ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13e02 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AY110158.1| Zea mays CL11825_1 mRNA sequence Length = 692 Score = 69.9 bits (35), Expect = 1e-08 Identities = 56/63 (88%) Strand = Plus / Plus Query: 608 atcttctctgaagcagctgattcctttgcctgcaagtcctcattctcctcttgtatgttc 667 |||||||| |||||||| ||| |||||||||||| ||| |||||||||| || ||||||| Sbjct: 619 atcttctcagaagcagccgatacctttgcctgcaggtcgtcattctcctgttttatgttc 678 Query: 668 tgc 670 ||| Sbjct: 679 tgc 681 Score = 46.1 bits (23), Expect = 0.15 Identities = 68/83 (81%) Strand = Plus / Plus Query: 440 tcgttctccttctccttggacgaatcgtagtctgtgaccttgctgttctcccacatcttg 499 ||||||||||| |||| || ||||||||||| | | |||||||||||||| | ||| Sbjct: 439 tcgttctccttaaccttagatgaatcgtagtcagcaaagttgctgttctcccatactttg 498 Query: 500 gcgaccaccacaactggttcgtc 522 || || |||||||| |||||||| Sbjct: 499 gcaactaccacaacaggttcgtc 521
>emb|AL662952.6|OSJN00151 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0009P12, complete sequence Length = 179644 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 595 ggagagcttctttatcttctctgaagcagctgattcctttgcctgcaagtcctcattctc 654 |||||||| |||||||||||| |||||| | ||||||||| ||||| || || ||||| Sbjct: 77449 ggagagctcctttatcttctcagaagcaacaagttcctttgcttgcaaatcatcgttctc 77390 Query: 655 ctcttgtatgttctgcaattcgttctctttgtcta 689 | || |||||||||||| || || |||||||||| Sbjct: 77389 ttgttttatgttctgcaactcattttctttgtcta 77355 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 476 accttgctgttctcccacatctt 498 ||||||||||||||||||||||| Sbjct: 77574 accttgctgttctcccacatctt 77552
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 595 ggagagcttctttatcttctctgaagcagctgattcctttgcctgcaagtcctcattctc 654 |||||||| |||||||||||| |||||| | ||||||||| ||||| || || ||||| Sbjct: 29940697 ggagagctcctttatcttctcagaagcaacaagttcctttgcttgcaaatcatcgttctc 29940638 Query: 655 ctcttgtatgttctgcaattcgttctctttgtcta 689 | || |||||||||||| || || |||||||||| Sbjct: 29940637 ttgttttatgttctgcaactcattttctttgtcta 29940603 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 476 accttgctgttctcccacatctt 498 ||||||||||||||||||||||| Sbjct: 29940822 accttgctgttctcccacatctt 29940800 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctg 333 |||||| ||||||||||||||||| Sbjct: 24277668 tttctttttcttttgctgctgctg 24277645 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ttcttcttttgctgctgctg 333 |||||||||||||||||||| Sbjct: 11129492 ttcttcttttgctgctgctg 11129511
>dbj|AK073937.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075G21, full insert sequence Length = 2570 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 595 ggagagcttctttatcttctctgaagcagctgattcctttgcctgcaagtcctcattctc 654 |||||||| |||||||||||| |||||| | ||||||||| ||||| || || ||||| Sbjct: 2089 ggagagctcctttatcttctcagaagcaacaagttcctttgcttgcaaatcatcgttctc 2030 Query: 655 ctcttgtatgttctgcaattcgttctctttgtcta 689 | || |||||||||||| || || |||||||||| Sbjct: 2029 ttgttttatgttctgcaactcattttctttgtcta 1995 Score = 40.1 bits (20), Expect = 9.5 Identities = 44/52 (84%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgctgtttggttggcgatgcgatgccgttgttcgcc 364 ||||||||||||| ||||||| |||| || |||||| |||| ||| ||||| Sbjct: 2377 cttcttcttttgcggctgctgcttgggcggtgatgcgttgccattgctcgcc 2326 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 479 ttgctgttctcccacatctt 498 |||||||||||||||||||| Sbjct: 2211 ttgctgttctcccacatctt 2192
>dbj|AK059702.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-D01, full insert sequence Length = 1547 Score = 61.9 bits (31), Expect = 3e-06 Identities = 79/95 (83%) Strand = Plus / Minus Query: 595 ggagagcttctttatcttctctgaagcagctgattcctttgcctgcaagtcctcattctc 654 |||||||| |||||||||||| |||||| | ||||||||| ||||| || || ||||| Sbjct: 913 ggagagctcctttatcttctcagaagcaacaagttcctttgcttgcaaatcatcgttctc 854 Query: 655 ctcttgtatgttctgcaattcgttctctttgtcta 689 | || |||||||||||| || || |||||||||| Sbjct: 853 ttgttttatgttctgcaactcattttctttgtcta 819 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 476 accttgctgttctcccacatctt 498 ||||||||||||||||||||||| Sbjct: 1038 accttgctgttctcccacatctt 1016
>ref|NM_001016186.2| Xenopus tropicalis hypothetical protein LOC548940 (LOC548940), mRNA Length = 929 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctgtttg 337 |||||||||||||||||||||||||||| Sbjct: 765 tttcttcttcttttgctgctgctgtttg 738
