query: 513 gtgtcggtgacgagcgcgtcggcgtggaacccggccagcgtgatgaactgccatacgtag 572 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 20638333 gtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgtgatgaactgccacacgtac 20638392 Query: 573 ccgagcttggcgacatgcgggatgaacgccgccatgtcggcgtccgtcatgcc 625 || ||| | || || ||||||||||| ||| ||||||||||||||||||||| Sbjct: 20638393 cccagcctcgccacgcgcgggatgaactccgacatgtcggcgtccgtcatgcc 20638445 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 20637928 tcatcacatcctggatttggcaagaacatg 20637957 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 5813618 ttcctcctctcctcccgctgg 5813638
>dbj|AP004990.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0007H12 Length = 150881 Score = 343 bits (173), Expect = 4e-91 Identities = 263/293 (89%) Strand = Plus / Plus Query: 333 ccttttcccatggctgcggttgaggacatgccgccctgcacggtcttgagcaccctatca 392 ||||| |||||||| ||||| ||||| ||||| ||||||||||||||||||||||| || Sbjct: 129232 cctttgcccatggcggcggtagaggagatgccaccctgcacggtcttgagcaccctgtcg 129291 Query: 393 tagaagttggcacccgaccacttctggtgctccagagtctccactccattcctcctctcc 452 ||||||||||| ||||||||||||||||||| ||| |||||||| || || ||||||||| Sbjct: 129292 tagaagttggcgcccgaccacttctggtgctgcagcgtctccacgccgttgctcctctcc 129351 Query: 453 tcccgctggatcctctccacgtaggccagcatgccgcgccgggcgaagtcccgcgcgaac 512 |||| |||||||||||||||||| ||||||||||||||||| |||||||| || |||||| Sbjct: 129352 tccctctggatcctctccacgtacgccagcatgccgcgccgcgcgaagtcgcgggcgaac 129411 Query: 513 gtgtcggtgacgagcgcgtcggcgtggaacccggccagcgtgatgaactgccatacgtag 572 ||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| Sbjct: 129412 gtgtccgtgacgagcgcgtcggcgtggaacccggcgagcgtgatgaactgccacacgtac 129471 Query: 573 ccgagcttggcgacatgcgggatgaacgccgccatgtcggcgtccgtcatgcc 625 || ||| | || || ||||||||||| ||| ||||||||||||||||||||| Sbjct: 129472 cccagcctcgccacgcgcgggatgaactccgacatgtcggcgtccgtcatgcc 129524 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Plus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 129007 tcatcacatcctggatttggcaagaacatg 129036
>gb|AF251075.1|AF251075 Oryza sativa isocitrate lyase mRNA, partial cds Length = 491 Score = 200 bits (101), Expect = 4e-48 Identities = 146/161 (90%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||||||||||||| ||||||| |||||||| ||||| ||||| ||||| |||||||| Sbjct: 161 gaactgctcttcagtaactcctttgcccatggcggcggtagaggagatgccaccctgcac 102 Query: 374 ggtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctc 433 ||||||||||||||| || ||||||||||| ||||||||||||||||||| ||| ||||| Sbjct: 101 ggtcttgagcaccctgtcgtagaagttggcgcccgaccacttctggtgctgcagcgtctc 42 Query: 434 cactccattcctcctctcctcccgctggatcctctccacgt 474 ||| || || ||||||||||||| ||||||||||||||||| Sbjct: 41 cacgccgttgctcctctcctccctctggatcctctccacgt 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 29/30 (96%) Strand = Plus / Minus Query: 251 tcatcacatcctggacttggcaagaacatg 280 ||||||||||||||| |||||||||||||| Sbjct: 230 tcatcacatcctggatttggcaagaacatg 201
>ref|XM_501923.1| Yarrowia lipolytica CLIB122, YALI0C16885g predicted mRNA Length = 1623 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 543 ccggccagcgtgatgaactgccatacgtagccgagcttggc 583 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 1379 ccggccagagtgatgaactgccacacgtagccgagcttggc 1339
>emb|X72848.1|YLICL1A Y.lipolytica ICL1 gene for isocitrate lyase Length = 4450 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 543 ccggccagcgtgatgaactgccatacgtagccgagcttggc 583 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 3918 ccggccagagtgatgaactgccacacgtagccgagcttggc 3878
>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica Length = 3272609 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 543 ccggccagcgtgatgaactgccatacgtagccgagcttggc 583 |||||||| |||||||||||||| ||||||||||||||||| Sbjct: 2383100 ccggccagagtgatgaactgccacacgtagccgagcttggc 2383060
