ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13d14
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase... 349 8e-93
2gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase... 349 8e-93
3ref|XM_476073.1| Oryza sativa (japonica cultivar-group), predic... 272 1e-69
4dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clon... 184 3e-43
5dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 168 2e-38
6gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome... 168 2e-38
7ref|NM_187061.1| Oryza sativa (japonica cultivar-group), mRNA 70 1e-08
8gb|DQ116383.1| Oryza sativa (japonica cultivar-group) hexokinase... 70 1e-08
9dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
10gb|AY884164.1| Oryza sativa (japonica cultivar-group) hexokinase... 70 1e-08
11dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
12dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic D... 70 1e-08
13gb|BT018960.1| Zea mays clone Contig259.F mRNA sequence 66 2e-07
14ref|NM_189656.1| Oryza sativa (japonica cultivar-group), predic... 60 1e-05
15gb|DQ116390.1| Oryza sativa (japonica cultivar-group) hexokinase... 60 1e-05
16gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase... 60 1e-05
17gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds 60 1e-05
18gb|AY884167.1| Oryza sativa (japonica cultivar-group) hexokinase... 60 1e-05
19dbj|AK099119.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
20dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
21dbj|AK064011.1| Oryza sativa (japonica cultivar-group) cDNA clon... 60 1e-05
22gb|AY105705.1| Zea mays PCO123448 mRNA sequence 52 0.003
23dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
24dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.040
25gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.63
26gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.63
27ref|XM_542111.2| PREDICTED: Canis familiaris similar to neuropat... 44 0.63
28gb|BC112748.1| Bos taurus cDNA clone MGC:137670 IMAGE:8168402, c... 44 0.63
29ref|XM_584666.2| PREDICTED: Bos taurus similar to 5-aminoimidazo... 42 2.5
30ref|XM_425787.1| PREDICTED: Gallus gallus similar to ornithine d... 42 2.5
31gb|BC060480.1| Xenopus laevis hypothetical protein MGC68729, mRN... 42 2.5
32gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, co... 40 9.8
33ref|XM_954917.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
34ref|XM_326002.1| Neurospora crassa OR74A hypothetical protein (N... 40 9.8
35gb|BC068274.1| Homo sapiens cDNA clone IMAGE:5172149, partial cds 40 9.8
36ref|XM_447744.1| Candida glabrata CBS138, CAGL0J00737g partial mRNA 40 9.8
37emb|AL353774.11| Human DNA sequence from clone RP11-267O11 on ch... 40 9.8
38gb|AY907537.1| Uncultured bacterial symbiont of Discodermia diss... 40 9.8
39emb|CR628337.1| Legionella pneumophila str. Lens complete genome 40 9.8
40emb|CR380956.1| Candida glabrata strain CBS138 chromosome J comp... 40 9.8
41gb|BC092496.1| Homo sapiens cDNA clone IMAGE:30346575 40 9.8
42emb|CR792423.5| Zebrafish DNA sequence from clone CH211-190H10 i... 40 9.8
43gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chrom... 40 9.8
44gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence 40 9.8
45gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, co... 40 9.8
46gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 m... 40 9.8
47gb|AC087694.3| Homo sapiens chromosome 8, clone RP11-55M17, comp... 40 9.8
48dbj|AK086267.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 40 9.8
49gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 9.8
50dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
51gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, comple... 40 9.8
52emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 i... 40 9.8
53dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
54dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.8
55emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chr... 40 9.8
56gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromos... 40 9.8
57dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.8
58dbj|AP004485.1| Lotus japonicus genomic DNA, chromosome 2, clone... 40 9.8

>gb|DQ116389.1| Oryza sativa (japonica cultivar-group) hexokinase 7 (HXK7) mRNA,
            complete cds
          Length = 1816

 Score =  349 bits (176), Expect = 8e-93
 Identities = 518/630 (82%), Gaps = 4/630 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
            ||||||||||| |||||||| ||||||||||||||||| ||||| || || || ||||  
Sbjct: 1477 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1418

                                                                        
Query: 146  agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
            |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 1417 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1358

                                                                        
Query: 206  aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
            |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 1357 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1298

                                                                        
Query: 266  ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
            || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 1297 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1238

                                                                        
Query: 326  gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
            |||||||||||||| || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 1237 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1178

                                                                        
Query: 386  gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445
            || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || 
Sbjct: 1177 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1118

                                                                        
Query: 446  agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505
            |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| 
Sbjct: 1117 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1058

                                                                        
Query: 506  gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563
            ||||||||| |||| ||  || ||| |  |||||||| ||||||||  | |  |||||||
Sbjct: 1057 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 1000