>emb|CR761821.2| Xenopus tropicalis finished cDNA, clone TGas045b14 Length = 929 Score = 56.0 bits (28), Expect = 2e-04 Identities = 28/28 (100%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctgtttg 337 |||||||||||||||||||||||||||| Sbjct: 765 tttcttcttcttttgctgctgctgtttg 738
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 ttcttcttcttttgctgctgctg 333 ||||||||||||||||||||||| Sbjct: 17148940 ttcttcttcttttgctgctgctg 17148962 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 8596612 ttcttcttcttctgctgctgctgtt 8596588 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cttttgtattctctgaaaca 138 |||||||||||||||||||| Sbjct: 33163271 cttttgtattctctgaaaca 33163290
>ref|XM_387202.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07026.1) partial mRNA Length = 204 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgctgtt 335 ||||||||||||||||||||||| Sbjct: 198 cttcttcttttgctgctgctgtt 176
>ref|XM_815553.1| Trypanosoma cruzi strain CL Brener mucin-associated surface protein (MASP) (Tc00.1047053506599.330) partial mRNA Length = 1281 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgctgtt 335 ||||||||||||||||||||||| Sbjct: 880 cttcttcttttgctgctgctgtt 858
>gb|AC137992.2| Oryza sativa chromosome 3 BAC OSJNBb0056B16 genomic sequence, complete sequence Length = 153247 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 ttcttcttcttttgctgctgctg 333 ||||||||||||||||||||||| Sbjct: 40333 ttcttcttcttttgctgctgctg 40355
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Plus Query: 311 ttcttcttcttttgctgctgctg 333 ||||||||||||||||||||||| Sbjct: 17142509 ttcttcttcttttgctgctgctg 17142531 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 8594447 ttcttcttcttctgctgctgctgtt 8594423 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cttttgtattctctgaaaca 138 |||||||||||||||||||| Sbjct: 33253781 cttttgtattctctgaaaca 33253800
>emb|CT573074.1| Kuenenia stuttgartiensis genome fragment KUST_B (2 of 5) Length = 132284 Score = 46.1 bits (23), Expect = 0.15 Identities = 23/23 (100%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctg 333 ||||||||||||||||||||||| Sbjct: 112169 ttcttcttcttttgctgctgctg 112147
>gb|AY591612.1| Mus musculus clone IgK19-13 immunoglobulin kappa-like gene, partial sequence Length = 3001 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ttcttcttttgctgctgctgtt 335 |||||||||||||||||||||| Sbjct: 218 ttcttcttttgctgctgctgtt 239
>gb|AC118681.6| Mus musculus chromosome 16, clone RP23-473M11, complete sequence Length = 279112 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctg 333 |||||||||||||||||||||| Sbjct: 212526 tcttcttcttttgctgctgctg 212547
>gb|AC153928.5| Mus musculus 6 BAC RP23-66O20 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 241211 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 314 ttcttcttttgctgctgctgtt 335 |||||||||||||||||||||| Sbjct: 220192 ttcttcttttgctgctgctgtt 220213
>gb|AE003849.1| Xylella fastidiosa 9a5c, complete genome Length = 2679306 Score = 44.1 bits (22), Expect = 0.61 Identities = 25/26 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgttt 336 ||||||||||| |||||||||||||| Sbjct: 1785986 ttcttcttcttctgctgctgctgttt 1785961
>gb|AC156284.8| Mus musculus 6 BAC RP24-392D13 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 182146 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ttcttcttttgctgctgctgtt 335 |||||||||||||||||||||| Sbjct: 106965 ttcttcttttgctgctgctgtt 106944
>gb|AC153855.4| Mus musculus 6 BAC RP23-175B24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183070 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 ttcttcttttgctgctgctgtt 335 |||||||||||||||||||||| Sbjct: 96213 ttcttcttttgctgctgctgtt 96192
>gb|AC110821.5| Mus musculus BAC clone RP23-418H19 from chromosome 15, complete sequence Length = 213726 Score = 44.1 bits (22), Expect = 0.61 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 aggaagagagactcaggaaact 184 |||||||||||||||||||||| Sbjct: 138284 aggaagagagactcaggaaact 138305
>gb|AC116501.7| Mus musculus chromosome 5, clone RP24-300D7, complete sequence Length = 174365 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 322 ttgctgctgctgtttggttgg 342 ||||||||||||||||||||| Sbjct: 53221 ttgctgctgctgtttggttgg 53241
>gb|AC140921.2| Mus musculus BAC clone RP24-472I23 from chromosome 5, complete sequence Length = 181004 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 322 ttgctgctgctgtttggttgg 342 ||||||||||||||||||||| Sbjct: 45294 ttgctgctgctgtttggttgg 45274
