Clone Name | rbasd13e16 |
---|---|
Clone Library Name | barley_pub |
>ref|NM_187507.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1623 Score = 313 bits (158), Expect = 3e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 1623 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 1564 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1563 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 1504 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1503 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 1444 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 1443 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 1384 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1383 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctggta 1324 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 ||||| ||| ||||||||||| |||| |||||||| ||| |||| ||||||||| ||| Sbjct: 1323 tgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttgggaggctcat 1264 Query: 555 tgccgc 560 ||||| Sbjct: 1263 cgccgc 1258
>dbj|AK099036.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013134F21, full insert sequence Length = 1993 Score = 313 bits (158), Expect = 3e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 1780 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 1721 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1720 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 1661 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1660 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 1601 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 1600 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 1541 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1540 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctggta 1481 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 ||||| ||| ||||||||||| |||| |||||||| ||| |||| ||||||||| ||| Sbjct: 1480 tgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttgggaggctcat 1421 Query: 555 tgccgc 560 ||||| Sbjct: 1420 cgccgc 1415
>dbj|AK067693.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116E16, full insert sequence Length = 1899 Score = 313 bits (158), Expect = 3e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 1683 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 1624 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1623 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 1564 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1563 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 1504 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 1503 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 1444 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1443 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctggta 1384 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 ||||| ||| ||||||||||| |||| |||||||| ||| |||| ||||||||| ||| Sbjct: 1383 tgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttgggaggctcat 1324 Query: 555 tgccgc 560 ||||| Sbjct: 1323 cgccgc 1318
>dbj|AK060821.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-B01, full insert sequence Length = 2080 Score = 313 bits (158), Expect = 3e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 1865 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 1806 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1805 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 1746 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1745 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 1686 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 1685 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 1626 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1625 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctggta 1566 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 ||||| ||| ||||||||||| |||| |||||||| ||| |||| ||||||||| ||| Sbjct: 1565 tgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttgggaggctcat 1506 Query: 555 tgccgc 560 ||||| Sbjct: 1505 cgccgc 1500