                                                                        
Query: 564  gaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttcaaagatct 623
            ||||||||| ||| || || || || ||||||||||| ||||| || || || |||||||
Sbjct: 999  gaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcgaagatct 940

                                                                        
Query: 624  gctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaaggc 683
            |||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| |
Sbjct: 939  gctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaagac 880

                                          
Query: 684  atgaagaagagaagttaccccattcggtat 713
            | || || ||||||||||||||||| ||||
Sbjct: 879  aggatgaggagaagttaccccattctgtat 850



to top

>gb|AY884169.1| Oryza sativa (japonica cultivar-group) hexokinase 6 (HXK6) mRNA,
            complete cds
          Length = 1652

 Score =  349 bits (176), Expect = 8e-93
 Identities = 518/630 (82%), Gaps = 4/630 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
            ||||||||||| |||||||| ||||||||||||||||| ||||| || || || ||||  
Sbjct: 1467 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1408

                                                                        
Query: 146  agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
            |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 1407 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1348

                                                                        
Query: 206  aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
            |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 1347 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1288

                                                                        
Query: 266  ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
            || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 1287 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1228

                                                                        
Query: 326  gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
            |||||||||||||| || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 1227 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1168

                                                                        
Query: 386  gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445
            || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || 
Sbjct: 1167 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1108

                                                                        
Query: 446  agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505
            |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| 
Sbjct: 1107 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1048

                                                                        
Query: 506  gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563
            ||||||||| |||| ||  || ||| |  |||||||| ||||||||  | |  |||||||
Sbjct: 1047 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 990

                                                                        
Query: 564  gaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttcaaagatct 623
            ||||||||| ||| || || || || ||||||||||| ||||| || || || |||||||
Sbjct: 989  gaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcgaagatct 930

                                                                        
Query: 624  gctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaaggc 683
            |||||| ||| |||| |||||| || |||| ||||| |||||||||||| |||||||| |
Sbjct: 929  gctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaagac 870

                                          
Query: 684  atgaagaagagaagttaccccattcggtat 713
            | || || ||||||||||||||||| ||||
Sbjct: 869  aggatgaggagaagttaccccattctgtat 840



to top

>ref|XM_476073.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1632

 Score =  272 bits (137), Expect = 1e-69
 Identities = 428/523 (81%), Gaps = 4/523 (0%)
 Strand = Plus / Minus

                                                                        
Query: 86   aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
            ||||||||||| |||||||| ||||||||||||||||| ||||| || || || ||||  
Sbjct: 1625 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 1566

                                                                        
Query: 146  agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
            |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 1565 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1506

                                                                        
Query: 206  aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
            |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 1505 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1446

                                                                        
Query: 266  ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
            || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 1445 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1386

                                                                        
Query: 326  gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
            |||||||||||||| || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 1385 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1326

                                                                        
Query: 386  gtctccaaggacgtgtctttgatcttcagggtttctgccagtgtttcggctacaatcctc 445
            || || ||||| |||||| ||||||||||| | ||||| ||| |||| || ||||| || 
Sbjct: 1325 gtttctaaggatgtgtctgtgatcttcaggttatctgcaagtttttcagccacaattctg 1266

                                                                        
Query: 446  agatcaggggtttcatcatggtgcatcgcggaaatatcaggagtcctcagaatcaagcga 505
            |||||||| ||| ||||||| |||||| ||||||||||||||||||||||||| ||||| 
Sbjct: 1265 agatcaggtgttccatcatgatgcatcacggaaatatcaggagtcctcagaataaagcgg 1206

                                                                        
Query: 506  gttttgagcctggtgtg--cttgatgggaccaaaaatcgaagactgtgaggcgattttaa 563
            ||||||||| |||| ||  || ||| |  |||||||| ||||||||  | |  |||||||
Sbjct: 1205 gttttgagcttggtctgatctagattg--ccaaaaattgaagactgcaaagatattttaa 1148

                                                       
Query: 564  gaagcactcgcctcacaatgtcgccaagatacattccagaaat 606
            ||||||||| ||| || || || || ||||||||||| |||||
Sbjct: 1147 gaagcactctccttacgatttcacctagatacattcctgaaat 1105



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Minus

                                                                        
Query: 622  ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681
            |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| ||||||||
Sbjct: 1047 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 988

                                            
Query: 682  gcatgaagaagagaagttaccccattcggtat 713
             || || || ||||||||||||||||| ||||
Sbjct: 987  acaggatgaggagaagttaccccattctgtat 956



to top

>dbj|AK067988.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123D05, full
            insert sequence
          Length = 1777