>gb|AC117547.19| Mus musculus chromosome 1, clone RP23-221M20, complete sequence Length = 195598 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 263 ttgtgctaatttgagctcttt 283 ||||||||||||||||||||| Sbjct: 139970 ttgtgctaatttgagctcttt 139950
>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence Length = 6365727 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 320 ttttgctgctgctgtttggtt 340 ||||||||||||||||||||| Sbjct: 411623 ttttgctgctgctgtttggtt 411603
>gb|AC113483.7| Mus musculus chromosome 1, clone RP23-343E12, complete sequence Length = 207188 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 608 atcttctctgaagcagctgat 628 ||||||||||||||||||||| Sbjct: 160112 atcttctctgaagcagctgat 160092
>ref|XM_809956.1| Trypanosoma cruzi strain CL Brener phosphatidylinositol-4-phosphate 5-kinase-like (Tc00.1047053506957.140) partial mRNA Length = 3042 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 1584 ttcttcttcttctgctgctgctgtt 1608
>ref|XM_814533.1| Trypanosoma cruzi strain CL Brener phosphatidylinositol-4-phosphate 5-kinase-like (Tc00.1047053511001.70) partial mRNA Length = 3045 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 1587 ttcttcttcttctgctgctgctgtt 1611
>emb|BX957325.16| Zebrafish DNA sequence from clone CH211-117O2 in linkage group 7, complete sequence Length = 166088 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 tcaacttacacaaatgcaaga 82 ||||||||||||||||||||| Sbjct: 135453 tcaacttacacaaatgcaaga 135473
>emb|AL512635.8| Human DNA sequence from clone RP11-15P13 on chromosome 9 Contains a survival of motor neuron 1, telomeric (SMN1) pseudogene and the 3' end of the MLLT3 gene for myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3 (AF9), complete sequence Length = 178631 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 308 aatttcttcttcttttgctgctgct 332 |||||||||||||| |||||||||| Sbjct: 21260 aatttcttcttcttctgctgctgct 21236
>emb|AL390719.47| Human DNA sequence from clone RP11-465B22 on chromosome 1 Contains a novel gene, a novel gene, a protein tyrosine phosphatase family pseudogene, a novel gene (FLJ20584), a novel gene, a novel gene, a novel gene (FLJ36119) and five CpG islands, complete sequence Length = 130979 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 113 ccggctcttttgtattctctg 133 ||||||||||||||||||||| Sbjct: 115952 ccggctcttttgtattctctg 115972
>emb|AL359983.7| Human DNA sequence from clone RP11-139L21 on chromosome 1 Contains part of a novel gene (FLJ10157), complete sequence Length = 166254 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ctaaacttaaatttcttcttctttt 323 ||||||||| ||||||||||||||| Sbjct: 158480 ctaaacttacatttcttcttctttt 158456
>emb|AL158035.14| Human DNA sequence from clone RP1-97J1 on chromosome 6 Contains the 5' end of the FYN gene for the FYN oncogene related to SRC, FGR, YES and a CpG island, complete sequence Length = 218548 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 592 agaggagagcttctttatctt 612 ||||||||||||||||||||| Sbjct: 189779 agaggagagcttctttatctt 189799
>gb|AC130388.6| Drosophila melanogaster X BAC CH221-14P20 (Children's Hospital Oakland Research Institute Drosophila melanogaster sheared DNA BAC Library) complete sequence Length = 117795 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgc 331 ||||||||||||||||||||| Sbjct: 36743 ttcttcttcttttgctgctgc 36723
>emb|CR381635.11| Zebrafish DNA sequence from clone DKEY-171C9 in linkage group 7, complete sequence Length = 173058 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 62 tcaacttacacaaatgcaaga 82 ||||||||||||||||||||| Sbjct: 23827 tcaacttacacaaatgcaaga 23847
>dbj|AK125828.1| Homo sapiens cDNA FLJ43840 fis, clone TESTI4006112 Length = 4156 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 113 ccggctcttttgtattctctg 133 ||||||||||||||||||||| Sbjct: 351 ccggctcttttgtattctctg 331
>gb|AC096677.2| Homo sapiens chromosome 1 clone RP11-134G8, complete sequence Length = 223735 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctgt 334 |||||||| |||||||||||||||| Sbjct: 99661 tttcttctccttttgctgctgctgt 99637
>gb|AC093153.2| Homo sapiens chromosome 1 clone RP11-477C23, complete sequence Length = 194427 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 299 ctaaacttaaatttcttcttctttt 323 ||||||||| ||||||||||||||| Sbjct: 88750 ctaaacttacatttcttcttctttt 88726
>gb|AC162174.4| Mus musculus chromosome 1, clone RP23-306P24, complete sequence Length = 211734 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 263 ttgtgctaatttgagctcttt 283 ||||||||||||||||||||| Sbjct: 188743 ttgtgctaatttgagctcttt 188763
