ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13c05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 dis... 66 2e-07
2gb|AF277252.1|AF277252 Australopyrum pectinatum isolate H6771 di... 66 2e-07
3gb|AF277251.1|AF277251 Australopyrum retrofractum isolate H6723 ... 66 2e-07
4gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 66 2e-07
5gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN... 66 2e-07
6gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN... 66 2e-07
7dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox ... 64 6e-07
8emb|CR626933.1| Triticum turgidum 62 2e-06
9emb|CR626929.1| Triticum aestivum 62 2e-06
10gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14... 60 1e-05
11gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 60 1e-05
12emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene 60 1e-05
13gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) g... 60 1e-05
14gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) g... 60 1e-05
15gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) g... 60 1e-05
16gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A1... 60 1e-05
17gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254... 56 1e-04
18emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene 54 6e-04
19emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase 52 0.002
20emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B r... 52 0.002
21emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAR... 52 0.002
22gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carbo... 52 0.002
23gb|AY133248.1| Aegilops tauschii starch synthase II gene, comple... 50 0.009
24gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruva... 50 0.009
25emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroi... 50 0.009
26dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch syntha... 50 0.009
27dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP typ... 50 0.009
28gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carbo... 50 0.009
29gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 48 0.037
30emb|CR626934.1| Triticum aestivum 48 0.037
31dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.037
32gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome... 48 0.037
33gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1... 48 0.037
34gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspa... 46 0.14
35gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156... 46 0.14
36gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence 46 0.14
37gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxyl... 44 0.57
38gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence 44 0.57
39emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodi... 44 0.57
40gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones B... 42 2.3
41gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete se... 42 2.3
42emb|CR626926.1| Aegilops tauschii 42 2.3
43emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete ge... 42 2.3
44emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
45emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4,... 42 2.3
46gb|AC124046.2| Homo sapiens chromosome 3 clone RP11-352B8, compl... 42 2.3
47gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, gen... 42 2.3
48dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.3
49gb|AC008732.9| Homo sapiens chromosome 16 clone CTD-2519M14, com... 42 2.3
50gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC... 42 2.3
51gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR c... 42 2.3
52gb|AC154378.2| Mus musculus BAC clone RP23-64O5 from 17, complet... 42 2.3
53gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Can... 42 2.3
54gb|AC007870.3|AC007870 Genomic sequence for Homo sapiens clone 4... 42 2.3
55emb|AJ852539.1| Triticum aestivum ltp9.3d gene for type 1 non sp... 42 2.3
56gb|DQ288986.1| Cucumis melo putative alcohol dehydrogenases (ADH... 42 2.3
57gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
58gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 compl... 40 8.9
59gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
60gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) g... 40 8.9
61gb|AC024876.1| Caenorhabditis elegans cosmid Y94H6A, complete se... 40 8.9
62gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome... 40 8.9
63emb|Z93396.1|CEZC15 Caenorhabditis elegans Cosmid ZC15, complete... 40 8.9
64emb|AL022164.1|HS581F7 Human DNA sequence from clone RP4-581F7 o... 40 8.9
65emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 40 8.9
66gb|AC158132.6| Mus musculus chromosome 1, clone RP23-11K8, compl... 40 8.9
67gb|AC008249.14| Homo sapiens 3 BAC RP11-211P13 (Roswell Park Can... 40 8.9
68gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome 40 8.9
69gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-bindin... 40 8.9
70gb|AC022634.8| Homo sapiens chromosome , clone RP11-25P11, compl... 40 8.9
71dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
72dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
73dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
74dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
75gb|AC097479.3| Homo sapiens BAC clone RP11-115G5 from 4, complet... 40 8.9
76gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, co... 40 8.9
77dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
78dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete ge... 40 8.9
79dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
80dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.9
81emb|BX004812.8| Zebrafish DNA sequence from clone CH211-201M7 in... 40 8.9
82dbj|AB011475.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 8.9
83gb|AC154819.2| Mus musculus BAC clone RP24-535A1 from 17, comple... 40 8.9
84emb|AJ969509.1| Trebouxia arboricola 18S rRNA gene (partial), IT... 40 8.9
85emb|AJ506745.1|OSA506745 Oryza sativa (japonica cultivar-group) ... 40 8.9
86gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.9
87emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041... 40 8.9
88emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119... 40 8.9
89emb|AL805936.8| Mouse DNA sequence from clone RP23-120K6 on chro... 40 8.9 
>gb|AF277253.1|AF277253 Australopyrum velutinum isolate H6724 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1062

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                    
Query: 450 tagtgatctaaacgctcttatatttctttatggagggagta 490
           ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 843 tagtgatctaaacgctcttatatttctttacagagggagta 883