 Score =  184 bits (93), Expect = 3e-43
 Identities = 255/307 (83%), Gaps = 4/307 (1%)
 Strand = Plus / Minus

                                                                        
Query: 409  cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468
            ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| ||
Sbjct: 1190 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 1131

                                                                        
Query: 469  catcgcggaaatatcaggagtcctcagaatcaagcgagttttgagcctggtgtg--cttg 526
            |||| ||||||||||||||||||||||||| ||||| ||||||||| |||| ||  || |
Sbjct: 1130 catcacggaaatatcaggagtcctcagaataaagcgggttttgagcttggtctgatctag 1071

                                                                        
Query: 527  atgggaccaaaaatcgaagactgtgaggcgattttaagaagcactcgcctcacaatgtcg 586
            || |  |||||||| ||||||||  | |  |||||||||||||||| ||| || || || 
Sbjct: 1070 attg--ccaaaaattgaagactgcaaagatattttaagaagcactctccttacgatttca 1013

                                                                        
Query: 587  ccaagatacattccagaaattaacttttcaaagatctgctctctaggatttaggctctcc 646
            || ||||||||||| ||||| || || || ||||||||||||| ||| |||| |||||| 
Sbjct: 1012 cctagatacattcctgaaatcaatttctcgaagatctgctctccagggtttaagctctct 953

                                                                        
Query: 647  ttgtctaatgcttgatcatattctgtgattggaaggcatgaagaagagaagttaccccat 706
            || |||| ||||| |||||||||||| |||||||| || || || |||||||||||||||
Sbjct: 952  ttatctagtgcttcatcatattctgttattggaagacaggatgaggagaagttaccccat 893

                   
Query: 707  tcggtat 713
            || ||||
Sbjct: 892  tctgtat 886



 Score =  153 bits (77), Expect = 9e-34
 Identities = 263/325 (80%)
 Strand = Plus / Minus

                                                                        
Query: 86   aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
            ||||||||||| |||||||| |||||||| |||||||| ||||| || || || ||||  
Sbjct: 1610 aggtactgagaatgagcagctgcaatcagtgcagctccaaggccagacccgtcgtttgca 1551

                                                                        
Query: 146  agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
            |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 1550 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 1491

                                                                        
Query: 206  aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
            |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 1490 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 1431

                                                                        
Query: 266  ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
            || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 1430 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 1371

                                                                        
Query: 326  gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
            |||||||||||| | || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 1370 gcagccagccggtctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 1311

                                     
Query: 386  gtctccaaggacgtgtctttgatct 410
            || || ||||| |||||| ||||||
Sbjct: 1310 gtttctaaggatgtgtctgtgatct 1286



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  168 bits (85), Expect = 2e-38
 Identities = 265/325 (81%)
 Strand = Plus / Plus

                                                                           
Query: 86      aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
               ||||||||||| |||||||| ||||||||||||||||| ||||| || || || ||||  
Sbjct: 5281112 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 5281171

                                                                           
Query: 146     agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
               |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 5281172 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 5281231

                                                                           
Query: 206     aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
               |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 5281232 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 5281291

                                                                           
Query: 266     ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
               || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 5281292 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 5281351

                                                                           
Query: 326     gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
               |||||||||||||| || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 5281352 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 5281411

                                        
Query: 386     gtctccaaggacgtgtctttgatct 410
               || || ||||| |||||| ||||||
Sbjct: 5281412 gtttctaaggatgtgtctgtgatct 5281436



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                           
Query: 622     ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681
               |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| ||||||||
Sbjct: 5282071 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 5282130

                                               
Query: 682     gcatgaagaagagaagttaccccattcggtat 713
                || || || ||||||||||||||||| ||||
Sbjct: 5282131 acaggatgaggagaagttaccccattctgtat 5282162



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                           
Query: 409     cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468
               ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| ||
Sbjct: 5281532 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 5281591

                                       
Query: 469     catcgcggaaatatcaggagtcct 492
               |||| |||||||||||||||||||
Sbjct: 5281592 catcacggaaatatcaggagtcct 5281615



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                           
Query: 557     attttaagaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttca 616
               |||||||||||||||| ||| || || || || ||||||||||| ||||| || || || 
Sbjct: 5281899 attttaagaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcg 5281958

                       
Query: 617     aagatctg 624
               ||||||||
Sbjct: 5281959 aagatctg 5281966



 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                              
Query: 587      ccaagatacattccagaaattaacttttca 616
                ||||||||||| |||||||| |||||||||
Sbjct: 25820491 ccaagatacatgccagaaatcaacttttca 25820462



to top

>gb|AC093954.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1097_A12,
             complete sequence
          Length = 88725

 Score =  168 bits (85), Expect = 2e-38
 Identities = 265/325 (81%)
 Strand = Plus / Plus