>dbj|AB095095.1| Oryza sativa (japonica cultivar-group) OsSig2B mRNA for plastid sigma factor 2B, complete cds Length = 1890 Score = 313 bits (158), Expect = 3e-82 Identities = 314/366 (85%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 1665 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 1606 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1605 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 1546 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 1545 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 1486 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 1485 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 1426 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | ||||||| ||||||||||||||||||||||| |||||| ||||||||||||||| Sbjct: 1425 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctggta 1366 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 ||||| ||| ||||||||||| |||| |||||||| ||| |||| ||||||||| ||| Sbjct: 1365 tgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttgggaggctcat 1306 Query: 555 tgccgc 560 ||||| Sbjct: 1305 cgccgc 1300
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 264 bits (133), Expect = 3e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 9040104 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 9040045 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9040044 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 9039985 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 9039984 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 9039925 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 9039924 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 9039865 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctg 491 | | ||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 9039864 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctg 9039808 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 cctggtatgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttggga 547 |||||||||||| ||| ||||||||||| |||| |||||||| ||| |||| |||||| Sbjct: 9039709 cctggtatgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttggga 9039650 Query: 548 ggcacattgccgc 560 ||| ||| ||||| Sbjct: 9039649 ggctcatcgccgc 9039637
>gb|AC135207.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1261C08, complete sequence Length = 99910 Score = 264 bits (133), Expect = 3e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 47140 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 47081 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 47080 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 47021 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 47020 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 46961 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 46960 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 46901 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctg 491 | | ||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 46900 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctg 46844 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 cctggtatgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttggga 547 |||||||||||| ||| ||||||||||| |||| |||||||| ||| |||| |||||| Sbjct: 46745 cctggtatgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttggga 46686 Query: 548 ggcacattgccgc 560 ||| ||| ||||| Sbjct: 46685 ggctcatcgccgc 46673
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 264 bits (133), Expect = 3e-67 Identities = 256/297 (86%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| | |||| ||| || ||||| |||||| ||||||||| ||| ||| Sbjct: 9037937 ctaccagctctccacaggctgcagataatgctgcagcgactgaaccttcttcctgcccct 9037878 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 |||||| ||||| ||| ||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 9037877 gagcttccggaacgcgaccagctcgatctgccggatcctctccctgctcacccccatcag 9037818 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 | | ||||||||||||||||||| | |||||||||||||||||||||||||||||| Sbjct: 9037817 ccgaccgatgtcgtgcagcgtccgcagccggccgtcgtccatcccgaacctgtacctgat 9037758 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| ||||||||| ||| |||| | |||||||||| |||||||||||| |||||| | Sbjct: 9037757 cacctgcctctcccgcgggctcagcccgtccagcgccctgtccacgtcttccttcatcag 9037698 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctg 491 | | ||||||| ||||||||||||||||||||||| |||||| |||||||||||| Sbjct: 9037697 ccaccggtgcagcatctcctccgccgtctccgtgctcgtgtccggcgtgatctcctg 9037641 Score = 58.0 bits (29), Expect = 3e-05 Identities = 62/73 (84%) Strand = Plus / Minus Query: 488 cctggtatgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttggga 547 |||||||||||| ||| ||||||||||| |||| |||||||| ||| |||| |||||| Sbjct: 9037542 cctggtatgtcatgtcagtgcacccgaccttgctggtgagggaaacggtgtattttggga 9037483 Query: 548 ggcacattgccgc 560 ||| ||| ||||| Sbjct: 9037482 ggctcatcgccgc 9037470
