ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd13d19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ010573.1|HVU010573 Hordeum vulgare chloroplast gene encoding ATP synthase CFO subunit I, exon 1 (partial) and exon 2 Length = 962 Score = 436 bits (220), Expect = e-119 Identities = 227/228 (99%), Gaps = 1/228 (0%) Strand = Plus / Minus Query: 9 aagtataagtaatgagcctatcctctatcttattttttatgtttatatttcaatataccg 68 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 782 aagtataagtaatgagcctatcctctatcttattttt-atgtttatatttcaatataccg 724 Query: 69 aaacctatataagactagataaatattaagaggactcttccgcctagataaaaatatatc 128 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 aaacctatataagactagataaatattaagaggactcttccgcctagataaaaatatatc 664 Query: 129 atggtcagcaaagttgtttctttatttatatttgccctttagttaataatttcaatttca 188 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 663 atggtcagcaaagttgtttctttatttatatttgccctttagttaataatttcaatttca 604 Query: 189 ttaagaaaaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 603 ttaagaaaaactaactaaataaatggaaaatgaaaattaatagaattc 556
>emb|X02595.1|CHTAATP1 T.aestivum chloroplast gene encoding ATP synthase CF-O subunit I & III Length = 2007 Score = 396 bits (200), Expect = e-107 Identities = 218/223 (97%), Gaps = 2/223 (0%) Strand = Plus / Minus Query: 14 taagtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacc 73 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 1356 taagtaatgagcctatcctctatcttcttttttatgtttatatttcaatataccgaaacc 1297 Query: 74 tatataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1296 tatataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggt 1237 Query: 134 cagcaaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaag 193 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 1236 cagcaaagttgtttctttatttttatttgccctct--ttaataatttcaatttcattaag 1179 Query: 194 aaaaactaactaaataaatggaaaatgaaaattaatagaattc 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1178 aaaaactaactaaataaatggaaaatgaaaattaatagaattc 1136
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 396 bits (200), Expect = e-107 Identities = 218/223 (97%), Gaps = 2/223 (0%) Strand = Plus / Minus Query: 14 taagtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacc 73 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 34036 taagtaatgagcctatcctctatcttcttttttatgtttatatttcaatataccgaaacc 33977 Query: 74 tatataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33976 tatataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggt 33917 Query: 134 cagcaaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaag 193 |||||||||||||||||||||| |||||||||| | ||||||||||||||||||||||| Sbjct: 33916 cagcaaagttgtttctttatttttatttgccctct--ttaataatttcaatttcattaag 33859 Query: 194 aaaaactaactaaataaatggaaaatgaaaattaatagaattc 236 ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33858 aaaaactaactaaataaatggaaaatgaaaattaatagaattc 33816
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 33575 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 33516 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 33515 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 33456 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 33455 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 33396 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 33395 aactaaatagaaaaatggaaaatgaaaatggatagaattc 33356
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 33575 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 33516 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 33515 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 33456 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 33455 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 33396 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 33395 aactaaatagaaaaatggaaaatgaaaatggatagaattc 33356
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 33533 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 33474 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 33473 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 33414 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 33413 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 33354 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 33353 aactaaatagaaaaatggaaaatgaaaatggatagaattc 33314
>gb|AC091680.7| Oryza sativa chromosome 10 BAC OSJNBa0034L04 genomic sequence, complete sequence Length = 148611 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 147164 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 147105 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 147104 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 147045 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 147044 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 146985 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 146984 aactaaatagaaaaatggaaaatgaaaatggatagaattc 146945
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 38858 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 38799 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 38798 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 38739 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 38738 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 38679 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 38678 aactaaatagaaaaatggaaaatgaaaatggatagaattc 38639
>emb|AL731605.3|OSJN00246 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0042F21, complete sequence Length = 167113 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 165666 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 165607 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 165606 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 165547 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 165546 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 165487 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 165486 aactaaatagaaaaatggaaaatgaaaatggatagaattc 165447
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 9080932 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 9080873 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 9080872 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 9080813 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 9080812 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 9080753 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 9080752 aactaaatagaaaaatggaaaatgaaaatggatagaattc 9080713
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Plus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 19961026 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 19961085 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 19961086 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 19961145 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 19961146 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 19961205 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 19961206 aactaaatagaaaaatggaaaatgaaaatggatagaattc 19961245 Score = 285 bits (144), Expect = 5e-74 Identities = 201/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 10325430 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 10325371 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| Sbjct: 10325370 ataagactagataaatattaagaggactcttctgcctagataaaaatctatcgtgggcag 10325311 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 10325310 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 10325251 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 10325250 aactaaatagaaaaatggaaaatgaaaatggatagaattc 10325211
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 24857472 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 24857413 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 24857412 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 24857353 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 24857352 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 24857293 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 24857292 aactaaatagaaaaatggaaaatgaaaatggatagaattc 24857253 Score = 135 bits (68), Expect = 1e-28 Identities = 104/115 (90%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 88 taaatattaagaggactcttccgcctagataaaaatatatcatggtcagcaaagttgttt 147 ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| Sbjct: 22878853 taaatattaagaggactcttccgtctagataaaaatcaatcatgggcagcaaagttgtt- 22878795 Query: 148 ctttatttatatttgccctttagttaataatttcaatttcattaagaaaaactaa 202 || |||| |||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 22878794 -ttcatttgtatttgccctttagtttaaattttcaatttcattaagaaaaactaa 22878741 Score = 85.7 bits (43), Expect = 8e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatataccgaaacctatataagactagataaatattaagagga 102 |||| |||||||||||||||| | ||||||| |||||||||| |||||||||||| | || Sbjct: 33607964 ttttctgtttatatttcaatacatcgaaacccatataagactggataaatattaataaga 33607905 Query: 103 ctcttccgcctagataaaa 121 | |||| |||||||||||| Sbjct: 33607904 cacttctgcctagataaaa 33607886
>gb|AC074232.11| Oryza sativa chromosome 10 BAC OSJNBb0005J14 genomic sequence, complete sequence Length = 116932 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 25017 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 24958 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 24957 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 24898 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 24897 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 24838 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 24837 aactaaatagaaaaatggaaaatgaaaatggatagaattc 24798