>gb|L02330.1|SOYICL2A Glycine max glyoxysomal isocitrate lyase isoform 2 (ICL2) mRNA, 3' end Length = 1992 Score = 60.0 bits (30), Expect = 9e-06 Identities = 126/158 (79%) Strand = Plus / Minus Query: 315 aactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcacg 374 |||||||||||||| ||||||||||||| || || ||||| | || || ||||| || Sbjct: 1600 aactgctcttcagttactccttttcccattgcagcagttgaagccacacctccctggaca 1541 Query: 375 gtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctcc 434 |||||||| |||||||||| |||| ||||| | ||| |||||||| | || || || Sbjct: 1540 gtcttgagatacctatcatagtagttagcaccagcccatttctggtgagcaagtgtgtca 1481 Query: 435 actccattcctcctctcctcccgctggatcctctccac 472 || ||||| |||||||||| | ||| ||||||||||| Sbjct: 1480 accccattgttcctctcctctctctgaatcctctccac 1443
>gb|L02329.1|SOYICL1A Glycine max glyoxysomal isocitrate lyase isoform 1 (ICL1) mRNA, 3' end Length = 1871 Score = 52.0 bits (26), Expect = 0.002 Identities = 134/170 (78%) Strand = Plus / Minus Query: 315 aactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcacg 374 |||||||||||||| ||||||||||||| || || ||||| | || || ||||| || Sbjct: 1603 aactgctcttcagttactccttttcccattgcagcagttgaagccacacctccctggaca 1544 Query: 375 gtcttgagcaccctatcatagaagttggcacccgaccacttctggtgctccagagtctcc 434 |||||||| |||||||||| | || ||||| | ||| || ||||| | || || || Sbjct: 1543 gtcttgaggtacctatcatagtaattagcaccagcccatttttggtgagctagtgtgtca 1484 Query: 435 actccattcctcctctcctcccgctggatcctctccacgtaggccagcat 484 || ||||| |||||||||| | ||| ||||||||||| || |||||||| Sbjct: 1483 accccattgttcctctcctctctctgaatcctctccacataagccagcat 1434
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||||||||||||||| Sbjct: 3086637 gcgtggaagccggccagcgtgatgaactg 3086609
>emb|BX640447.1| Bordetella bronchiseptica strain RB50, complete genome; segment 11/16 Length = 349442 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Plus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||||||||||||||| Sbjct: 83879 gcgtggaaaccggccagcgtgatgaactg 83907
>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14 Length = 348525 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||||||||||||||| Sbjct: 153852 gcgtggaaaccggccagcgtgatgaactg 153824
>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12 Length = 348934 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||||||||||||||| Sbjct: 125092 gcgtggaagccggccagcgtgatgaactg 125064
>dbj|AK107356.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H12, full insert sequence Length = 1828 Score = 50.1 bits (25), Expect = 0.009 Identities = 31/33 (93%) Strand = Plus / Minus Query: 549 agcgtgatgaactgccatacgtagccgagcttg 581 ||||||||||||||||| ||| ||||||||||| Sbjct: 1508 agcgtgatgaactgccacacgaagccgagcttg 1476
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 50.1 bits (25), Expect = 0.009 Identities = 28/29 (96%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||||||||||||||| Sbjct: 4422291 gcgtggaagccggccagcgtgatgaactg 4422263 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 588 tgcgggatgaacgccgccatgtcgg 612 ||||||||||||||||||| ||||| Sbjct: 4721814 tgcgggatgaacgccgccacgtcgg 4721790
>emb|X62697.1|NCACU3 N.crassa acu-3 gene for isocitrate lyase Length = 2098 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 400 tggcacccgaccacttctggtgct 423 |||||||||||||||||||||||| Sbjct: 1935 tggcacccgaccacttctggtgct 1912 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 gtgatgaactgccatacgtagccgagcttggcga 585 |||||||||||||| ||||||||||||||||| Sbjct: 1783 gtgatgaactgccagcagtagccgagcttggcga 1750
>gb|AC117569.3| Homo sapiens chromosome 18, clone RP11-784B15, complete sequence Length = 176898 Score = 48.1 bits (24), Expect = 0.035 Identities = 24/24 (100%) Strand = Plus / Minus Query: 219 ctttcttcttaatcattattcctt 242 |||||||||||||||||||||||| Sbjct: 11076 ctttcttcttaatcattattcctt 11053
>gb|AF193815.1|AF193815 Dendrobium crumenatum isocitrate lyase (Icl) mRNA, complete cds Length = 1974 Score = 48.1 bits (24), Expect = 0.035 Identities = 117/148 (79%) Strand = Plus / Minus Query: 333 ccttttcccatggctgcggttgaggacatgccgccctgcacggtcttgagcaccctatca 392 |||||||||||||| || || || || || ||||||||||| |||||||| || |||| Sbjct: 1670 ccttttcccatggcggcagtggaagagattccgccctgcacagtcttgagataccgatca 1611 Query: 393 tagaagttggcacccgaccacttctggtgctccagagtctccactccattcctcctctcc 452 || | || || ||||||||||| || || |||| || ||||| || || |||||||| Sbjct: 1610 taataattcgcccccgaccacttttgatgagccagcgtatccacaccgttgttcctctcc 1551 Query: 453 tcccgctggatcctctccacgtaggcca 480 |||| ||| ||||| || || ||||||| Sbjct: 1550 tccctctgtatcctttcaacataggcca 1523
