ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13b20 |
|---|---|
| Clone Library Name | barley_pub |
>S5A1_HUMAN (P18405) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) (S5AR) Length = 259 Score = 61.6 bits (148), Expect = 8e-10 Identities = 37/94 (39%), Positives = 50/94 (53%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LRNLR P G GY+IPRG LF VT ANY EI +W G+ +A+ +V G F ++ Sbjct: 172 LRNLRKP-GDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLS 230 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H + F+ +YP+ I+ PFL Sbjct: 231 GRAKEHHEWYLRKFE------EYPKFRKIIIPFL 258
>S5A1_MACFA (Q28891) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) Length = 263 Score = 61.6 bits (148), Expect = 8e-10 Identities = 38/94 (40%), Positives = 50/94 (53%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LRNLR P G GY+IPRG LF VT ANY EI +W G+ +A+ +V G F ++ Sbjct: 176 LRNLRKP-GDTGYKIPRGGLFEYVTAANYFGEIMEWCGYALASWSVQGAAFAFFTFCFLS 234 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H + F+ +YP+ IL PFL Sbjct: 235 GRAKEHHRWYLQKFE------EYPKFRKILIPFL 262
>S5A1_RAT (P24008) 3-oxo-5-alpha-steroid 4-dehydrogenase 1 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 1) (SR type 1) Length = 259 Score = 61.2 bits (147), Expect = 1e-09 Identities = 36/94 (38%), Positives = 50/94 (53%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LRNLR P G GY+IPRG LF V+ ANY E+ +W GF +A+ ++ G VF + + Sbjct: 172 LRNLRKP-GETGYKIPRGGLFEYVSAANYFGELVEWCGFALASWSLQGVVFALFTLSTLL 230 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H + F+ YP+ IL PF+ Sbjct: 231 TRAKQHHQWYHEKFE------DYPKSRKILIPFV 258
>GPSN2_RAT (Q64232) Synaptic glycoprotein SC2| Length = 308 Score = 56.2 bits (134), Expect = 3e-08 Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRG------FLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAV 278 LR+LR P GS +IP +LF +V+C NYT E+ W+GF I TQ V +F V Sbjct: 215 LRDLR-PAGSKTRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAIMTQCVPVALFSLV 273 Query: 277 AAAIMTNWALGKHSRLRKLFDGKDGRPKYPRRWVILP 167 MT WA GKH K F R P R I+P Sbjct: 274 GFTQMTIWAKGKHRSYLKEF-----RDYPPLRMPIIP 305
>GPSN2_MOUSE (Q9CY27) Synaptic glycoprotein SC2| Length = 308 Score = 56.2 bits (134), Expect = 3e-08 Identities = 40/97 (41%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRG------FLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAV 278 LR+LR P GS +IP +LF +V+C NYT E+ W+GF I TQ V +F V Sbjct: 215 LRDLR-PAGSKTRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAILTQCVPVALFSLV 273 Query: 277 AAAIMTNWALGKHSRLRKLFDGKDGRPKYPRRWVILP 167 MT WA GKH K F R P R I+P Sbjct: 274 GFTQMTIWAKGKHRSYLKEF-----RDYPPLRMPIIP 305
>GPSN2_HUMAN (Q9NZ01) Synaptic glycoprotein SC2| Length = 308 Score = 55.1 bits (131), Expect = 8e-08 Identities = 39/97 (40%), Positives = 49/97 (50%), Gaps = 6/97 (6%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRG------FLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAV 278 LR+LR P GS +IP +LF +V+C NYT E+ W+GF I TQ + +F V Sbjct: 215 LRDLR-PAGSKTRKIPYPTKNPFTWLFLLVSCPNYTYEVGSWIGFAIMTQCLPVALFSLV 273 Query: 277 AAAIMTNWALGKHSRLRKLFDGKDGRPKYPRRWVILP 167 MT WA GKH K F R P R I+P Sbjct: 274 GFTQMTIWAKGKHRSYLKEF-----RDYPPLRMPIIP 305