>gb|AF099111.1| Zea mays sigma factor SIG2B (sig2B) mRNA, complete cds; nuclear gene for chloroplast product Length = 1856 Score = 210 bits (106), Expect = 4e-51 Identities = 301/366 (82%) Strand = Plus / Minus Query: 195 ctaccagctctctgccggctccaggtagtgctgtagcgacgtcaccttcttcttgctcct 254 |||||||||||| |||||| |||||||||||| |||||| || | | |||||||||| Sbjct: 1607 ctaccagctctccgccggccgcaggtagtgctgcagcgactgcaacctgttcttgctccg 1548 Query: 255 gagcttgcggaaggcggccatctcgatctgccggatcctctccctgctcacccccatcag 314 ||||| ||||| ||| ||| ||||||||||||||||| ||||| ||| |||||||| || Sbjct: 1547 cagcttccggaacgcgcccagctcgatctgccggatccgctcccggctgacccccatgag 1488 Query: 315 ctgcccgatgtcgtgcagcgtcctcgctttgccgtcgtccatcccgaacctgtacctgat 374 |||||||||||||||||| ||||| || ||| | || || ||||||| ||||| || Sbjct: 1487 ctgcccgatgtcgtgcagggtcctggcccgcccgccctcgatgccgaaccggtaccgcat 1428 Query: 375 aacctccctctcccgaggggtcaggctgtccagcgccttgtccacgtctttcttcatgaa 434 |||| | ||| || ||| ||||||||||||||||| ||| |||||| |||||||| | Sbjct: 1427 cacctgcttcttgcgcgggctcaggctgtccagcgccgtgttcacgtccttcttcatcag 1368 Query: 435 cagtctgtgcagcgtctcctccgccgtctccgtgctcttgtccgccgtgatctcctggta 494 | | |||||||||||||||||||||||| | |||| |||||| | ||||||||||||| Sbjct: 1367 ccaccggtgcagcgtctcctccgccgtctcggcgctcgtgtccggcatgatctcctggta 1308 Query: 495 tgtcacgtccgtgcacccgactttgccagtgagggatacgctgtaccttgggaggcacat 554 || ||||||||||||||||| |||| |||| ||| |||||||| | ||||||| ||| Sbjct: 1307 cgtgacgtccgtgcacccgaccttgctcgtgaaggacacgctgtatttcgggaggctcat 1248 Query: 555 tgccgc 560 ||||| Sbjct: 1247 ggccgc 1242
>gb|AF099110.1| Zea mays sigma factor SIG2A (sig2A) mRNA, complete cds; nuclear gene for chloroplast product Length = 1938 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||||||||||||||||| || || ||||| ||| | ||||||||||||||| |||| Sbjct: 1706 tcaccttcttcttgctccttagtttccggaacgcgccagactcgatctgccggattctct 1647 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 1646 ccctgctcacgcccat 1631
>gb|AY110573.1| Zea mays CL1596_1 mRNA sequence Length = 1900 Score = 71.9 bits (36), Expect = 2e-09 Identities = 66/76 (86%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||||||||||||||||| || || ||||| ||| | ||||||||||||||| |||| Sbjct: 1706 tcaccttcttcttgctccttagtttccggaacgcgccagactcgatctgccggattctct 1647 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 1646 ccctgctcacgcccat 1631
>gb|AC147925.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032N11 map near 50283S, complete sequence Length = 139217 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 16405 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 16346 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 16345 ccctgctcacacccat 16330
>gb|AC146522.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0039A07 map near 50283S, complete sequence Length = 158158 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 147183 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 147124 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 147123 ccctgctcacacccat 147108
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 14401571 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 14401512 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 14401511 ccctgctcacacccat 14401496
>dbj|AK066099.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013054G24, full insert sequence Length = 2049 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 1805 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 1746 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 1745 ccctgctcacacccat 1730
>dbj|AK058650.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-018-F01, full insert sequence Length = 1434 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 1231 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 1172 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 1171 ccctgctcacacccat 1156
>dbj|AB095094.1| Oryza sativa (japonica cultivar-group) OsSig2A mRNA for plastid sigma factor 2A, complete cds Length = 1920 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 1692 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 1633 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 1632 ccctgctcacacccat 1617
