Clone Name | rbasd13c24 |
---|---|
Clone Library Name | barley_pub |
>gb|AY123421.1| Triticum aestivum putative plastid ribosomal protein CL9 mRNA, complete cds Length = 767 Score = 751 bits (379), Expect = 0.0 Identities = 421/435 (96%) Strand = Plus / Minus Query: 241 gctcacttggcatacacagtcagcctcaccttggctgtgacgtcggggtggagcttgatc 300 |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 587 gctcacttggtatacacagtcagcctcaccttggctgtgacgtcggggtggagcttgatc 528 Query: 301 tccgcgacgtactccccgacctcgcggatctccgggacctccaccagccgcttgtccacg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 527 tccgcgacgtactccccgacctcgcggatctccgggacctccaccagccgcttgtccacg 468 Query: 361 tccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgctcccgaag 420 |||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||| Sbjct: 467 tccctgttaagctgcgacttgatgatgtcgacgagatcttgcgccgtgacgctcccgaag 408 Query: 421 atctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtttcgaagact 480 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||| Sbjct: 407 atctgctttcctttgccacctttacgtggcaccttgaacgccccaatggtttcgaagact 348 Query: 481 cgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcgattctctcctgc 540 || |||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 347 cgcgcgagttgctgtgcctcttcttttaccctcttcttctcagcctcgattctctcctgc 288 Query: 541 tccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttgcccttggggagc 600 |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 287 tccagttgcatttccttgaggacgtcgggggtgagcagcgtggccttgcccttggggagc 228 Query: 601 aggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttcttgccgcttatc 660 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 227 aggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttcttgccgctaatc 168 Query: 661 tcgtcgatgtcgtcc 675 || |||||||||||| Sbjct: 167 tcatcgatgtcgtcc 153 Score = 216 bits (109), Expect = 7e-53 Identities = 159/174 (91%), Gaps = 5/174 (2%) Strand = Plus / Minus Query: 39 tgaacaaaaaaggatttgacatattcacttgataaaagattcaacagcattcgctttctc 98 ||||||||||||||||| | ||||||||||| |||| ||||||||| ||||||||||| Sbjct: 760 tgaacaaaaaaggatttcatatattcacttg-taaatatttcaacagctttcgctttctc 702 Query: 99 cccgcttctcctaatgtatacaaggccatgaacaacatttttgtaaaacccatcctc--- 155 | |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 701 cacgcttctcctaatgcatacaaggccatgaacaacatttttgtaaaacccatcctctat 642 Query: 156 -gctcccaggcacaaccgttgcaggatgttcggagtatatggcgagatcagact 208 ||||||||||||||| ||||||||| ||||||||||||||||||||||||||| Sbjct: 641 agctcccaggcacaacagttgcaggacgttcggagtatatggcgagatcagact 588
>ref|XM_468458.1| Oryza sativa (japonica cultivar-group), mRNA Length = 888 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 479 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 420 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 419 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 360 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 359 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 300 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 299 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 240 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 239 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 180 Query: 649 tt 650 || Sbjct: 179 tt 178
>ref|XM_507552.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_A01.21-1 mRNA Length = 892 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 483 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 424 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 423 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 364 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 363 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 304 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 303 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 244 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 243 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 184 Query: 649 tt 650 || Sbjct: 183 tt 182