                                                                         
Query: 86    aggtactgagagtgagcagccgcaatcagggcagctccgaggcccgaaccatcctttgtg 145
             ||||||||||| |||||||| ||||||||||||||||| ||||| || || || ||||  
Sbjct: 17813 aggtactgagaatgagcagctgcaatcagggcagctccaaggccagacccgtcgtttgca 17872

                                                                         
Query: 146   agcttgaccgcgacaaactccgacgcctcctcgccaagcagctccaccagcgtgctctcc 205
             |||||||| || ||  ||| ||||||||| || || |||| ||||  ||||||| |||||
Sbjct: 17873 agcttgacagccaccgacttcgacgcctcttctccgagcaactccgtcagcgtggtctcc 17932

                                                                         
Query: 206   aggcactgccggaacttggcgtaatgctcaaacagcccgccgtcgatggcgatgactgtc 265
             |||||||||||||| | || |||||| ||| | || ||||| |||||||||||||| | |
Sbjct: 17933 aggcactgccggaattcggtgtaatgttcatatagaccgccatcgatggcgatgaccgac 17992

                                                                         
Query: 266   ttccttttgtcgcctggtgtgcccctaccaatcttcctgattatccccacaatcccagct 325
             || |  |||||||||||   ||| || || ||||||||||  ||||| || |||||||| 
Sbjct: 17993 tttcgcttgtcgcctgggacgcctctgccgatcttcctgaggatccctacgatcccagca 18052

                                                                         
Query: 326   gcagccagccgggcagacctactggtcacaatgtcgcagatttcaacgaccatcttccga 385
             |||||||||||||| || || | ||| || ||||| |||||||| || ||||||||||  
Sbjct: 18053 gcagccagccgggctgatcttcgggtgacgatgtcacagatttcgacaaccatcttcctt 18112

                                      
Query: 386   gtctccaaggacgtgtctttgatct 410
             || || ||||| |||||| ||||||
Sbjct: 18113 gtttctaaggatgtgtctgtgatct 18137



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 79/92 (85%)
 Strand = Plus / Plus

                                                                         
Query: 622   ctgctctctaggatttaggctctccttgtctaatgcttgatcatattctgtgattggaag 681
             |||||||| ||| |||| |||||| || |||| ||||| |||||||||||| ||||||||
Sbjct: 18772 ctgctctccagggtttaagctctctttatctagtgcttcatcatattctgttattggaag 18831

                                             
Query: 682   gcatgaagaagagaagttaccccattcggtat 713
              || || || ||||||||||||||||| ||||
Sbjct: 18832 acaggatgaggagaagttaccccattctgtat 18863



 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                         
Query: 409   cttcagggtttctgccagtgtttcggctacaatcctcagatcaggggtttcatcatggtg 468
             ||||||| | ||||| ||| |||| || ||||| || |||||||| ||| ||||||| ||
Sbjct: 18233 cttcaggttatctgcaagtttttcagccacaattctgagatcaggtgttccatcatgatg 18292

                                     
Query: 469   catcgcggaaatatcaggagtcct 492
             |||| |||||||||||||||||||
Sbjct: 18293 catcacggaaatatcaggagtcct 18316



 Score = 48.1 bits (24), Expect = 0.040
 Identities = 57/68 (83%)
 Strand = Plus / Plus

                                                                         
Query: 557   attttaagaagcactcgcctcacaatgtcgccaagatacattccagaaattaacttttca 616
             |||||||||||||||| ||| || || || || ||||||||||| ||||| || || || 
Sbjct: 18600 attttaagaagcactctccttacgatttcacctagatacattcctgaaatcaatttctcg 18659

                     
Query: 617   aagatctg 624
             ||||||||
Sbjct: 18660 aagatctg 18667



to top

>ref|NM_187061.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 163  ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
            ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 1416 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1357

                                       
Query: 223  ggcgtaatgctcaaacagcccgccgtc 249
            | |||| ||||| ||||||||||||||
Sbjct: 1356 gccgtagtgctcgaacagcccgccgtc 1330



to top

>gb|DQ116383.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA,
            complete cds
          Length = 1626

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 163  ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
            ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 1451 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1392

                                       
Query: 223  ggcgtaatgctcaaacagcccgccgtc 249
            | |||| ||||| ||||||||||||||
Sbjct: 1391 gccgtagtgctcgaacagcccgccgtc 1365



to top

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                            
Query: 163      ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
                ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 15241051 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 15240992

