>gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosome 15, complete sequence
          Length = 213726

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 121    aggaagagagactcaggaaact 142
              ||||||||||||||||||||||
Sbjct: 138284 aggaagagagactcaggaaact 138305

>emb|AL390719.47| Human DNA sequence from clone RP11-465B22 on chromosome 1 Contains a
              novel gene, a novel gene, a protein tyrosine phosphatase
              family pseudogene, a novel gene (FLJ20584), a novel gene, a
              novel gene, a novel gene (FLJ36119) and five CpG islands,
              complete sequence
          Length = 130979

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 71     ccggctcttttgtattctctg 91
              |||||||||||||||||||||
Sbjct: 115952 ccggctcttttgtattctctg 115972

>dbj|AK125828.1| Homo sapiens cDNA FLJ43840 fis, clone TESTI4006112
          Length = 4156

 Score = 42.1 bits (21), Expect = 0.95
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 71  ccggctcttttgtattctctg 91
           |||||||||||||||||||||
Sbjct: 351 ccggctcttttgtattctctg 331

>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete
             sequence
          Length = 166313

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 119   tgaggaagagagactcagga 138
             ||||||||||||||||||||
Sbjct: 35718 tgaggaagagagactcagga 35737

>ref|XM_469979.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1596

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 77  cttttgtattctctgaaaca 96
           ||||||||||||||||||||
Sbjct: 884 cttttgtattctctgaaaca 903

>gb|AC120553.9| Mus musculus chromosome 15, clone RP24-338L24, complete sequence
          Length = 152510

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 28    cacaaatgcaagaaaacaaa 47
             ||||||||||||||||||||
Sbjct: 83888 cacaaatgcaagaaaacaaa 83869

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       cttttgtattctctgaaaca 96
                ||||||||||||||||||||
Sbjct: 33163271 cttttgtattctctgaaaca 33163290

>ref|XM_760485.1| Theileria parva strain Muguga chromosome 1 hypothetical protein
            (TP01_0051) partial mRNA
          Length = 1884

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 37   aagaaaacaaacgcatggct 56
            ||||||||||||||||||||
Sbjct: 1774 aagaaaacaaacgcatggct 1793

>emb|BX511018.18| Zebrafish DNA sequence from clone DKEY-241H1 in linkage group 4
             Contains eight novel genes and three CpG islands, complete
             sequence
          Length = 95944

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cacaaatgcaagaaaacaaa 47
             ||||||||||||||||||||
Sbjct: 43516 cacaaatgcaagaaaacaaa 43535

>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11, complete
              sequence
          Length = 252675

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 28     cacaaatgcaagaaaacaaa 47
              ||||||||||||||||||||
Sbjct: 173775 cacaaatgcaagaaaacaaa 173794

>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence
          Length = 79475

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 116   tgatgaggaagagagactca 135
             ||||||||||||||||||||
Sbjct: 59010 tgatgaggaagagagactca 58991

>gb|AE010227.1| Pyrococcus furiosus DSM 3638, section 102 of 173 of the complete
            genome
          Length = 10042

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 79   tttgtattctctgaaacacc 98
            ||||||||||||||||||||
Sbjct: 9998 tttgtattctctgaaacacc 9979

>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence
          Length = 177867

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    cacaaatgcaagaaaacaaa 47
             ||||||||||||||||||||
Sbjct: 11450 cacaaatgcaagaaaacaaa 11469

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 77       cttttgtattctctgaaaca 96
                ||||||||||||||||||||
Sbjct: 33253781 cttttgtattctctgaaaca 33253800

>gb|AC007839.4|AC007839 Drosophila melanogaster, chromosome 2R, region 56B1-56C4, BAC clone
              BACR01N09, complete sequence
          Length = 161172

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    ctaattcgagctctttttct 245
              ||||||||||||||||||||
Sbjct: 122763 ctaattcgagctctttttct 122782

>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete
             sequence
          Length = 144487

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 77    cttttgtattctctgaaaca 96
             ||||||||||||||||||||
Sbjct: 81284 cttttgtattctctgaaaca 81265

>gb|AC084658.1|CBRG46L07 Caenorhabditis briggsae cosmid G46L07, complete sequence
          Length = 35227

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 112   accatgatgaggaagagaga 131
             ||||||||||||||||||||
Sbjct: 19805 accatgatgaggaagagaga 19824

>gb|AC135251.2| Homo sapiens 12 BAC RP11-167E10 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 70387

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 87    ctctgaaacacccaacacttgctt 110
             ||||||||||| ||||||||||||
Sbjct: 39184 ctctgaaacactcaacacttgctt 39207

>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete
              sequence
          Length = 306854

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 226    ctaattcgagctctttttct 245
              ||||||||||||||||||||
Sbjct: 305599 ctaattcgagctctttttct 305618


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,675,678
Number of Sequences: 3902068
Number of extensions: 2675678
Number of successful extensions: 49767
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 49720
Number of HSP's gapped (non-prelim): 47
length of query: 287
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 265
effective length of database: 17,147,199,772
effective search space: 4544007939580
effective search space used: 4544007939580
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)