>S5A2_RAT (P31214) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 52.8 bits (125), Expect = 4e-07 Identities = 35/94 (37%), Positives = 48/94 (51%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LR LR P G Y+IPRG LF V+ AN+ EI +W+G+ +AT +V + F + Sbjct: 167 LRQLRKP-GEVIYRIPRGGLFTYVSGANFLGEIIEWIGYALATWSVPAFAFAFFTLCFLG 225 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H K+F KD YP+ L PF+ Sbjct: 226 MQAFYHHRFYLKMF--KD----YPKSRKALIPFI 253
>S5A2_MOUSE (Q99N99) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 51.2 bits (121), Expect = 1e-06 Identities = 34/94 (36%), Positives = 48/94 (51%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LR LR P G Y+IP+G LF V+ AN+ EI +W+G+ +AT +V + F + Sbjct: 167 LRQLRKP-GEVIYRIPQGGLFTYVSGANFLGEIIEWMGYALATWSVPAFAFAFFTLCFLG 225 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H K+F KD YP+ L PF+ Sbjct: 226 MQAFYHHRFYLKMF--KD----YPKSRKALIPFI 253
>S5A2_MACFA (Q28892) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 50.1 bits (118), Expect = 2e-06 Identities = 31/94 (32%), Positives = 47/94 (50%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LR LR P G Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + Sbjct: 167 LRQLRKP-GEITYRIPKGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSVCFLG 225 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H K+F+ YP+ L PF+ Sbjct: 226 LRAFHHHRFYLKMFE------DYPKSRKALIPFI 253
>S5A2_HUMAN (P31213) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) (Type II 5-alpha reductase) Length = 254 Score = 50.1 bits (118), Expect = 2e-06 Identities = 31/94 (32%), Positives = 47/94 (50%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LR LR P G Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + Sbjct: 167 LRQLRKP-GEISYRIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLG 225 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H K+F+ YP+ L PF+ Sbjct: 226 LRAFHHHRFYLKMFE------DYPKSRKALIPFI 253
>S5A2_PIG (O18765) 3-oxo-5-alpha-steroid 4-dehydrogenase 2 (EC 1.3.99.5)| (Steroid 5-alpha-reductase 2) (SR type 2) (5 alpha-SR2) Length = 254 Score = 48.5 bits (114), Expect = 7e-06 Identities = 31/94 (32%), Positives = 47/94 (50%) Frame = -2 Query: 439 LRNLRSPTGSGGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMT 260 LR LR P G Y+IP+G LF V+ AN+ EI +W+G+ +AT ++ F + + Sbjct: 167 LRQLRKP-GEVIYKIPQGGLFTYVSGANFLGEIIEWIGYALATWSLPALAFAFFSLCFLG 225 Query: 259 NWALGKHSRLRKLFDGKDGRPKYPRRWVILPPFL 158 A H K+F+ YP+ L PF+ Sbjct: 226 LRAFHHHRFYVKMFE------DYPKSRKALIPFI 253
>DET2_ARATH (Q38944) Probable steroid reductase DET2 (EC 1.3.99.-)| Length = 262 Score = 46.2 bits (108), Expect = 4e-05 Identities = 27/84 (32%), Positives = 40/84 (47%) Frame = -2 Query: 409 GGYQIPRGFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAIMTNWALGKHSRL 230 GGY IPRG F +V+C NY E +WLG+ + T + AG F + + A H Sbjct: 183 GGYVIPRGGWFELVSCPNYFGEAIEWLGWAVMTWSWAGIGFFLYTCSNLFPRARASHKWY 242 Query: 229 RKLFDGKDGRPKYPRRWVILPPFL 158 F + +YP+ + PF+ Sbjct: 243 IAKF-----KEEYPKTRKAVIPFV 261
