Clone Name | rbasd13d14 |
---|---|
Clone Library Name | barley_pub |
>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA, complete cds Length = 1816 Score = 349 bits (176), Expect = 8e-93 Identities = 518/630 (82%), Gaps = 4/630 (0%) Strand = Plus / Minus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| ||||||||||||||||| ||||| || || || |||| Sbjct: 1477 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1418 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 1417 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1358 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 1357 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1298 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 1297 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1238 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||||| || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 1237 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1178 Query: 386 gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445 || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || Sbjct: 1177 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1118 Query: 446 agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505 |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| Sbjct: 1117 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1058 Query: 506 gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563 ||||||||| |||| || || ||| | |||||||| |||||||| | | ||||||| Sbjct: 1057 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 1000 Query: 564 gaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttcaaagatct 623 ||||||||| ||| || || || || ||||||||||| ||||| || || || ||||||| Sbjct: 999 gaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcgaagatct 940 Query: 624 gctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaaggc 683 |||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| | Sbjct: 939 gctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaagac 880 Query: 684 atgaagaagagaagttaccccattcggtat 713 | || || ||||||||||||||||| |||| Sbjct: 879 aggatgaggagaagttaccccattctgtat 850
>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA, complete cds Length = 1652 Score = 349 bits (176), Expect = 8e-93 Identities = 518/630 (82%), Gaps = 4/630 (0%) Strand = Plus / Minus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| ||||||||||||||||| ||||| || || || |||| Sbjct: 1467 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1408 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 1407 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1348 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 1347 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1288 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 1287 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1228 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||||| || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 1227 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1168 Query: 386 gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445 || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || Sbjct: 1167 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1108 Query: 446 agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505 |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| Sbjct: 1107 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1048 Query: 506 gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563 ||||||||| |||| || || ||| | |||||||| |||||||| | | ||||||| Sbjct: 1047 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 990 Query: 564 gaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttcaaagatct 623 ||||||||| ||| || || || || ||||||||||| ||||| || || || ||||||| Sbjct: 989 gaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcgaagatct 930 Query: 624 gctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaaggc 683 |||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| | Sbjct: 929 gctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaagac 870 Query: 684 atgaagaagagaagttaccccattcggtat 713 | || || ||||||||||||||||| |||| Sbjct: 869 aggatgaggagaagttaccccattctgtat 840
>ref|XM_476073.