>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02, complete sequence Length = 137327 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 77584 ttcttcttcttctgctgctgctgtt 77560
>gb|AC152832.3| Ornithorhynchus anatinus BAC clone OABb-104A1 from chromosome unknown, complete sequence Length = 161382 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 303 acttaaatttcttcttctttt 323 ||||||||||||||||||||| Sbjct: 8699 acttaaatttcttcttctttt 8679
>dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A05, full insert sequence Length = 1071 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 873 ttcttcttcttctgctgctgctgtt 849
>dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014L15, full insert sequence Length = 1096 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 886 ttcttcttcttctgctgctgctgtt 862
>dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F15, full insert sequence Length = 1126 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 916 ttcttcttcttctgctgctgctgtt 892
>dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C07, full insert sequence Length = 1134 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgctgtt 335 ||||||||||| ||||||||||||| Sbjct: 918 ttcttcttcttctgctgctgctgtt 894
>gb|AE003429.4| Drosophila melanogaster chromosome X, section 13 of 74 of the complete sequence Length = 326403 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 311 ttcttcttcttttgctgctgc 331 ||||||||||||||||||||| Sbjct: 13045 ttcttcttcttttgctgctgc 13025
>emb|AL935053.6| Zebrafish DNA sequence from clone CH211-162M14, complete sequence Length = 138341 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctg 330 ||||||||||||||||||||| Sbjct: 23879 tttcttcttcttttgctgctg 23899
>gb|AC123673.7| Mus musculus chromosome 1, clone RP23-258D13, complete sequence Length = 191401 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 126033 cttcttttgctgctgctgtt 126014
>gb|BC108439.1| Xenopus laevis cDNA clone MGC:130663 IMAGE:7768676, complete cds Length = 1070 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttcttcttttgctgctgctgtttg 337 |||||||| ||||||||||||||| Sbjct: 817 ttcttcttctgctgctgctgtttg 794
>ref|NM_128678.3| Arabidopsis thaliana DNA binding / transcription factor AT2G31220 mRNA, complete cds Length = 1695 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 594 tcttcttcttctgctgctgctgtt 617
>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete sequence Length = 166313 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 161 tgaggaagagagactcagga 180 |||||||||||||||||||| Sbjct: 35718 tgaggaagagagactcagga 35737
>gb|AC118688.10| Mus musculus chromosome 5, clone RP23-302F24, complete sequence Length = 176001 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 323 tgctgctgctgtttggttgg 342 |||||||||||||||||||| Sbjct: 109873 tgctgctgctgtttggttgg 109892
>ref|XM_469979.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1596 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 cttttgtattctctgaaaca 138 |||||||||||||||||||| Sbjct: 884 cttttgtattctctgaaaca 903
>gb|AC007579.5| Drosophila melanogaster clone BACR07M03, complete sequence Length = 193262 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 122153 cttcttttgctgctgctgtt 122134
>ref|XM_424497.1| PREDICTED: Gallus gallus similar to hypothetical protein (LOC426891), mRNA Length = 970 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 612 tctctgaagcagctgattcctttg 635 ||||||||| |||||||||||||| Sbjct: 766 tctctgaagaagctgattcctttg 789
>gb|AC120553.9| Mus musculus chromosome 15, clone RP24-338L24, complete sequence Length = 152510 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 70 cacaaatgcaagaaaacaaa 89 |||||||||||||||||||| Sbjct: 83888 cacaaatgcaagaaaacaaa 83869
>gb|AY750704.1| Tetranychus hydrangeae internal transcribed spacer 2, partial sequence Length = 646 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 acaacaaaggaacaacataa 251 |||||||||||||||||||| Sbjct: 549 acaacaaaggaacaacataa 530
>gb|AC134458.2| Mus musculus BAC clone RP23-358B17 from chromosome 18, complete sequence Length = 179314 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 273 ttgagctctttttcttcagt 292 |||||||||||||||||||| Sbjct: 55544 ttgagctctttttcttcagt 55563
>gb|AF313041.4| Homo sapiens chromosome 8 clone RP11-158K1 map q24.13, complete sequence Length = 193882 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ttttgctgctgctgtttggt 339 |||||||||||||||||||| Sbjct: 127037 ttttgctgctgctgtttggt 127056
