Clone Name	rbasd13d11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, ...	504	e-139
2	gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones B...	163	1e-36
3	gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposo...	149	2e-32
4	gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotrans...	149	2e-32
5	gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long term...	149	2e-32
6	emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H	141	4e-30
7	gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC cl...	139	1e-29
8	gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B...	133	9e-28
9	gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complet...	131	4e-27
10	gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple...	125	2e-25
11	gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote...	119	1e-23
12	gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, ...	111	3e-21
13	gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rp...	78	5e-11
14	gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg...	78	5e-11
15	gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retr...	58	4e-05
16	gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotra...	52	0.003
17	gb|AC090888.4| Homo sapiens chromosome 15 clone CTD-2014N11 map ...	48	0.042
18	gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map ...	48	0.042
19	gb|AC020978.10| Homo sapiens chromosome 16 clone RP11-96D1, comp...	48	0.042
20	gb|AF411057.1|AF411057 Homo sapiens clone BAC_22606 CD28 antigen...	46	0.16
21	gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, comple...	46	0.16
22	gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete se...	46	0.16
23	emb|AL353801.13| Human DNA sequence from clone RP11-285G1 on chr...	44	0.65
24	gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence	44	0.65
25	dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome	44	0.65
26	gb|AF207760.1|AF207760 Hepatitis C virus strain MD19 complete ge...	44	0.65
27	ref|NM_186505.1| Oryza sativa (japonica cultivar-group), mRNA	42	2.6
28	gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial c...	42	2.6
29	gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, co...	42	2.6
30	emb|BX640428.1| Bordetella parapertussis strain 12822, complete ...	42	2.6
31	gb|AC108681.2| Homo sapiens 3q BAC RP11-30O15 (Roswell Park Canc...	42	2.6
32	gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome	42	2.6
33	gb|AC151598.2| Medicago truncatula chromosome 2 BAC clone mte1-4...	42	2.6
34	gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1...	42	2.6
35	ref|XM_395108.2| PREDICTED: Apis mellifera similar to dynein hea...	42	2.6
36	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	42	2.6
37	dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic D...	42	2.6
38	gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome	42	2.6
39	gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete g...	42	2.6

---

>gb|AY943294.1| Hordeum vulgare subsp. vulgare clone BAC 673I14, complete sequence
          Length = 108608

 Score =  504 bits (254), Expect = e-139
 Identities = 328/347 (94%), Gaps = 8/347 (2%)
 Strand = Plus / Minus

                                                                         
Query: 1     tgcacaaatgatagaattc-atctagggcacaacacactagcagaaacataacacacaca 59
             ||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 52850 tgcacaaatgatagaattatatctagggcacaacacactagcagaaacataacacacaca 52791

                                                                         
Query: 60    c--tgccacttaattggttt-cttagatcaaatagaaactaaactagccataatgatgat 116
             |  ||||||||||||||||| ||| || |||||||||||||||||||||| |||||||||
Sbjct: 52790 cactgccacttaattggtttgcttcgagcaaatagaaactaaactagccacaatgatgat 52731

                                                                         
Query: 117   gccaagaacaaagagaaaacccattgtttccatgagatcattccttttctgcaacttcaa 176
             |||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||
Sbjct: 52730 gccaagaacaaagagaaaacacattgtttccatgagctcattccttttctgcaacttcaa 52671

                                                                         
Query: 177   ttgcattttcttgtttt-attgttcagatccataaccttcttctccatcctactagcttt 235
             ||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 52670 ttgcattttcttgttttcattattcagatccataaccttcttctccatcctactagcttt 52611

                                                                         
Query: 236   gatccaactacgttaaaggccaccatggagctcctgaaaagcttgccccactagctcagt 295
             |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||||||||
Sbjct: 52610 gatccaactacgttcaaggccaccatggaactcctcaaaagcttgccacactagctcagt 52551

                                                            
Query: 296   gggaggggg---tcaatccaaacaacccaatcacactcatcaggaag 339
             |||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 52550 gggagggggggttcaatccaaacaacccaatcacactcatcaggaag 52504



 Score =  291 bits (147), Expect = 2e-75
 Identities = 172/179 (96%), Gaps = 1/179 (0%)
 Strand = Plus / Minus

                                                                         
Query: 340   atcgagtggacaacccaaaaaccttcttcccgtgcttgctccaccccaagaaacacgacg 399
             |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||
Sbjct: 52410 atcgagtggacaacccaaaaaccttctttccgtgcttgctccaccccaagaaacacggcg 52351