>emb|AJ421510.1|REU421510 Ralstonia eutropha aceA1 gene for isocitrate lyase Length = 1680 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Minus Query: 536 gtggaacccggccagcgtgatgaactg 562 |||||| |||||||||||||||||||| Sbjct: 1224 gtggaagccggccagcgtgatgaactg 1198
>gb|M17145.1|RCCICL4 Castor bean (R.communis) isocitrate lyase mRNA, complete cds Length = 2036 Score = 46.1 bits (23), Expect = 0.14 Identities = 80/99 (80%) Strand = Plus / Minus Query: 386 cctatcatagaagttggcacccgaccacttctggtgctccagagtctccactccattcct 445 ||||||||| |||| ||||| ||||| ||||| || | ||||| || || ||||| | Sbjct: 1604 cctatcataatagttagcaccggaccatttctgatgggcaagagtgtcaaccccattttt 1545 Query: 446 cctctcctcccgctggatcctctccacgtaggccagcat 484 ||| ||||| | ||||||||||||||| || |||||||| Sbjct: 1544 cctttcctctctctggatcctctccacatatgccagcat 1506
>dbj|D78256.1| Cucurbita cv. Kurokawa Amakuri mRNA for Isocitrate Lyase, complete cds Length = 1983 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 531 tcggcgtggaacccggccagcgtgatgaactgcca 565 ||||||||||| || |||||||| ||||||||||| Sbjct: 1471 tcggcgtggaaacctgccagcgttatgaactgcca 1437
>ref|NM_113067.2| Arabidopsis thaliana catalytic/ isocitrate lyase AT3G21720 mRNA, complete cds Length = 2086 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||| |||||||| | ||||||||||||||||| || ||||| || || || || || Sbjct: 1723 gaactgttcttcagtgacaccttttcccatggctgcagtggaggagattccaccttggac 1664 Query: 374 ggtctt 379 |||||| Sbjct: 1663 ggtctt 1658
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 537 tggaacccggccagcgtgatgaactg 562 ||||| |||||||||||||||||||| Sbjct: 560030 tggaagccggccagcgtgatgaactg 560005
>ref|XM_323569.1| Neurospora crassa OR74A ISOCITRATE LYASE (ISOCITRATASE) (ICL) [MIPS] (NCU04230.1) partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 gtgatgaactgccatacgtagccgagcttggcga 585 |||||||||||||| ||||||||||||||||| Sbjct: 1403 gtgatgaactgccagcagtagccgagcttggcga 1370 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 tggcacccgaccacttctggtgct 423 |||| ||||||||||||||||||| Sbjct: 1555 tggcgcccgaccacttctggtgct 1532
>ref|XM_955761.1| Neurospora crassa OR74A ISOCITRATE LYASE (ISOCITRATASE) (ICL) [MIPS] (NCU04230.1) partial mRNA Length = 1647 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 gtgatgaactgccatacgtagccgagcttggcga 585 |||||||||||||| ||||||||||||||||| Sbjct: 1403 gtgatgaactgccagcagtagccgagcttggcga 1370 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 tggcacccgaccacttctggtgct 423 |||| ||||||||||||||||||| Sbjct: 1555 tggcgcccgaccacttctggtgct 1532
>ref|XM_658146.1| Aspergillus nidulans FGSC A4 isocitrate lyase (AN5634.2), mRNA Length = 1617 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 agttggcacccgaccacttctggtgc 422 |||||||||| ||||||||||||||| Sbjct: 1525 agttggcaccagaccacttctggtgc 1500
>gb|AY261365.1| African swine fever virus isolate Warmbaths, complete genome Length = 190773 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 ttttattatatccaattatctt 214 |||||||||||||||||||||| Sbjct: 5001 ttttattatatccaattatctt 5022
>gb|AY261364.1| African swine fever virus isolate Tengani 62, complete genome Length = 185689 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 ttttattatatccaattatctt 214 |||||||||||||||||||||| Sbjct: 5165 ttttattatatccaattatctt 5186
>gb|BT010397.1| Arabidopsis thaliana At3g21720 mRNA, complete cds Length = 1731 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||| |||||||| | ||||||||||||||||| || ||||| || || || || || Sbjct: 1653 gaactgttcttcagtgacaccttttcccatggctgcagtggaggagattccaccttggac 1594 Query: 374 ggtctt 379 |||||| Sbjct: 1593 ggtctt 1588
>emb|BX842573.1| Mycobacterium tuberculosis H37Rv complete genome; segment 2/13 Length = 342416 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 537 tggaacccggccagcgtgatgaactg 562 ||||| |||||||||||||||||||| Sbjct: 216674 tggaagccggccagcgtgatgaactg 216649
