ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13b20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY106269.1| Zea mays PCO138212 mRNA sequence 347 2e-92
2gb|BT018162.1| Zea mays clone EL01N0556D07.c mRNA sequence 319 4e-84
3ref|XM_550155.1| Oryza sativa (japonica cultivar-group), mRNA 238 1e-59
4dbj|AK066325.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
5dbj|AK060948.1| Oryza sativa (japonica cultivar-group) cDNA clon... 238 1e-59
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
7dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
8dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic D... 188 1e-44
9ref|NM_115394.2| Arabidopsis thaliana CER10/ECR; 3-oxo-5-alpha-s... 96 1e-16
10gb|BT012066.1| Arabidopsis thaliana At3g55360 mRNA sequence 96 1e-16
11gb|AY081583.1| Arabidopsis thaliana glycoprotein-like (T22E16.2)... 96 1e-16
12gb|AY065136.1| Arabidopsis thaliana glycoprotein-like (T22E16.2)... 96 1e-16
13emb|BX826269.1|CNS0A4Y2 Arabidopsis thaliana Full-length cDNA Co... 96 1e-16
14emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, B... 94 5e-16
15gb|AY088452.1| Arabidopsis thaliana clone 6774 mRNA, complete se... 88 3e-14
16emb|AJ515556.1|CAR515556 Cicer arietinum mRNA for steroid 5-alph... 50 0.006
17gb|AE004700.1| Pseudomonas aeruginosa PAO1, section 261 of 529 o... 42 1.5
18gb|AY946230.1| Hordeum vulgare subsp. vulgare 3' flanking sequen... 42 1.5
19gb|U48208.1|HIV1U48208 Human immunodeficiency virus type 1 clone... 42 1.5
20gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf... 42 1.5
21gb|M75151.1|RATDNA Rattus norvegicus DNA 42 1.5
22gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence 40 5.9
23gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 5.9
24ref|XM_473416.1| Oryza sativa (japonica cultivar-group), predic... 40 5.9
25emb|CR701735.2|CNS0G4ER Tetraodon nigroviridis full-length cDNA 40 5.9
26emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4,... 40 5.9
27emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in... 40 5.9
28gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complet... 40 5.9
29gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex B... 40 5.9
30gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex M... 40 5.9
31gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, comple... 40 5.9
32dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
33dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 5.9
34gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, c... 40 5.9
35gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complet... 40 5.9
36dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 5.9
37dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.9
38emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 i... 40 5.9
39gb|AE015451.1| Pseudomonas putida KT2440 complete genome 40 5.9 
>gb|AY106269.1| Zea mays PCO138212 mRNA sequence
          Length = 1343

 Score =  347 bits (175), Expect = 2e-92
 Identities = 262/291 (90%)
 Strand = Plus / Minus

                                                                        
Query: 150  cttcttcacaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatcc 209
            |||||||||||||| ||||| || |||||||| ||||||||||||||||||| |||||||
Sbjct: 1223 cttcttcacaggaacggagggagaatcacccaccggcgagggtacttgggcctcccatcc 1164

                                                                        
Query: 210  ttcccgtcgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatg 269
            || ||||| ||||||||| |||| ||||||||||| || |||||||||||||||||||||
Sbjct: 1163 ttgccgtcaaacagcttcttcagacggctgtgcttgccgagcgcccagttggtcatgatg 1104

                                                                        
Query: 270  gccgccgccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccg 329
             ||||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||
Sbjct: 1103 cccgccgccacgacaaggaagacgtaacctgccacggtctgtgtggcgatgttgaagccg 1044

                                                                        
Query: 330  agccattggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccc 389
            | ||| |||||||||||||||||||| || ||||| |||||||||||||||| ||| || 
Sbjct: 1043 acccactggtagatctcggtggtgtaattggcgcaggtcacgatgttgaacaagaaaccg 984

                                                               
Query: 390  cgtgggatctggtagccgccgctgccggtcgggctcctgaggttcctcagc 440
            || ||||||||||| |||||||||||| | |||||||||||||||| ||||
Sbjct: 983  cgggggatctggtacccgccgctgccgcttgggctcctgaggttccgcagc 933
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>gb|BT018162.1| Zea mays clone EL01N0556D07.c mRNA sequence
          Length = 1165

 Score =  319 bits (161), Expect = 4e-84
 Identities = 257/289 (88%)
 Strand = Plus / Minus

                                                                        
Query: 152  tcttcacaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatcctt 211
            |||||||||||| ||||| || |||||||| ||||||||||||||||||| |||||||||
Sbjct: 1038 tcttcacaggaacggagggagaatcacccaccggcgagggtacttgggcctcccatcctt 979