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1632 Score = 272 bits (137), Expect = 1e-69 Identities = 428/523 (81%), Gaps = 4/523 (0%) Strand = Plus / Minus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| ||||||||||||||||| ||||| || || || |||| Sbjct: 1625 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1566 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 1565 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1506 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 1505 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1446 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 1445 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1386 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||||| || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 1385 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1326 Query: 386 gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445 || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || Sbjct: 1325 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1266 Query: 446 agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505 |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| Sbjct: 1265 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1206 Query: 506 gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563 ||||||||| |||| || || ||| | |||||||| |||||||| | | ||||||| Sbjct: 1205 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 1148 Query: 564 gaagcactcgcctcacaatgtcgccaagatacattccagaaat 606 ||||||||| ||| || || || || ||||||||||| ||||| Sbjct: 1147 gaagcactctccttacgatttcacctagatacattcctgaaat 1105 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Minus Query: 622 ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681 |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| Sbjct: 1047 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 988 Query: 682 gcatgaagaagagaagttaccccattcggtat 713 || || || ||||||||||||||||| |||| Sbjct: 987 acaggatgaggagaagttaccccattctgtat 956
>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full insert sequence Length = 1777 Score = 184 bits (93), Expect = 3e-43 Identities = 255/307 (83%), Gaps = 4/307 (1%) Strand = Plus / Minus Query: 409 cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468 ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| || Sbjct: 1190 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 1131 Query: 469 catcgcggaaatatcaggagtcctcagaatcaagcgagttttgagcctggtgtg--cttg 526 |||| ||||||||||||||||||||||||| ||||| ||||||||| |||| || || | Sbjct: 1130 catcacggaaatatcaggagtcctcagaataaagcgggttttgagcttggtctgatctag 1071 Query: 527 atgggaccaaaaatcgaagactgtgaggcgattttaagaagcactcgcctcacaatgtcg 586 || | |||||||| |||||||| | | |||||||||||||||| ||| || || || Sbjct: 1070 attg--ccaaaaattgaagactgcaaagatattttaagaagcactctccttacgatttca 1013 Query: 587 ccaagatacattccagaaattaacttttcaaagatctgctctctaggatttaggctctcc 646 || ||||||||||| ||||| || || || ||||||||||||| ||| |||| |||||| Sbjct: 1012 cctagatacattcctgaaatcaatttctcgaagatctgctctccagggtttaagctctct 953 Query: 647 ttgtctaatgcttgatcatattctgtgattggaaggcatgaagaagagaagttaccccat 706 || |||| ||||| |||||||||||| |||||||| || || || ||||||||||||||| Sbjct: 952 ttatctagtgcttcatcatattctgttattggaagacaggatgaggagaagttaccccat 893 Query: 707 tcggtat 713 || |||| Sbjct: 892 tctgtat 886 Score = 153 bits (77), Expect = 9e-34 Identities = 263/325 (80%) Strand = Plus / Minus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| |||||||| |||||||| ||||| || || || |||| Sbjct: 1610 aggtactgagaatgagcagctgcaatcagtgcagctccaaggccagacccgtcgtttgca 1551 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 1550 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1491 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 1490 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1431 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 1430 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1371 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||| | || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 1370 gcagccagccggtctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1311 Query: 386 gtctccaaggacgtgtctttgatct 410 || || ||||| |||||| |||||| Sbjct: 1310 gtttctaaggatgtgtctgtgatct 1286
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 168 bits (85), Expect = 2e-38 Identities = 265/325 (81%) Strand = Plus / Plus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| ||||||||||||||||| ||||| || || || |||| Sbjct: 5281112 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 5281171 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 5281172 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 5281231 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 5281232 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 5281291 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 5281292 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 5281351 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||||| || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 5281352 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 5281411 Query: 386 gtctccaaggacgtgtctttgatct 410 || || ||||| |||||| |||||| Sbjct: 5281412 gtttctaaggatgtgtctgtgatct 5281436 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 622 ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681 |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| Sbjct: 5282071 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 5282130 Query: 682 gcatgaagaagagaagttaccccattcggtat 713 || || || ||||||||||||||||| |||| Sbjct: 5282131 acaggatgaggagaagttaccccattctgtat 5282162 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 