                                           
Query: 223      ggcgtaatgctcaaacagcccgccgtc 249
                | |||| ||||| ||||||||||||||
Sbjct: 15240991 gccgtagtgctcgaacagcccgccgtc 15240965



to top

>gb|AY884164.1| Oryza sativa (japonica cultivar-group) hexokinase 1 (HXK1) mRNA,
            complete cds
          Length = 1584

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                        
Query: 163  ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
            ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 1475 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 1416

                                       
Query: 223  ggcgtaatgctcaaacagcccgccgtc 249
            | |||| ||||| ||||||||||||||
Sbjct: 1415 gccgtagtgctcgaacagcccgccgtc 1389



to top

>dbj|AP004668.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0475E07
          Length = 139961

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                         
Query: 163   ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
             ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 27064 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 27005

                                        
Query: 223   ggcgtaatgctcaaacagcccgccgtc 249
             | |||| ||||| ||||||||||||||
Sbjct: 27004 gccgtagtgctcgaacagcccgccgtc 26978



to top

>dbj|AP004395.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0030H06
          Length = 147890

 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 74/87 (85%)
 Strand = Plus / Minus

                                                                          
Query: 163    ctccgacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaactt 222
              ||||| |||| |||| || |||||||||  || || |||||||| |||| ||||||||||
Sbjct: 107800 ctccgccgccgcctctccgagcagctccctcaccgcgctctccatgcaccgccggaactt 107741

                                         
Query: 223    ggcgtaatgctcaaacagcccgccgtc 249
              | |||| ||||| ||||||||||||||
Sbjct: 107740 gccgtagtgctcgaacagcccgccgtc 107714



to top

>gb|BT018960.1| Zea mays clone Contig259.F mRNA sequence
          Length = 599

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 81/97 (83%)
 Strand = Plus / Minus

                                                                       
Query: 167 gacgcctcctcgccaagcagctccaccagcgtgctctccaggcactgccggaacttggcg 226
           |||||||| || || ||||||||  |||| ||| |||||| |||| | ||||| |||| |
Sbjct: 140 gacgcctcgtctcctagcagctcacccagtgtggtctccaagcaccggcggaatttggtg 81

                                                
Query: 227 taatgctcaaacagcccgccgtcgatggcgatgactg 263
           || ||||| ||||| || |||||||||||||||||||
Sbjct: 80  tagtgctcgaacagtcctccgtcgatggcgatgactg 44



to top

>ref|NM_189656.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1800

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 592  atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651
            ||||||||| ||  ||||||| ||| | |||||||||| ||| |||| ||| ||||||||
Sbjct: 1296 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1237

                              
Query: 652  taatgcttgatcatattc 669
            |||||||| ||| |||||
Sbjct: 1236 taatgcttcatcgtattc 1219



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 449  tcaggggtttcatcatggtgcatcgcggaaat 480
            ||||| ||||||||||||||||| || |||||
Sbjct: 1439 tcaggtgtttcatcatggtgcattgcagaaat 1408



to top

>gb|DQ116390.1| Oryza sativa (japonica cultivar-group) hexokinase 8 (HXK8) mRNA,
            complete cds
          Length = 1835

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 592  atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651
            ||||||||| ||  ||||||| ||| | |||||||||| ||| |||| ||| ||||||||
Sbjct: 1137 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1078

                              
Query: 652  taatgcttgatcatattc 669
            |||||||| ||| |||||
Sbjct: 1077 taatgcttcatcgtattc 1060



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 449  tcaggggtttcatcatggtgcatcgcggaaat 480
            ||||| ||||||||||||||||| || |||||
Sbjct: 1280 tcaggtgtttcatcatggtgcattgcagaaat 1249



to top

>gb|DQ116387.1| Oryza sativa (japonica cultivar-group) hexokinase 5 (HXK5) mRNA,
            complete cds
          Length = 2058

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 587  ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636
            ||||||||||| |||||||| ||||||||| | |||||||||| ||||||
Sbjct: 1148 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 1099



to top

>gb|AF372831.1|AF372831 Oryza sativa hexokinase I mRNA, complete cds
          Length = 1965

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 587  ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636
            ||||||||||| |||||||| ||||||||| | |||||||||| ||||||
Sbjct: 1029 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 980



to top

>gb|AY884167.1| Oryza sativa (japonica cultivar-group) hexokinase 4 (HXK4) mRNA,
           complete cds
          Length = 1622

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651
           ||||||||| ||  ||||||| ||| | |||||||||| ||| |||| ||| ||||||||
Sbjct: 962 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 903

                             
Query: 652 taatgcttgatcatattc 669
           |||||||| ||| |||||
Sbjct: 902 taatgcttcatcgtattc 885