>gb|AC113056.26| Mus musculus chromosome 1, clone RP23-252F11, complete sequence Length = 180229 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 tcttcttcttttgctgctgctgtt 335 ||||||||||||||||||| |||| Sbjct: 128475 tcttcttcttttgctgctgttgtt 128452
>gb|AC125152.5| Mus musculus BAC clone RP24-366J2 from chromosome 14, complete sequence Length = 134122 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctgctg 333 |||||||||||| ||||||||||| Sbjct: 46484 tttcttcttcttctgctgctgctg 46507
>gb|AC124603.5| Mus musculus BAC clone RP23-52H14 from chromosome 14, complete sequence Length = 179891 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctgctg 333 |||||||||||| ||||||||||| Sbjct: 170952 tttcttcttcttctgctgctgctg 170975
>ref|XM_800780.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053506715.40) partial mRNA Length = 1143 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctgctg 333 |||||||||||| ||||||||||| Sbjct: 416 tttcttcttcttctgctgctgctg 439
>ref|XM_760485.1| Theileria parva strain Muguga chromosome 1 hypothetical protein (TP01_0051) partial mRNA Length = 1884 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 aagaaaacaaacgcatggct 98 |||||||||||||||||||| Sbjct: 1774 aagaaaacaaacgcatggct 1793
>gb|AC004887.2| Homo sapiens PAC clone RP4-789I5 from 7, complete sequence Length = 176929 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 644 tcctcattctcctcttgtat 663 |||||||||||||||||||| Sbjct: 130633 tcctcattctcctcttgtat 130614
>gb|AC123714.6| Mus musculus chromosome 9, clone RP23-393E20, complete sequence Length = 217860 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 133767 cttcttttgctgctgctgtt 133786
>gb|AC157984.17| Medicago truncatula clone mth2-142a1, complete sequence Length = 122915 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 aaacttaaatttcttcttcttttg 324 |||||| ||||||||||||||||| Sbjct: 26778 aaacttcaatttcttcttcttttg 26755
>gb|AC106461.6| Rattus norvegicus 1 BAC CH230-208N10 (Children's Hospital Oakland Research Institute) complete sequence Length = 212829 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 547 gtcttcttccttgttgccaccatt 570 ||||||||||||||||||| |||| Sbjct: 21128 gtcttcttccttgttgccaacatt 21151
>emb|Z46894.1|DMFKBP39 D.melanogaster mRNA for FKBP39 Length = 1265 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgct 332 |||||||||||||||||||| Sbjct: 736 cttcttcttttgctgctgct 717
>emb|X70876.1|HVMYB2 H.vulgare myb2 mRNA Length = 1102 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 324 gctgctgctgtttggttggc 343 |||||||||||||||||||| Sbjct: 536 gctgctgctgtttggttggc 517
>gb|AC159819.2| Mus musculus BAC clone RP23-180C14 from chromosome 9, complete sequence Length = 211119 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 37888 cttcttttgctgctgctgtt 37907
>emb|AL731611.2|OSJN00253 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0072D08, complete sequence Length = 142814 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ttcttcttttgctgctgctg 333 |||||||||||||||||||| Sbjct: 138147 ttcttcttttgctgctgctg 138166
>emb|AL645966.30| Mouse DNA sequence from clone DN-144H19 on chromosome 3 Contains the 3' end of the Il21 gene for interleukin 21, a novel pseudogene (D530049N12RIK), a novel gene (C030047M16RIK), the Il2 gene for interleukin 2, the Tenr gene for testis nuclear RNA binding protein, a NADH dehydrogenase subunit 5 (ND5) pseudogene and a putative S1 RNA binding domain protein (PS1D) (2810055E05RIK) pseudogene, complete sequence Length = 161393 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ttaaatttcttcttcttttg 324 |||||||||||||||||||| Sbjct: 27109 ttaaatttcttcttcttttg 27128
>emb|AL606998.3|OSJN00125 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000223_09, complete sequence Length = 120583 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctg 333 |||||| ||||||||||||||||| Sbjct: 100080 tttctttttcttttgctgctgctg 100057
>gb|BT008608.1| Arabidopsis thaliana clone U50165 putative bHLH protein (At2g31220) mRNA, complete cds Length = 1408 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 484 tcttcttcttctgctgctgctgtt 507
>emb|CR450720.5| Zebrafish DNA sequence from clone DKEYP-51F11 in linkage group 2, complete sequence Length = 200950 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 53 catcatcactcaacttacac 72 |||||||||||||||||||| Sbjct: 170443 catcatcactcaacttacac 170462