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                 
Query: 453 tgatctaaacgctcttatatttctttatggagggagta 490
           |||||||||||||||||||||||||||  |||||||||
Sbjct: 842 tgatctaaacgctcttatatttctttacagagggagta 805
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>gb|AF277252.1|AF277252 Australopyrum pectinatum isolate H6771 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1048

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 454 gatctaaacgctcttatatttctttatggagggagta 490
           ||||||||||||||||||||||||||| |||||||||
Sbjct: 840 gatctaaacgctcttatatttctttatagagggagta 804
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>gb|AF277251.1|AF277251 Australopyrum retrofractum isolate H6723 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1061

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 36/37 (97%)
 Strand = Plus / Minus

                                                
Query: 454 gatctaaacgctcttatatttctttatggagggagta 490
           ||||||||||||||||||||||||||| |||||||||
Sbjct: 840 gatctaaacgctcttatatttctttatagagggagta 804
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>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Plus

                                                      
Query: 450   tagtgatctaaacgctcttatatttctttatggagggagta 490
             ||||||||||||||||||||||||||||||  |||||||||
Sbjct: 21697 tagtgatctaaacgctcttatatttctttacagagggagta 21737



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 40/43 (93%)
 Strand = Plus / Minus

                                                        
Query: 449   ttagtgatctaaacgctcttatatttctttatggagggagtaa 491
             |||||||||||||||||||||||||| ||||  ||||||||||
Sbjct: 21694 ttagtgatctaaacgctcttatatttatttacagagggagtaa 21652
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>gb|AY747601.1| Triticum aestivum cultivar Triple Dirk D line VRN-A1 (VRN-A1) gene,
            complete cds; and Stowaway MITE and gypsy retrotransposon
            Sukkula, complete sequence
          Length = 12464

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            |||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 4987 tagtgacctaaacgctcttatatttctttacggagggagta 4947



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 451  agtgatctaaacgctcttatatttcttta 479
            |||||||| ||||||||||||||| ||||
Sbjct: 4992 agtgatctgaacgctcttatatttgttta 5020
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>gb|AY747600.1| Triticum aestivum cultivar Triple Dirk C line VRN-A1 (VRN-A1) gene,
            complete cds; and Stowaway MITE and gypsy retrotransposon
            Sukkula, complete sequence
          Length = 12233

 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 39/41 (95%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            |||||| ||||||||||||||||||||||| ||||||||||
Sbjct: 4756 tagtgacctaaacgctcttatatttctttacggagggagta 4716



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 451  agtgatctaaacgctcttatatttcttta 479
            |||||||| ||||||||||||||| ||||
Sbjct: 4761 agtgatctgaacgctcttatatttgttta 4789
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>dbj|AB182943.1| Triticum aestivum Wknox1a gene for KN1 homeobox protein, complete cds
          Length = 9755

 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 38/40 (95%)
 Strand = Plus / Minus

                                                    
Query: 451  agtgatctaaacgctcttatatttctttatggagggagta 490
            |||||||||||| |||||||||||||||| ||||||||||
Sbjct: 8008 agtgatctaaacactcttatatttctttacggagggagta 7969
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>emb|CR626933.1| Triticum turgidum
          Length = 25216

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 452   gtgatctaaacgctcttatatttctttatggagggagta 490
             ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 11710 gtgatctaaacgctcatatatttctttacggagggagta 11672



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 450   tagtgatctaaacgctcttatatttctttatggagggagta 490
             ||||||||||||  ||||||||||||||||| |||||||||
Sbjct: 11716 tagtgatctaaatactcttatatttctttatagagggagta 11756
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>emb|CR626929.1| Triticum aestivum
          Length = 20745

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Minus

                                                    
Query: 452   gtgatctaaacgctcttatatttctttatggagggagta 490
             ||||||||||||||| |||||||||||| ||||||||||
Sbjct: 14428 gtgatctaaacgctcatatatttctttacggagggagta 14390



 Score = 58.0 bits (29), Expect = 4e-05
 Identities = 38/41 (92%)
 Strand = Plus / Plus

                                                      
Query: 450   tagtgatctaaacgctcttatatttctttatggagggagta 490
             ||||||||||||  ||||||||||||||||| |||||||||
Sbjct: 14434 tagtgatctaaatactcttatatttctttatagagggagta 14474
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>gb|AY663392.1| Triticum aestivum cultivar Renan clone BAC 930H14, complete sequence
          Length = 153766

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            |||||||||||||||||||||||||  |||| ||||||||||
Sbjct: 6360 ttagtgatctaaacgctcttatattagtttacggagggagta 6401