>MYPT1_RAT (Q10728) Protein phosphatase 1 regulatory subunit 12A (Myosin| phosphatase-targeting subunit 1) (Myosin phosphatase target subunit 1) (Protein phosphatase myosin-binding subunit) (MBSP) (Serine/threonine protein phosphatase PP1 smooth muscle reg Length = 1032 Score = 31.2 bits (69), Expect = 1.2 Identities = 16/49 (32%), Positives = 26/49 (53%) Frame = -3 Query: 432 TSGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSS 286 T +P A+ T +H AS + A TTP S+N TSP + + +++ Sbjct: 371 TDKTKPMASVTNAHTASTQAAPAAVTTPTLSSNQGTPTSPVKKFPTSTT 419
>PDZK3_RAT (Q9QZR8) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Plakophilin-related armadillo repeat protein-interacting PDZ protein) Length = 2766 Score = 30.8 bits (68), Expect = 1.6 Identities = 18/42 (42%), Positives = 24/42 (57%), Gaps = 6/42 (14%) Frame = -3 Query: 390 GASCSTS*HAQ------TTPPRSTNGSGSTSPPRPWRVTSSL 283 GA S+S HAQ T+ PR T G+GS PP+ W + S+ Sbjct: 1384 GAGSSSSHHAQMVRSDQTSSPRKTGGTGS-PPPQQWALQPSV 1424
>RNFD_BUCBP (Q89AW7) Electron transport complex protein rnfD| Length = 354 Score = 30.4 bits (67), Expect = 2.0 Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%) Frame = -2 Query: 388 GFLFNIVTCANYTTEIYQWLGFNIATQTVAGYVFLAVAAAI-MTNWALGKHSRLRKLFD 215 G F+IV +IY LG NI + GY L V+ I MTNW+ ++S LFD Sbjct: 100 GAFFSIVIAK----QIYGGLGNNIFNPAMTGYSILLVSFPILMTNWSF-QNSSYFNLFD 153
>CBLB_MOUSE (Q3TTA7) E3 ubiquitin-protein ligase CBL-B (EC 6.3.2.-) (Signal| transduction protein CBL-B) (SH3-binding protein CBL-B) (Casitas B-lineage lymphoma proto-oncogene b) Length = 982 Score = 30.4 bits (67), Expect = 2.0 Identities = 22/72 (30%), Positives = 31/72 (43%), Gaps = 5/72 (6%) Frame = -3 Query: 432 TSGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSP-----PRPWRVTSSLPWRRP 268 TSG P A R+ G S + +Q ++ GS +P PRP R + R+P Sbjct: 863 TSGQVPLPPARRAAGDSGKANRASQDYDQLPSSSDGSQAPARPPKPRPRRTAPEIHHRKP 922 Query: 267 S*PTGRLESTAA 232 P LE+ A Sbjct: 923 HGPEAALENVDA 934
>NRG3_MOUSE (O35181) Pro-neuregulin-3, membrane-bound isoform precursor| (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)] Length = 713 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -3 Query: 426 GARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRR 271 GA AAAA+ G + + + A P G G+ PPR R + + W R Sbjct: 12 GAASAAAASAEEGTAAAAAAAAAGGGPDG-GGEGAAEPPRELRCSDCIVWNR 62
>NRG3_HUMAN (P56975) Pro-neuregulin-3, membrane-bound isoform precursor| (Pro-NRG3) [Contains: Neuregulin-3 (NRG-3)] Length = 720 Score = 30.0 bits (66), Expect = 2.7 Identities = 17/52 (32%), Positives = 24/52 (46%) Frame = -3 Query: 426 GARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRR 271 GA AAAA+ G + + + A P G G+ PPR R + + W R Sbjct: 12 GAASAAAASAEEGTAAAAAAAAAGGGPDG-GGEGAAEPPRELRCSDCIVWNR 62