                                                                         
Query: 400   agcaggaattagcccatgccccgggcaacggtgattcgagcgctcctcaaggccgtagaa 459
             |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 52350 agcaggaattagcccatgccccgggcaacggtgattcgggcgctcctcaaggccgtagaa 52291

                                                                        
Query: 460   a-ttggattgggaatgaaaaattcggattggaactgcacagttccgcatccatccacct 517
             | |||||||||||||||||||||||||||||||||||||| | ||||| ||||||||||
Sbjct: 52290 acttggattgggaatgaaaaattcggattggaactgcacaatcccgcagccatccacct 52232

---

>gb|AY643843.1|AY643842S2 Hordeum vulgare subsp. vulgare clones BAC 519K7 and 799C8 hardness
             locus region
          Length = 129099

 Score =  163 bits (82), Expect = 1e-36
 Identities = 91/94 (96%)
 Strand = Plus / Plus

                                                                         
Query: 515   cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
             ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 69687 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 69746

                                               
Query: 575   cgggtcctcacaatccggcacgttgcggaactct 608
             |||||||||||||||||||||| |||||||||||
Sbjct: 69747 cgggtcctcacaatccggcacgctgcggaactct 69780

---

>gb|AF453665.1| Hordeum vulgare isolate HV Sukkula retrotransposon, partial sequence
          Length = 7674

 Score =  149 bits (75), Expect = 2e-32
 Identities = 91/95 (95%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2656 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 2597

                                               
Query: 575  cgggtcctcacaatccggcacg-ttgcggaactct 608
            || ||||||||||||||||||| ||||||||||||
Sbjct: 2596 cgagtcctcacaatccggcacgcttgcggaactct 2562

---

>gb|AY054377.1| Hordeum vulgare clone LTR-INS1 Sukkula retrotransposon long terminal
            repeat, complete sequence
          Length = 7575

 Score =  149 bits (75), Expect = 2e-32
 Identities = 91/95 (95%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2656 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 2597

                                               
Query: 575  cgggtcctcacaatccggcacg-ttgcggaactct 608
            || ||||||||||||||||||| ||||||||||||
Sbjct: 2596 cgagtcctcacaatccggcacgcttgcggaactct 2562

---

>gb|AY054376.1| Hordeum vulgare Sukkula retrotransposon long terminal repeat, partial
            and complete sequences
          Length = 11820

 Score =  149 bits (75), Expect = 2e-32
 Identities = 91/95 (95%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2656 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 2597

                                               
Query: 575  cgggtcctcacaatccggcacg-ttgcggaactct 608
            || ||||||||||||||||||| ||||||||||||
Sbjct: 2596 cgagtcctcacaatccggcacgcttgcggaactct 2562

---

>emb|Y14573.1|HVCH4H Hordeum vulgare DNA for chromosome 4H
          Length = 59748

 Score =  141 bits (71), Expect = 4e-30
 Identities = 90/95 (94%), Gaps = 1/95 (1%)
 Strand = Plus / Plus

                                                                         
Query: 515   cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
             ||||||||||||||| ||||||||||||||||||||||||||||||| || |||||||||
Sbjct: 38835 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaactgacgtagtcgaa 38894

                                                
Query: 575   cgggtcctcacaatccggcacg-ttgcggaactct 608
             ||||||||||||||||| |||| ||||||||||||
Sbjct: 38895 cgggtcctcacaatccgacacgcttgcggaactct 38929

---

>gb|AF474072.1| Hordeum vulgare sp. vulgare cultivar Morex BAC clone 773k14, complete
             sequence
          Length = 113510

 Score =  139 bits (70), Expect = 1e-29
 Identities = 88/94 (93%)
 Strand = Plus / Plus

                                                                         
Query: 515   cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
             ||||||||||||||| |||||||||||||| |||||||| |||||||||| |||||||||
Sbjct: 17917 cctgagatcccgcttggaagaagaatgcctgcgtgaagctgacgaaccgacgtagtcgaa 17976

                                               
Query: 575   cgggtcctcacaatccggcacgttgcggaactct 608
             |||||||||||||||||||||| | |||||||||
Sbjct: 17977 cgggtcctcacaatccggcacgctccggaactct 18010

---

>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness
            locus region
          Length = 160897

 Score =  133 bits (67), Expect = 9e-28
 Identities = 90/95 (94%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4858 cctgagatcccgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 4917

                                               
Query: 575  cgggtcctcacaatccggcacg-ttgcggaactct 608
            ||||||||||| ||||| |||| ||||||||||||
Sbjct: 4918 cgggtcctcac-atccgacacgcttgcggaactct 4951