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 449  tcaggggtttcatcatggtgcatcgcggaaat 480
            ||||| ||||||||||||||||| || |||||
Sbjct: 1105 tcaggtgtttcatcatggtgcattgcagaaat 1074



to top

>dbj|AK099119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023038N14, full
           insert sequence
          Length = 1634

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                       
Query: 592 atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651
           ||||||||| ||  ||||||| ||| | |||||||||| ||| |||| ||| ||||||||
Sbjct: 943 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 884

                             
Query: 652 taatgcttgatcatattc 669
           |||||||| ||| |||||
Sbjct: 883 taatgcttcatcgtattc 866



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 449  tcaggggtttcatcatggtgcatcgcggaaat 480
            ||||| ||||||||||||||||| || |||||
Sbjct: 1086 tcaggtgtttcatcatggtgcattgcagaaat 1055



to top

>dbj|AK065207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002F14, full
            insert sequence
          Length = 2033

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                              
Query: 587  ccaagatacattccagaaattaacttttcaaagatctgctctctaggatt 636
            ||||||||||| |||||||| ||||||||| | |||||||||| ||||||
Sbjct: 1138 ccaagatacatgccagaaatcaacttttcatatatctgctctccaggatt 1089



to top

>dbj|AK064011.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-124-G12, full
            insert sequence
          Length = 1868

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 66/78 (84%)
 Strand = Plus / Minus

                                                                        
Query: 592  atacattccagaaattaacttttcaaagatctgctctctaggatttaggctctccttgtc 651
            ||||||||| ||  ||||||| ||| | |||||||||| ||| |||| ||| ||||||||
Sbjct: 1154 atacattcctgatgttaacttctcatatatctgctctccagggtttaagctttccttgtc 1095

                              
Query: 652  taatgcttgatcatattc 669
            |||||||| ||| |||||
Sbjct: 1094 taatgcttcatcgtattc 1077



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 449  tcaggggtttcatcatggtgcatcgcggaaat 480
            ||||| ||||||||||||||||| || |||||
Sbjct: 1297 tcaggtgtttcatcatggtgcattgcagaaat 1266



to top

>gb|AY105705.1| Zea mays PCO123448 mRNA sequence
          Length = 1993

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                             
Query: 578 acaatgtcgccaagatacattccagaaattaacttttcaaagatctgctc 627
           ||||| || |||||||||||||||||||| | ||||||| | ||||||||
Sbjct: 963 acaatttctccaagatacattccagaaatcatcttttcatatatctgctc 914



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                               
Query: 622     ctgctctctaggatttaggctctccttgtctaatgcttgatcatattc 669
               |||||||| ||| |||| ||| |||||||||||||||| ||| |||||
Sbjct: 4820244 ctgctctccagggtttaagctttccttgtctaatgcttcatcgtattc 4820291



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                               
Query: 449     tcaggggtttcatcatggtgcatcgcggaaat 480
               ||||| ||||||||||||||||| || |||||
Sbjct: 4819799 tcaggtgtttcatcatggtgcattgcagaaat 4819830



to top

>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0710E05
          Length = 179714

 Score = 48.1 bits (24), Expect = 0.040
 Identities = 42/48 (87%)
 Strand = Plus / Plus

                                                             
Query: 622   ctgctctctaggatttaggctctccttgtctaatgcttgatcatattc 669
             |||||||| ||| |||| ||| |||||||||||||||| ||| |||||
Sbjct: 64893 ctgctctccagggtttaagctttccttgtctaatgcttcatcgtattc 64940



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 449   tcaggggtttcatcatggtgcatcgcggaaat 480
             ||||| ||||||||||||||||| || |||||
Sbjct: 64448 tcaggtgtttcatcatggtgcattgcagaaat 64479



to top

>gb|AC118284.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1087_C03,
             complete sequence
          Length = 101218

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 587   ccaagatacattccagaaattaacttttca 616
             ||||||||||| |||||||| |||||||||
Sbjct: 91785 ccaagatacatgccagaaatcaacttttca 91756



to top

>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0075A10, complete sequence
          Length = 171101

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 587   ccaagatacattccagaaattaacttttca 616
             ||||||||||| |||||||| |||||||||
Sbjct: 54433 ccaagatacatgccagaaatcaacttttca 54404



to top

>ref|XM_542111.2| PREDICTED: Canis familiaris similar to neuropathy target esterase
            (LOC484993), mRNA
          Length = 4425

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 246  cgtcgatggcgatgactgtctt 267
            ||||||||||||||||||||||
Sbjct: 3769 cgtcgatggcgatgactgtctt 3748



to top

>gb|BC112748.1| Bos taurus cDNA clone MGC:137670 IMAGE:8168402, complete cds
          Length = 2994