>TRPI_PSEAE (P11720) HTH-type transcriptional regulator trpI (TrpBA operon| transcriptional activator) Length = 295 Score = 29.6 bits (65), Expect = 3.5 Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 12/98 (12%) Frame = +2 Query: 179 PSARVLGPPILPVEQLPQA--AVLSKRPVGHDGRRHGKE--------DVTRHGLGGDVEP 328 P+AR+L P+L PQA A + + + + R+G+ + GLG + P Sbjct: 184 PAARLLQEPLLHTASRPQAWPAWAASQGLAAEALRYGQGFEHLYYLLEAAVAGLGVAIAP 243 Query: 329 EPLV--DLGGVVCACHDVEQEAPWDLVAAAAGRAPEVP 436 EPLV DL A APW + A A VP Sbjct: 244 EPLVRDDLAAGRLA-------APWGFIETDARLALWVP 274
>HIPK2_MESAU (Q9WUM7) Homeodomain-interacting protein kinase 2 (EC 2.7.11.1)| (Mx-interacting protein kinase) (PKM) Length = 1168 Score = 29.3 bits (64), Expect = 4.5 Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 4/74 (5%) Frame = -3 Query: 396 SHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRRP---S*PTGRLESTAA*G 226 SH CS S + + P ST S S P P SLP+ + TG + T+A Sbjct: 46 SHSKLCSQSKNIPPSQPASTTVSTSLPIPNP-----SLPYEQTIIFPGSTGHIVVTSASS 100 Query: 225 SCSTGR-MGGPSTL 187 + TG+ +GGP L Sbjct: 101 TSVTGQVLGGPHNL 114
>CAC1G_HUMAN (O43497) Voltage-dependent T-type calcium channel alpha-1G subunit| (Voltage-gated calcium channel alpha subunit Cav3.1) (Cav3.1c) (NBR13) Length = 2377 Score = 29.3 bits (64), Expect = 4.5 Identities = 18/51 (35%), Positives = 24/51 (47%) Frame = -3 Query: 417 PAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRRPS 265 PA+ T S G++ + H +PP S +SP PW SS RR S Sbjct: 1064 PASRRTSSSGSAEPGAAHEMKSPP-----SARSSPHSPWSAASSWTSRRSS 1109
>CHSA_EMENI (P30584) Chitin synthase A (EC 2.4.1.16) (Chitin-UDP| acetyl-glucosaminyl transferase A) (Class-II chitin synthase A) Length = 1013 Score = 28.9 bits (63), Expect = 5.9 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 8/41 (19%) Frame = -3 Query: 366 HAQTTPPRSTNG--------SGSTSPPRPWRVTSSLPWRRP 268 +A T PP + +G S SP RPW T + W RP Sbjct: 46 NAPTIPPPTASGADEMRYTASRPASPARPWSPTRAADWVRP 86
>K6PF_LACDE (P80019) 6-phosphofructokinase (EC 2.7.1.11) (Phosphofructokinase)| (Phosphohexokinase) Length = 319 Score = 28.9 bits (63), Expect = 5.9 Identities = 18/65 (27%), Positives = 30/65 (46%) Frame = +2 Query: 113 VESLDTSLASTVSSSQEWRKDHPSARVLGPPILPVEQLPQAAVLSKRPVGHDGRRHGKED 292 +ES D + VS + + +P + +EQL + + + +G DG HG Sbjct: 52 LESEDVAHLINVSGTFLYSARYPEFAEEEGQLAGIEQLKKHGIDAVVVIGGDGSYHGALQ 111 Query: 293 VTRHG 307 +TRHG Sbjct: 112 LTRHG 116
>MAGE1_HUMAN (Q9HCI5) Melanoma-associated antigen E1 (MAGE-E1 antigen)| (Hepatocellular carcinoma-associated protein 1) Length = 957 Score = 28.9 bits (63), Expect = 5.9 Identities = 27/83 (32%), Positives = 37/83 (44%), Gaps = 1/83 (1%) Frame = -3 Query: 432 TSGARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRRPS*PTG 253 T G P+ + G STS PP +++GS ++ PP P S+L +P+ P G Sbjct: 347 TPGEGPSTSVLPIPGEGLSTS-----VPPTASDGSDTSVPPTPGEGASTLV--QPTAPDG 399 Query: 252 RLESTAA*GSCSTGRMG-GPSTL 187 GS G GPSTL Sbjct: 400 P-------GSSVLPNPGEGPSTL 415