>dbj|AP006523.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1215B07 Length = 165957 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 18755 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 18696 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 18695 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 18636 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 18635 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 18576 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 18575 aactaaatagaaaaatggaaaatgaaaatggatagaattc 18536
>dbj|AP006847.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, fosmid clone:OSJNOa148N02 Length = 36400 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 22471 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 22412 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 22411 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 22352 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 22351 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 22292 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 22291 aactaaatagaaaaatggaaaatgaaaatggatagaattc 22252
>dbj|AK121120.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F07, full insert sequence Length = 3220 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 3191 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 3132 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 3131 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 3072 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 3071 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 3012 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 3011 aactaaatagaaaaatggaaaatgaaaatggatagaattc 2972
>dbj|AK110794.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-D06, full insert sequence Length = 1537 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 926 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 867 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 866 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 807 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 806 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 747 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 746 aactaaatagaaaaatggaaaatgaaaatggatagaattc 707
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Plus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 19972302 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 19972361 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 19972362 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 19972421 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 19972422 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 19972481 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 19972482 aactaaatagaaaaatggaaaatgaaaatggatagaattc 19972521 Score = 285 bits (144), Expect = 5e-74 Identities = 201/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 10331469 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 10331410 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| Sbjct: 10331409 ataagactagataaatattaagaggactcttctgcctagataaaaatctatcgtgggcag 10331350 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 10331349 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 10331290 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 10331289 aactaaatagaaaaatggaaaatgaaaatggatagaattc 10331250
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 293 bits (148), Expect = 2e-76 Identities = 202/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 33507 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 33448 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 33447 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 33388 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 33387 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 33328 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 33327 aactaaatagaaaaatggaaaatgaaaatggatagaattc 33288
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 289 bits (146), Expect = 3e-75 Identities = 200/218 (91%) Strand = Plus / Minus Query: 19 aatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctatat 78 ||||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||| Sbjct: 4363561 aatgagcctatcctctatcctctcttttctgtttatatttcaatataccgaaacccatat 4363502 Query: 79 aagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcagca 138 |||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| Sbjct: 4363501 aagactagataaatattaagaggactcttctgcctagataaaaatctgtcatgggcagca 4363442 Query: 139 aagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaaaa 198 ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 4363441 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 4363382 Query: 199 ctaactaaataaatggaaaatgaaaattaatagaattc 236 |||| || | ||||||||||||||||| ||||||||| Sbjct: 4363381 ctaaatagaaaaatggaaaatgaaaatggatagaattc 4363344
>dbj|AP006441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:B1279D09 Length = 134793 Score = 289 bits (146), Expect = 3e-75 Identities = 200/218 (91%) Strand = Plus / Minus Query: 19 aatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctatat 78 ||||||||||||||||||| | | |||| |||||||||||||||||||||||||| |||| Sbjct: 66379 aatgagcctatcctctatcctctcttttctgtttatatttcaatataccgaaacccatat 66320 Query: 79 aagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcagca 138 |||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||| Sbjct: 66319 aagactagataaatattaagaggactcttctgcctagataaaaatctgtcatgggcagca 66260 Query: 139 aagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaaaa 198 ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 66259 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 66200 Query: 199 ctaactaaataaatggaaaatgaaaattaatagaattc 236 |||| || | ||||||||||||||||| ||||||||| Sbjct: 66199 ctaaatagaaaaatggaaaatgaaaatggatagaattc 66162
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 287 bits (145), Expect = 1e-74 Identities = 203/221 (91%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||||| | | |||| ||||| |||||| ||||||| |||| ||| Sbjct: 35926 gtaatgagcctatcctctatcctctcttttctgtttgtatttctatatacccaaacttat 35867 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 35866 ataagactagatgaatattaagaggactcttccaactagataaaaatctatcatggtcag 35807 Query: 137 caaagttgtttctttatttatatttgccct-ttagttaataatttcaatttcattaagaa 195 ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||| Sbjct: 35806 caaagttgtttctttatttgtgtttgctctgttagttaataatttcaatttcattaagaa 35747 Query: 196 aaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 35746 aaactaactaaataaatggaaaataaaaattgatagaattc 35706
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 287 bits (145), Expect = 1e-74 Identities = 203/221 (91%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||||| | | |||| ||||| |||||| ||||||| |||| ||| Sbjct: 35923 gtaatgagcctatcctctatcctctcttttctgtttgtatttctatatacccaaacttat 35864 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 35863 ataagactagatgaatattaagaggactcttccaactagataaaaatctatcatggtcag 35804 Query: 137 caaagttgtttctttatttatatttgccct-ttagttaataatttcaatttcattaagaa 195 ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||| Sbjct: 35803 caaagttgtttctttatttgtgtttgctctgttagttaataatttcaatttcattaagaa 35744 Query: 196 aaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 35743 aaactaactaaataaatggaaaataaaaattgatagaattc 35703
>gb|BT024124.1| Zea mays clone EL01N0450D02 mRNA sequence Length = 1622 Score = 287 bits (145), Expect = 1e-74 Identities = 203/221 (91%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||||| | | |||| ||||| |||||| ||||||| |||| ||| Sbjct: 1566 gtaatgagcctatcctctatcctctcttttctgtttgtatttctatatacccaaacttat 1507 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 1506 ataagactagatgaatattaagaggactcttccaactagataaaaatctatcatggtcag 1447 Query: 137 caaagttgtttctttatttatatttgccct-ttagttaataatttcaatttcattaagaa 195 ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||| Sbjct: 1446 caaagttgtttctttatttgtgtttgctctgttagttaataatttcaatttcattaagaa 1387 Query: 196 aaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||||||||||||||||||||| |||||| ||||||||| Sbjct: 1386 aaactaactaaataaatggaaaataaaaattgatagaattc 1346
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 285 bits (144), Expect = 5e-74 Identities = 201/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 33574 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 33515 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 ||||||||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| Sbjct: 33514 ataagactagataaatattaagaggactcttccgcctagataaaaatctatcgtgggcag 33455 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||| ||||||||||||| Sbjct: 33454 caaagttgtttttttatttgtatttgccctttagttaaaattttcattttcattaagaaa 33395 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 33394 aactaaatagaaaaatggaaaatgaaaatggatagaattc 33355
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 285 bits (144), Expect = 5e-74 Identities = 201/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 31822 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 31763 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| Sbjct: 31762 ataagactagataaatattaagaggactcttctgcctagataaaaatctatcgtgggcag 31703 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 31702 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 31643 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 31642 aactaaatagaaaaatggaaaatgaaaatggatagaattc 31603
>gb|AC092750.2| Oryza sativa (japonica cultivar-group) cultivar Nipponbare from chromosome 10, complete sequence Length = 134933 Score = 285 bits (144), Expect = 5e-74 Identities = 201/220 (91%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | |||| |||||||||||||||||||||||||| || Sbjct: 106755 gtaatgagcctatcctctaccctctcttttctgtttatatttcaatataccgaaacccat 106696 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||||||||||||||||||||||| |||||||||||||| |||| ||| ||| Sbjct: 106695 ataagactagataaatattaagaggactcttctgcctagataaaaatctatcgtgggcag 106636 Query: 137 caaagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaa 196 ||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||| Sbjct: 106635 caaagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaa 106576 Query: 197 aactaactaaataaatggaaaatgaaaattaatagaattc 236 |||||| || | ||||||||||||||||| ||||||||| Sbjct: 106575 aactaaatagaaaaatggaaaatgaaaatggatagaattc 106536