>ref|XM_507062.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_A01.21-1 mRNA Length = 897 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 476 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 417 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 416 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 357 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 356 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 297 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 296 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 237 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 236 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 177 Query: 649 tt 650 || Sbjct: 176 tt 175
>dbj|AK104610.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C08, full insert sequence Length = 888 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 479 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 420 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 419 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 360 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 359 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 300 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 299 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 240 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 239 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 180 Query: 649 tt 650 || Sbjct: 179 tt 178
>dbj|AK071751.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023111I07, full insert sequence Length = 892 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 483 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 424 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 423 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 364 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 363 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 304 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 303 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 244 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 243 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 184 Query: 649 tt 650 || Sbjct: 183 tt 182
>dbj|AK058369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-G04, full insert sequence Length = 897 Score = 258 bits (130), Expect = 2e-65 Identities = 259/302 (85%) Strand = Plus / Minus Query: 349 cgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtg 408 |||||||| || ||||| ||||| |||||||| |||||||| | |||||||| |||||| Sbjct: 476 cgcttgtcgacatccctattaagttgtgactttatgatgtcaacaagatcttgtgctgtg 417 Query: 409 acgctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatg 468 |||||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || Sbjct: 416 acgctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaata 357 Query: 469 gtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctcttcttttcagcctcg 528 ||||| || || || || ||||| ||||||||||||||||||| |||||||||||| || Sbjct: 356 gtttcaaaaacacgggcaagttgctgtgcctcttcttttacccgcttcttttcagcatct 297 Query: 529 attctctcctgctccaattgcatttccttgaggacgtcgggggtgagcagtgtggccttg 588 || |||||||| || | ||||||||||||||| || || ||||||||||| || |||||| Sbjct: 296 atcctctcctgttctacttgcatttccttgagtacttctggggtgagcagcgttgccttg 237 Query: 589 cccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcccccttc 648 ||||| || || ||||||||||||||||||||||||| || || | ||||||||| ||| Sbjct: 236 ccctttggcagaaggaagttgcggtagaacccggccctcactttaagcgtgtcccctttc 177 Query: 649 tt 650 || Sbjct: 176 tt 175
>gb|BT018060.1| Zea mays clone EL01N0532F02.c mRNA sequence Length = 967 Score = 208 bits (105), Expect = 2e-50 Identities = 297/361 (82%) Strand = Plus / Minus Query: 274 gctgtgacgtcggggtggagcttgatctccgcgacgtactccccgacctcgcggatctcc 333 ||||| ||||| ||||| ||||||||||| || || ||||| |||| || ||||| || Sbjct: 625 gctgtcacgtctgggtgaagcttgatctctgcaacatactctccgatttcacggatttct 566 Query: 334 gggacctccaccagccgcttgtccacgtccctgttaagctgtgacttgatgatgtcgatg 393 || ||| ||||||| |||||| || ||||| ||||| |||||||| || ||||| | Sbjct: 565 ggaaccgtcaccagcttcttgtcgacatccctattaagttgtgactttattatgtcaaca 506 Query: 394 agatcttgagctgtgacgctcccgaagatctgctttcctttgccacctttacgtggcacc 453 | ||| || || ||||| ||||| |||||||| |||||||| |||||||| || || | Sbjct: 505 acatcctgtgccgtgacactcccaaagatctgttttccttttccacctttgcgagggagt 