Clone Name | rbasd13d08 |
---|---|
Clone Library Name | barley_pub |
>ABIL3_ORYSA (Q5NB83) Probable protein ABIL3 (Abl interactor-like protein 3)| Length = 317 Score = 30.8 bits (68), Expect = 4.4 Identities = 11/22 (50%), Positives = 18/22 (81%) Frame = +2 Query: 119 KQSDLQHRRTPSPSSQNTHHKS 184 +QS ++ R+PSPS++ THH+S Sbjct: 191 RQSTMRSARSPSPSARGTHHRS 212
>PNMT_MOUSE (P40935) Phenylethanolamine N-methyltransferase (EC 2.1.1.28)| (PNMTase) (Noradrenaline N-methyltransferase) Length = 295 Score = 30.8 bits (68), Expect = 4.4 Identities = 16/36 (44%), Positives = 20/36 (55%) Frame = +3 Query: 516 ATGSPSRPKFVPEHDPPADSGIFSLEDRYPSFESTA 623 ATGS S PK E DP +D+G ++ Y FE A Sbjct: 10 ATGSGSDPKHAAEMDPDSDAGQVAVALAYQRFEPRA 45
>CH10_LACHE (O68323) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 30.4 bits (67), Expect = 5.8 Identities = 24/78 (30%), Positives = 33/78 (42%), Gaps = 10/78 (12%) Frame = -1 Query: 727 DAETVTAKDASESLADSFIDTVRKLQSNNK---TQGEAAVLSKDGYRSSKEKIPLSAG-- 563 D V KD E + L SN K T+GE + + Y S+ EKIP+S Sbjct: 7 DRVIVKVKDEEEKTVGGIV-----LASNAKKKPTEGEVVAVGEGAYASNGEKIPMSVKKG 61 Query: 562 -----GSCSGTNLGLDGD 524 SGTN+ +G+ Sbjct: 62 DVVLYDRYSGTNVEYEGE 79
>PHOL_SHIFL (P0A9K6) PhoH-like protein| Length = 359 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 675 LLTL*GSFSQTIRLKERLRCSQRMGIDLPRRRSHYQLEGHAL 550 LL+L G F I+ ER R+GI++ RR +H++L G + Sbjct: 31 LLSLCGPFDDNIKQLER-----RLGIEINRRDNHFKLTGRPI 67
>PHOL_ECOLI (P0A9K3) PhoH-like protein| Length = 359 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 675 LLTL*GSFSQTIRLKERLRCSQRMGIDLPRRRSHYQLEGHAL 550 LL+L G F I+ ER R+GI++ RR +H++L G + Sbjct: 31 LLSLCGPFDDNIKQLER-----RLGIEINRRDNHFKLTGRPI 67
>PHOL_ECOL6 (P0A9K4) PhoH-like protein| Length = 359 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 675 LLTL*GSFSQTIRLKERLRCSQRMGIDLPRRRSHYQLEGHAL 550 LL+L G F I+ ER R+GI++ RR +H++L G + Sbjct: 31 LLSLCGPFDDNIKQLER-----RLGIEINRRDNHFKLTGRPI 67
>PHOL_ECO57 (P0A9K5) PhoH-like protein| Length = 359 Score = 30.0 bits (66), Expect = 7.6 Identities = 16/42 (38%), Positives = 25/42 (59%) Frame = -2 Query: 675 LLTL*GSFSQTIRLKERLRCSQRMGIDLPRRRSHYQLEGHAL 550 LL+L G F I+ ER R+GI++ RR +H++L G + Sbjct: 31 LLSLCGPFDDNIKQLER-----RLGIEINRRDNHFKLTGRPI 67
>PFDA_THEVO (Q97BC5) Prefoldin alpha subunit (GimC alpha subunit)| Length = 130 Score = 30.0 bits (66), Expect = 7.6 Identities = 19/56 (33%), Positives = 27/56 (48%) Frame = -1 Query: 691 SLADSFIDTVRKLQSNNKTQGEAAVLSKDGYRSSKEKIPLSAGGSCSGTNLGLDGD 524 S D+ ID + K+ + Q +LS D R SKE++ G + NL LD D Sbjct: 17 SSVDAQIDAINKMVL--EVQTTIQILSSDELRQSKERLISVGSGIFANGNLDLDSD 70
>SALM_DROME (P39770) Homeotic protein spalt-major| Length = 1365 Score = 30.0 bits (66), Expect = 7.6 Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 3/43 (6%) Frame = +2 Query: 86 EVFNQQNRIRLKQSDLQHRRTPSPSSQNT---HHKSVHIYCQP 205 E +Q +++ + ++ RRTPSPSS++ HH+ H+ P Sbjct: 643 ERVEEQEQVKQEDHRIEPRRTPSPSSEHRSPHHHRHSHMGYPP 685
>YAV8_SCHPO (Q10177) Hypothetical protein C27F1.08 in chromosome I| Length = 521 Score = 30.0 bits (66), Expect = 7.6 Identities = 15/28 (53%), Positives = 18/28 (64%) Frame = -1 Query: 178 VMCVLAAWRRRPSMLEVALFESNSVLLV 95 V+ VL AWR SML V +FE+ LLV Sbjct: 192 VLLVLIAWRPEGSMLSVRIFETAVALLV 219
>PKDRE_MOUSE (Q9Z0T6) Polycystic kidney disease and receptor for egg jelly-related| protein precursor (PKD and REJ homolog) Length = 2126 Score = 30.0 bits (66), Expect = 7.6 Identities = 14/45 (31%), Positives = 25/45 (55%) Frame = -2 Query: 492 VGMWARVEEXXXXXXATNNQRRRRSFSELGWVTTHWLHLILVILM 358 + M+ + E N+ RRRSF L ++ TH++ L L++L+ Sbjct: 1556 LSMYQPITEDKIQILRRENRIRRRSFLFLSYLVTHFIFLTLLLLL 1600
>CH103_BRAJA (P35864) 10 kDa chaperonin 3 (Protein Cpn10 3) (groES protein 3)| Length = 104 Score = 29.6 bits (65), Expect = 9.9 Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 9/85 (10%) Frame = -1 Query: 727 DAETVTAKDASESLADSFI--DTVRKLQSNNKTQGEAAVLSKDGYRSSKEKIPLSAG--- 563 D V DA E A I DT ++ S QGE + G+ S + IP+ Sbjct: 8 DRVVVKRIDAEEKTAGGIIIPDTAKEKPS----QGEVIAVGPGGHDDSGKLIPIDIEVGD 63 Query: 562 ----GSCSGTNLGLDGDPVAISKAS 500 G SGT + +DG + I K S Sbjct: 64 RVLFGKWSGTEVKIDGQDLLIMKES 88 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 100,610,862 Number of Sequences: 219361 Number of extensions: 2026891 Number of successful extensions: 5467 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 5306 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5467 length of database: 80,573,946 effective HSP length: 109 effective length of database: 56,663,597 effective search space used: 7479594804 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)