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 56.0 bits (28), Expect = 1e-04 Identities = 64/76 (84%) Strand = Plus / Minus Query: 236 tcaccttcttcttgctcctgagcttgcggaaggcggccatctcgatctgccggatcctct 295 ||||| ||||||||||||| || || || || ||||| ||| || ||||||||||||| Sbjct: 14483572 tcaccctcttcttgctcctcagtttccgaaatgcggctgactctatttgccggatcctct 14483513 Query: 296 ccctgctcacccccat 311 |||||||||| ||||| Sbjct: 14483512 ccctgctcacacccat 14483497
>gb|AE000657.1| Aquifex aeolicus VF5, complete genome Length = 1551335 Score = 44.1 bits (22), Expect = 0.49 Identities = 25/26 (96%) Strand = Plus / Plus Query: 408 cgccttgtccacgtctttcttcatga 433 |||||| ||||||||||||||||||| Sbjct: 1209655 cgccttttccacgtctttcttcatga 1209680
>ref|XM_958781.1| Neurospora crassa OR74A hypothetical protein (NCU08115.1) partial mRNA Length = 3438 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 aaggcggccatctcgatctgccgga 289 ||||||||| ||||||||||||||| Sbjct: 854 aaggcggccgtctcgatctgccgga 830
>ref|XM_328820.1| Neurospora crassa OR74A hypothetical protein (NCU08115.1) partial mRNA Length = 3438 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 265 aaggcggccatctcgatctgccgga 289 ||||||||| ||||||||||||||| Sbjct: 854 aaggcggccgtctcgatctgccgga 830
>gb|AY113582.1| Drosophila melanogaster RH33063 full insert cDNA Length = 1364 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 871 ctccgccgtctccttgctcttgtcc 847
>ref|NM_057377.3| Drosophila melanogaster seven in absentia CG9949-RA, transcript variant A (sina), mRNA Length = 4435 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 260 ctccgccgtctccttgctcttgtcc 284
>ref|NM_057353.3| Drosophila melanogaster Rhodopsin 4 CG9668-RA (Rh4), mRNA Length = 1862 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 1379 ctccgccgtctccttgctcttgtcc 1355
>gb|AC010751.5| Drosophila melanogaster 3L BAC RP98-9A23 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 181437 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 64641 ctccgccgtctccttgctcttgtcc 64617
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tgtagcgacgtcaccttcttcttgc 250 |||||| |||||||||||||||||| Sbjct: 22192536 tgtagccacgtcaccttcttcttgc 22192560
>dbj|AP003432.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1112D09 Length = 125920 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 226 tgtagcgacgtcaccttcttcttgc 250 |||||| |||||||||||||||||| Sbjct: 88022 tgtagccacgtcaccttcttcttgc 88046
>gb|AC006933.3|AC006933 Drosophila melanogaster, chromosome 3L, region 73B7-73D6, BAC clone BACR48E21, complete sequence Length = 186002 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 47133 ctccgccgtctccttgctcttgtcc 47109
>gb|AE003526.4| Drosophila melanogaster chromosome 3L, section 59 of 83 of the complete sequence Length = 281100 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 268961 ctccgccgtctccttgctcttgtcc 268985
>gb|M38384.1|DROSINA Drosophila melanogaster seven in absentia mRNA, complete cds Length = 4440 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Plus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 260 ctccgccgtctccttgctcttgtcc 284
>gb|M17730.1|DRORH4A2 D.melanogaster opsin Rh4 gene, exon 2 Length = 729 Score = 42.1 bits (21), Expect = 1.9 Identities = 24/25 (96%) Strand = Plus / Minus Query: 453 ctccgccgtctccgtgctcttgtcc 477 ||||||||||||| ||||||||||| Sbjct: 246 ctccgccgtctccttgctcttgtcc 222
>ref|NM_105937.3| Arabidopsis thaliana unknown protein AT1G72790 mRNA, complete cds Length = 2053 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 889 cgtctcctccgccgtctccg 908
>ref|NM_129566.2| Arabidopsis thaliana ELF4 (EARLY FLOWERING 4) AT2G40080 (ELF4) mRNA, complete cds Length = 619 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 103 gccggatcctctccctgctc 84
>ref|XM_483186.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1951 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 gagcttgcggaaggcggccatctc 278 ||||||||||||||||||| |||| Sbjct: 333 gagcttgcggaaggcggccttctc 310
>ref|XM_364974.1| Magnaporthe grisea 70-15 hypothetical protein (MG09819.4) partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 307 cccatcagctgcccgatgtc 326 |||||||||||||||||||| Sbjct: 377 cccatcagctgcccgatgtc 396
>gb|AC003964.1|HUAC003964 Homo sapiens Chromosome 16 BAC clone CIT987SK-A-911E12, complete sequence Length = 117435 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cctgctcacccccatcagct 316 |||||||||||||||||||| Sbjct: 106183 cctgctcacccccatcagct 106202