 Score = 44.1 bits (22), Expect = 0.63
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 246  cgtcgatggcgatgactgtctt 267
            ||||||||||||||||||||||
Sbjct: 1919 cgtcgatggcgatgactgtctt 1898



to top

>ref|XM_584666.2| PREDICTED: Bos taurus similar to 5-aminoimidazole-4-carboxamide
           ribonucleotide formyltransferase/IMP cyclohydrolase
           (LOC507963), partial mRNA
          Length = 412

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 386 gtctccaaggacgtgtctttg 406
           |||||||||||||||||||||
Sbjct: 233 gtctccaaggacgtgtctttg 213



to top

>ref|XM_425787.1| PREDICTED: Gallus gallus similar to ornithine decarboxylase-like
           protein; ODC-paralog; arginine decarboxylase
           (LOC428228), mRNA
          Length = 1266

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 184 cagctccaccagcgtgctctccagg 208
           |||||||||||| ||||||||||||
Sbjct: 90  cagctccaccagggtgctctccagg 66



to top

>gb|BC060480.1| Xenopus laevis hypothetical protein MGC68729, mRNA (cDNA clone
           MGC:68729 IMAGE:4057778), complete cds
          Length = 3376

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 313 cacaatcccagctgcagccag 333
           |||||||||||||||||||||
Sbjct: 155 cacaatcccagctgcagccag 135



to top

>gb|AC158304.11| Mus musculus chromosome 7, clone RP24-192F23, complete sequence
          Length = 166451

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 85    gaggtactgagagtgagcag 104
             ||||||||||||||||||||
Sbjct: 33645 gaggtactgagagtgagcag 33664



to top

>ref|XM_954917.1| Neurospora crassa OR74A hypothetical protein (NCU06148.1) partial
           mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 tggcgatgactgtcttcctt 271
           ||||||||||||||||||||
Sbjct: 366 tggcgatgactgtcttcctt 347



to top

>ref|XM_326002.1| Neurospora crassa OR74A hypothetical protein (NCU06148.1) partial
           mRNA
          Length = 2316

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 tggcgatgactgtcttcctt 271
           ||||||||||||||||||||
Sbjct: 366 tggcgatgactgtcttcctt 347



to top

>gb|BC068274.1| Homo sapiens cDNA clone IMAGE:5172149, partial cds
          Length = 1935

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  aatcttcctgattatcccca 314
            ||||||||||||||||||||
Sbjct: 1745 aatcttcctgattatcccca 1726



to top

>ref|XM_447744.1| Candida glabrata CBS138, CAGL0J00737g partial mRNA
          Length = 249

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 11  gtacaaagaacagtagaaca 30
           ||||||||||||||||||||
Sbjct: 194 gtacaaagaacagtagaaca 175



to top

>emb|AL353774.11| Human DNA sequence from clone RP11-267O11 on chromosome 9, complete
             sequence
          Length = 118588

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     tctttgaaatgtacaaagaa 20
             ||||||||||||||||||||
Sbjct: 62933 tctttgaaatgtacaaagaa 62952



to top

>gb|AY907537.1| Uncultured bacterial symbiont of Discodermia dissoluta polyketide
             synthesis gene cluster, partial sequence
          Length = 124311

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   cagctccaccagcgtgctctccag 207
             |||||||||||||| |||||||||
Sbjct: 51676 cagctccaccagcgcgctctccag 51653



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   cagctccaccagcgtgctctccag 207
             |||||||||||||| |||||||||
Sbjct: 45499 cagctccaccagcgcgctctccag 45476



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   cagctccaccagcgtgctctccag 207
             |||||||||||||| |||||||||
Sbjct: 37822 cagctccaccagcgcgctctccag 37799



 Score = 40.1 bits (20), Expect = 9.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 184   cagctccaccagcgtgctctccag 207
             |||||||||||||| |||||||||
Sbjct: 25357 cagctccaccagcgcgctctccag 25334



to top

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 496     aatcaagcgagttttgagcc 515
               ||||||||||||||||||||
Sbjct: 2328060 aatcaagcgagttttgagcc 2328041



to top

>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence
          Length = 1192501

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 11    gtacaaagaacagtagaaca 30
             ||||||||||||||||||||
Sbjct: 73776 gtacaaagaacagtagaaca 73757



to top

>gb|BC092496.1| Homo sapiens cDNA clone IMAGE:30346575
          Length = 1756

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 295  aatcttcctgattatcccca 314
            ||||||||||||||||||||
Sbjct: 1609 aatcttcctgattatcccca 1590



to top

>emb|CR792423.5| Zebrafish DNA sequence from clone CH211-190H10 in linkage group 5,
             complete sequence
          Length = 154548