409 cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468 ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| || Sbjct: 5281532 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 5281591 Query: 469 catcgcggaaatatcaggagtcct 492 |||| ||||||||||||||||||| Sbjct: 5281592 catcacggaaatatcaggagtcct 5281615 Score = 48.1 bits (24), Expect = 0.040 Identities = 57/68 (83%) Strand = Plus / Plus Query: 557 attttaagaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttca 616 |||||||||||||||| ||| || || || || ||||||||||| ||||| || || || Sbjct: 5281899 attttaagaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcg 5281958 Query: 617 aagatctg 624 |||||||| Sbjct: 5281959 aagatctg 5281966 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttca 616 ||||||||||| |||||||| ||||||||| Sbjct: 25820491 ccaagatacatgccagaaatcaacttttca 25820462
>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12, complete sequence Length = 88725 Score = 168 bits (85), Expect = 2e-38 Identities = 265/325 (81%) Strand = Plus / Plus Query: 86 aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145 ||||||||||| |||||||| ||||||||||||||||| ||||| || || || |||| Sbjct: 17813 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 17872 Query: 146 agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205 |||||||| || || ||| ||||||||| || || |||| |||| ||||||| ||||| Sbjct: 17873 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 17932 Query: 206 aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265 |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | | Sbjct: 17933 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 17992 Query: 266 ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325 || | ||||||||||| ||| || || |||||||||| ||||| || |||||||| Sbjct: 17993 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 18052 Query: 326 gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385 |||||||||||||| || || | ||| || ||||| |||||||| || |||||||||| Sbjct: 18053 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 18112 Query: 386 gtctccaaggacgtgtctttgatct 410 || || ||||| |||||| |||||| Sbjct: 18113 gtttctaaggatgtgtctgtgatct 18137 Score = 79.8 bits (40), Expect = 1e-11 Identities = 79/92 (85%) Strand = Plus / Plus Query: 622 ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681 |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| Sbjct: 18772 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 18831 Query: 682 gcatgaagaagagaagttaccccattcggtat 713 || || || ||||||||||||||||| |||| Sbjct: 18832 acaggatgaggagaagttaccccattctgtat 18863 Score = 71.9 bits (36), Expect = 3e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 409 cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468 ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| || Sbjct: 18233 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 18292 Query: 469 catcgcggaaatatcaggagtcct 492 |||| ||||||||||||||||||| Sbjct: 18293 catcacggaaatatcaggagtcct 18316 Score = 48.1 bits (24), Expect = 0.040 Identities = 57/68 (83%) Strand = Plus / Plus Query: 557 attttaagaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttca 616 |||||||||||||||| ||| || || || || ||||||||||| ||||| || || || Sbjct: 18600 attttaagaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcg 18659 Query: 617 aagatctg 624 |||||||| Sbjct: 18660 aagatctg 18667
>ref|NM_187061.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1497 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 1416 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1357 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 1356 gccgtagtgctcgaacagcccgccgtc 1330
>gb|DQ116383.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA, complete cds Length = 1626 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 1451 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1392 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 1391 gccgtagtgctcgaacagcccgccgtc 1365
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 15241051 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 15240992 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 15240991 gccgtagtgctcgaacagcccgccgtc 15240965
>gb|AY884164.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA, complete cds Length = 1584 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 1475 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1416 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 1415 gccgtagtgctcgaacagcccgccgtc 1389
>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0475E07 Length = 139961 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 27064 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 27005 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 27004 gccgtagtgctcgaacagcccgccgtc 26978