>gb|BT000901.1| Arabidopsis thaliana clone C105062 unknown protein (At1g72790) mRNA, complete cds Length = 1717 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 788 cgtctcctccgccgtctccg 807
>gb|AY091038.1| Arabidopsis thaliana unknown protein (At1g72790) mRNA, partial cds Length = 1707 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 889 cgtctcctccgccgtctccg 908
>gb|AY062963.1| Arabidopsis thaliana unknown protein (At2g40080) mRNA, complete cds Length = 367 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 71 gccggatcctctccctgctc 52
>gb|AY035183.1| Arabidopsis thaliana unknown protein (At2g40080) mRNA, complete cds Length = 586 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 74 gccggatcctctccctgctc 55
>emb|BX901923.6| Zebrafish DNA sequence from clone CH211-285J16 in linkage group 15, complete sequence Length = 151595 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 437 gtctgtgcagcgtctcctcc 456 |||||||||||||||||||| Sbjct: 5258 gtctgtgcagcgtctcctcc 5239
>gb|AC107302.4| Homo sapiens 3 BAC RP11-564P9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 194234 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 242 tcttcttgctcctgagcttgcggaaggc 269 ||||||||||||| ||||||| |||||| Sbjct: 76012 tcttcttgctcctcagcttgcagaaggc 75985
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 506 tgcacccgactttgccagtg 525 |||||||||||||||||||| Sbjct: 95577 tgcacccgactttgccagtg 95596
>gb|AF002109.3| Arabidopsis thaliana chromosome 2 clone T28M21 map CIC10A06, complete sequence Length = 108847 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 103471 gccggatcctctccctgctc 103490
>gb|AF099112.1| Zea mays sigma factor SIG6 (sig6) mRNA, complete cds; nuclear gene for chloroplast product Length = 1823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 481 gtgatctcctggtatgtcac 500 |||||||||||||||||||| Sbjct: 1401 gtgatctcctggtatgtcac 1382
>gb|AY081724.1| Arabidopsis thaliana At1g72790/F28P22_2 mRNA, complete cds Length = 1686 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 788 cgtctcctccgccgtctccg 807
>gb|AC093264.2| Homo sapiens chromosome 5 clone RP11-263G2, complete sequence Length = 164217 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 237 caccttcttcttgctcctga 256 |||||||||||||||||||| Sbjct: 91275 caccttcttcttgctcctga 91294
>gb|AC099049.2| Homo sapiens chromosome 3 clone RP11-291P10, complete sequence Length = 180339 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 242 tcttcttgctcctgagcttgcggaaggc 269 ||||||||||||| ||||||| |||||| Sbjct: 15299 tcttcttgctcctcagcttgcagaaggc 15326
>gb|AY070717.1| Arabidopsis thaliana At1g72790/F28P22_2 mRNA, complete cds Length = 2010 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 845 cgtctcctccgccgtctccg 864
>gb|AC099495.2| Homo sapiens chromosome 16 clone RP11-1145B23, complete sequence Length = 161750 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cctgctcacccccatcagct 316 |||||||||||||||||||| Sbjct: 121697 cctgctcacccccatcagct 121716
>gb|AC090763.7| Homo sapiens chromosome 15, clone RP11-408F10, complete sequence Length = 149304 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 gtttagttcatttacacaat 47 |||||||||||||||||||| Sbjct: 34565 gtttagttcatttacacaat 34584
>emb|BX571827.10| Zebrafish DNA sequence from clone CH211-195M20 in linkage group 19, complete sequence Length = 114534 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 125 ccagcagcagcaagcaaagg 144 |||||||||||||||||||| Sbjct: 62690 ccagcagcagcaagcaaagg 62709
>gb|AC010926.12|AC010926 Arabidopsis thaliana chromosome 1 BAC F28P22 genomic sequence, complete sequence Length = 101105 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 14882 cgtctcctccgccgtctccg 14863
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 agcagcaagcaaaggccgtg 149 |||||||||||||||||||| Sbjct: 21055286 agcagcaagcaaaggccgtg 21055305
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gagcttgcggaaggcggccatctc 278 ||||||||||||||||||| |||| Sbjct: 24691325 gagcttgcggaaggcggccttctc 24691348
>emb|BX816492.1|CNS0ABPQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH51ZD08 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1872 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 447 cgtctcctccgccgtctccg 466 |||||||||||||||||||| Sbjct: 821 cgtctcctccgccgtctccg 840
>emb|BX821352.1|CNS0A9AV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL35ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 92 gccggatcctctccctgctc 73