>emb|BX294151.1| Pirellula sp. strain 1 complete genome; segment 19/24 Length = 295650 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Minus Query: 420 tgctccagagtctccactccat 441 |||||||||||||||||||||| Sbjct: 239474 tgctccagagtctccactccat 239453
>emb|BX248335.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 2/14 Length = 324050 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 537 tggaacccggccagcgtgatgaactg 562 ||||| |||||||||||||||||||| Sbjct: 216600 tggaagccggccagcgtgatgaactg 216575
>emb|AL807369.1|NCG15D1 Neurospora crassa DNA linkage group V cosmid contig G15D1 Length = 62178 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 gtgatgaactgccatacgtagccgagcttggcga 585 |||||||||||||| ||||||||||||||||| Sbjct: 50720 gtgatgaactgccagcagtagccgagcttggcga 50687 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 tggcacccgaccacttctggtgct 423 |||| ||||||||||||||||||| Sbjct: 50872 tggcgcccgaccacttctggtgct 50849
>emb|AL451022.1|NC2E4 Neurospora crassa DNA linkage group V Cosmid contig 2E4 Length = 62070 Score = 44.1 bits (22), Expect = 0.55 Identities = 31/34 (91%) Strand = Plus / Minus Query: 552 gtgatgaactgccatacgtagccgagcttggcga 585 |||||||||||||| ||||||||||||||||| Sbjct: 4602 gtgatgaactgccagcagtagccgagcttggcga 4569 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 400 tggcacccgaccacttctggtgct 423 |||| ||||||||||||||||||| Sbjct: 4754 tggcgcccgaccacttctggtgct 4731
>gb|AY140000.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 2087 Score = 44.1 bits (22), Expect = 0.55 Identities = 55/66 (83%) Strand = Plus / Minus Query: 314 gaactgctcttcagtagctccttttcccatggctgcggttgaggacatgccgccctgcac 373 |||||| |||||||| | ||||||||||||||||| || ||||| || || || || || Sbjct: 1725 gaactgttcttcagtgacaccttttcccatggctgcagtggaggagattccaccttggac 1666 Query: 374 ggtctt 379 |||||| Sbjct: 1665 ggtctt 1660
>gb|AY261363.1| African swine fever virus isolate Pretorisuskop/96/4, complete genome Length = 190324 Score = 44.1 bits (22), Expect = 0.55 Identities = 22/22 (100%) Strand = Plus / Plus Query: 193 ttttattatatccaattatctt 214 |||||||||||||||||||||| Sbjct: 5774 ttttattatatccaattatctt 5795
>emb|CT573100.6| Mouse DNA sequence from clone RP23-218E7 on chromosome 12, complete sequence Length = 183966 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 213 ttggagctttcttcttaatcattatt 238 ||||||||||||| |||||||||||| Sbjct: 12837 ttggagctttctttttaatcattatt 12862
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 537 tggaacccggccagcgtgatgaactg 562 ||||| |||||||||||||||||||| Sbjct: 1449034 tggaagccggccagcgtgatgaactg 1449009 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgt 553 |||||||||||||||||||| Sbjct: 533925 gcgtggaacccggccagcgt 533906
>emb|X62696.1|ANACUD A.nidulans acuD gene for isocitrate lyase Length = 2449 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 397 agttggcacccgaccacttctggtgc 422 |||||||||| ||||||||||||||| Sbjct: 2120 agttggcaccagaccacttctggtgc 2095
>gb|AC099029.2| Drosophila melanogaster clone BACR09J12, complete sequence Length = 189618 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 aggccagcatgccgcgccggg 495 ||||||||||||||||||||| Sbjct: 128320 aggccagcatgccgcgccggg 128300
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 18339178 ttcctcctctcctcccgctgg 18339198 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 18320644 ttcctcctctcctcccgctgg 18320664 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||| |||||||||||||||| Sbjct: 16110786 ccactcccttcctcctctcctccc 16110763
>gb|AC106887.3| Oryza sativa chromosome 3 BAC OSJNBa0054H04 genomic sequence, complete sequence Length = 159579 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 105609 ttcctcctctcctcccgctgg 105629 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 87075 ttcctcctctcctcccgctgg 87095
>gb|AC091548.11| Mus musculus Strain C57BL6/J Chromosome 11 BAC, RP23-193K14, complete sequence Length = 214157 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 440 attcctcctctcctcccgctg 460 ||||||||||||||||||||| Sbjct: 189380 attcctcctctcctcccgctg 189400