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 280 bits (141), Expect = 3e-72 Identities = 202/221 (91%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||||| | | |||| ||||| |||||| ||||||| |||| ||| Sbjct: 98061 gtaatgagcctatcctctatcctctcttttctgtttgtatttctatatacccaaacttat 98002 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 98001 ataagactagatgaatattaagaggactcttccaactagataaaaatctatcatggtcag 97942 Query: 137 caaagttgtttctttatttatatttgccct-ttagttaataatttcaatttcattaagaa 195 ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||| Sbjct: 97941 caaagttgtttctttatttgtgtttgctctgttagttaataatttcaatttcattaagaa 97882 Query: 196 aaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||| ||||||||||||||||||| |||||| ||||||||| Sbjct: 97881 aaacaaactaaataaatggaaaataaaaattgatagaattc 97841
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 280 bits (141), Expect = 3e-72 Identities = 202/221 (91%), Gaps = 1/221 (0%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||||| | | |||| ||||| |||||| ||||||| |||| ||| Sbjct: 36434 gtaatgagcctatcctctatcctctcttttctgtttgtatttctatatacccaaacttat 36375 Query: 77 ataagactagataaatattaagaggactcttccgcctagataaaaatatatcatggtcag 136 |||||||||||| |||||||||||||||||||| |||||||||||| |||||||||||| Sbjct: 36374 ataagactagatgaatattaagaggactcttccaactagataaaaatctatcatggtcag 36315 Query: 137 caaagttgtttctttatttatatttgccct-ttagttaataatttcaatttcattaagaa 195 ||||||||||||||||||| | ||||| || ||||||||||||||||||||||||||||| Sbjct: 36314 caaagttgtttctttatttgtgtttgctctgttagttaataatttcaatttcattaagaa 36255 Query: 196 aaactaactaaataaatggaaaatgaaaattaatagaattc 236 |||| ||||||||||||||||||| |||||| ||||||||| Sbjct: 36254 aaacaaactaaataaatggaaaataaaaattgatagaattc 36214
>gb|AC105747.4| Oryza sativa chromosome 3 BAC OSJNBb0101N11 genomic sequence, complete sequence Length = 138345 Score = 258 bits (130), Expect = 1e-65 Identities = 178/194 (91%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatataccgaaacctatataagactagataaatattaagagga 102 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 19132 ttttctgtttatatttcaatataccgaaacccatataagactagataaatattaagagga 19073 Query: 103 ctcttccgcctagataaaaatatatcatggtcagcaaagttgtttctttatttatatttg 162 ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||| ||||| Sbjct: 19072 ctcttccgcctagataaaaatctatcgtgggcagcaaagttgtttttttatttgtatttt 19013 Query: 163 ccctttagttaataatttcaatttcattaagaaaaactaactaaataaatggaaaatgaa 222 |||||||||||| | ||| ||||||||||||||||||||| || | |||||||||||||| Sbjct: 19012 ccctttagttaaaattttgaatttcattaagaaaaactaaatagaaaaatggaaaatgaa 18953 Query: 223 aattaatagaattc 236 ||| ||||||||| Sbjct: 18952 aatggatagaattc 18939
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 258 bits (130), Expect = 1e-65 Identities = 178/194 (91%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatataccgaaacctatataagactagataaatattaagagga 102 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27318925 ttttctgtttatatttcaatataccgaaacccatataagactagataaatattaagagga 27318866 Query: 103 ctcttccgcctagataaaaatatatcatggtcagcaaagttgtttctttatttatatttg 162 ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||| ||||| Sbjct: 27318865 ctcttccgcctagataaaaatctatcgtgggcagcaaagttgtttttttatttgtatttt 27318806 Query: 163 ccctttagttaataatttcaatttcattaagaaaaactaactaaataaatggaaaatgaa 222 |||||||||||| | ||| ||||||||||||||||||||| || | |||||||||||||| Sbjct: 27318805 ccctttagttaaaattttgaatttcattaagaaaaactaaatagaaaaatggaaaatgaa 27318746 Query: 223 aattaatagaattc 236 ||| ||||||||| Sbjct: 27318745 aatggatagaattc 27318732 Score = 109 bits (55), Expect = 6e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 115 gataaaaatatatcatggtcagcaaagttgtttctttatttatatttgccctttagttaa 174 ||||||||| |||||||| || ||||||| ||| ||||||| ||||| |||||||||||| Sbjct: 17423020 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 17423079 Query: 175 taatttcaatttcattaagaaaaactaactaaataaatggaaaatgaaaat 225 | ||||||||||||||||||||||||| || | |||| |||||||||||| Sbjct: 17423080 aattttcaatttcattaagaaaaactaaatagaaaaat-gaaaatgaaaat 17423129 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | ||||||||||| |||||||||||||| |||| || Sbjct: 17422936 gtaatgagcctatcctctaccctctcttttatgtttacatttcaatataccgcaacccat 17422995 Query: 77 ataagactagataaatattaagagga 102 |||| ||||||||||||||||||||| Sbjct: 17422996 ataatactagataaatattaagagga 17423021
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 258 bits (130), Expect = 1e-65 Identities = 178/194 (91%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatataccgaaacctatataagactagataaatattaagagga 102 |||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 27410248 ttttctgtttatatttcaatataccgaaacccatataagactagataaatattaagagga 27410189 Query: 103 ctcttccgcctagataaaaatatatcatggtcagcaaagttgtttctttatttatatttg 162 ||||||||||||||||||||| |||| ||| |||||||||||||| ||||||| ||||| Sbjct: 27410188 ctcttccgcctagataaaaatctatcgtgggcagcaaagttgtttttttatttgtatttt 27410129 Query: 163 ccctttagttaataatttcaatttcattaagaaaaactaactaaataaatggaaaatgaa 222 |||||||||||| | ||| ||||||||||||||||||||| || | |||||||||||||| Sbjct: 27410128 ccctttagttaaaattttgaatttcattaagaaaaactaaatagaaaaatggaaaatgaa 27410069 Query: 223 aattaatagaattc 236 ||| ||||||||| Sbjct: 27410068 aatggatagaattc 27410055 Score = 109 bits (55), Expect = 6e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Plus Query: 115 gataaaaatatatcatggtcagcaaagttgtttctttatttatatttgccctttagttaa 174 ||||||||| |||||||| || ||||||| ||| ||||||| ||||| |||||||||||| Sbjct: 17416561 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 17416620 Query: 175 taatttcaatttcattaagaaaaactaactaaataaatggaaaatgaaaat 225 | ||||||||||||||||||||||||| || | |||| |||||||||||| Sbjct: 17416621 aattttcaatttcattaagaaaaactaaatagaaaaat-gaaaatgaaaat 17416670 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Plus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | ||||||||||| |||||||||||||| |||| || Sbjct: 17416477 gtaatgagcctatcctctaccctctcttttatgtttacatttcaatataccgcaacccat 17416536 Query: 77 ataagactagataaatattaagagga 102 |||| ||||||||||||||||||||| Sbjct: 17416537 ataatactagataaatattaagagga 17416562
>dbj|AP005640.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0006O15 Length = 139723 Score = 135 bits (68), Expect = 1e-28 Identities = 104/115 (90%), Gaps = 2/115 (1%) Strand = Plus / Minus Query: 88 taaatattaagaggactcttccgcctagataaaaatatatcatggtcagcaaagttgttt 147 ||||||||||||||||||||||| |||||||||||| ||||||| ||||||||||||| Sbjct: 112191 taaatattaagaggactcttccgtctagataaaaatcaatcatgggcagcaaagttgtt- 112133 Query: 148 ctttatttatatttgccctttagttaataatttcaatttcattaagaaaaactaa 202 || |||| |||||||||||||||| | | ||||||||||||||||||||||||| Sbjct: 112132 -ttcatttgtatttgccctttagtttaaattttcaatttcattaagaaaaactaa 112079
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 123 bits (62), Expect = 4e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 139 aagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaaaa 198 ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 9756530 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 9756471 Query: 199 ctaactaaataaatggaaaatgaaaattaatagaattc 236 |||| || | ||||||||||||||||| ||||||||| Sbjct: 9756470 ctaaatagaaaaatggaaaatgaaaatggatagaattc 9756433 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 19303529 aagaaaaactaactaaataa 19303548 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 15369867 aagaaaaactaactaaataa 15369886
>dbj|AP005822.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0456E06 Length = 164353 Score = 123 bits (62), Expect = 4e-25 Identities = 89/98 (90%) Strand = Plus / Minus Query: 139 aagttgtttctttatttatatttgccctttagttaataatttcaatttcattaagaaaaa 198 ||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||| Sbjct: 46772 aagttgtttttttatttgtatttgccctttagttaaaattttcaatttcattaagaaaaa 46713 Query: 199 ctaactaaataaatggaaaatgaaaattaatagaattc 236 |||| || | ||||||||||||||||| ||||||||| Sbjct: 46712 ctaaatagaaaaatggaaaatgaaaatggatagaattc 46675
>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19 map E30331S, complete sequence Length = 164820 Score = 109 bits (55), Expect = 6e-21 Identities = 98/111 (88%), Gaps = 1/111 (0%) Strand = Plus / Minus Query: 115 gataaaaatatatcatggtcagcaaagttgtttctttatttatatttgccctttagttaa 174 ||||||||| |||||||| || ||||||| ||| ||||||| ||||| |||||||||||| Sbjct: 140723 gataaaaatctatcatgggcaacaaagttatttttttatttgtattttccctttagttaa 140664 Query: 175 taatttcaatttcattaagaaaaactaactaaataaatggaaaatgaaaat 225 | ||||||||||||||||||||||||| || | |||| |||||||||||| Sbjct: 140663 aattttcaatttcattaagaaaaactaaatagaaaaat-gaaaatgaaaat 140614 Score = 107 bits (54), Expect = 2e-20 Identities = 78/86 (90%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctatcttattttttatgtttatatttcaatataccgaaacctat 76 ||||||||||||||||||| | | | ||||||||||| |||||||||||||| |||| || Sbjct: 140807 gtaatgagcctatcctctaccctctcttttatgtttacatttcaatataccgcaacccat 140748 Query: 77 ataagactagataaatattaagagga 102 |||| ||||||||||||||||||||| Sbjct: 140747 ataatactagataaatattaagagga 140722
>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1046_F07 Length = 114184 Score = 85.7 bits (43), Expect = 8e-14 Identities = 70/79 (88%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatataccgaaacctatataagactagataaatattaagagga 102 |||| |||||||||||||||| | ||||||| |||||||||| |||||||||||| | || Sbjct: 78635 ttttctgtttatatttcaatacatcgaaacccatataagactggataaatattaataaga 78576 Query: 103 ctcttccgcctagataaaa 121 | |||| |||||||||||| Sbjct: 78575 cacttctgcctagataaaa 78557
