>SVS1_YEAST (Q12254) Protein SVS1 precursor|
          Length = 260

 Score = 28.9 bits (63), Expect = 3.2
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +2

Query: 98  LTLTLISYFYTSDRQQEYCTHSTAADHRLNVHSSRLTVLLEQQLQMTETT 247
           LT TL+   Y S       T STA D   NV +    V  E Q QM +TT
Sbjct: 157 LTSTLLVTVYNSQASNTIAT-STAGDAASNVDALEKLVSAEHQSQMIQTT 205

>MIRC_EMENI (Q870L3) Siderophore iron transporter mirC (Major facilitator|
           iron-regulated transporter C)
          Length = 607

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDRQQEYCTHSTAA 172
           I      T+N L  + +L  LP++ L+L+   Y  D+  E   H  A+
Sbjct: 546 INRSYQETMNKLLVLALLATLPLIPLSLLMSNYKLDKMSESSDHDDAS 593

>Y2208_ECO57 (Q8XAX0) Protein Z2208/ECs2105|
          Length = 65

 Score = 28.1 bits (61), Expect = 5.5
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKEIMSVIVVILLLTLTLIAIFSAIDQ 42

>TRM1_YEAST (P15565) N(2),N(2)-dimethylguanosine tRNA methyltransferase,|
           mitochondrial precursor (EC 2.1.1.32)
           (tRNA(guanine-26,N(2)-N(2)) methyltransferase) (tRNA
           2,2-dimethylguanosine-26 methyltransferase)
           (tRNA(m(2,2)G26)dimethyltransferase)
          Length = 570

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/63 (20%), Positives = 32/63 (50%)
 Frame = -2

Query: 352 DDFNLKEQWQAQVLLILQQGMTSNPCPGMDANSRLSCFRHLKLLLKENCQTR*MNIQAMV 173
           +DFN+ ++ +A++L   ++ +  NP    + +  ++C +    L  E C  +  N ++  
Sbjct: 40  EDFNIVKEGKAEILFPKKETVFYNPIQQFNRDLSVTCIKAWDNLYGEECGQKRNNKKSKK 99

Query: 172 RSC 164
           + C
Sbjct: 100 KRC 102

>Y1929_ECOL6 (Q8FHF9) Protein c_1929|
          Length = 65

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQ 42

>Y1623_SHISS (Q3Z1P4) Protein SSO_1623|
          Length = 65

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQ 42

>Y1556_SHIBS (Q320T9) Protein SBO_1556|
          Length = 65

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQ 42

>Y1537_SHIFL (Q7UCH6) Protein SF1537.1/S1655|
          Length = 67

 Score = 27.7 bits (60), Expect = 7.1
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKEIMSVIVVVLLLTLTLIAIFSAIDQ 42

>Y1659_SHIDS (Q32FX5) Protein SDY_1659|
          Length = 65

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 13/37 (35%), Positives = 23/37 (62%)
 Frame = +2

Query: 29  IKXQITNTLNFLYTIKVLYILPMLTLTLISYFYTSDR 139
           +K +IT   N+   + V+ ++ +LTLTLI+ F   D+
Sbjct: 6   VKNKITQRDNYKGIMSVIVVVLLLTLTLIAIFSAIDQ 42

>RNC_RHILO (Q985A6) Ribonuclease III (EC 3.1.26.3) (RNase III)|
          Length = 221

 Score = 27.3 bits (59), Expect = 9.3
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = -1

Query: 350 RLQPERTMASTSAANSPTGYDF*PLPRN---GCKLAVKLFPSFEAAAQGELSDEMN 192
           RLQ   T AS   AN+ T Y+      +   G  +A  L  +F  AA+GELS  +N
Sbjct: 13  RLQRALTHASARGANAGTDYERFEFLGDRVLGLVVADMLLAAFPDAAEGELSLRLN 68


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,339,747
Number of Sequences: 219361
Number of extensions: 821235
Number of successful extensions: 1907
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1881
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1907
length of database: 80,573,946
effective HSP length: 98
effective length of database: 59,076,568
effective search space used: 1417837632
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)