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                           
Query: 449  ttagtgatctaaacgctcttatatttcttta 479
            |||||| | ||||||||||||||||||||||
Sbjct: 3515 ttagtgttttaaacgctcttatatttcttta 3545



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||| ||||||||||  ||||  |||||||||
Sbjct: 6357 tagtgatctaaacactcttatattagtttacagagggagta 6317
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>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagtaa 491
            |||||||||||| | |||||||||||||| ||||||||||||
Sbjct: 8879 tagtgatctaaatgatcttatatttctttgtggagggagtaa 8920



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Minus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||||| |||||||||||||||  |||||||||
Sbjct: 8870 ttagtgatctaaacgatcttatatttctttacagagggagta 8829



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                    
Query: 449 ttagtgatctaaacgctcttatatt 473
           |||||||||||||||||||||||||
Sbjct: 785 ttagtgatctaaacgctcttatatt 761
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>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene
          Length = 1862

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 39/42 (92%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||| ||||||||||||||||||| ||| ||||||||||||
Sbjct: 1744 ttagttatctaaacgctcttatattacttcatggagggagta 1785
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>gb|DQ146421.1| Triticum monococcum strain PI503874 VRN1 (VRN1) gene, complete cds
          Length = 16224

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 450  tagtgatctaaacgctcttatatttctttatggaggga 487
            |||||| ||||||||||||||||||||||| |||||||
Sbjct: 7082 tagtgacctaaacgctcttatatttctttacggaggga 7045
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>gb|DQ146422.1| Triticum monococcum strain PI326317 VRN1 (VRN1) gene, complete cds
          Length = 15688

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 450  tagtgatctaaacgctcttatatttctttatggaggga 487
            |||||| ||||||||||||||||||||||| |||||||
Sbjct: 6543 tagtgacctaaacgctcttatatttctttacggaggga 6506
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>gb|DQ146423.1| Triticum monococcum strain PI306540 VRN1 (VRN1) gene, complete cds
          Length = 16209

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                  
Query: 450  tagtgatctaaacgctcttatatttctttatggaggga 487
            |||||| ||||||||||||||||||||||| |||||||
Sbjct: 7065 tagtgacctaaacgctcttatatttctttacggaggga 7028
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>gb|AY188331.1| Triticum monococcum DV92 chromosome 5AL BAC 231A16, complete sequence
          Length = 133625

 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 36/38 (94%)
 Strand = Plus / Minus

                                                   
Query: 450   tagtgatctaaacgctcttatatttctttatggaggga 487
             |||||| ||||||||||||||||||||||| |||||||
Sbjct: 73615 tagtgacctaaacgctcttatatttctttacggaggga 73578
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>gb|AF277249.1|AF277249 Taeniatherum caput-medusae isolate H10254 disrupted meiotic cDNA 1
           protein (DMC1) gene, partial cds
          Length = 1080

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 31/32 (96%)
 Strand = Plus / Plus

                                           
Query: 448 attagtgatctaaacgctcttatatttcttta 479
           ||||||||| ||||||||||||||||||||||
Sbjct: 844 attagtgatataaacgctcttatatttcttta 875



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 453 tgatctaaacgctcttatatttctttatggagggagta 490
           |||||||||||||||||||||||| ||  |||||||||
Sbjct: 844 tgatctaaacgctcttatatttctctacagagggagta 807
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>emb|X83518.1|HVKNOX3 H.vulgare Knox3 gene
          Length = 10815

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 48/55 (87%)
 Strand = Plus / Plus

                                                                   
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagtaattgacaacagta 503
            |||||||||||||||||||||||||  ||||  ||||||||| ||| || |||||
Sbjct: 7578 ttagtgatctaaacgctcttatattagtttacagagggagtatttgtcagcagta 7632



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                    
Query: 450  tagtgatctaaacgctcttatatt 473
            ||||||||||||||||||||||||
Sbjct: 7575 tagtgatctaaacgctcttatatt 7552
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>emb|X65606.1|HVBKIN12G H.vulgare BKIN12 gene for protein kinase
          Length = 5574

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||||  |||||||||||| || ||||||||||
Sbjct: 2302 ttagtgatctaaacattcttatatttctgtacggagggagta 2343



 Score = 48.1 bits (24), Expect = 0.037
 Identities = 39/44 (88%)
 Strand = Plus / Minus

                                                        
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagtaatt 493
            |||| ||||||| | |||||||||||||||  ||||||||||||
Sbjct: 2299 tagttatctaaatgatcttatatttctttacagagggagtaatt 2256
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>emb|AJ507214.1|HVU507214 Hordeum vulgare bbr gene for barley B recombinant
          Length = 4946