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 134 cagcaaagttgtttctttatttatatttgccctttagttaataatttcaa 183 |||||||||||||| ||||||| |||||||||||||||||| | |||||| Sbjct: 4676514 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 4676465
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Minus Query: 134 cagcaaagttgtttctttatttatatttgccctttagttaataatttcaa 183 |||||||||||||| ||||||| |||||||||||||||||| | |||||| Sbjct: 4676495 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 4676446
>emb|AL928750.3|CNS08CBN Oryza sativa chromosome 12, . BAC OSJNBa0063C08 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 147355 Score = 67.9 bits (34), Expect = 2e-08 Identities = 46/50 (92%) Strand = Plus / Plus Query: 134 cagcaaagttgtttctttatttatatttgccctttagttaataatttcaa 183 |||||||||||||| ||||||| |||||||||||||||||| | |||||| Sbjct: 75613 cagcaaagttgtttttttatttgtatttgccctttagttaaaattttcaa 75662
>gb|AC150751.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNOa0279P04, complete sequence Length = 32479 Score = 54.0 bits (27), Expect = 3e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 150 ttatttatatttgccctttagttaataatttcaatttcattaagaaaaact 200 |||||| |||||| ||||||||||| | | |||||||||||| |||||||| Sbjct: 26193 ttatttgtatttgtcctttagttaaaattgtcaatttcattatgaaaaact 26243
>gb|AY916449.1| Phalaenopsis aphrodite subsp. formosana plastid, complete genome Length = 148964 Score = 48.1 bits (24), Expect = 0.018 Identities = 24/24 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttctttattt 155 |||||||||||||||||||||||| Sbjct: 13175 gtcagcaaagttgtttctttattt 13198
>emb|AJ428413.1|CFE428413 Calycanthus fertilis var. ferax complete chloroplast genome Length = 153337 Score = 46.1 bits (23), Expect = 0.073 Identities = 48/55 (87%), Gaps = 1/55 (1%) Strand = Plus / Plus Query: 98 gaggactcttccgcctagataaaaa-tatatcatggtcagcaaagttgtttcttt 151 ||||||||||||| | ||| ||||| | | |||| |||||||||||||||||||| Sbjct: 12777 gaggactcttccgaccagacaaaaaatctgtcattgtcagcaaagttgtttcttt 12831
>gb|AC104665.3| Homo sapiens BAC clone RP11-724N3 from 2, complete sequence Length = 42949 Score = 46.1 bits (23), Expect = 0.073 Identities = 23/23 (100%) Strand = Plus / Minus Query: 39 tattttttatgtttatatttcaa 61 ||||||||||||||||||||||| Sbjct: 35001 tattttttatgtttatatttcaa 34979
>gb|AF250209.1|AF250209 Gossypium hirsutum A-subgenome alcohol dehydrogenase E (AdhE) gene, partial cds Length = 1331 Score = 46.1 bits (23), Expect = 0.073 Identities = 29/31 (93%) Strand = Plus / Minus Query: 196 aaactaactaaataaatggaaaatgaaaatt 226 |||||||| ||||||||||||||||||||| Sbjct: 664 aaactaacagaataaatggaaaatgaaaatt 634
>gb|AC009206.21| Drosophila melanogaster clone BACR15A11, complete sequence Length = 195221 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Plus Query: 133 tcagcaaagttgtttctttatttatatttg 162 |||||||| |||||| |||||||||||||| Sbjct: 64105 tcagcaaaattgtttttttatttatatttg 64134
>gb|AC121938.3| Mus musculus BAC clone RP24-208D21 from chromosome 6, complete sequence Length = 144353 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 34 tatcttattttttatgtttata 55 |||||||||||||||||||||| Sbjct: 61583 tatcttattttttatgtttata 61604
>emb|Z00044.2|CHNTXX Nicotiana tabacum chloroplast genome DNA Length = 155943 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12846 aaaaatatgtaattgtcagcaaagttgtttcttt 12879
>ref|XM_740900.1| Plasmodium chabaudi chabaudi T-complex protein eta subunit (PC000721.02.0) partial mRNA Length = 1605 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 119 aaaatatatcatggtcagcaaa 140 |||||||||||||||||||||| Sbjct: 919 aaaatatatcatggtcagcaaa 898
>emb|AL360230.20| Human DNA sequence from clone RP11-379I13 on chromosome 10 Contains the PTER gene for phosphotriesterase related, the 3' end of the gene for a novel protein possible ortholog of mouse C1q-like protein (gliacolin) and a CpG island, complete sequence Length = 162599 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatttcaata 63 ||||||||||||||| |||||||||| Sbjct: 16178 ttattttttatgtttttatttcaata 16203
>emb|AJ316582.1|ABE316582 Atropa belladonna complete chloroplast genome, strain Ab5p(kan) Length = 156687 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12619 aaaaatatgtaattgtcagcaaagttgtttcttt 12652
>emb|CR925861.1| Zebrafish DNA sequence from clone DKEY-187K19 in linkage group 17, complete sequence Length = 8027 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 205 aaataaatggaaaatgaaaatt 226 |||||||||||||||||||||| Sbjct: 7246 aaataaatggaaaatgaaaatt 7267
>gb|AC092691.3| Homo sapiens 3q BAC RP11-768G7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 170215 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 gaaaatgaaaattaatagaatt 235 |||||||||||||||||||||| Sbjct: 118950 gaaaatgaaaattaatagaatt 118971
>gb|DQ386163.1| Solanum tuberosum cultivar Desiree chloroplast, complete genome Length = 155298 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12571 aaaaatatgtaattgtcagcaaagttgtttcttt 12604
>gb|AC090138.5| Homo sapiens, clone RP11-63C8, complete sequence Length = 189231 Score = 44.1 bits (22), Expect = 0.29 Identities = 22/22 (100%) Strand = Plus / Minus Query: 141 gttgtttctttatttatatttg 162 |||||||||||||||||||||| Sbjct: 49425 gttgtttctttatttatatttg 49404
>gb|AC024339.11| Homo sapiens chromosome 10, clone RP11-281O24, complete sequence Length = 195191 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 38 ttattttttatgtttatatttcaata 63 ||||||||||||||| |||||||||| Sbjct: 154113 ttattttttatgtttttatttcaata 154088
>gb|AE003788.5| Drosophila melanogaster chromosome 2R, section 1 of 73 of the complete sequence Length = 585533 Score = 44.1 bits (22), Expect = 0.29 Identities = 28/30 (93%) Strand = Plus / Minus Query: 133 tcagcaaagttgtttctttatttatatttg 162 |||||||| |||||| |||||||||||||| Sbjct: 221802 tcagcaaaattgtttttttatttatatttg 221773
>gb|AY582139.1| Panax ginseng chloroplast, complete genome Length = 156318 Score = 44.1 bits (22), Expect = 0.29 Identities = 46/54 (85%) Strand = Plus / Plus Query: 98 gaggactcttccgcctagataaaaatatatcatggtcagcaaagttgtttcttt 151 ||||||||||| | | | | |||||||| | || |||||||||||||||||||| Sbjct: 13565 gaggactcttctgaccaaacaaaaatatgtaattgtcagcaaagttgtttcttt 13618 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 17 gtaatgagcctatcctctat 36 |||||||||||||||||||| Sbjct: 13473 gtaatgagcctatcctctat 13492
>emb|AM087200.2| Lycopersicon esculentum complete chloroplast genome Length = 155460 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12441 aaaaatatgtaattgtcagcaaagttgtttcttt 12474
>gb|DQ347959.1| Lycopersicon esculentum cultivar LA3023 chloroplast, complete genome Length = 155461 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12438 aaaaatatgtaattgtcagcaaagttgtttcttt 12471
>gb|DQ347958.1| Solanum bulbocastanum cultivar PT29 chloroplast, complete genome Length = 155371 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12452 aaaaatatgtaattgtcagcaaagttgtttcttt 12485
>gb|AE017198.1| Lactobacillus johnsonii NCC 533, complete genome Length = 1992676 Score = 44.1 bits (22), Expect = 0.29 Identities = 25/26 (96%) Strand = Plus / Minus Query: 181 caatttcattaagaaaaactaactaa 206 |||||||||||||||| ||||||||| Sbjct: 1424736 caatttcattaagaaagactaactaa 1424711
>dbj|AB237912.1| Nicotiana sylvestris chloroplast DNA, complete sequence Length = 155941 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12844 aaaaatatgtaattgtcagcaaagttgtttcttt 12877
>dbj|AB240139.1| Nicotiana tomentosiformis chloroplast DNA, complete sequence Length = 155745 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12784 aaaaatatgtaattgtcagcaaagttgtttcttt 12817
>gb|DQ231562.1| Solanum tuberosum chloroplast, complete genome Length = 155312 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12571 aaaaatatgtaattgtcagcaaagttgtttcttt 12604
>gb|M10124.1|TOBCPATPB Tobacco chloroplast ATPase subunits I and III gene, complete cds, and ATPase subunit alpha, 5' end Length = 2550 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Minus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 1758 aaaaatatgtaattgtcagcaaagttgtttcttt 1725
>emb|AJ345048.1|HHE345048 Hedera helix chloroplast microsatellite (90 bp) Length = 90 Score = 44.1 bits (22), Expect = 0.29 Identities = 31/34 (91%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttcttt 151 |||||||| | || |||||||||||||||||||| Sbjct: 12 aaaaatatgtaattgtcagcaaagttgtttcttt 45
>gb|AC091677.12| Mus musculus chromosome 18, clone RP23-131E5, complete sequence Length = 222121 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 ttattttttatgtttatattt 58 ||||||||||||||||||||| Sbjct: 61805 ttattttttatgtttatattt 61785
>gb|AE002115.1| Ureaplasma parvum serovar 3 str. ATCC 700970 section 16 of 59 of the complete genome Length = 11126 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 169 agttaataatttcaatttcat 189 ||||||||||||||||||||| Sbjct: 9269 agttaataatttcaatttcat 9249
>gb|AC146235.2| Pan troglodytes BAC clone CH251-212L1 from Y, complete sequence Length = 163569 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cttattttttatgtttatatt 57 ||||||||||||||||||||| Sbjct: 34194 cttattttttatgtttatatt 34214
>gb|AC146194.2| Pan troglodytes BAC clone CH251-490J23 from Y, complete sequence Length = 182769 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttattttttatgtttatatt 57 ||||||||||||||||||||| Sbjct: 9129 cttattttttatgtttatatt 9109
>emb|CR956417.1| Pig DNA sequence from clone CH242-300K12 on chromosome 17, complete sequence Length = 176004 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 agaaaaactaactaaataaat 212 ||||||||||||||||||||| Sbjct: 34749 agaaaaactaactaaataaat 34729