>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0030H06 Length = 147890 Score = 69.9 bits (35), Expect = 1e-08 Identities = 74/87 (85%) Strand = Plus / Minus Query: 163 ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222 ||||| |||| |||| || ||||||||| || || |||||||| |||| |||||||||| Sbjct: 107800 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 107741 Query: 223 ggcgtaatgctcaaacagcccgccgtc 249 | |||| ||||| |||||||||||||| Sbjct: 107740 gccgtagtgctcgaacagcccgccgtc 107714
>gb|BT018960.1| Zea mays clone Contig259.F mRNA sequence Length = 599 Score = 65.9 bits (33), Expect = 2e-07 Identities = 81/97 (83%) Strand = Plus / Minus Query: 167 gacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaacttggcg 226 |||||||| || || |||||||| |||| ||| |||||| |||| | ||||| |||| | Sbjct: 140 gacgcctcgtctcctagcagctcacccagtgtggtctccaagcaccggcggaatttggtg 81 Query: 227 taatgctcaaacagcccgccgtcgatggcgatgactg 263 || ||||| ||||| || ||||||||||||||||||| Sbjct: 80 tagtgctcgaacagtcctccgtcgatggcgatgactg 44
>ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1800 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651 ||||||||| || ||||||| ||| | |||||||||| ||| |||| ||| |||||||| Sbjct: 1296 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1237 Query: 652 taatgcttgatcatattc 669 |||||||| ||| ||||| Sbjct: 1236 taatgcttcatcgtattc 1219 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 1439 tcaggtgtttcatcatggtgcattgcagaaat 1408
>gb|DQ116390.1| Oryza sativa (japonica cultivar-group) hexokinase 8 (HXK8) mRNA, complete cds Length = 1835 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651 ||||||||| || ||||||| ||| | |||||||||| ||| |||| ||| |||||||| Sbjct: 1137 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1078 Query: 652 taatgcttgatcatattc 669 |||||||| ||| ||||| Sbjct: 1077 taatgcttcatcgtattc 1060 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 1280 tcaggtgtttcatcatggtgcattgcagaaat 1249
>gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase 5 (HXK5) mRNA, complete cds Length = 2058 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636 ||||||||||| |||||||| ||||||||| | |||||||||| |||||| Sbjct: 1148 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 1099
>gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds Length = 1965 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636 ||||||||||| |||||||| ||||||||| | |||||||||| |||||| Sbjct: 1029 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 980
>gb|AY884167.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA, complete cds Length = 1622 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651 ||||||||| || ||||||| ||| | |||||||||| ||| |||| ||| |||||||| Sbjct: 962 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 903 Query: 652 taatgcttgatcatattc 669 |||||||| ||| ||||| Sbjct: 902 taatgcttcatcgtattc 885 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 1105 tcaggtgtttcatcatggtgcattgcagaaat 1074
>dbj|AK099119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038N14, full insert sequence Length = 1634 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651 ||||||||| || ||||||| ||| | |||||||||| ||| |||| ||| |||||||| Sbjct: 943 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 884 Query: 652 taatgcttgatcatattc 669 |||||||| ||| ||||| Sbjct: 883 taatgcttcatcgtattc 866 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 1086 tcaggtgtttcatcatggtgcattgcagaaat 1055
>dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F14, full insert sequence Length = 2033 Score = 60.0 bits (30), Expect = 1e-05 Identities = 45/50 (90%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636 ||||||||||| |||||||| ||||||||| | |||||||||| |||||| Sbjct: 1138 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 1089
>dbj|AK064011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G12, full insert sequence Length = 1868 Score = 60.0 bits (30), Expect = 1e-05 Identities = 66/78 (84%) Strand = Plus / Minus Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651 ||||||||| || ||||||| ||| | |||||||||| ||| |||| ||| |||||||| Sbjct: 1154 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1095 Query: 652 taatgcttgatcatattc 669 |||||||| ||| ||||| Sbjct: 1094 taatgcttcatcgtattc 1077 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 1297 tcaggtgtttcatcatggtgcattgcagaaat 1266
>gb|AY105705.1| Zea mays PCO123448 mRNA sequence Length = 1993 Score = 52.0 bits (26), Expect = 0.003 Identities = 44/50 (88%) Strand = Plus / Minus Query: 578 acaatgtcgccaagatacattccagaaattaacttttcaaagatctgctc 627 ||||| || |||||||||||||||||||| | ||||||| | |||||||| Sbjct: 963 acaatttctccaagatacattccagaaatcatcttttcatatatctgctc 914
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 622 ctgctctctaggatttaggctctccttgtctaatgcttgatcatattc 669 |||||||| ||| |||| ||| |||||||||||||||| ||| ||||| Sbjct: 4820244 ctgctctccagggtttaagctttccttgtctaatgcttcatcgtattc 4820291 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 4819799 tcaggtgtttcatcatggtgcattgcagaaat 4819830