>gb|AY724681.1| Xanthomonas campestris pv. campestris str. 8004 isocitrate lyase (aceA) gene, complete cds Length = 1326 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||| ||||||||||| Sbjct: 1079 gcgtggaagccggccagggtgatgaactg 1051
>ref|XM_506117.1| Yarrowia lipolytica CLIB122, YALI0F31999g predicted mRNA Length = 1698 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 agttggcacccgaccacttctggtg 421 |||||||||| |||||||||||||| Sbjct: 1612 agttggcaccggaccacttctggtg 1588
>emb|BX548155.1|OSJN00293 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0041A24, complete sequence Length = 50879 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 17041 ttcctcctctcctcccgctgg 17021
>gb|AC010445.6| Homo sapiens chromosome 5 clone CTD-2234B20, complete sequence Length = 117072 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 206 aattatcttggagctttcttc 226 ||||||||||||||||||||| Sbjct: 3885 aattatcttggagctttcttc 3905
>gb|AE006033.1| Caulobacter crescentus CB15 section 359 of 359 of the complete genome Length = 8050 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 478 ccagcatgccgcgccgggcga 498 ||||||||||||||||||||| Sbjct: 3203 ccagcatgccgcgccgggcga 3183
>gb|AE012120.1| Xanthomonas campestris pv. campestris str. ATCC 33913, section 28 of 460 of the complete genome Length = 11505 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||| ||||||||||| Sbjct: 1187 gcgtggaagccggccagggtgatgaactg 1159
>ref|NM_136711.2| Drosophila melanogaster CG11866-RA (CG11866), mRNA Length = 2491 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 aggccagcatgccgcgccggg 495 ||||||||||||||||||||| Sbjct: 782 aggccagcatgccgcgccggg 802
>gb|AC109455.2| Homo sapiens chromosome 5 clone RP11-221D10, complete sequence Length = 155867 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 206 aattatcttggagctttcttc 226 ||||||||||||||||||||| Sbjct: 19550 aattatcttggagctttcttc 19530
>gb|AC092017.2| Homo sapiens chromosome 1 clone RP11-543B16, complete sequence Length = 193041 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 4 aattggacttgtccttttatt 24 ||||||||||||||||||||| Sbjct: 141485 aattggacttgtccttttatt 141505
>gb|AY060879.1| Drosophila melanogaster GM04147 full length cDNA Length = 2462 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 aggccagcatgccgcgccggg 495 ||||||||||||||||||||| Sbjct: 744 aggccagcatgccgcgccggg 764
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome Length = 5148708 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||| ||||||||||| Sbjct: 299889 gcgtggaagccggccagggtgatgaactg 299861
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 22072349 ttcctcctctcctcccgctgg 22072329 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcctctcctcccgctggatc 464 |||||||||||||||||||| Sbjct: 12134506 tcctctcctcccgctggatc 12134525
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 6828946 ttcctcctctcctcccgctgg 6828926
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 26792791 ttcctcctctcctcccgctgg 26792811 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 14971928 ttcctcctctcctcccgctgg 14971908
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 18333219 ttcctcctctcctcccgctgg 18333239 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 18314685 ttcctcctctcctcccgctgg 18314705 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||| |||||||||||||||| Sbjct: 16105319 ccactcccttcctcctctcctccc 16105296
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 516 tcggtgacgagcgcgtcggcg 536 ||||||||||||||||||||| Sbjct: 3599783 tcggtgacgagcgcgtcggcg 3599803
>dbj|AP003943.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1119_B04 Length = 151721 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 120646 ttcctcctctcctcccgctgg 120666
>dbj|AP005769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0051O02 Length = 169532 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 47417 ttcctcctctcctcccgctgg 47437