>emb|BX821090.1|CNS0A94U Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL14ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 593 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 79 gccggatcctctccctgctc 60
>emb|BX649631.8| Zebrafish DNA sequence from clone CH211-186M12 in linkage group 22, complete sequence Length = 168355 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 cattagcttgtaaacaaaaa 26 |||||||||||||||||||| Sbjct: 142498 cattagcttgtaaacaaaaa 142479
>gb|AC157678.2| Xenopus tropicalis clone ISB1-130B13, complete sequence Length = 143383 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 190 tatgtctaccagctctctgc 209 |||||||||||||||||||| Sbjct: 64777 tatgtctaccagctctctgc 64796
>gb|AC104698.2| Homo sapiens BAC clone RP11-517F1 from 2, complete sequence Length = 115170 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 240 cttcttcttgctcctgagct 259 |||||||||||||||||||| Sbjct: 58703 cttcttcttgctcctgagct 58684
>gb|AC016776.6| Homo sapiens BAC clone RP11-574K22 from 2, complete sequence Length = 197425 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 agctctctgccggctccagg 219 |||||||||||||||||||| Sbjct: 86716 agctctctgccggctccagg 86735
>gb|AC102941.9| Homo sapiens chromosome 15, clone RP11-300A12, complete sequence Length = 174941 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 gtttagttcatttacacaat 47 |||||||||||||||||||| Sbjct: 5728 gtttagttcatttacacaat 5709
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 312 cagctgcccgatgtcgtgca 331 |||||||||||||||||||| Sbjct: 8656717 cagctgcccgatgtcgtgca 8656736
>gb|AC137788.3| Homo sapiens chromosome 16 clone RP11-207M10, complete sequence Length = 158420 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 297 cctgctcacccccatcagct 316 |||||||||||||||||||| Sbjct: 15743 cctgctcacccccatcagct 15762
>gb|AY088748.1| Arabidopsis thaliana clone 9398 mRNA, complete sequence Length = 617 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gccggatcctctccctgctc 303 |||||||||||||||||||| Sbjct: 104 gccggatcctctccctgctc 85
>gb|AC102448.15| Mus musculus chromosome 3, clone RP24-209L5, complete sequence Length = 159371 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 29 tttagttcatttacacaatg 48 |||||||||||||||||||| Sbjct: 120601 tttagttcatttacacaatg 120582
>gb|AC096549.1| Homo sapiens BAC clone RP11-5K15 from 2, complete sequence Length = 37239 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 368 acctgataacctccctctcc 387 |||||||||||||||||||| Sbjct: 12548 acctgataacctccctctcc 12529
>dbj|AP003873.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A06 Length = 92836 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Plus Query: 255 gagcttgcggaaggcggccatctc 278 ||||||||||||||||||| |||| Sbjct: 63629 gagcttgcggaaggcggccttctc 63652
>gb|AC153859.6| Mus musculus 10 BAC RP23-135F12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 222182 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tttagttcatttacacaatg 48 |||||||||||||||||||| Sbjct: 190432 tttagttcatttacacaatg 190451
>dbj|AK064018.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-H11, full insert sequence Length = 1951 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 gagcttgcggaaggcggccatctc 278 ||||||||||||||||||| |||| Sbjct: 333 gagcttgcggaaggcggccttctc 310
>dbj|AK059046.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-021-D09, full insert sequence Length = 685 Score = 40.1 bits (20), Expect = 7.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 255 gagcttgcggaaggcggccatctc 278 ||||||||||||||||||| |||| Sbjct: 333 gagcttgcggaaggcggccttctc 310
>emb|AL731590.4|OSJN00233 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0035I04, complete sequence Length = 140890 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 agcagcaagcaaaggccgtg 149 |||||||||||||||||||| Sbjct: 101139 agcagcaagcaaaggccgtg 101158 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,669,971 Number of Sequences: 3902068 Number of extensions: 4669971 Number of successful extensions: 91298 Number of sequences better than 10.0: 73 Number of HSP's better than 10.0 without gapping: 73 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 90868 Number of HSP's gapped (non-prelim): 414 length of query: 560 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 537 effective length of database: 17,143,297,704 effective search space: 9205950867048 effective search space used: 9205950867048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)