>gb|AC090198.7| Homo sapiens chromosome 8, clone RP11-158K1, complete sequence Length = 156094 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 320 ttttgctgctgctgtttggt 339 |||||||||||||||||||| Sbjct: 127040 ttttgctgctgctgtttggt 127059
>gb|AC015813.12| Homo sapiens, clone RP11-159D12, complete sequence Length = 181494 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cttaaatttcttcttctttt 323 |||||||||||||||||||| Sbjct: 172084 cttaaatttcttcttctttt 172103
>emb|BX511018.18| Zebrafish DNA sequence from clone DKEY-241H1 in linkage group 4 Contains eight novel genes and three CpG islands, complete sequence Length = 95944 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cacaaatgcaagaaaacaaa 89 |||||||||||||||||||| Sbjct: 43516 cacaaatgcaagaaaacaaa 43535
>emb|BX649331.16| Zebrafish DNA sequence from clone DKEY-12N3 in linkage group 11, complete sequence Length = 252675 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cacaaatgcaagaaaacaaa 89 |||||||||||||||||||| Sbjct: 173775 cacaaatgcaagaaaacaaa 173794
>emb|AL928657.21| Zebrafish DNA sequence from clone CH211-194I10 in linkage group 3, complete sequence Length = 187734 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 actacattatgaatcatcat 58 |||||||||||||||||||| Sbjct: 50145 actacattatgaatcatcat 50126
>gb|AC112250.4| Homo sapiens BAC clone RP11-710E1 from 4, complete sequence Length = 79475 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 158 tgatgaggaagagagactca 177 |||||||||||||||||||| Sbjct: 59010 tgatgaggaagagagactca 58991
>ref|NM_206123.1| Drosophila melanogaster CG33464-PA (CG33464) mRNA, complete cds Length = 1576 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 525 cttcttttgctgctgctgtt 506
>gb|AC093270.3| Homo sapiens chromosome 5 clone RP11-342F17, complete sequence Length = 184585 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 299 ctaaacttaaatttcttctt 318 |||||||||||||||||||| Sbjct: 97502 ctaaacttaaatttcttctt 97483
>gb|AC006593.5| Arabidopsis thaliana chromosome 2 clone F16D14 map nga361, complete sequence Length = 84872 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 22382 tcttcttcttctgctgctgctgtt 22405
>gb|AY094814.1| Drosophila melanogaster LD30817 full insert cDNA Length = 1332 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgct 332 |||||||||||||||||||| Sbjct: 768 cttcttcttttgctgctgct 749
>ref|NM_079640.2| Drosophila melanogaster FK506-binding protein 1 CG6226-RA (FK506-bp1), mRNA Length = 1308 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 313 cttcttcttttgctgctgct 332 |||||||||||||||||||| Sbjct: 777 cttcttcttttgctgctgct 758
>gb|AE010227.1| Pyrococcus furiosus DSM 3638, section 102 of 173 of the complete genome Length = 10042 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 121 tttgtattctctgaaacacc 140 |||||||||||||||||||| Sbjct: 9998 tttgtattctctgaaacacc 9979
>gb|AF251695.1|AF251695 Arabidopsis thaliana putative transcription factor BHLH10 mRNA, complete cds Length = 1344 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 451 tcttcttcttctgctgctgctgtt 474
>gb|AC099024.1| Drosophila melanogaster, chromosome 2R, region 52X-53A, BAC clone BACR04J01, complete sequence Length = 182560 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 180637 cttcttttgctgctgctgtt 180656
>gb|AC121357.14| Mus musculus chromosome 15, clone RP23-56D7, complete sequence Length = 177867 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 70 cacaaatgcaagaaaacaaa 89 |||||||||||||||||||| Sbjct: 11450 cacaaatgcaagaaaacaaa 11469
>dbj|AK088542.1| Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430019N24 product:high mobility group 20A, full insert sequence Length = 4173 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 185 cttcttttgctgctgctgtt 204
>gb|AC007648.6|AC007648 Drosophila melanogaster, chromosome 3R, region 88E-88F, BAC clone BACR13A02, complete sequence Length = 166141 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cttcttcttttgctgctgct 332 |||||||||||||||||||| Sbjct: 91172 cttcttcttttgctgctgct 91191
>gb|AC090416.1|AC090416 Caenorhabditis briggsae cosmid CB042D07, complete sequence Length = 99298 Score = 40.1 bits (20), Expect = 9.5 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 308 aatttcttcttcttttgctgctgctgtt 335 ||||||||||| |||||||||||||||| Sbjct: 76642 aatttcttctt-ttttgctgctgctgtt 76668
>gb|AC110801.3| Homo sapiens BAC clone RP11-711M9 from 2, complete sequence Length = 81952 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctgctg 333 ||||||||||| |||||||||||| Sbjct: 6970 tttcttcttctgttgctgctgctg 6993