446 Query: 454 ttgaatgccccgatggtttcgaagactcgtgcgagttgttgtgcctcttcttttaccctc 513 ||||| || || |||||||| || ||||| || |||||||| || ||||||||||||| | Sbjct: 445 ttgaaagcgccaatggtttcaaaaactcgagcaagttgttgcgcgtcttcttttacccgc 386 Query: 514 ttcttttcagcctcgattctctcctgctccaattgcatttccttgaggacgtcgggggtg 573 ||||||||||| || |||||||||||||||| ||||||||||||||||| || ||||| Sbjct: 385 ttcttttcagcttctattctctcctgctccagctgcatttccttgaggacttctggggtc 326 Query: 574 agcagtgtggccttgcccttggggagcaggaagttgcggtagaacccggcccggaccttc 633 || ||||| |||||||||||||| || ||||||||||||||||| || || || |||||| Sbjct: 325 agaagtgtagccttgcccttgggaaggaggaagttgcggtagaatccagctcgcaccttc 266 Query: 634 a 634 | Sbjct: 265 a 265
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 412 ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 471 ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 35339754 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 35339813 Query: 472 tcgaagactcgtgcgagttgttgtgcctcttcttttacc 510 || || || || || ||||| |||||||||||||||||| Sbjct: 35339814 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 35339852 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 555 cttgaggacgtcgggggtgagcagtgtggccttgcccttggggagcaggaagttgcggta 614 |||||| || || ||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 35340516 cttgagtacttctggggtgagcagcgttgccttgccctttggcagaaggaagttgcggta 35340575 Query: 615 gaacccggcccggaccttcatcgtgtcccccttctt 650 ||||||||||| || || | ||||||||| ||||| Sbjct: 35340576 gaacccggccctcactttaagcgtgtcccctttctt 35340611 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 367 ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 413 ||||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 35339625 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 35339671 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 506 ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 555 |||||| |||||||||||| || || |||||||| || | |||||||||| Sbjct: 35340117 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 35340166
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 412 ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 471 ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 90088 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 90147 Query: 472 tcgaagactcgtgcgagttgttgtgcctcttcttttacc 510 || || || || || ||||| |||||||||||||||||| Sbjct: 90148 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 90186 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 555 cttgaggacgtcgggggtgagcagtgtggccttgcccttggggagcaggaagttgcggta 614 |||||| || || ||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 90850 cttgagtacttctggggtgagcagcgttgccttgccctttggcagaaggaagttgcggta 90909 Query: 615 gaacccggcccggaccttcatcgtgtcccccttctt 650 ||||||||||| || || | ||||||||| ||||| Sbjct: 90910 gaacccggccctcactttaagcgtgtcccctttctt 90945 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 367 ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 413 ||||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 89959 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 90005 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 506 ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 555 |||||| |||||||||||| || || |||||||| || | |||||||||| Sbjct: 90451 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 90500
>dbj|AP004026.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1136_C04 Length = 103194 Score = 93.7 bits (47), Expect = 7e-16 Identities = 86/99 (86%) Strand = Plus / Plus Query: 412 ctcccgaagatctgctttcctttgccacctttacgtggcaccttgaatgccccgatggtt 471 ||||| || ||||| |||||||| ||||||||||||||||| ||||||||||| || ||| Sbjct: 302 ctcccaaatatctgttttcctttcccacctttacgtggcactttgaatgccccaatagtt 361 Query: 472 tcgaagactcgtgcgagttgttgtgcctcttcttttacc 510 || || || || || ||||| |||||||||||||||||| Sbjct: 362 tcaaaaacacgggcaagttgctgtgcctcttcttttacc 400 Score = 79.8 bits (40), Expect = 1e-11 Identities = 82/96 (85%) Strand = Plus / Plus Query: 555 cttgaggacgtcgggggtgagcagtgtggccttgcccttggggagcaggaagttgcggta 614 |||||| || || ||||||||||| || ||||||||||| || || |||||||||||||| Sbjct: 1064 