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 28.5 bits (62), Expect = 7.7 Identities = 34/91 (37%), Positives = 39/91 (42%), Gaps = 7/91 (7%) Frame = -3 Query: 435 GTSGARPA---AAATRSHGASC----STS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPW 277 G + A PA A T S G + ST A T PR + +GST P P TS+LP Sbjct: 1639 GLTRAPPASTTAVPTLSEGLTSPRYTSTLGTATTGGPRQS--AGSTEPTVPGVATSTLPT 1696 Query: 276 RRPS*PTGRLESTAA*GSCSTGRMGGPSTLA 184 R L T GS T R P TLA Sbjct: 1697 R------SALPGTT--GSLGTWRPSQPPTLA 1719
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 28.5 bits (62), Expect = 7.7 Identities = 23/57 (40%), Positives = 29/57 (50%), Gaps = 5/57 (8%) Frame = +2 Query: 176 HPSARVLGPP-ILPVEQLPQAAVLSKRPVGHDGR-RHGKEDVT---RHGLGGDVEPE 331 HP A V GPP LP +Q + + S+RP+G R G V+ R G GG PE Sbjct: 958 HPGAWVPGPPPYLPRQQSDGSLLRSQRPMGTSRRGLRGPAQVSAQLRAGGGGRDAPE 1014
>TSGA2_MOUSE (Q8VIG3) Testis-specific gene A2 protein (Male meiotic metaphase| chromosome-associated acidic protein) (Meichroacidin) Length = 301 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/56 (28%), Positives = 24/56 (42%) Frame = +2 Query: 161 EWRKDHPSARVLGPPILPVEQLPQAAVLSKRPVGHDGRRHGKEDVTRHGLGGDVEP 328 +W+ + + L P L EQ P + P G G ED+ G G++EP Sbjct: 209 KWKALNITELALWTPTLSEEQPPPEGQGQEEPQGLTGVGDPSEDIQAEGFEGELEP 264
>TOLB_ANAMM (Q5PBH8) Protein tolB precursor| Length = 441 Score = 28.5 bits (62), Expect = 7.7 Identities = 16/46 (34%), Positives = 21/46 (45%) Frame = +1 Query: 127 YQPCKHSVFFTGMEEGSPIGEGTWAAHPSRRTASSGGCAFQAPSWS 264 Y P K S+ F G P A ++R SSG + AP+WS Sbjct: 299 YSPDKKSIVFNSDRSGRPQLYVMNADGTNQRRISSGKGGYSAPAWS 344
>MOVP_TOBSV (P03597) Movement protein (MP) (Protein 3A)| Length = 289 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/36 (30%), Positives = 21/36 (58%) Frame = +2 Query: 143 TVSSSQEWRKDHPSARVLGPPILPVEQLPQAAVLSK 250 TV+ + + D +LGP ++P+EQ+P + S+ Sbjct: 246 TVTEIEPEKDDDAGTSILGPKMVPIEQVPSVKLSSE 281
>IF2_SYMTH (Q67P86) Translation initiation factor IF-2| Length = 1044 Score = 28.5 bits (62), Expect = 7.7 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = -3 Query: 423 ARPAAAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPP 310 A PAAA + G + T+ AQ P R+ G+G++S P Sbjct: 221 ATPAAAEQKPAGKAEQTAGAAQAKPARAEAGTGASSRP 258
>ENV_MPMV (P07575) Env polyprotein precursor (Coat polyprotein) [Contains:| Coat protein GP70; Coat protein GP20] Length = 586 Score = 28.5 bits (62), Expect = 7.7 Identities = 20/64 (31%), Positives = 30/64 (46%) Frame = -3 Query: 411 AAATRSHGASCSTS*HAQTTPPRSTNGSGSTSPPRPWRVTSSLPWRRPS*PTGRLESTAA 232 A + HG C + ++PP ++ + S S + VT+SL W+ S PT S Sbjct: 32 AEIQQKHGKPCDCAGGYVSSPPINSLTTVSCSTHTAYSVTNSLKWQCVSTPT--TPSNTH 89 Query: 231 *GSC 220 GSC Sbjct: 90 IGSC 93 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,975,242 Number of Sequences: 219361 Number of extensions: 1663258 Number of successful extensions: 5767 Number of sequences better than 10.0: 31 Number of HSP's better than 10.0 without gapping: 5380 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5760 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2628831825 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