>gb|AY625483.1| Aspergillus niger manganese superoxide dismutase (MnSOD) gene, partial cds Length = 404 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgttgctgtcgagagcggag 400 |||||||||||||||||||| Sbjct: 70 cgttgctgtcgagagcggag 51
>gb|AC108906.9| Oryza sativa chromosome 3 BAC OSJNBa0087C10 genomic sequence, complete sequence Length = 144487 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cttttgtattctctgaaaca 138 |||||||||||||||||||| Sbjct: 81284 cttttgtattctctgaaaca 81265
>gb|AC160516.1| Medicago truncatula chromosome 7 BAC clone mth2-66d22, complete sequence Length = 116154 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 aaacttaaatttcttcttcttttg 324 |||||| ||||||||||||||||| Sbjct: 97550 aaacttcaatttcttcttcttttg 97527
>gb|AC005297.1| Homo sapiens X BAC GS1-466O4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 177503 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 12 atatgtatgaataaatacaa 31 |||||||||||||||||||| Sbjct: 88596 atatgtatgaataaatacaa 88577
>gb|AF190074.1|AF190074 Canella winterana phytochrome A (PHYA) gene, partial cds Length = 1047 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 556 tcttcttcttctgctgctgctgtt 533
>gb|BT005711.1| Arabidopsis thaliana clone RAFL15-38-K03 (R50165) putative bHLH protein (At2g31220) mRNA, complete cds Length = 1718 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 312 tcttcttcttttgctgctgctgtt 335 |||||||||| ||||||||||||| Sbjct: 597 tcttcttcttctgctgctgctgtt 620
>gb|AC084658.1|CBRG46L07 Caenorhabditis briggsae cosmid G46L07, complete sequence Length = 35227 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 154 accatgatgaggaagagaga 173 |||||||||||||||||||| Sbjct: 19805 accatgatgaggaagagaga 19824
>gb|AC084613.1|CBRG44E08 Caenorhabditis briggsae cosmid G44E08, complete sequence Length = 41830 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 ttcttcttttgctgctgctg 333 |||||||||||||||||||| Sbjct: 37052 ttcttcttttgctgctgctg 37071
>gb|AC004757.2| Homo sapiens chromosome 17, clone CTB-117K16, complete sequence Length = 107156 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cttaaatttcttcttctttt 323 |||||||||||||||||||| Sbjct: 41967 cttaaatttcttcttctttt 41948
>gb|AC079833.4| Homo sapiens BAC clone CTD-2170K17 from 2, complete sequence Length = 73264 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 315 tcttcttttgctgctgctgt 334 |||||||||||||||||||| Sbjct: 9948 tcttcttttgctgctgctgt 9967
>emb|BX294661.14| Zebrafish DNA sequence from clone CH211-199I18 in linkage group 20, complete sequence Length = 197237 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgctgctg 333 |||||||||||| ||||||||||| Sbjct: 159868 tttcttcttcttctgctgctgctg 159891
>emb|AJ000478.1|HTCYP81L Helianthus tuberosus mRNA for cytochrome P450, CYP81B1l Length = 1719 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 432 actcaccgtcgttctccttctcct 455 |||||||||||||||||| ||||| Sbjct: 31 actcaccgtcgttctcctcctcct 54
>gb|AY111165.1| Zea mays CL24291_1 mRNA sequence Length = 601 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 478 cttgctgttctcccacatcttggc 501 |||||||||||||||||| ||||| Sbjct: 486 cttgctgttctcccacattttggc 509
>gb|AC135251.2| Homo sapiens 12 BAC RP11-167E10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 70387 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 129 ctctgaaacacccaacacttgctt 152 ||||||||||| |||||||||||| Sbjct: 39184 ctctgaaacactcaacacttgctt 39207
>emb|AL627350.3| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0302E05, complete sequence Length = 61795 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctg 333 |||||| ||||||||||||||||| Sbjct: 6042 tttctttttcttttgctgctgctg 6019
>emb|Z36108.1|SCYBR239C S.cerevisiae chromosome II reading frame ORF YBR239c Length = 3190 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cttaaatttcttcttctttt 323 |||||||||||||||||||| Sbjct: 773 cttaaatttcttcttctttt 754
>emb|Z36107.1|SCYBR238C S.cerevisiae chromosome II reading frame ORF YBR238c Length = 3841 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 304 cttaaatttcttcttctttt 323 |||||||||||||||||||| Sbjct: 3560 cttaaatttcttcttctttt 3541
>gb|AE003708.3| Drosophila melanogaster chromosome 3R, section 46 of 118 of the complete sequence Length = 236375 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 313 cttcttcttttgctgctgct 332 |||||||||||||||||||| Sbjct: 135604 cttcttcttttgctgctgct 135623