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 48.1 bits (24), Expect = 0.040 Identities = 42/48 (87%) Strand = Plus / Plus Query: 622 ctgctctctaggatttaggctctccttgtctaatgcttgatcatattc 669 |||||||| ||| |||| ||| |||||||||||||||| ||| ||||| Sbjct: 64893 ctgctctccagggtttaagctttccttgtctaatgcttcatcgtattc 64940 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Plus Query: 449 tcaggggtttcatcatggtgcatcgcggaaat 480 ||||| ||||||||||||||||| || ||||| Sbjct: 64448 tcaggtgtttcatcatggtgcattgcagaaat 64479
>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03, complete sequence Length = 101218 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttca 616 ||||||||||| |||||||| ||||||||| Sbjct: 91785 ccaagatacatgccagaaatcaacttttca 91756
>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10, complete sequence Length = 171101 Score = 44.1 bits (22), Expect = 0.63 Identities = 28/30 (93%) Strand = Plus / Minus Query: 587 ccaagatacattccagaaattaacttttca 616 ||||||||||| |||||||| ||||||||| Sbjct: 54433 ccaagatacatgccagaaatcaacttttca 54404
>ref|XM_542111.2| PREDICTED: Canis familiaris similar to neuropathy target esterase (LOC484993), mRNA Length = 4425 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgtcgatggcgatgactgtctt 267 |||||||||||||||||||||| Sbjct: 3769 cgtcgatggcgatgactgtctt 3748
>gb|BC112748.1| Bos taurus cDNA clone MGC:137670 IMAGE:8168402, complete cds Length = 2994 Score = 44.1 bits (22), Expect = 0.63 Identities = 22/22 (100%) Strand = Plus / Minus Query: 246 cgtcgatggcgatgactgtctt 267 |||||||||||||||||||||| Sbjct: 1919 cgtcgatggcgatgactgtctt 1898
>ref|XM_584666.2| PREDICTED: Bos taurus similar to 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase (LOC507963), partial mRNA Length = 412 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 386 gtctccaaggacgtgtctttg 406 ||||||||||||||||||||| Sbjct: 233 gtctccaaggacgtgtctttg 213
>ref|XM_425787.1| PREDICTED: Gallus gallus similar to ornithine decarboxylase-like protein; ODC-paralog; arginine decarboxylase (LOC428228), mRNA Length = 1266 Score = 42.1 bits (21), Expect = 2.5 Identities = 24/25 (96%) Strand = Plus / Minus Query: 184 cagctccaccagcgtgctctccagg 208 |||||||||||| |||||||||||| Sbjct: 90 cagctccaccagggtgctctccagg 66
>gb|BC060480.1| Xenopus laevis hypothetical protein MGC68729, mRNA (cDNA clone MGC:68729 IMAGE:4057778), complete cds Length = 3376 Score = 42.1 bits (21), Expect = 2.5 Identities = 21/21 (100%) Strand = Plus / Minus Query: 313 cacaatcccagctgcagccag 333 ||||||||||||||||||||| Sbjct: 155 cacaatcccagctgcagccag 135
>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence Length = 166451 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaggtactgagagtgagcag 104 |||||||||||||||||||| Sbjct: 33645 gaggtactgagagtgagcag 33664
>ref|XM_954917.1| Neurospora crassa OR74A hypothetical protein (NCU06148.1) partial mRNA Length = 2316 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tggcgatgactgtcttcctt 271 |||||||||||||||||||| Sbjct: 366 tggcgatgactgtcttcctt 347
>ref|XM_326002.1| Neurospora crassa OR74A hypothetical protein (NCU06148.1) partial mRNA Length = 2316 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 252 tggcgatgactgtcttcctt 271 |||||||||||||||||||| Sbjct: 366 tggcgatgactgtcttcctt 347
>gb|BC068274.1| Homo sapiens cDNA clone IMAGE:5172149, partial cds Length = 1935 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 aatcttcctgattatcccca 314 |||||||||||||||||||| Sbjct: 1745 aatcttcctgattatcccca 1726
>ref|XM_447744.1| Candida glabrata CBS138, CAGL0J00737g partial mRNA Length = 249 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gtacaaagaacagtagaaca 30 |||||||||||||||||||| Sbjct: 194 gtacaaagaacagtagaaca 175
>emb|AL353774.11| Human DNA sequence from clone RP11-267O11 on chromosome 9, complete sequence Length = 118588 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 tctttgaaatgtacaaagaa 20 |||||||||||||||||||| Sbjct: 62933 tctttgaaatgtacaaagaa 62952
>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide synthesis gene cluster, partial sequence Length = 124311 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cagctccaccagcgtgctctccag 207 |||||||||||||| ||||||||| Sbjct: 51676 cagctccaccagcgcgctctccag 51653 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cagctccaccagcgtgctctccag 207 |||||||||||||| ||||||||| Sbjct: 45499 cagctccaccagcgcgctctccag 45476 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cagctccaccagcgtgctctccag 207 |||||||||||||| ||||||||| Sbjct: 37822 cagctccaccagcgcgctctccag 37799 Score = 40.1 bits (20), Expect = 9.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 184 cagctccaccagcgtgctctccag 207 |||||||||||||| ||||||||| Sbjct: 25357 cagctccaccagcgcgctctccag 25334
>emb|CR628337.1| Legionella pneumophila str. Lens complete genome Length = 3345687 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 496 aatcaagcgagttttgagcc 515 |||||||||||||||||||| Sbjct: 2328060 aatcaagcgagttttgagcc 2328041