                                                                        
Query: 212  cccgtcgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggc 271
             ||||| ||||||||| |||| |||||||| || || ||||||||||||||||||||| |
Sbjct: 978  gccgtcaaacagcttcttcagacggctgtgtttgccgagcgcccagttggtcatgatgcc 919

                                                                        
Query: 272  cgccgccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgag 331
             ||||||||| |||||||||||||||| ||||||||||| |||||||||||||| |||| 
Sbjct: 918  tgccgccacgacaaggaagacgtaacctgccacggtctgtgtggcgatgttgaagccgac 859

                                                                        
Query: 332  ccattggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccg 391
            ||| |||||||||||||||||||| || ||||| |||||||||||||||| ||| || ||
Sbjct: 858  ccactggtagatctcggtggtgtaattggcgcaggtcacgatgttgaacaagaacccgcg 799

                                                             
Query: 392  tgggatctggtagccgccgctgccggtcgggctcctgaggttcctcagc 440
             ||||||||||| || ||||||||| | |||||||||||||||| ||||
Sbjct: 798  ggggatctggtaccctccgctgccgcttgggctcctgaggttccgcagc 750
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>ref|XM_550155.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1226

 Score =  238 bits (120), Expect = 1e-59
 Identities = 243/284 (85%)
 Strand = Plus / Minus

                                                                        
Query: 157  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 1017 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 958

                                                                        
Query: 217  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 276
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 957  cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 898

                                                                        
Query: 277  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 336
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 897  ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 838

                                                                        
Query: 337  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 396
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 837  ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 778

                                                        
Query: 397  tctggtagccgccgctgccggtcgggctcctgaggttcctcagc 440
            |||| ||||| ||| | ||  |||| || |||||||||||||||
Sbjct: 777  tctgatagccaccgttaccactcggacttctgaggttcctcagc 734
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>dbj|AK066325.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013062L06, full
            insert sequence
          Length = 3501

 Score =  238 bits (120), Expect = 1e-59
 Identities = 243/284 (85%)
 Strand = Plus / Minus

                                                                        
Query: 157  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 3206 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 3147

                                                                        
Query: 217  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 276
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 3146 cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 3087

                                                                        
Query: 277  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 336
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 3086 ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 3027

                                                                        
Query: 337  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 396
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 3026 ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 2967

                                                        
Query: 397  tctggtagccgccgctgccggtcgggctcctgaggttcctcagc 440
            |||| ||||| ||| | ||  |||| || |||||||||||||||
Sbjct: 2966 tctgatagccaccgttaccactcggacttctgaggttcctcagc 2923
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>dbj|AK060948.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-F04, full
            insert sequence
          Length = 1221

 Score =  238 bits (120), Expect = 1e-59
 Identities = 243/284 (85%)
 Strand = Plus / Minus

                                                                        
Query: 157  acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
            |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 1012 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 953

                                                                        
Query: 217  cgaacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccg 276
            |||||| |||| | || |||| |||||||||||| |||||||||||||||||   ||| |
Sbjct: 952  cgaacaacttctttagacggcggtgctttccaagtgcccagttggtcatgatactcgctg 893

                                                                        
Query: 277  ccacggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccatt 336
            ||||  ||||||||| |||||| ||||| ||||| ||||| ||||||||||| |||||||
Sbjct: 892  ccacaacaaggaagatgtaacctgccacagtctgtgtggcaatgttgaacccaagccatt 833

                                                                        
Query: 337  ggtagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtggga 396
            |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| || || |
Sbjct: 832  ggtagatctcagtggtatagtttgcgcatgtcactatgttgaacaggaagccacgaggaa 773

                                                        
Query: 397  tctggtagccgccgctgccggtcgggctcctgaggttcctcagc 440
            |||| ||||| ||| | ||  |||| || |||||||||||||||
Sbjct: 772  tctgatagccaccgttaccactcggacttctgaggttcctcagc 729
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  188 bits (95), Expect = 1e-44
 Identities = 179/207 (86%)
 Strand = Plus / Plus

                                                                           
Query: 234     cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 293
               |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 2707081 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 2707140

                                                                           
Query: 294     taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 353
               ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 2707141 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 2707200

                                                                           
Query: 354     tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 413
               ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 2707201 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 2707260

                                          
Query: 414     ccggtcgggctcctgaggttcctcagc 440
               ||  |||| || |||||||||||||||
Sbjct: 2707261 ccactcggacttctgaggttcctcagc 2707287



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                           
Query: 157     acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
               |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 2706918 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 2706977

                     
Query: 217     cgaaca 222
               ||||||
Sbjct: 2706978 cgaaca 2706983
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>dbj|AP002540.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0434B04
          Length = 167029

