Clone Name | rbasd13c17 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11... | 33 | 0.27 | 2 | APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.1... | 32 | 0.60 | 3 | APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11... | 30 | 1.8 | 4 | APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1... | 30 | 2.3 |
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>APX1_ORYSA (P93404) L-ascorbate peroxidase 1, cytosolic (EC 1.11.1.11) (APXa)| Length = 249 Score = 32.7 bits (73), Expect = 0.27 Identities = 14/17 (82%), Positives = 16/17 (94%) Frame = -3 Query: 186 DYKEAHLRLSELGXAEA 136 DYKEAHL+LSELG A+A Sbjct: 233 DYKEAHLKLSELGFADA 249
>APX1_PEA (P48534) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 31.6 bits (70), Expect = 0.60 Identities = 14/17 (82%), Positives = 15/17 (88%) Frame = -3 Query: 186 DYKEAHLRLSELGXAEA 136 DY EAHL+LSELG AEA Sbjct: 233 DYAEAHLKLSELGFAEA 249
>APX2_ORYSA (Q9FE01) L-ascorbate peroxidase 2, cytosolic (EC 1.11.1.11) (APXb)| Length = 251 Score = 30.0 bits (66), Expect = 1.8 Identities = 13/16 (81%), Positives = 14/16 (87%) Frame = -3 Query: 186 DYKEAHLRLSELGXAE 139 DY EAHL+LSELG AE Sbjct: 235 DYAEAHLKLSELGFAE 250
>APX1_ARATH (Q05431) L-ascorbate peroxidase, cytosolic (EC 1.11.1.11) (AP)| Length = 249 Score = 29.6 bits (65), Expect = 2.3 Identities = 12/17 (70%), Positives = 15/17 (88%) Frame = -3 Query: 186 DYKEAHLRLSELGXAEA 136 DY EAH++LSELG A+A Sbjct: 233 DYAEAHMKLSELGFADA 249 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,764,098 Number of Sequences: 219361 Number of extensions: 201931 Number of successful extensions: 506 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 504 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 506 length of database: 80,573,946 effective HSP length: 38 effective length of database: 72,238,228 effective search space used: 1733717472 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)