>gb|AY165741.1| Ilex aquifolium chloroplast atpF gene, intron sequence Length = 89 Score = 42.1 bits (21), Expect = 1.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctt 150 |||||||| | || ||||||||||||||||||| Sbjct: 12 aaaaatatgtaattgtcagcaaagttgtttctt 44
>gb|DQ424856.1| Vitis vinifera cultivar Maxxa chloroplast, complete genome Length = 160928 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttctttatttatatt 160 |||||||||||||||||||| ||| |||| Sbjct: 14012 gtcagcaaagttgtttctttttttttatt 14040
>emb|AL162712.16| Human DNA sequence from clone RP11-158A8 on chromosome 13 Contains a novel gene, complete sequence Length = 115331 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 aatttcaatttcattaagaaa 196 ||||||||||||||||||||| Sbjct: 14612 aatttcaatttcattaagaaa 14632
>emb|AL121896.11|HSA287B20 Human DNA sequence from clone RP11-287B20 on chromosome 20 Contains part of the gene for KIAA1272 for a protein similar to rat tulip proteins 1 and 2, complete sequence Length = 168545 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 194 aaaaactaactaaataaatggaaaa 218 |||||||| |||||||||||||||| Sbjct: 154881 aaaaactacctaaataaatggaaaa 154857
>emb|AL035555.11|HS217P22 Human DNA sequence from clone RP1-217P22 on chromosome 6p21.1-21.31 Contains part of the DNAH8 gene for dynein axonemal heavy polypeptide 8 and a novel pseudogene similar to part of zuotin related factor-1 (ZRF1), complete sequence Length = 130796 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aatggaaaatgaaaattaata 230 ||||||||||||||||||||| Sbjct: 76287 aatggaaaatgaaaattaata 76267
>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome Length = 5205140 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatgg 214 ||||||||||||||||||||| Sbjct: 220067 aaaaactaactaaataaatgg 220087
>emb|AL034556.4|PFMAL3P5 Plasmodium falciparum MAL3P5, complete sequence Length = 86826 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatattt 58 ||||||||||||||||||||| Sbjct: 13891 ttattttttatgtttatattt 13911
>emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chromosome 11 Contains the 3' end of the Ddc gene for dopa decarboxylase, the Fignl1 gene for fidgetin-like 1, the Znfn1a1 gene for zinc finger protein, subfamily 1A, 1 (Ikaros), two novel genes and two CpG islands, complete sequence Length = 203257 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaatatacc 67 |||||||||||||||| |||||||| Sbjct: 190717 ttttatgtttatatttaaatatacc 190693
>emb|BX511260.11| Zebrafish DNA sequence from clone CH211-121A2, complete sequence Length = 190733 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataaatgga 215 |||||||||||| |||||||||||| Sbjct: 21362 aagaaaaactaattaaataaatgga 21386
>emb|BX571836.25| Zebrafish DNA sequence from clone CH211-244M9 in linkage group 17, complete sequence Length = 178691 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataaa 211 ||||||||||||||||||||| Sbjct: 84579 aagaaaaactaactaaataaa 84599
>gb|AC107241.4| Homo sapiens chromosome 15, clone CTD-2501E16, complete sequence Length = 105583 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 tatcctctatcttatttttta 47 ||||||||||||||||||||| Sbjct: 7306 tatcctctatcttatttttta 7286
>dbj|BS000625.3| Pan troglodytes chromosome Y clone: PTB-072P24, complete sequence Length = 168181 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 37 cttattttttatgtttatatt 57 ||||||||||||||||||||| Sbjct: 76226 cttattttttatgtttatatt 76246
>gb|DP000054.1| Pan troglodytes chromosome Y, partial sequence Length = 23952694 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttattttttatgtttatatt 57 ||||||||||||||||||||| Sbjct: 18432057 cttattttttatgtttatatt 18432037
>gb|AC022402.5| Homo sapiens chromosome 06 clone RP11-70I3, complete sequence Length = 164270 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 210 aatggaaaatgaaaattaata 230 ||||||||||||||||||||| Sbjct: 53320 aatggaaaatgaaaattaata 53300
>gb|AC093909.2| Homo sapiens BAC clone RP11-756P10 from 4, complete sequence Length = 181886 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatattt 58 ||||||||||||||||||||| Sbjct: 168799 ttattttttatgtttatattt 168819
>gb|AC009560.10| Homo sapiens chromosome 15, clone RP11-219B17, complete sequence Length = 177308 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 27 tatcctctatcttatttttta 47 ||||||||||||||||||||| Sbjct: 20156 tatcctctatcttatttttta 20176
>gb|AC008573.5| Homo sapiens chromosome 5 clone CTC-551I11, complete sequence Length = 169544 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 attaagaaaaactaactaaataaat 212 ||||| ||||||||||||||||||| Sbjct: 95912 attaaaaaaaactaactaaataaat 95888
>emb|CR391943.6| Zebrafish DNA sequence from clone DKEY-15M21 in linkage group 9, complete sequence Length = 212667 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatattt 58 ||||||||||||||||||||| Sbjct: 58454 ttattttttatgtttatattt 58474
>gb|AC153946.10| Mus musculus 10 BAC RP24-416M20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 151904 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aagactagataaatattaaga 99 ||||||||||||||||||||| Sbjct: 1791 aagactagataaatattaaga 1771
>gb|AE015928.1| Bacteroides thetaiotaomicron VPI-5482, complete genome Length = 6260361 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataaa 211 ||||||||||||||||||||| Sbjct: 4559552 aagaaaaactaactaaataaa 4559572
>gb|AC026446.4| Homo sapiens chromosome 5 clone CTD-2313E2, complete sequence Length = 135499 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 188 attaagaaaaactaactaaataaat 212 ||||| ||||||||||||||||||| Sbjct: 130016 attaaaaaaaactaactaaataaat 129992
>gb|AC006091.10|AC006091 Drosophila melanogaster, chromosome 3R, region 91F1-91F13, BAC clone BACR48G05, complete sequence Length = 174118 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tttcaatataccgaaacctatataa 80 ||||||||||| ||||||||||||| Sbjct: 22406 tttcaatatacggaaacctatataa 22430
>gb|AC106895.5| Homo sapiens BAC clone RP11-161D15 from 4, complete sequence Length = 135450 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 ataaatggaaaatgaaaatta 227 ||||||||||||||||||||| Sbjct: 119509 ataaatggaaaatgaaaatta 119529
>gb|AC007560.4| Homo sapiens BAC clone RP11-386G20 from 2, complete sequence Length = 124185 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 189 ttaagaaaaactaactaaataaatg 213 ||||||||| ||||||||||||||| Sbjct: 122444 ttaagaaaatctaactaaataaatg 122420
>gb|AC010877.3|AC010877 Homo sapiens BAC clone RP11-218F6 from Y, complete sequence Length = 137229 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 37 cttattttttatgtttatatt 57 ||||||||||||||||||||| Sbjct: 103487 cttattttttatgtttatatt 103467
>gb|AC010636.6|AC010636 Homo sapiens chromosome 19 clone CTD-2332E11, complete sequence Length = 179393 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 192 agaaaaactaactaaataaat 212 ||||||||||||||||||||| Sbjct: 36124 agaaaaactaactaaataaat 36104
>emb|BX255909.5| Zebrafish DNA sequence from clone CH211-235O3 in linkage group 19, complete sequence Length = 180994 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataaatgga 215 |||||||||||| |||||||||||| Sbjct: 155157 aagaaaaactaattaaataaatgga 155133
>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome Length = 5277274 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatgg 214 ||||||||||||||||||||| Sbjct: 266840 aaaaactaactaaataaatgg 266860
>gb|CP000016.1| Candidatus Blochmannia pennsylvanicus str. BPEN, complete genome Length = 791654 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 182 aatttcattaagaaaaactaa 202 ||||||||||||||||||||| Sbjct: 83555 aatttcattaagaaaaactaa 83535
>emb|BX908391.12| Zebrafish DNA sequence from clone CH211-151H10 in linkage group 18, complete sequence Length = 151841 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatattt 58 ||||||||||||||||||||| Sbjct: 27971 ttattttttatgtttatattt 27991
>emb|CT806410.3| CH251-575K15, complete sequence Length = 155922 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataaatggaaaat 219 |||||||||| || ||||||||||||||| Sbjct: 108752 aagaaaaactcacaaaataaatggaaaat 108780
>gb|AC153947.3| Mus musculus 10 BAC RP24-408C20 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 209414 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 79 aagactagataaatattaaga 99 ||||||||||||||||||||| Sbjct: 189798 aagactagataaatattaaga 189778
>gb|AE003724.3| Drosophila melanogaster chromosome 3R, section 62 of 118 of the complete sequence Length = 232330 Score = 42.1 bits (21), Expect = 1.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 tttcaatataccgaaacctatataa 80 ||||||||||| ||||||||||||| Sbjct: 212345 tttcaatatacggaaacctatataa 212369
>emb|CT573089.2| RP43-058A24, complete sequence Length = 216040 Score = 42.1 bits (21), Expect = 1.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataaatggaaaat 219 |||||||||| || ||||||||||||||| Sbjct: 74890 aagaaaaactcacaaaataaatggaaaat 74862
>gb|AC147447.3| Gallus gallus BAC clone CH261-9P3 from chromosome unknown, complete sequence Length = 162933 Score = 42.1 bits (21), Expect = 1.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 205 aaataaatggaaaatgaaaat 225 ||||||||||||||||||||| Sbjct: 29571 aaataaatggaaaatgaaaat 29551
>gb|AY521596.1| Cucumis sativus isolate GY-14, chloroplast sequence Length = 16653 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 2757 gtcagcaaagttgtttcttt 2776
>gb|CP000067.1| Trypanosoma brucei chromosome 4, complete sequence Length = 1590432 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 tatgtttatatttcaatataccgaaacc 73 ||||||||||| ||||||||||| |||| Sbjct: 574495 tatgtttatatatcaatataccgcaacc 574468
>gb|AC145325.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0034E03 map near 50283S, complete sequence Length = 134074 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 133934 aagaaaaactaactaaataa 133953