 Score =  188 bits (95), Expect = 1e-44
 Identities = 179/207 (86%)
 Strand = Plus / Plus

                                                                          
Query: 234    cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 293
              |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 156856 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 156915

                                                                          
Query: 294    taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 353
              ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 156916 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 156975

                                                                          
Query: 354    tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 413
              ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 156976 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 157035

                                         
Query: 414    ccggtcgggctcctgaggttcctcagc 440
              ||  |||| || |||||||||||||||
Sbjct: 157036 ccactcggacttctgaggttcctcagc 157062



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                          
Query: 157    acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
              |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 156693 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 156752

                    
Query: 217    cgaaca 222
              ||||||
Sbjct: 156753 cgaaca 156758
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>dbj|AP002522.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0009G03
          Length = 163526

 Score =  188 bits (95), Expect = 1e-44
 Identities = 179/207 (86%)
 Strand = Plus / Plus

                                                                         
Query: 234   cggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaaggaagacg 293
             |||| |||||||||||| |||||||||||||||||   ||| |||||  ||||||||| |
Sbjct: 12758 cggcggtgctttccaagtgcccagttggtcatgatactcgctgccacaacaaggaagatg 12817

                                                                         
Query: 294   taacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcggtggtg 353
             ||||| ||||| ||||| ||||| ||||||||||| ||||||||||||||||| ||||| 
Sbjct: 12818 taacctgccacagtctgtgtggcaatgttgaacccaagccattggtagatctcagtggta 12877

                                                                         
Query: 354   tagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagccgccgctg 413
             ||||||||||||||||| ||||||||||||||||| || || ||||| ||||| ||| | 
Sbjct: 12878 tagtttgcgcatgtcactatgttgaacaggaagccacgaggaatctgatagccaccgtta 12937

                                        
Query: 414   ccggtcgggctcctgaggttcctcagc 440
             ||  |||| || |||||||||||||||
Sbjct: 12938 ccactcggacttctgaggttcctcagc 12964



 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 157   acaggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgt 216
             |||||||||| ||||| ||||||||||| ||||| ||||| |||| ||| ||||| || |
Sbjct: 12595 acaggaatggtggaagaatcacccatcgccgaggatacttcggcctcccttccttgccat 12654

                   
Query: 217   cgaaca 222
             ||||||
Sbjct: 12655 cgaaca 12660
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>ref|NM_115394.2| Arabidopsis thaliana CER10/ECR; 3-oxo-5-alpha-steroid
            4-dehydrogenase/ fatty acid elongase AT3G55360
            (CER10/ECR) mRNA, complete cds
          Length = 1319

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                        
Query: 159  aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
            |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 1059 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 1000

                                                                        
Query: 219  aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
            || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 999  aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 940

                                                                        
Query: 279  acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
            || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 939  acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 880

                                                                        
Query: 339  tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
            || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 879  taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 820

                    
Query: 399  tggtagcc 406
            ||||||||
Sbjct: 819  tggtagcc 812
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>gb|BT012066.1| Arabidopsis thaliana At3g55360 mRNA sequence
          Length = 930

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 159 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 926 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 867

                                                                       
Query: 219 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 866 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 807

                                                                       
Query: 279 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 806 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 747

                                                                       
Query: 339 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 746 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 687

                   
Query: 399 tggtagcc 406
           ||||||||
Sbjct: 686 tggtagcc 679
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>gb|AY081583.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete
           cds
          Length = 1134

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 159 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 929 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 870

                                                                       
Query: 219 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 869 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 810

                                                                       
Query: 279 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 809 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 750

                                                                       
Query: 339 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 749 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 690

                   
Query: 399 tggtagcc 406
           ||||||||
Sbjct: 689 tggtagcc 682
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>gb|AY065136.1| Arabidopsis thaliana glycoprotein-like (T22E16.2) mRNA, complete
           cds
          Length = 1218

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 159 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 964 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 905

                                                                       
Query: 219 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 904 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 845

                                                                       
Query: 279 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 844 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 785

                                                                       
Query: 339 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 784 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 725

                   
Query: 399 tggtagcc 406
           ||||||||
Sbjct: 724 tggtagcc 717
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>emb|BX826269.1|CNS0A4Y2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL95ZE06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1098

 Score = 95.6 bits (48), Expect = 1e-16
 Identities = 198/248 (79%)
 Strand = Plus / Minus

                                                                       
Query: 159 aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
           |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 961 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 902

                                                                       
Query: 219 aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
           || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 901 aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 842

                                                                       
Query: 279 acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
           || || ||||| || || || || | |||||| || ||||||||||| || |||||||||
Sbjct: 841 acagcgaggaaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattgg 782