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 11 gtacaaagaacagtagaaca 30 |||||||||||||||||||| Sbjct: 73776 gtacaaagaacagtagaaca 73757
>gb|BC092496.1| Homo sapiens cDNA clone IMAGE:30346575 Length = 1756 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 aatcttcctgattatcccca 314 |||||||||||||||||||| Sbjct: 1609 aatcttcctgattatcccca 1590
>emb|CR792423.5| Zebrafish DNA sequence from clone CH211-190H10 in linkage group 5, complete sequence Length = 154548 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 aacattacagtcaaataaca 46 |||||||||||||||||||| Sbjct: 99755 aacattacagtcaaataaca 99736
>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete sequence Length = 173991 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 321 cagctgcagccagccgggca 340 |||||||||||||||||||| Sbjct: 57081 cagctgcagccagccgggca 57062
>gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence Length = 176040 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 tagaacattacagtcaaataacaacagt 51 |||||||| | ||||||||||||||||| Sbjct: 102084 tagaacatgaaagtcaaataacaacagt 102111
>gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, complete sequence Length = 207418 Score = 40.1 bits (20), Expect = 9.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 24 tagaacattacagtcaaataacaacagt 51 |||||||| | ||||||||||||||||| Sbjct: 82968 tagaacatgaaagtcaaataacaacagt 82995
>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence Length = 220077 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 85 gaggtactgagagtgagcag 104 |||||||||||||||||||| Sbjct: 209183 gaggtactgagagtgagcag 209202
>gb|AC087694.3| Homo sapiens chromosome 8, clone RP11-55M17, complete sequence Length = 152818 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 402 ctttgatcttcagggtttct 421 |||||||||||||||||||| Sbjct: 71404 ctttgatcttcagggtttct 71385
>dbj|AK086267.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:D930017E24 product:unclassifiable, full insert sequence Length = 2809 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 aggatttaggctctccttgt 650 |||||||||||||||||||| Sbjct: 794 aggatttaggctctccttgt 775
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 322 agctgcagccagccgggcag 341 |||||||||||||||||||| Sbjct: 2337343 agctgcagccagccgggcag 2337324
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 agttgaggtactgagagtga 100 |||||||||||||||||||| Sbjct: 4439326 agttgaggtactgagagtga 4439345
>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence Length = 196085 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 295 aatcttcctgattatcccca 314 |||||||||||||||||||| Sbjct: 91320 aatcttcctgattatcccca 91301
>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5, complete sequence Length = 170241 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 aacattacagtcaaataaca 46 |||||||||||||||||||| Sbjct: 161562 aacattacagtcaaataaca 161581
>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0005A05 Length = 162520 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 agttgaggtactgagagtga 100 |||||||||||||||||||| Sbjct: 34056 agttgaggtactgagagtga 34075
>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0470C02 Length = 158849 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 81 agttgaggtactgagagtga 100 |||||||||||||||||||| Sbjct: 87007 agttgaggtactgagagtga 87026
>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete sequence Length = 133534 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 631 aggatttaggctctccttgt 650 |||||||||||||||||||| Sbjct: 96137 aggatttaggctctccttgt 96118
>gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete sequence Length = 189905 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 cagaaattaacttttcaaag 619 |||||||||||||||||||| Sbjct: 169666 cagaaattaacttttcaaag 169647
>dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26D17, TM0154, complete sequence Length = 85795 Score = 40.1 bits (20), Expect = 9.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 682 gcatgaagaagagaagttac 701 |||||||||||||||||||| Sbjct: 20700 gcatgaagaagagaagttac 20681
>dbj|AP004485.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08D14, TM0018, complete sequence Length = 86539 Score = 40.1 bits (20), Expect = 9.8 Identities = 29/32 (90%) Strand = Plus / Minus Query: 569 actcgcctcacaatgtcgccaagatacattcc 600 |||| ||| |||||||| |||||||||||||| Sbjct: 27542 actctcctaacaatgtcaccaagatacattcc 27511 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,890,100 Number of Sequences: 3902068 Number of extensions: 5890100 Number of successful extensions: 145708 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 59 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 145377 Number of HSP's gapped (non-prelim): 331 length of query: 713 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 690 effective length of database: 17,143,297,704 effective search space: 11828875415760 effective search space used: 11828875415760 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)