---

>gb|AY485643.1| Hordeum vulgare subsp. vulgare BAC 615K1, complete sequence
          Length = 114996

 Score =  131 bits (66), Expect = 4e-27
 Identities = 87/94 (92%)
 Strand = Plus / Plus

                                                                          
Query: 515    cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
              ||||||||||||| | |||||||||   |||||||||||||||||||||| |||||||||
Sbjct: 104339 cctgagatcccgcctggaagaagaacaactccgtgaagcagacgaaccgacgtagtcgaa 104398

                                                
Query: 575    cgggtcctcacaatccggcacgttgcggaactct 608
              |||||||||||||||||||||| |||||||||||
Sbjct: 104399 cgggtcctcacaatccggcacgctgcggaactct 104432

---

>gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
          Length = 124050

 Score =  125 bits (63), Expect = 2e-25
 Identities = 89/95 (93%), Gaps = 2/95 (2%)
 Strand = Plus / Plus

                                                                         
Query: 515   cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
             |||||||||| |||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 66388 cctgagatcctgcttggaagaagaatgcctccgtgaagcagacgaaccgacgtagtcgaa 66447

                                                
Query: 575   cgggtcctcacaatccggcacg-ttgcggaactct 608
             ||||||||||| ||||| |||| ||||||||||||
Sbjct: 66448 cgggtcctcac-atccgacacgcttgcggaactct 66481

---

>gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
            intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
            complete cds
          Length = 65979

 Score =  119 bits (60), Expect = 1e-23
 Identities = 69/72 (95%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 9539 cctgagatcccgcttggaagaggaatgcctccgtgaagcagacgaaccgacgtagtcgaa 9480

                        
Query: 575  cgggtcctcaca 586
            ||||||||||||
Sbjct: 9479 cgggtcctcaca 9468

---

>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score =  111 bits (56), Expect = 3e-21
 Identities = 68/72 (94%)
 Strand = Plus / Minus

                                                                          
Query: 515    cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
              ||||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 130045 cctgagatcccgcttggaagaagaatgtctccgtgaagcacacgaaccgacgtagtcgaa 129986

                          
Query: 575    cgggtcctcaca 586
              ||||||||||||
Sbjct: 129985 cgggtcctcaca 129974



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 66/72 (91%)
 Strand = Plus / Minus

                                                                          
Query: 515    cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
              ||||||||||||||| ||||||||||| |||||||||| | ||||||||| |||||||||
Sbjct: 177378 cctgagatcccgcttggaagaagaatgtctccgtgaagaacacgaaccgacgtagtcgaa 177319

                          
Query: 575    cgggtcctcaca 586
               |||||||||||
Sbjct: 177318 tgggtcctcaca 177307



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 83/95 (87%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                          
Query: 515    cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
              ||||||||||| ||| |||||||||   |||||||||| ||||||||| | |||||||||
Sbjct: 325600 cctgagatcccacttggaagaagaacaactccgtgaagtagacgaaccaacgtagtcgaa 325541

                                                 
Query: 575    cgggtcctcacaatccggcacg-ttgcggaactct 608
              |||||||||||| |||| |||| ||||| ||||||
Sbjct: 325540 cgggtcctcacattccgacacgcttgcgaaactct 325506

---

>gb|AF509775.1| Hordeum vulgare subsp. vulgare isolate RSB409A Rpg1 region, genomic
            sequence
          Length = 7321

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 82/95 (86%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            |||||||||| |||| ||||||||| |  ||||||||||||||||||| | |||| ||||
Sbjct: 6095 cctgagatcctgcttggaagaagaacgaatccgtgaagcagacgaaccaacgtagccgaa 6036

                                               
Query: 575  cgggtcctcacaatccggcacg-ttgcggaactct 608
            ||| |||||||| |||| |||| ||||| ||||||
Sbjct: 6035 cggttcctcacattccgacacgcttgcgaaactct 6001

---

>gb|AF509774.1| Hordeum vulgare subsp. vulgare isolate RSB347 Rpg1 region, genomic
           sequence
          Length = 3124

 Score = 77.8 bits (39), Expect = 5e-11
 Identities = 82/95 (86%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 515 cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
           |||||||||| |||| ||||||||| |  ||||||||||||||||||| | |||| ||||
Sbjct: 866 cctgagatcctgcttggaagaagaacgaatccgtgaagcagacgaaccaacgtagccgaa 807