cttgagtacttctggggtgagcagcgttgccttgccctttggcagaaggaagttgcggta 1123 Query: 615 gaacccggcccggaccttcatcgtgtcccccttctt 650 ||||||||||| || || | ||||||||| ||||| Sbjct: 1124 gaacccggccctcactttaagcgtgtcccctttctt 1159 Score = 46.1 bits (23), Expect = 0.15 Identities = 41/47 (87%) Strand = Plus / Plus Query: 367 ttaagctgtgacttgatgatgtcgatgagatcttgagctgtgacgct 413 ||||| |||||||| |||||||| | |||||||| ||||||||||| Sbjct: 173 ttaagttgtgactttatgatgtcaacaagatcttgtgctgtgacgct 219 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Plus Query: 506 ttaccctcttcttttcagcctcgattctctcctgctccaattgcatttcc 555 |||||| |||||||||||| || || |||||||| || | |||||||||| Sbjct: 665 ttacccgcttcttttcagcatctatcctctcctgttctacttgcatttcc 714
>ref|NM_114358.2| Arabidopsis thaliana RPL9; structural constituent of ribosome AT3G44890 (RPL9) mRNA, complete cds Length = 919 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 537 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 497 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttttaccct 512 |||||||||||||||||||| ||||| Sbjct: 420 agttgttgtgcctcttctttcaccct 395
>gb|BT000914.1| Arabidopsis thaliana clone C105211 putative RP19 gene for chloroplast ribosomal protein CL9 (At3g44890) mRNA, complete cds Length = 625 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 467 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 427 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttttaccct 512 |||||||||||||||||||| ||||| Sbjct: 350 agttgttgtgcctcttctttcaccct 325
>gb|AY064028.1| Arabidopsis thaliana At3g44890 mRNA sequence Length = 901 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 535 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 495 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttttaccct 512 |||||||||||||||||||| ||||| Sbjct: 418 agttgttgtgcctcttctttcaccct 393
>emb|Z11129.1|ATRPCL9 Arabidopsis thaliana mRNA for plastid ribosomal protein CL9 (rpl9 gene) Length = 858 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 476 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 436 Score = 44.1 bits (22), Expect = 0.59 Identities = 25/26 (96%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttttaccct 512 |||||||||||||||||||| ||||| Sbjct: 359 agttgttgtgcctcttctttcaccct 334
>emb|Z11509.1|ATRPCL9G A.thaliana rp19 gene for chloroplast ribosomal protein CL9 Length = 2737 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 1813 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 1773 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttt 506 |||||||||||||||||||| Sbjct: 1613 agttgttgtgcctcttcttt 1594
>emb|AL391254.2|ATF28D10 Arabidopsis thaliana DNA chromosome 3, BAC clone F28D10 Length = 49890 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 |||||||| ||||||||||||| ||| |||||||||||||| Sbjct: 28290 agctgtgatttgatgatgtcgacgaggtcttgagctgtgac 28250 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 487 agttgttgtgcctcttcttt 506 |||||||||||||||||||| Sbjct: 28090 agttgttgtgcctcttcttt 28071
>gb|BT016272.1| Zea mays clone Contig105 mRNA sequence Length = 1436 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Minus Query: 583 gccttgcccttggggagcaggaagttgcggtagaacccggcccggaccttcatcgtgtcc 642 |||||||||||||| |||| | ||||||||||||| || || || |||||||| || ||| Sbjct: 249 gccttgcccttgggaagcaaggagttgcggtagaatccagctcgcaccttcattgtatcc 190 Query: 643 cccttctt 650 || ||||| Sbjct: 189 cctttctt 182
>gb|AY085173.1| Arabidopsis thaliana clone 13554 mRNA, complete sequence Length = 870 Score = 50.1 bits (25), Expect = 0.010 Identities = 37/41 (90%) Strand = Plus / Minus Query: 370 agctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 ||||| || ||||||||||||| ||| |||||||||||||| Sbjct: 518 agctgcgatttgatgatgtcgacgaggtcttgagctgtgac 478
>gb|AY109726.1| Zea mays CL8519_1 mRNA sequence Length = 1183 Score = 46.1 bits (23), Expect = 0.15 Identities = 32/35 (91%) Strand = Plus / Plus Query: 583 gccttgcccttggggagcaggaagttgcggtagaa 617 |||||||||||||| |||| | ||||||||||||| Sbjct: 1114 gccttgcccttgggaagcaaggagttgcggtagaa 1148