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 29/30 (96%)
 Strand = Plus / Minus

                                          
Query: 450  tagtgatctaaacgctcttatatttcttta 479
            ||||||||||||||||||||||||| ||||
Sbjct: 4329 tagtgatctaaacgctcttatatttgttta 4300



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 449  ttagtgatctaaacgctcttatatttcttt 478
            ||||||||||| || |||||||||||||||
Sbjct: 4332 ttagtgatctagacactcttatatttcttt 4361
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>emb|AJ400713.1|TAE400713 Triticum aestivum vp1B gene for VIVIPAROUS1, exons 1-6
          Length = 4034

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 38/42 (90%)
 Strand = Plus / Minus

                                                      
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagtaa 491
            |||| |||||||||||||||||||  |||| |||||||||||
Sbjct: 2751 tagtaatctaaacgctcttatattagtttacggagggagtaa 2710



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                         
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagtaatt 493
            ||||||||||||| |||||||||||  ||||  ||||||||||||
Sbjct: 2754 ttagtgatctaaatgctcttatattagtttacagagggagtaatt 2798
to top
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase
           (RUBISCO) gene, exons 1 and 2
          Length = 2205

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                 
Query: 450 tagtgatctaaacgctcttatatttctttatggaggga 487
           ||||||||||||| ||||||||||| |||| |||||||
Sbjct: 108 tagtgatctaaacactcttatatttatttacggaggga 71
to top
>gb|AY133248.1| Aegilops tauschii starch synthase II gene, complete cds
          Length = 9024

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            |||| |||||||||||||||||||  |||| ||||||||||
Sbjct: 2851 tagtaatctaaacgctcttatattaatttacggagggagta 2811



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 449  ttagtgatctaaacgctcttata 471
            |||||||||||||||||||||||
Sbjct: 2854 ttagtgatctaaacgctcttata 2876
to top
>gb|AY553259.1| Hordeum murinum isolate Hor_mur phosphoenolpyruvate carboxylase
           (pepC) gene, exons 1, 2 and partial cds
          Length = 1117

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 450 tagtgatctaaacgctcttatatttctttatggagggagta 490
           |||||||||||| |||||||||||  |||| ||||||||||
Sbjct: 574 tagtgatctaaatgctcttatattagtttacggagggagta 614
to top
>emb|AJ302096.1|ASP302096 Aegilops speltoides Pina gene for puroindoline a, cultivar PI 393494
          Length = 2570

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||||||||||||||  ||||  |||||||||
Sbjct: 1429 tagtgatctaaacgctcttatattagtttacagagggagta 1389



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                               
Query: 456  tctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||||||||  |||| ||||||||||
Sbjct: 1439 tctaaacgctcttatattagtttacggagggagta 1473
to top
>dbj|AB201447.1| Triticum aestivum wSSII-D gene for starch synthase II-D, complete cds
          Length = 7010

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            |||| |||||||||||||||||||  |||| ||||||||||
Sbjct: 1607 tagtaatctaaacgctcttatattaatttacggagggagta 1567



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                   
Query: 449  ttagtgatctaaacgctcttata 471
            |||||||||||||||||||||||
Sbjct: 1610 ttagtgatctaaacgctcttata 1632
to top
>dbj|AB178167.1| Triticum aestivum Wcbf2-2 mRNA for AP2/EREBP type transcription
           factor, complete cds
          Length = 941

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 450 tagtgatctaaacgctcttatatttctttatggagggagta 490
           ||||||||||||| ||||||||||  |||| ||||||||||
Sbjct: 782 tagtgatctaaacactcttatattagtttacggagggagta 822
to top
>gb|AF029897.1|AF029897 Triticum aestivum acetyl-coenzyme A carboxylase (Acc-1,1) gene,
            nuclear gene encoding plastid protein, partial cds
          Length = 9285

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 450  tagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||| ||||||||||||||||||  |||| ||||||||||
Sbjct: 6422 tagtgttctaaacgctcttatattagtttacggagggagta 6382



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            |||||||||||||| ||||||||||  ||||  |||||||||
Sbjct: 6425 ttagtgatctaaacactcttatattggtttacagagggagta 6466
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 478     tatggagggagtaattgacaacag 501
               ||||||||||||||||||||||||
Sbjct: 4449830 tatggagggagtaattgacaacag 4449853
to top
>emb|CR626934.1| Triticum aestivum
          Length = 94398

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 450   tagtgatctaaacgctcttatatt 473
             ||||||||||||||||||||||||
Sbjct: 47986 tagtgatctaaacgctcttatatt 47963



