Clone Name | rbasd13c03 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protei... | 78 | 8e-15 | 2 | VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protei... | 78 | 8e-15 | 3 | GUAA_HELHP (Q7VG78) Probable GMP synthase [glutamine-hydrolyzing... | 28 | 5.3 | 4 | GUAA_CHLTE (Q8KFZ5) GMP synthase [glutamine-hydrolyzing] (EC 6.3... | 28 | 9.1 |
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>VPS29_MOUSE (Q9QZ88) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| Length = 182 Score = 77.8 bits (190), Expect = 8e-15 Identities = 31/47 (65%), Positives = 40/47 (85%) Frame = -3 Query: 143 LHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAML 3 +HI RG++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+L Sbjct: 56 VHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALL 102
>VPS29_HUMAN (Q9UBQ0) Vacuolar protein sorting 29 (Vesicle protein sorting 29)| (hVPS29) (PEP11) Length = 182 Score = 77.8 bits (190), Expect = 8e-15 Identities = 31/47 (65%), Positives = 40/47 (85%) Frame = -3 Query: 143 LHITRGEYDEDARYPETKTVTIGQFKLGLCHGHQVVPWGDLDSLAML 3 +HI RG++DE+ YPE K VT+GQFK+GL HGHQV+PWGD+ SLA+L Sbjct: 56 VHIVRGDFDENLNYPEQKVVTVGQFKIGLIHGHQVIPWGDMASLALL 102
>GUAA_HELHP (Q7VG78) Probable GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 1375 Score = 28.5 bits (62), Expect = 5.3 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -3 Query: 122 YDEDARYPETKTVTIGQFKLGLCHGHQVV 36 Y++DA P++ T+G LG+C+G Q++ Sbjct: 62 YEKDAYKPDSAIFTLGIPILGICYGMQLI 90
>GUAA_CHLTE (Q8KFZ5) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 516 Score = 27.7 bits (60), Expect = 9.1 Identities = 11/29 (37%), Positives = 18/29 (62%) Frame = -3 Query: 122 YDEDARYPETKTVTIGQFKLGLCHGHQVV 36 YDE A P+ + ++G LG+C+G Q + Sbjct: 62 YDEKAFMPDPEVFSLGVPVLGICYGLQAI 90 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 21,886,452 Number of Sequences: 219361 Number of extensions: 305912 Number of successful extensions: 876 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 867 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 876 length of database: 80,573,946 effective HSP length: 23 effective length of database: 75,528,643 effective search space used: 1812687432 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)