>gb|AC126007.16| Medicago truncatula clone mth2-11o4, complete sequence Length = 106747 Score = 44.1 bits (22), Expect = 0.59 Identities = 43/50 (86%) Strand = Plus / Minus Query: 415 ccgaagatctgctttcctttgccacctttacgtggcaccttgaatgcccc 464 |||||||| || |||||||| ||||||||||| ||||||||| ||||| Sbjct: 29892 ccgaagatttgttttcctttaccacctttacgcttcaccttgaaagcccc 29843
>gb|CP000321.1| Nitrobacter hamburgensis X14 plasmid 2, complete sequence Length = 188318 Score = 44.1 bits (22), Expect = 0.59 Identities = 22/22 (100%) Strand = Plus / Plus Query: 542 ccaattgcatttccttgaggac 563 |||||||||||||||||||||| Sbjct: 182824 ccaattgcatttccttgaggac 182845
>ref|XM_612739.2| PREDICTED: Bos taurus similar to cytochrome P450, family 2, subfamily A, polypeptide 13 (LOC540707), mRNA Length = 1361 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 587 tgcccttggggagcaggaagt 607 ||||||||||||||||||||| Sbjct: 1173 tgcccttggggagcaggaagt 1153
>emb|X14019.1|PSRPCL9 Pea mRNA for plastid ribosomal protein CL9 Length = 901 Score = 42.1 bits (21), Expect = 2.3 Identities = 75/93 (80%) Strand = Plus / Minus Query: 351 cttgtccacgtccctgttaagctgtgacttgatgatgtcgatgagatcttgagctgtgac 410 ||||||||| ||||| | ||| |||| ||| || ||||| | ||||||||||| || || Sbjct: 487 cttgtccacctccctttgaagttgtgcctttattatgtccacaagatcttgagccgtaac 428 Query: 411 gctcccgaagatctgctttcctttgccaccttt 443 || || || ||||| |||||||| |||||||| Sbjct: 427 acttccaaatatctgttttcctttaccaccttt 395
>emb|CR318586.3| Zebrafish DNA sequence from clone CH211-239O22 in linkage group 7, complete sequence Length = 30205 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 83 cagcattcgctttctccccgcttct 107 ||||||||||||||||||| ||||| Sbjct: 9247 cagcattcgctttctccccccttct 9223
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ttcttttaccctcttcttttc 521 ||||||||||||||||||||| Sbjct: 1056358 ttcttttaccctcttcttttc 1056338
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome Length = 3147090 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 373 tgtgacttgatgatgtcgatg 393 ||||||||||||||||||||| Sbjct: 1067353 tgtgacttgatgatgtcgatg 1067333
>dbj|AP002541.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0494A10 Length = 145576 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ttcttttaccctcttcttttc 521 ||||||||||||||||||||| Sbjct: 94026 ttcttttaccctcttcttttc 94006
>dbj|AP002868.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0698A04 Length = 141079 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 501 ttcttttaccctcttcttttc 521 ||||||||||||||||||||| Sbjct: 25672 ttcttttaccctcttcttttc 25652
>emb|AL732455.6| Zebrafish DNA sequence from clone CH211-225J17 in linkage group 7, complete sequence Length = 192578 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 cagcattcgctttctccccgcttct 107 ||||||||||||||||||| ||||| Sbjct: 56677 cagcattcgctttctccccccttct 56701
>emb|CT476810.5| Zebrafish DNA sequence from clone ZFOS-260D6 in linkage group 7, complete sequence Length = 19313 Score = 42.1 bits (21), Expect = 2.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 83 cagcattcgctttctccccgcttct 107 ||||||||||||||||||| ||||| Sbjct: 10067 cagcattcgctttctccccccttct 10091
>gb|AC164541.3| Mus musculus chromosome 1, clone RP24-172N7, complete sequence Length = 161969 Score = 42.1 bits (21), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 8 tttatttagcaaaatgggtnctgc 31 ||||||||||||||||||| |||| Sbjct: 56033 tttatttagcaaaatgggttctgc 56056
>gb|AC105073.16| Mus musculus chromosome 1, clone RP23-288J11, complete sequence Length = 210509 Score = 42.1 bits (21), Expect = 2.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 8 tttatttagcaaaatgggtnctgc 31 ||||||||||||||||||| |||| Sbjct: 29871 tttatttagcaaaatgggttctgc 29848
>emb|AL808017.4| Mouse DNA sequence from clone RP23-145G21 on chromosome X, complete sequence Length = 183291 Score = 42.1 bits (21), Expect = 2.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 424 tgctttcctttgccaccttta 444 ||||||||||||||||||||| Sbjct: 165043 tgctttcctttgccaccttta 165063
>gb|AC091499.2| Drosophila melanogaster clone BACR33L22, complete sequence Length = 182105 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacatttttgtaaaacccat 151 |||||||||||||||||||| Sbjct: 100012 aacatttttgtaaaacccat 99993