 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 450   tagtgatctaaacgctcttatattt 474
             |||||||||||||||||| ||||||
Sbjct: 47993 tagtgatctaaacgctctcatattt 48017
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                       
Query: 478     tatggagggagtaattgacaacag 501
               ||||||||||||||||||||||||
Sbjct: 4449945 tatggagggagtaattgacaacag 4449968
to top
>gb|AC125471.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0042J17, complete sequence
          Length = 171442

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 478   tatggagggagtaattgacaacag 501
             ||||||||||||||||||||||||
Sbjct: 55122 tatggagggagtaattgacaacag 55145
to top
>gb|AF201084.1|AF201084 Secale cereale secalin precursor (gsec2-1) gene, complete cds
          Length = 4971

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                            
Query: 460  aacgctcttatatttctttatggagggagtaa 491
            ||||||||||||||||| |||| |||||||||
Sbjct: 2983 aacgctcttatatttctatatgaagggagtaa 2952
to top
>gb|AY534123.1|SEG_AY534122S2 Aegilops tauschii transposons Caspar, XJ, Angela, and XJ, complete
              sequence; LRR protein WM1.7 (WM1.7) and LRR protein WM1.12
              (WM1.12) genes, complete cds; transposons Ophelia2,
              Angela3s, and XJ3, complete sequence; LRR protein WM1.3
              (WM1.3) gene, complete cds; Stowaway MITE, transposons XJ1,
              Jody, Angela, and XJ and Stowaway MITE, complete sequence;
              LRR protein WM1.2 (WM1.2) and LLR protein WM1.1 (WM1.1)
              genes, complete cds; transposons XJ, XA, Angela, and Fred
              and WM1.11 gene, complete sequence; RPM1-like sequence and
              LRR protein WM1.10 (WM1.10) genes, complete cds; and
              transposon XJ, complete sequence
          Length = 198649

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 35/39 (89%)
 Strand = Plus / Minus

                                                     
Query: 454    gatctaaacgctcttatatttctttatggagggagtaat 492
              |||||||| |||||||||||||||||  |||| ||||||
Sbjct: 117342 gatctaaatgctcttatatttctttacagaggaagtaat 117304
to top
>gb|AY663391.1| Triticum turgidum cultivar Langdon clone BAC 1156G16, complete
           sequence
          Length = 187012

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 449 ttagtgatctaaacgctcttatatttcttta 479
           |||||| | ||||||||||||||||||||||
Sbjct: 628 ttagtgttttaaacgctcttatatttcttta 658
to top
>gb|DQ295068.1| Secale cereale PKABA1 gene, partial sequence
          Length = 1082

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                              
Query: 456 tctaaacgctcttatatttctttatggagggagta 490
           ||||||||||||||||||  |||| ||||||||||
Sbjct: 969 tctaaacgctcttatattagtttaaggagggagta 935



 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||||||||||| |||||||||||  ||||  |||||||||
Sbjct: 985  ttagtgatctaaaagctcttatattagtttacagagggagta 1026
to top
>gb|AY485644.1| Triticum monococcum phosphatidylserine decarboxylase, ZCCT2, ZCCT1, and
              SNF2P genes, complete cds; nucellin pseudogene, complete
              sequence; putative transposase, phosphatidylinositol
              phosphatidylcholine transfer protein sec14 cytosolic-like
              protein, and phytochrome P450-like protein genes, complete
              cds; and unknown genes
          Length = 438828

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 452    gtgatctaaacgctcttatatttctttatggagggagt 489
              ||||||||||| ||||||||||  |||| |||||||||
Sbjct: 177698 gtgatctaaactctcttatattagtttacggagggagt 177661
to top
>gb|AF427791.1| Hordeum vulgare Mla locus, complete sequence
          Length = 261265

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 450   tagtgatctaaacgctcttata 471
             ||||||||||||||||||||||
Sbjct: 11911 tagtgatctaaacgctcttata 11932
to top
>emb|AM000057.1| Hordeum vulgare HKT1 gene for high-affinity sodium transporter, exons
            1-3
          Length = 2155

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                      
Query: 449  ttagtgatctaaacgctcttatatttctttatggagggagta 490
            ||||| |||||||||||||||||||  ||||  |||||||||
Sbjct: 1297 ttagtaatctaaacgctcttatattagtttacagagggagta 1338
to top
>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                       
Query: 450    tagtgatctaaacgctcttatatttctttatggagggagta 490
              ||||| |||||| |||||||||||  |||| ||||||||||
Sbjct: 150232 tagtgttctaaatgctcttatattagtttacggagggagta 150192
to top
>gb|DQ481665.1| Takifugu rubripes HoxBa gene cluster, complete sequence
          Length = 294716