>gb|AC146946.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0037B06 map near 50283S, complete sequence Length = 149398 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 51402 aagaaaaactaactaaataa 51421 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 43262 aagaaaaactaactaaataa 43281
>gb|AC079933.3| Trypanosoma brucei chromosome 4 clone RPCI93-1H19, complete sequence Length = 171392 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 46 tatgtttatatttcaatataccgaaacc 73 ||||||||||| ||||||||||| |||| Sbjct: 26992 tatgtttatatatcaatataccgcaacc 26965
>gb|AC154861.2| Mus musculus BAC clone RP23-8E13 from chromosome 14, complete sequence Length = 209896 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 51316 ttgtttctttatttatattt 51297
>gb|AC146147.3| Pan troglodytes BAC clone RP43-2J16 from 7, complete sequence Length = 167352 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 atttcattaagaaaaactaa 202 |||||||||||||||||||| Sbjct: 80097 atttcattaagaaaaactaa 80078
>gb|AC127588.3| Mus musculus BAC clone RP23-106G21 from chromosome 18, complete sequence Length = 180320 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 aaactaactaaataaatggaaaat 219 ||||||||||||||||| |||||| Sbjct: 168390 aaactaactaaataaattgaaaat 168367
>gb|DQ345959.1| Gossypium hirsutum cultivar coker 310 FR chloroplast, complete genome Length = 160301 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 12716 gtcagcaaagttgtttcttt 12735
>gb|AC158951.5| Mus musculus chromosome 8, clone RP23-265B11, complete sequence Length = 191700 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tattttttatgtttatattt 58 |||||||||||||||||||| Sbjct: 189780 tattttttatgtttatattt 189761
>gb|AF483658.1| Zea mays subsp. mays b1 gene, b1-B-Peru allele, genomic sequence Length = 9163 Score = 40.1 bits (20), Expect = 4.5 Identities = 29/32 (90%) Strand = Plus / Plus Query: 34 tatcttattttttatgtttatatttcaatata 65 |||||||||||||||| |||||| | |||||| Sbjct: 4055 tatcttattttttatggttatatatgaatata 4086
>gb|AC158364.4| Mus musculus BAC clone RP23-187J8 from chromosome 8, complete sequence Length = 208153 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gaaaaactaactaaataaat 212 |||||||||||||||||||| Sbjct: 112734 gaaaaactaactaaataaat 112715
>gb|AC116111.17| Mus musculus chromosome 10, clone RP23-23B18, complete sequence Length = 211888 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatg 213 |||||||||||||||||||| Sbjct: 89656 aaaaactaactaaataaatg 89675
>gb|DQ420216.1| Uncultured bacterium site7S multiple resistance protein-like (marA) gene, partial sequence Length = 283 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 aagtaatgagcctatcctctatct 38 |||||||||||| ||||||||||| Sbjct: 98 aagtaatgagccgatcctctatct 75
>gb|DQ383816.1| Lactuca sativa cultivar Salinas chloroplast, complete genome Length = 152772 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctat 36 |||||||||||||||||||| Sbjct: 27683 gtaatgagcctatcctctat 27664
>emb|CR974460.5| Pig DNA sequence from clone PigE-150I6 on chromosome 7, complete sequence Length = 122162 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 200 taactaaataaatggaaaatgaaa 223 |||||||||||| ||||||||||| Sbjct: 53988 taactaaataaagggaaaatgaaa 54011
>gb|AC099710.8| Mus musculus, clone RP23-366C6, complete sequence Length = 225122 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 173 aataatttcaatttcattaa 192 |||||||||||||||||||| Sbjct: 81834 aataatttcaatttcattaa 81853
>emb|CR318599.18| Zebrafish DNA sequence from clone DKEY-28D5 in linkage group 22, complete sequence Length = 222575 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 ttttttatgtttatatttca 60 |||||||||||||||||||| Sbjct: 101865 ttttttatgtttatatttca 101884
>gb|DQ383815.1| Helianthus annuus cultivar line HA383 chloroplast, complete genome Length = 151104 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctat 36 |||||||||||||||||||| Sbjct: 27785 gtaatgagcctatcctctat 27766
>emb|CR536601.8| Platypus DNA sequence from clone XX-307A9, complete sequence Length = 191674 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 198 actaactaaataaatggaaaatga 221 |||||| ||||||||||||||||| Sbjct: 186395 actaacaaaataaatggaaaatga 186372
>gb|AC122304.4| Mus musculus BAC clone RP23-283G11 from 18, complete sequence Length = 184090 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 196 aaactaactaaataaatggaaaat 219 ||||||||||||||||| |||||| Sbjct: 28304 aaactaactaaataaattgaaaat 28281
>gb|AC125353.2| Mus musculus BAC clone RP23-455B17 from 6, complete sequence Length = 171963 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttttatgtttatatttcaat 62 |||||||||||||||||||| Sbjct: 116461 ttttatgtttatatttcaat 116480
>gb|AC121972.2| Mus musculus BAC clone RP24-276H18 from 2, complete sequence Length = 193641 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 200 taactaaataaatggaaaat 219 |||||||||||||||||||| Sbjct: 34516 taactaaataaatggaaaat 34535
>gb|AC107864.10| Mus musculus chromosome 10, clone RP23-388A14, complete sequence Length = 207955 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatg 213 |||||||||||||||||||| Sbjct: 191596 aaaaactaactaaataaatg 191615
>ref|XM_719357.1| Plasmodium yoelii yoelii str. 17XNL 26S proteasome regulatory subunit s5a (PY04193) partial mRNA Length = 1386 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 141 gttgtttctttatttatatt 160 |||||||||||||||||||| Sbjct: 1166 gttgtttctttatttatatt 1147
>ref|XM_719563.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY04371) partial mRNA Length = 1923 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 1639 ttgtttctttatttatattt 1620
>gb|AC113976.13| Mus musculus chromosome 15, clone RP23-146F23, complete sequence Length = 184010 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttttatgtttatatttcaat 62 |||||||||||||||||||| Sbjct: 140690 ttttatgtttatatttcaat 140709
>gb|AC004594.2| Homo sapiens PAC clone RP5-1101C3 from 7, complete sequence Length = 151874 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 183 atttcattaagaaaaactaa 202 |||||||||||||||||||| Sbjct: 32538 atttcattaagaaaaactaa 32519
>gb|AC120122.10| Mus musculus chromosome 10, clone RP23-75O24, complete sequence Length = 144972 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 aataaatggaaaatgaaaat 225 |||||||||||||||||||| Sbjct: 25564 aataaatggaaaatgaaaat 25545
>gb|AC113292.6| Mus musculus chromosome 15, clone RP23-418M3, complete sequence Length = 218109 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 43 ttttatgtttatatttcaat 62 |||||||||||||||||||| Sbjct: 135143 ttttatgtttatatttcaat 135162
>ref|XM_672754.1| Plasmodium berghei strain ANKA hypothetical protein (PB000282.03.0) partial mRNA Length = 1269 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 1129 ttgtttctttatttatattt 1110
>gb|AF317907.1| Arabidopsis thaliana BABY BOOM (BBM) gene, complete cds Length = 5151 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 205 aaataaatggaaaatgaaaattaa 228 |||||||||| ||||||||||||| Sbjct: 3352 aaataaatggtaaatgaaaattaa 3329
>gb|AC170737.3| Sorex araneus clone SA_Ba-480N17, complete sequence Length = 173928 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 39 tattttttatgtttatattt 58 |||||||||||||||||||| Sbjct: 27708 tattttttatgtttatattt 27689
>gb|AC115747.8| Mus musculus chromosome 10, clone RP23-8P5, complete sequence Length = 193706 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 206 aataaatggaaaatgaaaat 225 |||||||||||||||||||| Sbjct: 8467 aataaatggaaaatgaaaat 8486
>gb|AC149493.7| Medicago truncatula clone mth2-116k17, complete sequence Length = 105229 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 taaataaatggaaaatgaaaatta 227 |||||||||| ||||||||||||| Sbjct: 100759 taaataaatgaaaaatgaaaatta 100736
>emb|CR361556.8| Zebrafish DNA sequence from clone DKEY-97G1 in linkage group 24, complete sequence Length = 106934 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatg 213 |||||||||||||||||||| Sbjct: 78106 aaaaactaactaaataaatg 78125
>gb|AY865171.1| Lactuca sativa chloroplast inversion region Length = 28722 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 17 gtaatgagcctatcctctat 36 |||||||||||||||||||| Sbjct: 21621 gtaatgagcctatcctctat 21602
>emb|AJ970307.1| Cucumis sativus chloroplast complete genome Length = 155293 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 13354 gtcagcaaagttgtttcttt 13373
>gb|DQ437398.1| Borrelia burgdorferi strain CS9 hypothetical protein (BBJ18) gene, partial cds Length = 591 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 97 ttgtttctttatttatattt 78
>gb|DQ437395.1| Borrelia burgdorferi strain CS6 hypothetical protein (BBJ18) gene, partial cds Length = 591 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 97 ttgtttctttatttatattt 78
>gb|DQ437389.1| Borrelia burgdorferi strain 297 hypothetical protein (BBJ18) gene, partial cds Length = 588 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 94 ttgtttctttatttatattt 75
>emb|Z83850.1|HS82J11 Human DNA sequence from clone RP1-82J11 on chromosome Xq22, complete sequence Length = 132981 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Minus Query: 205 aaataaatggaaaatgaaaattaataga 232 ||||||||||||||| |||| ||||||| Sbjct: 12623 aaataaatggaaaataaaaaataataga 12596
>emb|AL592466.9| Human DNA sequence from clone RP11-428G2 on chromosome 10 Contains a novel gene, complete sequence Length = 113271 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 208 taaatggaaaatgaaaatta 227 |||||||||||||||||||| Sbjct: 93514 taaatggaaaatgaaaatta 93495
>emb|AL590439.12| Human DNA sequence from clone RP11-394I23 on chromosome 10 Contains a novel gene (FLJ13397) (CARP) and a CpG island, complete sequence Length = 192044 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 taaataaatggaaaatgaaa 223 |||||||||||||||||||| Sbjct: 169778 taaataaatggaaaatgaaa 169759