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 600 caggaagttgcggtagaacc 619 |||||||||||||||||||| Sbjct: 1956926 caggaagttgcggtagaacc 1956907
>gb|AY460197.1| Notropis mekistocholas clone CFS15F2 microsatellite sequence Length = 539 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 caacaaatgaacaaaaaagg 51 |||||||||||||||||||| Sbjct: 205 caacaaatgaacaaaaaagg 224
>gb|AC120402.10| Mus musculus chromosome 12, clone RP24-354N2, complete sequence Length = 122843 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 418 aagatctgctttcctttgcc 437 |||||||||||||||||||| Sbjct: 77778 aagatctgctttcctttgcc 77759
>ref|NM_017781.2| Homo sapiens cytochrome P450, family 2, subfamily W, polypeptide 1 (CYP2W1), mRNA Length = 2354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tgcccttggggagcaggaag 606 |||||||||||||||||||| Sbjct: 1160 tgcccttggggagcaggaag 1141
>gb|AC123976.23| Medicago truncatula clone mth2-30j23, complete sequence Length = 112917 Score = 40.1 bits (20), Expect = 9.2 Identities = 26/28 (92%) Strand = Plus / Minus Query: 520 tcagcctcgattctctcctgctccaatt 547 |||| |||||||||||||||| |||||| Sbjct: 77564 tcagactcgattctctcctgccccaatt 77537
>emb|AL354943.9| Human DNA sequence from clone RP11-160A9 on chromosome 6 Contains a solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator) member 6 (SLC25A6) pseudogene, an NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1 (8kD, SDAP) (NDUFAB1) pseudogene, the 5' end of the gene for stromal membrane-associated protein SMAP1 and a CpG island, complete sequence Length = 151445 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 36 aaatgaacaaaaaaggatttgaca 59 ||||||||||||||| |||||||| Sbjct: 80466 aaatgaacaaaaaagcatttgaca 80489
>emb|AL139379.14| Human DNA sequence from clone RP11-358P11 on chromosome 13 Contains a CpG island, complete sequence Length = 166237 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 42 acaaaaaaggatttgacata 61 |||||||||||||||||||| Sbjct: 55683 acaaaaaaggatttgacata 55664
>emb|BX571680.7| Zebrafish DNA sequence from clone DKEY-30L20 in linkage group 7, complete sequence Length = 145338 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaaaaaggatttgacatatt 63 |||||||||||||||||||| Sbjct: 55372 aaaaaaggatttgacatatt 55353
>emb|AL592465.8| Mouse DNA sequence from clone RP23-36C4 on chromosome 11 Contains the Tbx4 gene for T-box 4, a ribosomal protein L21 (Rpl21) pseudogene and the 3' end of the Brip1 gene for BRCA1 interacting protein C-terminal helicase 1, complete sequence Length = 238358 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 tgccaacaaatgaacaaaaaagga 52 |||||| ||||||||||||||||| Sbjct: 131449 tgccaagaaatgaacaaaaaagga 131426
>emb|CR599457.1| full-length cDNA clone CS0DB002YI20 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1694 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tgcccttggggagcaggaag 606 |||||||||||||||||||| Sbjct: 469 tgcccttggggagcaggaag 450
>gb|AC012295.20| Mus musculus chromosome 11, clone RP23-48A17, complete sequence Length = 187364 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 29 tgccaacaaatgaacaaaaaagga 52 |||||| ||||||||||||||||| Sbjct: 184895 tgccaagaaatgaacaaaaaagga 184872
>dbj|AB229835.1| Aspergillus oryzae cDNA, contig sequence: AoEST6719 Length = 269 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 516 cttttcagcctcgattctctcctg 539 |||||||||||||||| ||||||| Sbjct: 163 cttttcagcctcgattttctcctg 140
>dbj|AP007164.1| Aspergillus oryzae RIB40 genomic DNA, SC111 Length = 2356219 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 516 cttttcagcctcgattctctcctg 539 |||||||||||||||| ||||||| Sbjct: 618455 cttttcagcctcgattttctcctg 618478
>gb|AC008820.6| Homo sapiens chromosome 5 clone CTD-2127F10, complete sequence Length = 59624 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aacaaatgaacaaaaaagga 52 |||||||||||||||||||| Sbjct: 15797 aacaaatgaacaaaaaagga 15816
>gb|BC025761.1| Homo sapiens cytochrome P450, family 2, subfamily W, polypeptide 1, mRNA (cDNA clone MGC:34287 IMAGE:5204155), complete cds Length = 2354 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tgcccttggggagcaggaag 606 |||||||||||||||||||| Sbjct: 1160 tgcccttggggagcaggaag 1141