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 341    aacaacaaaaactttatagca 361
              |||||||||||||||||||||
Sbjct: 234280 aacaacaaaaactttatagca 234300
to top
>emb|CR626926.1| Aegilops tauschii
          Length = 94421

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 450   tagtgatctaaacgctcttatattt 474
             |||||||||||||||||| ||||||
Sbjct: 85588 tagtgatctaaacgctctcatattt 85612



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 450   tagtgatctaaacgctcttatatt 473
             |||||||||||||||| |||||||
Sbjct: 85581 tagtgatctaaacgcttttatatt 85558
to top
>emb|AL935256.1| Lactobacillus plantarum strain WCFS1 complete genome; segment 5/11
          Length = 302050

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 375   aaacaggtccagttgcaagcaagtctacaaagc 407
             |||||||| ||||| || |||||||||||||||
Sbjct: 66213 aaacaggttcagtttcaggcaagtctacaaagc 66245
to top
>emb|AL731639.3|OSJN00288 Oryza sativa genomic DNA, chromosome 4, BAC clone: OJ000315_02,
            complete sequence
          Length = 112404

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                 
Query: 464  ctcttatatttctttatggagggagtaattgacaaca 500
            ||||||||||| || ||||||||||||  ||||||||
Sbjct: 6856 ctcttatattttttgatggagggagtatgtgacaaca 6892
to top
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14,
             complete sequence
          Length = 158312

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 464   ctcttatatttctttatggagggagtaattgacaaca 500
             ||||||||||| || ||||||||||||  ||||||||
Sbjct: 99615 ctcttatattttttgatggagggagtatgtgacaaca 99651
to top
>gb|AC124046.2| Homo sapiens chromosome 3 clone RP11-352B8, complete sequence
          Length = 166496

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 608   attcatgaaggcaaaaaattc 628
             |||||||||||||||||||||
Sbjct: 23120 attcatgaaggcaaaaaattc 23100
to top
>gb|AY951945.1| Triticum monococcum TmBAC 60J11 FR-Am2 locus, genomic sequence
          Length = 103866

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Plus

                                                      
Query: 450   tagtgatctaaacgctcttatatttctttatggagggagta 490
             |||||||||||| | |||||||||| |||| | ||||||||
Sbjct: 84465 tagtgatctaaatggtcttatatttgtttacgaagggagta 84505
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                     
Query: 464      ctcttatatttctttatggagggagtaattgacaaca 500
                ||||||||||| || ||||||||||||  ||||||||
Sbjct: 20036952 ctcttatattttttgatggagggagtatgtgacaaca 20036988



 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 284      aactcttgcgagaacataag 303
                ||||||||||||||||||||
Sbjct: 30765935 aactcttgcgagaacataag 30765954
to top
>gb|AC008732.9| Homo sapiens chromosome 16 clone CTD-2519M14, complete sequence
          Length = 185158

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 341   aacaacaaaaactttatagca 361
             |||||||||||||||||||||
Sbjct: 94833 aacaacaaaaactttatagca 94853
to top
>gb|AF474071.1| Hordeum vulgare subsp. vulgare cultivar Morex BAC clone 745c13,
             complete sequence
          Length = 102842

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 33/37 (89%)
 Strand = Plus / Plus

                                                  
Query: 456   tctaaacgctcttatatttctttatggagggagtaat 492
             |||||| |||||||||||  |||| ||||||||||||
Sbjct: 34560 tctaaatgctcttatattagtttacggagggagtaat 34596
to top
>gb|AF446141.1| Aegilops tauschii LZ-NBS-LRR class RGA, NBS-LRR class RGA, HCBT-like
             putative defense response protein, and putative alliin
             lyase genes, complete cds; and unknown genes
          Length = 106618

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 455   atctaaacgctcttatatttcttta 479
             ||||||| |||||||||||||||||
Sbjct: 53500 atctaaatgctcttatatttcttta 53524
to top
>gb|AC154378.2| Mus musculus BAC clone RP23-64O5 from 17, complete sequence
          Length = 232701

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 295    gaacataagcatttttagccttttc 319
              ||||||||||||||| |||||||||
Sbjct: 110403 gaacataagcattttgagccttttc 110379
to top
>gb|AC090710.16| Homo sapiens 12 BAC RP11-754J4 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 174302

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 100    ttttcagtgaaaattttgttt 120
              |||||||||||||||||||||
Sbjct: 104177 ttttcagtgaaaattttgttt 104157
to top
>gb|AC007870.3|AC007870 Genomic sequence for Homo sapiens clone 4P6, complete sequence
          Length = 134757