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 27    aacattacagtcaaataaca 46
             ||||||||||||||||||||
Sbjct: 99755 aacattacagtcaaataaca 99736



to top

>gb|AC183294.3| Pan troglodytes BAC clone CH251-545A24 from chromosome 17, complete
             sequence
          Length = 173991

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   cagctgcagccagccgggca 340
             ||||||||||||||||||||
Sbjct: 57081 cagctgcagccagccgggca 57062



to top

>gb|AC107926.6| Homo sapiens, clone RP11-381P6, complete sequence
          Length = 176040

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 24     tagaacattacagtcaaataacaacagt 51
              |||||||| | |||||||||||||||||
Sbjct: 102084 tagaacatgaaagtcaaataacaacagt 102111



to top

>gb|AC090774.6| Homo sapiens chromosome 17, clone RP11-344E13, complete sequence
          Length = 207418

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 24    tagaacattacagtcaaataacaacagt 51
             |||||||| | |||||||||||||||||
Sbjct: 82968 tagaacatgaaagtcaaataacaacagt 82995



to top

>gb|AC074312.64| Mus musculus strain C57BL/6J clone rp23-311c19 map 7, complete sequence
          Length = 220077

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     gaggtactgagagtgagcag 104
              ||||||||||||||||||||
Sbjct: 209183 gaggtactgagagtgagcag 209202



to top

>gb|AC087694.3| Homo sapiens chromosome 8, clone RP11-55M17, complete sequence
          Length = 152818

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   ctttgatcttcagggtttct 421
             ||||||||||||||||||||
Sbjct: 71404 ctttgatcttcagggtttct 71385



to top

>dbj|AK086267.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
           library, clone:D930017E24 product:unclassifiable, full
           insert sequence
          Length = 2809

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 631 aggatttaggctctccttgt 650
           ||||||||||||||||||||
Sbjct: 794 aggatttaggctctccttgt 775



to top

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 322     agctgcagccagccgggcag 341
               ||||||||||||||||||||
Sbjct: 2337343 agctgcagccagccgggcag 2337324



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 81      agttgaggtactgagagtga 100
               ||||||||||||||||||||
Sbjct: 4439326 agttgaggtactgagagtga 4439345



to top

>gb|AC016737.8| Homo sapiens BAC clone RP11-394I13 from 2, complete sequence
          Length = 196085

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 295   aatcttcctgattatcccca 314
             ||||||||||||||||||||
Sbjct: 91320 aatcttcctgattatcccca 91301



to top

>emb|BX119902.4| Zebrafish DNA sequence from clone CH211-137I24 in linkage group 5,
              complete sequence
          Length = 170241

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 27     aacattacagtcaaataaca 46
              ||||||||||||||||||||
Sbjct: 161562 aacattacagtcaaataaca 161581



to top

>dbj|AP005913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:OSJNBb0005A05
          Length = 162520

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agttgaggtactgagagtga 100
             ||||||||||||||||||||
Sbjct: 34056 agttgaggtactgagagtga 34075



to top

>dbj|AP003508.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0470C02
          Length = 158849

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 81    agttgaggtactgagagtga 100
             ||||||||||||||||||||
Sbjct: 87007 agttgaggtactgagagtga 87026



to top

>emb|AL929233.9| Mouse DNA sequence from clone RP23-388H13 on chromosome 2, complete
             sequence
          Length = 133534

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 631   aggatttaggctctccttgt 650
             ||||||||||||||||||||
Sbjct: 96137 aggatttaggctctccttgt 96118



to top

>gb|AC161466.4| Gallus gallus BAC clone CH261-104N11 from chromosome ul, complete
              sequence
          Length = 189905

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 600    cagaaattaacttttcaaag 619
              ||||||||||||||||||||
Sbjct: 169666 cagaaattaacttttcaaag 169647



to top

>dbj|AP006090.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT26D17, TM0154,
             complete sequence
          Length = 85795

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 682   gcatgaagaagagaagttac 701
             ||||||||||||||||||||
Sbjct: 20700 gcatgaagaagagaagttac 20681



to top

>dbj|AP004485.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT08D14, TM0018,
             complete sequence
          Length = 86539

 Score = 40.1 bits (20), Expect = 9.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 569   actcgcctcacaatgtcgccaagatacattcc 600
             |||| ||| |||||||| ||||||||||||||
Sbjct: 27542 actctcctaacaatgtcaccaagatacattcc 27511


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,890,100
Number of Sequences: 3902068
Number of extensions: 5890100
Number of successful extensions: 145708
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145377
Number of HSP's gapped (non-prelim): 331
length of query: 713
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 690
effective length of database: 17,143,297,704
effective search space: 11828875415760
effective search space used: 11828875415760
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top