                                              
Query: 575 cgggtcctcacaatccggcacg-ttgcggaactct 608
           ||| |||||||| |||| |||| ||||| ||||||
Sbjct: 806 cggttcctcacattccgacacgcttgcgaaactct 772

---

>gb|AY054380.1| Hordeum patagonicum clone HpaLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7731

 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 65/77 (84%)
 Strand = Plus / Minus

                                                                        
Query: 515  cctgagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaa 574
            ||||||||||||||| ||||||||| |  ||||||||| |||||| || |  ||||||||
Sbjct: 2788 cctgagatcccgcttggaagaagaacgaatccgtgaagaagacgagccaacatagtcgaa 2729

                             
Query: 575  cgggtcctcacaatccg 591
            ||  |||||||| ||||
Sbjct: 2728 cgaatcctcacactccg 2712

---

>gb|AY054379.1| Hordeum murinum clone HmuLTR-INS Sukkula retrotransposon long
            terminal repeat, complete sequence
          Length = 7586

 Score = 52.0 bits (26), Expect = 0.003
 Identities = 62/74 (83%)
 Strand = Plus / Minus

                                                                        
Query: 518  gagatcccgcttagaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaacgg 577
            |||||||||||| ||||||||| |   |||||||| | ||||||| | ||||||||||| 
Sbjct: 2583 gagatcccgcttggaagaagaacgaaaccgtgaagtaaacgaaccaacgtagtcgaacga 2524

                          
Query: 578  gtcctcacaatccg 591
             |||||||| ||||
Sbjct: 2523 atcctcacactccg 2510

---

>gb|AC090888.4| Homo sapiens chromosome 15 clone CTD-2014N11 map 15q21.1, complete
             sequence
          Length = 140589

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 42    agaaacataacacacacactgcca 65
             ||||||||||||||||||||||||
Sbjct: 76472 agaaacataacacacacactgcca 76495

---

>gb|AC091117.5| Homo sapiens chromosome 15 clone RP11-109D20 map 15q15, complete
             sequence
          Length = 181312

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 42    agaaacataacacacacactgcca 65
             ||||||||||||||||||||||||
Sbjct: 25026 agaaacataacacacacactgcca 25049

---

>gb|AC020978.10| Homo sapiens chromosome 16 clone RP11-96D1, complete sequence
          Length = 164293

 Score = 48.1 bits (24), Expect = 0.042
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 181   attttcttgttttattgttcagat 204
             ||||||||||||||||||||||||
Sbjct: 22523 attttcttgttttattgttcagat 22500

---

>gb|AF411057.1|AF411057 Homo sapiens clone BAC_22606 CD28 antigen (CD28) gene, exons 1, 2 and
             3, and partial cds
          Length = 66887

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 143   tttccatgagatcattccttttc 165
             |||||||||||||||||||||||
Sbjct: 45698 tttccatgagatcattccttttc 45720

---

>gb|AC125238.5| Homo sapiens BAC clone RP11-711C24 from 2, complete sequence
          Length = 196622

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 143    tttccatgagatcattccttttc 165
              |||||||||||||||||||||||
Sbjct: 102216 tttccatgagatcattccttttc 102238

---

>gb|AF225899.1|AF225899 Homo sapiens PAC clone 219d7, complete sequence
          Length = 106539

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 143   tttccatgagatcattccttttc 165
             |||||||||||||||||||||||
Sbjct: 44856 tttccatgagatcattccttttc 44878

---

>emb|AL353801.13| Human DNA sequence from clone RP11-285G1 on chromosome 10 Contains two
              novel genes, the gene for AD037 protein (AD037), the gene
              for a decidual protein induced by progesterone (DEPP), a
              novel gene (FLJ30567), the ZNF22 gene for zinc finger
              protein 22 (KOX 15), a novel gene and two CpG islands,
              complete sequence
          Length = 222490

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 182    ttttcttgttttattgttcaga 203
              ||||||||||||||||||||||
Sbjct: 182586 ttttcttgttttattgttcaga 182607

---

>gb|AC123978.5| Papio anubis clone rp41-211d5, complete sequence
          Length = 180097

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 182   ttttcttgttttattgttcaga 203
             ||||||||||||||||||||||
Sbjct: 76745 ttttcttgttttattgttcaga 76766

---

>dbj|BA000023.2| Sulfolobus tokodaii str. 7 DNA, complete genome
          Length = 2694756

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 123     aacaaagagaaaacccattgtt 144
               ||||||||||||||||||||||
Sbjct: 1389058 aacaaagagaaaacccattgtt 1389079

---

>gb|AF207760.1|AF207760 Hepatitis C virus strain MD19 complete genome
          Length = 9379