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 608    attcatgaaggcaaaaaattc 628
              |||||||||||||||||||||
Sbjct: 129040 attcatgaaggcaaaaaattc 129020
to top
>emb|AJ852539.1| Triticum aestivum ltp9.3d gene for type 1 non specific lipid
           transfer protein precursor, exons 1-2
          Length = 680

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                    
Query: 450 tagtgatctaaacgctcttatatttctttatggagggagta 490
           ||||| ||||||||||| || ||||| ||||| ||||||||
Sbjct: 449 tagtggtctaaacgctcatacatttcgttatgcagggagta 409
to top
>gb|DQ288986.1| Cucumis melo putative alcohol dehydrogenases (ADH1) mRNA, complete
           cds
          Length = 1502

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 327 aagcaaccaacatgaacaaca 347
           |||||||||||||||||||||
Sbjct: 629 aagcaaccaacatgaacaaca 609
to top
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07,
             complete sequence
          Length = 146712

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   atggagggagtaattgacaa 498
             ||||||||||||||||||||
Sbjct: 19054 atggagggagtaattgacaa 19073
to top
>gb|AF488415.1| Triticum monococcum chromosome 7Am BAC 5K14 complete sequence
          Length = 168746

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 456    tctaaacgctcttatatttctttatggaggga 487
              ||||||||||||||||||  |||| |||||||
Sbjct: 103700 tctaaacgctcttatattagtttacggaggga 103669
to top
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11,
             complete sequence
          Length = 162772

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 479   atggagggagtaattgacaa 498
             ||||||||||||||||||||
Sbjct: 98868 atggagggagtaattgacaa 98887
to top
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 450  tagtgatctaaacgctcttatatt 473
            |||| |||||||||||||||||||
Sbjct: 1965 tagtaatctaaacgctcttatatt 1988
to top
>gb|AC024876.1| Caenorhabditis elegans cosmid Y94H6A, complete sequence
          Length = 78089

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 98    ctttttcagtgaaaattttg 117
             ||||||||||||||||||||
Sbjct: 20135 ctttttcagtgaaaattttg 20116
to top
>gb|AC121830.3| Mus musculus BAC clone RP24-63N24 from chromosome 7, complete sequence
          Length = 211478

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 325    caaagcaaccaacatgaacaacaaaaac 352
              |||| |||||||||| ||||||||||||
Sbjct: 102903 caaaacaaccaacatcaacaacaaaaac 102930
to top
>emb|Z93396.1|CEZC15 Caenorhabditis elegans Cosmid ZC15, complete sequence
          Length = 35875

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 107   tgaaaattttgtttctgcca 126
             ||||||||||||||||||||
Sbjct: 22390 tgaaaattttgtttctgcca 22409
to top
>emb|AL022164.1|HS581F7 Human DNA sequence from clone RP4-581F7 on chromosome Xq26.1-27.3,
              complete sequence
          Length = 156432

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    acacacccacaaaatttaaa 209
              ||||||||||||||||||||
Sbjct: 146828 acacacccacaaaatttaaa 146847
to top
>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
             complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 284   aactcttgcgagaacataag 303
             ||||||||||||||||||||
Sbjct: 33357 aactcttgcgagaacataag 33376
to top
>gb|AC158132.6| Mus musculus chromosome 1, clone RP23-11K8, complete sequence
          Length = 231218

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 190    acacacccacaaaatttaaa 209
              ||||||||||||||||||||
Sbjct: 173804 acacacccacaaaatttaaa 173823
to top
>gb|AC008249.14| Homo sapiens 3 BAC RP11-211P13 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 184203

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 111   aattttgtttctgccactct 130
             ||||||||||||||||||||
Sbjct: 41023 aattttgtttctgccactct 41004
to top
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome
          Length = 3046682

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 314     cttttccagagcaaagcaac 333
               ||||||||||||||||||||
Sbjct: 2969638 cttttccagagcaaagcaac 2969657
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>gb|AF376136.1|AF376136 Triticum aestivum putative CRT/DRE-binding factor (CBF1) mRNA,
           complete cds
          Length = 800

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 450 tagtgatctaaacgctcttatatt 473
           ||||||||||||| ||||||||||
Sbjct: 739 tagtgatctaaacactcttatatt 762
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>gb|AC022634.8| Homo sapiens chromosome , clone RP11-25P11, complete sequence
          Length = 161602