>dbj|AP004755.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0543C04 Length = 147889 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 69989 ttcctcctctcctcccgctgg 69969
>gb|AE003831.3| Drosophila melanogaster chromosome 2R, section 19 of 73 of the complete sequence Length = 275390 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 475 aggccagcatgccgcgccggg 495 ||||||||||||||||||||| Sbjct: 271709 aggccagcatgccgcgccggg 271729
>emb|CT025833.1| Acinetobacter baumannii str. SDF. Genomics of Multi-Drug Resistance in Acinetobacter baumannii Length = 30001 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 218 gctttcttcttaatcattatt 238 ||||||||||||||||||||| Sbjct: 3553 gctttcttcttaatcattatt 3533
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 521 gacgagcgcgtcggcgtggaa 541 ||||||||||||||||||||| Sbjct: 2632114 gacgagcgcgtcggcgtggaa 2632094 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Plus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| ||||| |||||||||||||| Sbjct: 2261754 gcgtggaagccggcgagcgtgatgaactg 2261782
>gb|AC005974.1|AC005974 Drosophila melanogaster, chromosome 2R, region 46E1-46F6, P1 clones DS05033, DS01913, and DS05181, complete sequence Length = 158983 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 475 aggccagcatgccgcgccggg 495 ||||||||||||||||||||| Sbjct: 93464 aggccagcatgccgcgccggg 93444
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 534 gcgtggaacccggccagcgtgatgaactg 562 |||||||| |||||||| ||||||||||| Sbjct: 841298 gcgtggaagccggccagggtgatgaactg 841270
>gb|U39807.1|PTU39807 Pinus taeda isocitrate lyase (ICL 8) mRNA, complete cds Length = 2017 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 agttggcacccgaccacttctggtg 421 |||||||||||||||| |||||||| Sbjct: 1657 agttggcacccgaccatttctggtg 1633
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 6828825 ttcctcctctcctcccgctgg 6828805
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 441 ttcctcctctcctcccgctgg 461 ||||||||||||||||||||| Sbjct: 133092 ttcctcctctcctcccgctgg 133112
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 397 agttggcacccgaccacttctggtg 421 |||||||||| |||||||||||||| Sbjct: 3964161 agttggcaccggaccacttctggtg 3964137
>emb|AL645861.12| Mouse DNA sequence from clone RP23-184G6 on chromosome 11, complete sequence Length = 212385 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 440 attcctcctctcctcccgctg 460 ||||||||||||||||||||| Sbjct: 133035 attcctcctctcctcccgctg 133015
>dbj|AB070940.1| Streptomyces avermitilis oligomycin biosynthetic gene cluster Length = 104326 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 516 tcggtgacgagcgcgtcggcg 536 ||||||||||||||||||||| Sbjct: 38022 tcggtgacgagcgcgtcggcg 38002
>gb|AC084380.9| Oryza sativa chromosome 3 BAC OSJNBa0090P23 genomic sequence, complete sequence Length = 126163 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||| |||||||||||||||| Sbjct: 35966 ccactcccttcctcctctcctccc 35943
>gb|AC109157.10| Mus musculus chromosome 7, clone RP24-169M16, complete sequence Length = 164968 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 actgctcttcagtagctcct 335 |||||||||||||||||||| Sbjct: 69889 actgctcttcagtagctcct 69908
>ref|NM_189087.1| Oryza sativa (japonica cultivar-group), mRNA Length = 591 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 446 cctctcctcccgctggatcc 465 |||||||||||||||||||| Sbjct: 489 cctctcctcccgctggatcc 470
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 544 cggccagcgtgatgaactgc 563 |||||||||||||||||||| Sbjct: 346185 cggccagcgtgatgaactgc 346166
>ref|NM_184612.1| Oryza sativa (japonica cultivar-group), mRNA Length = 654 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||| |||||||||||||||| Sbjct: 152 ccactcccttcctcctctcctccc 129
>ref|XM_363143.1| Magnaporthe grisea 70-15 predicted protein (MG08727.4) partial cds Length = 903 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 26 acaagctgaatgacatcgtc 45 |||||||||||||||||||| Sbjct: 833 acaagctgaatgacatcgtc 852