 Score = 44.1 bits (22), Expect = 0.65
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 212  cttcttctccatcctactagct 233
            ||||||||||||||||||||||
Sbjct: 8870 cttcttctccatcctactagct 8891

---

>ref|NM_186505.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 420

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 398 cgagcaggaattagcccatgc 418
           |||||||||||||||||||||
Sbjct: 267 cgagcaggaattagcccatgc 287

---

>gb|AF326781.1| Triticum monococcum actin (ACT-1) gene, partial cds; putative chromosome
              condensation factor (CCF), putative resistance protein
              (RGA-2), putative resistance protein (RGA2) and putative
              nodulin-like-like protein (NLL) gene, complete cds; and
              retrotransposons Josephine, Angela-2, Angela-4, Heidi,
              Greti, Angela-3, Fatima, Erika-1, Angela-6, Angela-5,
              Barbara, Isabelle, Erika-2, and Claudia
          Length = 211009

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                       
Query: 531    gaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaacgggtcctcacaa 587
              ||||||||| |  ||| ||||| |||| ||| || |||||||||||| |||||||||
Sbjct: 194919 gaagaagaacgagtccatgaagtagacaaacggacgtagtcgaacggatcctcacaa 194975

---

>gb|AC103645.6| Mus musculus chromosome 19, clone RP24-510J20, complete sequence
          Length = 209224

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 40    gcagaaacataacacacacac 60
             |||||||||||||||||||||
Sbjct: 99777 gcagaaacataacacacacac 99797

---

>emb|BX640428.1| Bordetella parapertussis strain 12822, complete genome; segment 6/14
          Length = 348525

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 655    aggcgagctggggctgcagcg 675
              |||||||||||||||||||||
Sbjct: 171951 aggcgagctggggctgcagcg 171971

---

>gb|AC108681.2| Homo sapiens 3q BAC RP11-30O15 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 29347

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 258   ccatggagctcctgaaaagct 278
             |||||||||||||||||||||
Sbjct: 16358 ccatggagctcctgaaaagct 16378

---

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 305     tcaatccaaacaacccaatca 325
               |||||||||||||||||||||
Sbjct: 2194991 tcaatccaaacaacccaatca 2195011

---

>gb|AC151598.2| Medicago truncatula chromosome 2 BAC clone mte1-49g8, complete sequence
          Length = 143328

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 74    gtttcttagatcaaatagaaa 94
             |||||||||||||||||||||
Sbjct: 99200 gtttcttagatcaaatagaaa 99220

---

>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 48/57 (84%)
 Strand = Plus / Plus

                                                                      
Query: 531   gaagaagaatgcctccgtgaagcagacgaaccgatgtagtcgaacgggtcctcacaa 587
             ||||||||| |  ||| ||||| |||| ||| || |||| |||||||||||||||||
Sbjct: 85817 gaagaagaacgagtccatgaagaagacaaacggacgtagacgaacgggtcctcacaa 85873

---

>ref|XM_395108.2| PREDICTED: Apis mellifera similar to dynein heavy chain isotype 1B
           (LOC411639), mRNA
          Length = 11874

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 168 caacttcaattgcattttctt 188
           |||||||||||||||||||||
Sbjct: 192 caacttcaattgcattttctt 172

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 398     cgagcaggaattagcccatgc 418
               |||||||||||||||||||||
Sbjct: 6288968 cgagcaggaattagcccatgc 6288988

---

>dbj|AP004002.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1116_C08
          Length = 102317

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 398   cgagcaggaattagcccatgc 418
             |||||||||||||||||||||
Sbjct: 39528 cgagcaggaattagcccatgc 39548

---

>gb|CP000029.1| Staphylococcus epidermidis RP62A, complete genome
          Length = 2616530

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    aacttcaattgcattttcttg 189
              |||||||||||||||||||||
Sbjct: 573845 aacttcaattgcattttcttg 573825

---

>gb|AE015929.1| Staphylococcus epidermidis ATCC 12228, complete genome
          Length = 2499279

 Score = 42.1 bits (21), Expect = 2.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 169    aacttcaattgcattttcttg 189
              |||||||||||||||||||||
Sbjct: 681612 aacttcaattgcattttcttg 681592


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,406,645
Number of Sequences: 3902068
Number of extensions: 7406645
Number of successful extensions: 145447
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 145234
Number of HSP's gapped (non-prelim): 207
length of query: 742
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 719
effective length of database: 17,143,297,704
effective search space: 12326031049176
effective search space used: 12326031049176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 21 (42.1 bits)

---