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 189    cacacacccacaaaatttaa 208
              ||||||||||||||||||||
Sbjct: 108545 cacacacccacaaaatttaa 108564
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
               sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     gatgctttgtaaactactcc 440
               ||||||||||||||||||||
Sbjct: 3669478 gatgctttgtaaactactcc 3669459
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 479      atggagggagtaattgacaa 498
                ||||||||||||||||||||
Sbjct: 25156213 atggagggagtaattgacaa 25156232
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tgaaaattttgtttctgcca 126
              ||||||||||||||||||||
Sbjct: 526475 tgaaaattttgtttctgcca 526456
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 107      tgaaaattttgtttctgcca 126
                ||||||||||||||||||||
Sbjct: 37286244 tgaaaattttgtttctgcca 37286225
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>gb|AC097479.3| Homo sapiens BAC clone RP11-115G5 from 4, complete sequence
          Length = 137848

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 103    tcagtgaaaattttgtttct 122
              ||||||||||||||||||||
Sbjct: 100044 tcagtgaaaattttgtttct 100063
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>gb|AC102491.19| Mus musculus chromosome 1, clone RP24-529L13, complete sequence
          Length = 190728

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 190    acacacccacaaaatttaaa 209
              ||||||||||||||||||||
Sbjct: 151097 acacacccacaaaatttaaa 151078
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>dbj|AP003287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0679C12
          Length = 153666

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tgaaaattttgtttctgcca 126
              ||||||||||||||||||||
Sbjct: 123233 tgaaaattttgtttctgcca 123214
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>dbj|BA000028.3| Oceanobacillus iheyensis HTE831 DNA, complete genome
          Length = 3630528

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 96      ttctttttcagtgaaaattt 115
               ||||||||||||||||||||
Sbjct: 2518571 ttctttttcagtgaaaattt 2518552
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>dbj|AP004752.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0501G04
          Length = 156603

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  tgaaaattttgtttctgcca 126
            ||||||||||||||||||||
Sbjct: 4528 tgaaaattttgtttctgcca 4509
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>dbj|AP004769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0017C12
          Length = 135356

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    tgaaaattttgtttctgcca 126
              ||||||||||||||||||||
Sbjct: 122716 tgaaaattttgtttctgcca 122697
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>emb|BX004812.8| Zebrafish DNA sequence from clone CH211-201M7 in linkage group 25,
             complete sequence
          Length = 189554

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 99    tttttcagtgaaaattttgt 118
             ||||||||||||||||||||
Sbjct: 69311 tttttcagtgaaaattttgt 69330
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>dbj|AB011475.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K9L2
          Length = 60583

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 101   tttcagtgaaaattttgttt 120
             ||||||||||||||||||||
Sbjct: 47903 tttcagtgaaaattttgttt 47922
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>gb|AC154819.2| Mus musculus BAC clone RP24-535A1 from 17, complete sequence
          Length = 165136

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 508    gagatgggatatgaatattt 527
              ||||||||||||||||||||
Sbjct: 123909 gagatgggatatgaatattt 123928
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>emb|AJ969509.1| Trebouxia arboricola 18S rRNA gene (partial), ITS1, 5.8S rRNA gene,
            ITS2 and 26S rRNA gene (partial), isolate P-3-I
          Length = 3213

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 586  accttcacaggcatggagag 605
            ||||||||||||||||||||
Sbjct: 1162 accttcacaggcatggagag 1143
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>emb|AJ506745.1|OSA506745 Oryza sativa (japonica cultivar-group) hkt5 pseudogene, exons 1-3
          Length = 3203

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 284  aactcttgcgagaacataag 303
            ||||||||||||||||||||
Sbjct: 1975 aactcttgcgagaacataag 1956
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 421     gatgctttgtaaactactcc 440
               ||||||||||||||||||||
Sbjct: 3669452 gatgctttgtaaactactcc 3669433
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>emb|AL713933.6|CNS07YPE Oryza sativa chromosome 12, . BAC OJ1041_D02 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 104421

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   gatgctttgtaaactactcc 440
             ||||||||||||||||||||
Sbjct: 80195 gatgctttgtaaactactcc 80214
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>emb|AL731761.3|CNS07YPV Oryza sativa chromosome 12, . BAC OJ1119_B11 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 122128

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 421   gatgctttgtaaactactcc 440
             ||||||||||||||||||||
Sbjct: 19921 gatgctttgtaaactactcc 19940
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>emb|AL805936.8| Mouse DNA sequence from clone RP23-120K6 on chromosome X, complete
              sequence
          Length = 151030

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 601    gagagctattcatgaaggca 620
              ||||||||||||||||||||
Sbjct: 105415 gagagctattcatgaaggca 105434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,750,465
Number of Sequences: 3902068
Number of extensions: 6750465
Number of successful extensions: 132474
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 131726
Number of HSP's gapped (non-prelim): 748
length of query: 652
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 629
effective length of database: 17,143,297,704
effective search space: 10783134255816
effective search space used: 10783134255816
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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