>ref|XM_960317.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial mRNA Length = 2574 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gccagcatgccgcgccgggc 496 |||||||||||||||||||| Sbjct: 629 gccagcatgccgcgccgggc 610
>ref|XM_330210.1| Neurospora crassa OR74A hypothetical protein (NCU03024.1) partial mRNA Length = 2574 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gccagcatgccgcgccgggc 496 |||||||||||||||||||| Sbjct: 629 gccagcatgccgcgccgggc 610
>gb|AC106705.7| Homo sapiens 3 BAC RP11-262L17 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 100464 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 tccattcctcctctcctccc 456 |||||||||||||||||||| Sbjct: 48454 tccattcctcctctcctccc 48435
>emb|CR388017.7| Zebrafish DNA sequence from clone CH211-283H24 in linkage group 7, complete sequence Length = 111978 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 58 cccaattttacataccgaattgga 81 |||||||||| ||||||||||||| Sbjct: 27180 cccaattttaaataccgaattgga 27203
>gb|AC119803.10| Mus musculus chromosome 6, clone RP23-124H21, complete sequence Length = 197762 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 433 ccactccattcctcctctcctccc 456 ||||||||| |||||||||||||| Sbjct: 185209 ccactccatccctcctctcctccc 185232
>gb|AC092496.3| Bos taurus clone RP42-394P20, complete sequence Length = 216538 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 266 cttggcaagaacatgttgag 285 |||||||||||||||||||| Sbjct: 44924 cttggcaagaacatgttgag 44943
>emb|AL606840.5| Human DNA sequence from clone RP11-424B12 on chromosome 6, complete sequence Length = 32178 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tgtgacctgatggcactttt 196 |||||||||||||||||||| Sbjct: 30662 tgtgacctgatggcactttt 30681
>emb|AL671966.1| Human DNA sequence from clone RP11-544L8 on chromosome 6 Contains part of a putative novel gene, complete sequence Length = 61913 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 tgtgacctgatggcactttt 196 |||||||||||||||||||| Sbjct: 484 tgtgacctgatggcactttt 503
>emb|AL390879.20| Human DNA sequence from clone RP11-308D16 on chromosome Xq25-27.1 Contains the 3' end of a novel gene, a serine/arginine repetitive matrix 1 (SRRM1) pseudogene (LOC347480), the GPR101 gene for G protein-coupled receptor 101 and four CpG islands, complete sequence Length = 172280 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 434 cactccattcctcctctcct 453 |||||||||||||||||||| Sbjct: 150730 cactccattcctcctctcct 150749
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 523 cgagcgcgtcggcgtggaac 542 |||||||||||||||||||| Sbjct: 2392432 cgagcgcgtcggcgtggaac 2392413
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 572 gccgagcttggcgacatgcgggatgaac 599 |||||||||||||||| |||||| |||| Sbjct: 2785662 gccgagcttggcgacaggcgggacgaac 2785635
>emb|X52136.1|GHICL Cotton mRNA for cottonseed isocitrate lyase (ICL) (EC 4.1.3.1) Length = 1872 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 387 ctatcatagaagttggcacccgaccacttctggtgctccagagtctccactccatt 442 |||||||| ||||||||||| ||||| || ||||| ||| || ||||||||||| Sbjct: 1640 ctatcataaaagttggcacctgaccatttttggtgagccaatgtgtccactccatt 1585
>emb|BX842626.1| Neurospora crassa DNA linkage group I BAC clone B18P24 Length = 75337 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 477 gccagcatgccgcgccgggc 496 |||||||||||||||||||| Sbjct: 46133 gccagcatgccgcgccgggc 46114
>emb|BX640411.1| Bordetella pertussis strain Tohama I, complete genome; segment 1/12 Length = 346359 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 518 ggtgacgagcgcgtcggcgt 537 |||||||||||||||||||| Sbjct: 58648 ggtgacgagcgcgtcggcgt 58629
>emb|AL662975.3|OSJN00180 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0071G03, complete sequence Length = 135169 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 445 tcctctcctcccgctggatc 464 |||||||||||||||||||| Sbjct: 63056 tcctctcctcccgctggatc 63075
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||||| |||||||||||||| Sbjct: 173071 ccactccatccctcctctcctccc 173048