>gb|AE003809.3| Drosophila melanogaster chromosome 2R, section 41 of 73 of the complete sequence Length = 262533 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 192205 cttcttttgctgctgctgtt 192224
>emb|CT010518.7| M.truncatula DNA sequence from clone MTH2-78A9 on chromosome 3, complete sequence Length = 135014 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 301 aaacttaaatttcttcttcttttg 324 |||||| ||||||||||||||||| Sbjct: 18801 aaacttcaatttcttcttcttttg 18778
>gb|BC087500.1| Xenopus laevis hypothetical LOC496082, mRNA (cDNA clone IMAGE:7204363), partial cds Length = 926 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 314 ttcttcttttgctgctgctgtttg 337 |||||||| ||||||||||||||| Sbjct: 742 ttcttcttctgctgctgctgtttg 719
>gb|AC005962.1|AC005962 Homo sapiens chromosome 17, clone hRPK.506_H_21, complete sequence Length = 162083 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 cttaaatttcttcttctttt 323 |||||||||||||||||||| Sbjct: 25682 cttaaatttcttcttctttt 25701
>emb|CT573501.1| Medicago truncatula chromosome 5 clone mth2-60o20, COMPLETE SEQUENCE Length = 114271 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 301 aaacttaaatttcttcttcttttg 324 |||||| ||||||||||||||||| Sbjct: 57798 aaactttaatttcttcttcttttg 57821
>gb|AC005556.1|AC005556 Drosophila melanogaster DNA sequence (P1s DS08658 (D196) and DS00960 (D268)), complete sequence Length = 98695 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 316 cttcttttgctgctgctgtt 335 |||||||||||||||||||| Sbjct: 75161 cttcttttgctgctgctgtt 75142
>emb|CT476826.2| Pan troglodytes chromosome X BAC RP43-034A07, complete sequence, whole genome shotgun sequence Length = 151456 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 12 atatgtatgaataaatacaa 31 |||||||||||||||||||| Sbjct: 7561 atatgtatgaataaatacaa 7580
>gb|AC147720.1| Gallus gallus BAC clone CH261-46I14 from chromosome unknown, complete sequence Length = 204711 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 317 ttcttttgctgctgctgttt 336 |||||||||||||||||||| Sbjct: 86340 ttcttttgctgctgctgttt 86321
>gb|AC141892.4| Mus musculus BAC clone RP23-388J12 from 13, complete sequence Length = 219862 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 323 tgctgctgctgtttggttgg 342 |||||||||||||||||||| Sbjct: 104598 tgctgctgctgtttggttgg 104579
>emb|AJ812006.1| Aspergillus niger sodB gene for putative manganese-containing superoxide dismutase, exons 1-3 Length = 1890 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 cgttgctgtcgagagcggag 400 |||||||||||||||||||| Sbjct: 1223 cgttgctgtcgagagcggag 1204
>emb|AL929001.7| Mouse DNA sequence from clone RP23-324H1 on chromosome 2, complete sequence Length = 147727 Score = 40.1 bits (20), Expect = 9.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 310 tttcttcttcttttgctgctgctg 333 |||||||||||| ||||||||||| Sbjct: 51468 tttcttcttcttctgctgctgctg 51445
>gb|AC155902.1| Loxodonta africana, clone Loxodonta africana-6767875L18, complete sequence Length = 37635 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 546 tgtcttcttccttgttgcca 565 |||||||||||||||||||| Sbjct: 5250 tgtcttcttccttgttgcca 5231
>gb|AC171726.1| Lycopersicon esculentum chromosome 01 clone C01HBa0088L02, complete sequence Length = 120525 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 310 tttcttcttcttttgctgct 329 |||||||||||||||||||| Sbjct: 107933 tttcttcttcttttgctgct 107952
>emb|AL662823.12| Mouse DNA sequence from clone RP23-243E17 on chromosome 3, complete sequence Length = 215241 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 305 ttaaatttcttcttcttttg 324 |||||||||||||||||||| Sbjct: 58450 ttaaatttcttcttcttttg 58469
>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete sequence Length = 153847 Score = 40.1 bits (20), Expect = 9.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 220 gtcacatagcatacaacaaa 239 |||||||||||||||||||| Sbjct: 25469 gtcacatagcatacaacaaa 25488 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,360,396 Number of Sequences: 3902068 Number of extensions: 9360396 Number of successful extensions: 250864 Number of sequences better than 10.0: 127 Number of HSP's better than 10.0 without gapping: 132 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 249928 Number of HSP's gapped (non-prelim): 936 length of query: 691 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 668 effective length of database: 17,143,297,704 effective search space: 11451722866272 effective search space used: 11451722866272 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