>emb|AL442064.10| Human DNA sequence from clone RP11-272D1 on chromosome 9 Contains the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 169905 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 ttaagaaaaactaactaaataaatggaa 216 |||||||||| || |||||||||||||| Sbjct: 40662 ttaagaaaaaatacctaaataaatggaa 40689
>gb|AC108781.9| Mus musculus, clone RP23-304K14, complete sequence Length = 183718 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 158449 ttattttttatgtttatatt 158468
>emb|AL353667.10| Human DNA sequence from clone RP11-125B21 on chromosome 9p24.1-24.3 Contains the 3' end of a novel gene (FLJ35024), complete sequence Length = 168366 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 ataaatggaaaatgaaaattaata 230 |||||||||||||| ||||||||| Sbjct: 83564 ataaatggaaaatgcaaattaata 83541
>emb|AL157881.14| Human DNA sequence from clone RP11-104M22 on chromosome 9q31.1-32 Contains the 3' end of the MUSK gene for muscle, skeletal, receptor tyrosine kinase and the 3' end of the EDG2 gene for endothelial differentiation, lysophosphatidic acid G-protein-coupled receptor, 2, complete sequence Length = 162726 Score = 40.1 bits (20), Expect = 4.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 189 ttaagaaaaactaactaaataaatggaa 216 |||||||||| || |||||||||||||| Sbjct: 124040 ttaagaaaaaatacctaaataaatggaa 124067
>emb|AL023095.1|HS1059E7 Human DNA sequence from clone RP5-1059E7 on chromosome Xq22.1-22.3 Contains part of the DACH2 gene for dachshund homolog 2 (Drosophila) and a chromosome 14 open reading frame 111 (C14orf111) pseudogene, complete sequence Length = 112585 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 204 taaataaatggaaaatgaaa 223 |||||||||||||||||||| Sbjct: 27208 taaataaatggaaaatgaaa 27189
>emb|AL391142.1|ATT10B6 Arabidopsis thaliana DNA chromosome 5, BAC clone T10B6 (ESSA project) Length = 33563 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 205 aaataaatggaaaatgaaaattaa 228 |||||||||| ||||||||||||| Sbjct: 28037 aaataaatggtaaatgaaaattaa 28060
>emb|AL117183.1|SPCP1E11 S.pombe chromosome III p1 clone p1E11 Length = 25057 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tttcaatttcattaagaaaa 197 |||||||||||||||||||| Sbjct: 20919 tttcaatttcattaagaaaa 20938
>emb|AL031745.8|PFMAL1P2 Plasmodium falciparum DNA from MAL1P2 Length = 384550 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 34 tatcttattttttatgtttatatt 57 ||||||||||||||| |||||||| Sbjct: 371417 tatcttattttttatatttatatt 371394
>gb|AC171134.2| Helobdella robusta clone CH306-1A5, complete sequence Length = 95814 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 207 ataaatggaaaatgaaaatt 226 |||||||||||||||||||| Sbjct: 15932 ataaatggaaaatgaaaatt 15913
>emb|CR407560.11| Zebrafish DNA sequence from clone CH211-180L14, complete sequence Length = 127482 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 95826 ttgtttctttatttatattt 95845
>emb|AL691494.15| Mouse DNA sequence from clone RP23-294J14 on chromosome 11 Contains the 5' end of the Hlf gene for hepatic leukemia factor, complete sequence Length = 57014 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 atggaaaatgaaaattaata 230 |||||||||||||||||||| Sbjct: 29660 atggaaaatgaaaattaata 29641
>emb|AL589737.11| Mouse DNA sequence from clone RP23-43L14 on chromosome 13, complete sequence Length = 202855 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 100829 ttattttttatgtttatatt 100810
>emb|BX548022.6| Zebrafish DNA sequence from clone DKEY-108E7 in linkage group 24, complete sequence Length = 133412 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 194 aaaaactaactaaataaatg 213 |||||||||||||||||||| Sbjct: 120714 aaaaactaactaaataaatg 120733
>gb|AC093298.3| Homo sapiens chromosome 5 clone RP11-543L14, complete sequence Length = 198687 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 53489 ttgtttctttatttatattt 53470
>gb|AC015914.8| Homo sapiens chromosome 15, clone RP11-111E14, complete sequence Length = 170078 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataaatgg 214 ||||| |||||||||||||||||| Sbjct: 113852 aagaataactaactaaataaatgg 113829
>gb|DQ205649.1| Phaseolus vulgaris DNA mismatch repair protein (Msh1) gene, complete cds Length = 22288 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 172 taataatttcaatttcatta 191 |||||||||||||||||||| Sbjct: 2326 taataatttcaatttcatta 2307
>emb|AJ506064.1|ACA506064 Acer campestre chloroplast partial atpF gene intron, isolate 23 AC 03 Length = 76 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 31 gtcagcaaagttgtttcttt 50
>gb|AC135464.13| Medicago truncatula clone mth2-17k21, complete sequence Length = 105376 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 63466 ttgtttctttatttatattt 63447
>gb|AC108082.3| Homo sapiens chromosome 5 clone CTD-2011G17, complete sequence Length = 114475 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tattttttatgtttatattt 58 |||||||||||||||||||| Sbjct: 21018 tattttttatgtttatattt 21037
>gb|AY696444.1| Borrelia burgdorferi strain JD1 plasmid lp38 hypothetical protein (BBJ18) gene, partial cds Length = 588 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 94 ttgtttctttatttatattt 75
>gb|AY696431.1| Borrelia burgdorferi strain 118a plasmid lp38 hypothetical protein (BBJ18) gene, partial cds Length = 594 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 100 ttgtttctttatttatattt 81
>gb|AC109630.2| Homo sapiens chromosome 15, clone RP11-624L4, complete sequence Length = 163976 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 29 tcctctatcttattttttat 48 |||||||||||||||||||| Sbjct: 89061 tcctctatcttattttttat 89080
>gb|DQ389127.1| Cannabis sativa voucher CPRO 921231 SSR marker ccmp4 sequence; chloroplast Length = 119 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 78 gtcagcaaagttgtttcttt 59
>gb|DQ389126.1| Cannabis sativa voucher CPRO 883270 SSR marker ccmp4 sequence; chloroplast Length = 119 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 78 gtcagcaaagttgtttcttt 59
>gb|DQ389125.1| Cannabis sativa voucher CPRO 883247 SSR marker ccmp4 sequence; chloroplast Length = 121 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 80 gtcagcaaagttgtttcttt 61
>dbj|AK142194.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched library, clone:D330008M24 product:hypothetical protein, full insert sequence Length = 3991 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 989 ttgtttctttatttatattt 1008
>gb|CP000237.1| Neorickettsia sennetsu strain Miyayama, complete genome Length = 859006 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 188 attaagaaaaactaactaaataaa 211 |||||||||||||||| ||||||| Sbjct: 420412 attaagaaaaactaacgaaataaa 420435
>gb|AC008709.6| Homo sapiens chromosome 5 clone CTB-78O4, complete sequence Length = 114421 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ctaaataaatggaaaatgaa 222 |||||||||||||||||||| Sbjct: 105211 ctaaataaatggaaaatgaa 105192
>gb|AC010275.6| Homo sapiens chromosome 5 clone CTC-499J9, complete sequence Length = 197255 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ctaaataaatggaaaatgaa 222 |||||||||||||||||||| Sbjct: 13069 ctaaataaatggaaaatgaa 13088
>gb|AC154881.6| Mus musculus chromosome 15, clone RP24-259H19, complete sequence Length = 180231 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 tcttattttttatgtttatatttc 59 ||||||||||||| |||||||||| Sbjct: 91554 tcttattttttatttttatatttc 91577
>gb|AC156501.3| Mus musculus BAC clone RP23-358M3 from chromosome 14, complete sequence Length = 195115 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 69513 ttattttttatgtttatatt 69494
>gb|AC159004.5| Mus musculus BAC clone RP23-168H21 from chromosome 15, complete sequence Length = 217298 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 atcttattttttatgtttat 54 |||||||||||||||||||| Sbjct: 123520 atcttattttttatgtttat 123539
>emb|BX640536.6| Zebrafish DNA sequence from clone CH211-191A6 in linkage group 5, complete sequence Length = 137923 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 110729 ttgtttctttatttatattt 110710
>gb|AC008353.4|AC008353 Drosophila melanogaster, chromosome 2R, region 60C-60C, BAC clone BACR02A05, complete sequence Length = 172826 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatgaaaattaatagaatt 235 |||||||||||||||||||| Sbjct: 94999 aaatgaaaattaatagaatt 94980
>dbj|AK037651.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130033G06 product:hypothetical AAA-protein subfamily/P-loop containing nucleotide triphosphate hydrolases structure containing protein, full insert sequence Length = 2827 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 ttttatgtttatatttcaat 62 |||||||||||||||||||| Sbjct: 1727 ttttatgtttatatttcaat 1708
>gb|AC010468.5|AC010468 Homo sapiens chromosome 5 clone CTD-2290C20, complete sequence Length = 122102 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 203 ctaaataaatggaaaatgaa 222 |||||||||||||||||||| Sbjct: 8809 ctaaataaatggaaaatgaa 8790
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 14693022 aagaaaaactaactaaataa 14693003 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 14684882 aagaaaaactaactaaataa 14684863
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 17781744 aagaaaaactaactaaataa 17781725
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 14068183 aagaaaaactaactaaataa 14068202 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 6939060 aagaaaaactaactaaataa 6939079
>gb|AC104840.2| Homo sapiens BAC clone RP11-10E9 from 4, complete sequence Length = 159946 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 171 ttaataatttcaatttcatt 190 |||||||||||||||||||| Sbjct: 5650 ttaataatttcaatttcatt 5669
>gb|DQ231548.1| Brassica rapa subsp. pekinensis chloroplast sequence Length = 153482 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 11889 gtcagcaaagttgtttcttt 11908