>gb|AC012384.16| Homo sapiens 12q24.1-118.9-120.5 BAC RP11-256L11 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170118 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tctggtgctccagagtctcc 434 |||||||||||||||||||| Sbjct: 139587 tctggtgctccagagtctcc 139568
>gb|AF420484.1|AF420484 Coccidioides immitis isocitrate lyase gene, complete cds Length = 4847 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gccagcgtgatgaactgcca 565 |||||||||||||||||||| Sbjct: 2196 gccagcgtgatgaactgcca 2177
>gb|AY038602.2| Coccidioides immitis isocitrate lyase mRNA, complete cds Length = 2196 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 gccagcgtgatgaactgcca 565 |||||||||||||||||||| Sbjct: 1707 gccagcgtgatgaactgcca 1688
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 |||||||| ||||||||||||||| Sbjct: 5183811 ccactccactcctcctctcctccc 5183788
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cctctcctcccgctggatcc 465 |||||||||||||||||||| Sbjct: 3588336 cctctcctcccgctggatcc 3588355
>gb|AC053503.7| Homo sapiens BAC clone RP11-316O14 from 2, complete sequence Length = 183625 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tccattcctcctctcctccc 456 |||||||||||||||||||| Sbjct: 43364 tccattcctcctctcctccc 43383
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 512 cgtgtcggtgacgagcgcgt 531 |||||||||||||||||||| Sbjct: 6826552 cgtgtcggtgacgagcgcgt 6826571
>dbj|AP006155.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1012G04 Length = 144644 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 |||||||| ||||||||||||||| Sbjct: 18751 ccactccactcctcctctcctccc 18728
>dbj|AP005504.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0577B11 Length = 180355 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cctctcctcccgctggatcc 465 |||||||||||||||||||| Sbjct: 66842 cctctcctcccgctggatcc 66861
>dbj|AP004635.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0672D01 Length = 146954 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 cctctcctcccgctggatcc 465 |||||||||||||||||||| Sbjct: 144053 cctctcctcccgctggatcc 144072
>emb|AL355773.4|CNS05TCO Human chromosome 14 DNA sequence BAC R-813I20 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 216647 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 acttttattatatccaattatctt 214 ||||||||||||||||||| |||| Sbjct: 105960 acttttattatatccaattttctt 105983
>gb|AC171062.5| Rhesus Macaque BAC CH250-364H15 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 164174 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 tccattcctcctctcctccc 456 |||||||||||||||||||| Sbjct: 9841 tccattcctcctctcctccc 9860
>gb|AC153853.4| Mus musculus BAC RP23-341J13 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 194037 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 433 ccactccattcctcctctcctccc 456 ||||||||| |||||||||||||| Sbjct: 30781 ccactccatccctcctctcctccc 30758
>gb|U39454.1|PTU39454 Pinus taeda isocitrate lyase (ICL 12) mRNA, complete cds Length = 2176 Score = 40.1 bits (20), Expect = 8.6 Identities = 47/56 (83%) Strand = Plus / Minus Query: 366 ccctgcacggtcttgagcaccctatcatagaagttggcacccgaccacttctggtg 421 |||||||| |||||||| | |||||||| | || ||||| |||||||||||||| Sbjct: 1660 ccctgcacagtcttgagaagagtatcatagtaattagcaccagaccacttctggtg 1605
>emb|AL772401.22| Mouse DNA sequence from clone RP23-49A12 on chromosome 4, complete sequence Length = 179155 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 tgatgtgacctgatggcact 193 |||||||||||||||||||| Sbjct: 6600 tgatgtgacctgatggcact 6619
>gb|U18765.1|CRU18765 Chlamydomonas reinhardtii isocitrate lyase mRNA, complete cds Length = 1950 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 536 gtggaacccggccagcgtgatgaa 559 |||||| ||||||||||||||||| Sbjct: 1103 gtggaagccggccagcgtgatgaa 1080 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,109,204 Number of Sequences: 3902068 Number of extensions: 5109204 Number of successful extensions: 105634 Number of sequences better than 10.0: 114 Number of HSP's better than 10.0 without gapping: 117 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 103912 Number of HSP's gapped (non-prelim): 1719 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