>dbj|AK040098.1| Mus musculus 0 day neonate thymus cDNA, RIKEN full-length enriched library, clone:A430059N17 product:unclassifiable, full insert sequence Length = 723 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 418 aagatctgctttcctttgcc 437 |||||||||||||||||||| Sbjct: 245 aagatctgctttcctttgcc 264
>gb|AC016722.9| Homo sapiens BAC clone RP11-333I13 from 2, complete sequence Length = 149995 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 30 gccaacaaatgaacaaaaaa 49 |||||||||||||||||||| Sbjct: 53799 gccaacaaatgaacaaaaaa 53780
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 332 ccgggacctccaccagccgc 351 |||||||||||||||||||| Sbjct: 2270695 ccgggacctccaccagccgc 2270714
>gb|AC171014.3| Gallus gallus BAC clone CH261-89A18 from chromosome ul, complete sequence Length = 181265 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 atttatttagcaaaatgggt 26 |||||||||||||||||||| Sbjct: 35565 atttatttagcaaaatgggt 35546
>dbj|AK189711.1| Mus musculus cDNA, clone:Y0G0150D04, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000028347, based on BLAT search Length = 436 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 422 tctgctttcctttgccacct 441 |||||||||||||||||||| Sbjct: 248 tctgctttcctttgccacct 229
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 320 cctcgcggatctccgggacc 339 |||||||||||||||||||| Sbjct: 3947119 cctcgcggatctccgggacc 3947100
>emb|BX005043.8| Zebrafish DNA sequence from clone DKEY-3E19 in linkage group 14, complete sequence Length = 238499 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 gcttctcctaatgtatacaa 121 |||||||||||||||||||| Sbjct: 27669 gcttctcctaatgtatacaa 27650
>dbj|AK000366.1| Homo sapiens cDNA FLJ20359 fis, clone HEP16626 Length = 2384 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 587 tgcccttggggagcaggaag 606 |||||||||||||||||||| Sbjct: 1001 tgcccttggggagcaggaag 982
>emb|CR318601.8| Zebrafish DNA sequence from clone CH211-274E20 in linkage group 7, complete sequence Length = 165501 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 44 aaaaaaggatttgacatatt 63 |||||||||||||||||||| Sbjct: 131842 aaaaaaggatttgacatatt 131823
>gb|AC007453.1|AC007453 Drosophila melanogaster, chromosome 2R, region 49C1-49D3, P1 clones DS04499, DS06146, and DS00455, complete sequence Length = 145055 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacatttttgtaaaacccat 151 |||||||||||||||||||| Sbjct: 136775 aacatttttgtaaaacccat 136756
>gb|AE003820.3| Drosophila melanogaster chromosome 2R, section 30 of 73 of the complete sequence Length = 263912 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 132 aacatttttgtaaaacccat 151 |||||||||||||||||||| Sbjct: 20987 aacatttttgtaaaacccat 20968
>emb|BX088570.6| Mouse DNA sequence from clone RP23-292J1 on chromosome 4, complete sequence Length = 244187 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 aatgaacaaaaaaggatttg 56 |||||||||||||||||||| Sbjct: 202493 aatgaacaaaaaaggatttg 202474
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 9.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 310 tactccccgacctcgcggatctcc 333 ||||||||| |||||||||||||| Sbjct: 3563922 tactccccgtcctcgcggatctcc 3563945
>dbj|AP004935.1| Lotus japonicus genomic DNA, chromosome 5, clone:LjT02L13, TM0095b, complete sequence Length = 6348 Score = 40.1 bits (20), Expect = 9.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aatttatttagcaaaatggg 25 |||||||||||||||||||| Sbjct: 1525 aatttatttagcaaaatggg 1506 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,713,918 Number of Sequences: 3902068 Number of extensions: 5713918 Number of successful extensions: 121662 Number of sequences better than 10.0: 64 Number of HSP's better than 10.0 without gapping: 64 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 121242 Number of HSP's gapped (non-prelim): 417 length of query: 676 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 653 effective length of database: 17,143,297,704 effective search space: 11194573400712 effective search space used: 11194573400712 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)