>gb|AC016761.10| Homo sapiens BAC clone RP11-538A12 from 2, complete sequence Length = 159338 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 36851 ttattttttatgtttatatt 36870
>gb|AC130814.3| Homo sapiens BAC clone RP11-599B8 from 2, complete sequence Length = 129660 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 attttttatgtttatatttcaata 63 ||||||||| |||||||||||||| Sbjct: 127765 attttttatttttatatttcaata 127788
>gb|AC155320.2| Pan troglodytes BAC clone CH251-421K1 from chromosome unknown, complete sequence Length = 185966 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 171940 ttattttttatgtttatatt 171959
>gb|AC004617.2|AC004617 Homo sapiens chromosome Y, clone 264,M,20, complete sequence Length = 175223 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 41280 ttgtttctttatttatattt 41261
>gb|AC069275.3|AC069275 Homo sapiens chromosome 3 clone RP11-194C9 map 3p, complete sequence Length = 151142 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 taagaaaaactaactaaataaatg 213 ||||||||| |||||||||||||| Sbjct: 118186 taagaaaaaataactaaataaatg 118163
>gb|AC023472.4|AC023472 Homo sapiens chromosome 3 clone RP11-156B21 map 3p, complete sequence Length = 167220 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 190 taagaaaaactaactaaataaatg 213 ||||||||| |||||||||||||| Sbjct: 81471 taagaaaaaataactaaataaatg 81448
>gb|AC009161.14| Homo sapiens chromosome 16 clone RP11-75D3, complete sequence Length = 180222 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatt 57 |||||||||||||||||||| Sbjct: 101501 ttattttttatgtttatatt 101520
>ref|XM_235049.3| PREDICTED: Rattus norvegicus PCTAIRE-motif protein kinase 2 (Pctk2), mRNA Length = 3371 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 ataaatggaaaatgaaaatt 226 |||||||||||||||||||| Sbjct: 3058 ataaatggaaaatgaaaatt 3077
>gb|AC092594.2| Homo sapiens BAC clone RP11-78J22 from 2, complete sequence Length = 159471 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 40 attttttatgtttatatttcaata 63 ||||||||| |||||||||||||| Sbjct: 140036 attttttatttttatatttcaata 140059
>dbj|AP002902.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0492F05 Length = 159242 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 106784 aagaaaaactaactaaataa 106803
>dbj|AP002900.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E07 Length = 159440 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 60878 aagaaaaactaactaaataa 60897
>dbj|AP004675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0709D11 Length = 146856 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 3250 aagaaaaactaactaaataa 3231
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0438E12 Length = 146851 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 8302 aagaaaaactaactaaataa 8321
>dbj|AP003258.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0463A02 Length = 151041 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 143928 aagaaaaactaactaaataa 143947
>dbj|AP004745.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0001B01 Length = 147585 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 141293 aagaaaaactaactaaataa 141312
>dbj|AP003369.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1102E12 Length = 155692 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 7897 aagaaaaactaactaaataa 7916
>dbj|AP003545.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0613F06 Length = 184289 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 37382 aagaaaaactaactaaataa 37401
>emb|BX005163.13| Mouse DNA sequence from clone RP23-408E16 on chromosome X, complete sequence Length = 188605 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tattttttatgtttatattt 58 |||||||||||||||||||| Sbjct: 72562 tattttttatgtttatattt 72581
>gb|AC117729.9| Mus musculus chromosome 8, clone RP24-126M11, complete sequence Length = 193119 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tattttttatgtttatattt 58 |||||||||||||||||||| Sbjct: 85970 tattttttatgtttatattt 85989
>dbj|AB110067.1| Vincetoxicum inamoenum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109074.1| Vincetoxicum hoyoense chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109073.1| Vincetoxicum izuense chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109072.1| Vincetoxicum yonakuniense chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109071.1| Vincetoxicum yamanakae chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109070.1| Vincetoxicum sublanceolatum var. macranthum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109069.1| Vincetoxicum sublanceolatum var. sublanceolatum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109068.1| Vincetoxicum pycnostelma chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109067.1| Vincetoxicum nipponicum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109066.1| Vincetoxicum nipponicum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109065.1| Vincetoxicum magnificum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109064.1| Vincetoxicum macrophyllum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109063.1| Vincetoxicum macrophyllum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109062.1| Vincetoxicum katoi chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109061.1| Vincetoxicum japonicum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109060.1| Vincetoxicum calcareum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109059.1| Vincetoxicum austrokiusianum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109058.1| Vincetoxicum atratum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109057.1| Vincetoxicum amplexicaule chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109056.1| Vincetoxicum ambiguum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109055.1| Vincetoxicum acuminatum chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109054.1| Tylophora tanakae chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109053.1| Tylophora ovata var. ovata chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109052.1| Tylophora ovata var. brownii chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109051.1| Tylophora matsumurae chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109050.1| Tylophora japonica chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109049.1| Tylophora floribunda chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109048.1| Tylophora brownii chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109047.1| Tylophora aristolochioides chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109046.1| Cynanchum wilfordii chloroplast atpF gene, intron region, partial sequence Length = 188 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 131 aaaaatatgtaattgtcaacaaagttgtttctttttttat 170
>dbj|AB109045.1| Cynanchum caudatum chloroplast atpF gene, intron region, partial sequence Length = 200 Score = 40.1 bits (20), Expect = 4.5 Identities = 35/40 (87%) Strand = Plus / Plus Query: 118 aaaaatatatcatggtcagcaaagttgtttctttatttat 157 |||||||| | || |||| ||||||||||||||| ||||| Sbjct: 143 aaaaatatgtaattgtcaacaaagttgtttctttttttat 182
>dbj|AP005443.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0011E04 Length = 136767 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 191 aagaaaaactaactaaataa 210 |||||||||||||||||||| Sbjct: 56138 aagaaaaactaactaaataa 56119
>emb|BX936364.6| Zebrafish DNA sequence from clone CH211-247G11 in linkage group 18, complete sequence Length = 146733 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 atggaaaatgaaaattaata 230 |||||||||||||||||||| Sbjct: 45629 atggaaaatgaaaattaata 45648
>gb|AE003464.2| Drosophila melanogaster chromosome 2R, section 71 of 73 of the complete sequence Length = 310958 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatgaaaattaatagaatt 235 |||||||||||||||||||| Sbjct: 50177 aaatgaaaattaatagaatt 50158
>emb|AL049839.3|CNS0000J Human chromosome 14 DNA sequence BAC R-986E7 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 214527 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 gaaaaactaactaaataaat 212 |||||||||||||||||||| Sbjct: 181308 gaaaaactaactaaataaat 181289
>dbj|AP002778.3| Homo sapiens genomic DNA, chromosome 11 clone:RP11-643C11, complete sequence Length = 160242 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 aaatgaaaattaatagaatt 235 |||||||||||||||||||| Sbjct: 108078 aaatgaaaattaatagaatt 108059
>gb|AC164569.3| Gallus gallus BAC clone CH261-138K23 from chromosome unknown, complete sequence Length = 248284 Score = 40.1 bits (20), Expect = 4.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 ttattttttatgtttatatttcaa 61 ||||||||||||||||| |||||| Sbjct: 130396 ttattttttatgtttatttttcaa 130419
>emb|CT572983.7| Mouse DNA sequence from clone RP23-110N1 on chromosome 14, complete sequence Length = 218673 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 ttgtttctttatttatattt 161 |||||||||||||||||||| Sbjct: 58030 ttgtttctttatttatattt 58049
>gb|DQ119058.1| Cucumis sativus cultivar Baekmibaekdadagi plastid, complete genome Length = 155527 Score = 40.1 bits (20), Expect = 4.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 132 gtcagcaaagttgtttcttt 151 |||||||||||||||||||| Sbjct: 13347 gtcagcaaagttgtttcttt 13366 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,327,766 Number of Sequences: 3902068 Number of extensions: 5327766 Number of successful extensions: 159074 Number of sequences better than 10.0: 267 Number of HSP's better than 10.0 without gapping: 274 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 157118 Number of HSP's gapped (non-prelim): 1946 length of query: 340 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 318 effective length of database: 17,147,199,772 effective search space: 5452809527496 effective search space used: 5452809527496 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