                                                                       
Query: 339 tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
           || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 781 taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 722

                   
Query: 399 tggtagcc 406
           ||||||||
Sbjct: 721 tggtagcc 714
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>emb|AL132975.1|ATT22E16 Arabidopsis thaliana DNA chromosome 3, BAC clone T22E16
          Length = 103240

 Score = 93.7 bits (47), Expect = 5e-16
 Identities = 146/179 (81%)
 Strand = Plus / Plus

                                                                        
Query: 228  ctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgccacggcaagg 287
            ||||| ||||||||||||||||| ||||| || ||||||||    || || || || |||
Sbjct: 3825 ctcagacggctgtgctttccaagagcccaattagtcatgattagagcagcaacagcgagg 3884

                                                                        
Query: 288  aagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattggtagatctcg 347
            || || || || || | |||||| || ||||||||||| || ||||||||||| ||||||
Sbjct: 3885 aaaacatatcctgcaatggtctgagtagcgatgttgaatcctagccattggtaaatctcg 3944

                                                                       
Query: 348  gtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatctggtagcc 406
            || ||||| || || ||||| || |||||||| ||||| || ||||| |||||||||||
Sbjct: 3945 gtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatctggtagcc 4003



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 159  aggaatggaggaaggatcacccatc 183
            |||||||||||||| ||||||||||
Sbjct: 3664 aggaatggaggaagtatcacccatc 3688
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>gb|AY088452.1| Arabidopsis thaliana clone 6774 mRNA, complete sequence
          Length = 1311

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 197/248 (79%)
 Strand = Plus / Minus

                                                                        
Query: 159  aggaatggaggaaggatcacccatcggcgagggtacttgggccgcccatccttcccgtcg 218
            |||||||||||||| ||||||||||  |  || ||||| |||   ||||| || || || 
Sbjct: 1056 aggaatggaggaagtatcacccatcttcttggatactttggctttccatcttttccatca 997

                                                                        
Query: 219  aacagcttcctcaggcggctgtgctttccaagcgcccagttggtcatgatggccgccgcc 278
            || | ||| ||||| ||||||||||||||||| ||||| || ||||||||    || || 
Sbjct: 996  aatatctttctcagacggctgtgctttccaagagcccaattagtcatgattagagcagca 937

                                                                        
Query: 279  acggcaaggaagacgtaacccgccacggtctgggtggcgatgttgaacccgagccattgg 338
            || || ||||| || || || || | |||||| || || |||||||| || |||||||||
Sbjct: 936  acagcgaggaaaacatatcctgcaatggtctgagtagcaatgttgaatcctagccattgg 877

                                                                        
Query: 339  tagatctcggtggtgtagtttgcgcatgtcacgatgttgaacaggaagccccgtgggatc 398
            || |||||||| ||||| || || ||||| || |||||||| ||||| || ||||| |||
Sbjct: 876  taaatctcggtagtgtaattggcacatgtaacaatgttgaagaggaaaccgcgtggaatc 817

                    
Query: 399  tggtagcc 406
            ||||||||
Sbjct: 816  tggtagcc 809
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>emb|AJ515556.1|CAR515556 Cicer arietinum mRNA for steroid 5-alpha reductase (sr5a gene)
          Length = 1336

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                        
Query: 224 cttcctcaggcggctgtgctttccaagcgcccagttggtcatgat 268
           |||| ||| ||| ||||||||| |||| |||||||||||||||||
Sbjct: 974 cttcttcaagcgcctgtgctttgcaagagcccagttggtcatgat 930
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>gb|AE004700.1| Pseudomonas aeruginosa PAO1, section 261 of 529 of the complete
            genome
          Length = 16118

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 404  gccgccgctgccggtcgggct 424
            |||||||||||||||||||||
Sbjct: 2836 gccgccgctgccggtcgggct 2816
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>gb|AY946230.1| Hordeum vulgare subsp. vulgare 3' flanking sequence from Ds
           insertion in TNP-32B
          Length = 1007

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 154 ttcacaggaatggaggaagga 174
           |||||||||||||||||||||
Sbjct: 167 ttcacaggaatggaggaagga 147
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>gb|U48208.1|HIV1U48208 Human immunodeficiency virus type 1 clone 11 sample IV envelope
           glycoprotein (env) gene, C2-V5 region, partial cds
          Length = 660

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 340 agatctcggtggtgtagtttg 360
           |||||||||||||||||||||
Sbjct: 619 agatctcggtggtgtagtttg 599
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>gb|L36679.1|AMLUNA Amycolatopsis methanolica plasmid pMEA300 stf gene, complete cds
          Length = 13285

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 403  agccgccgctgccggtcgggc 423
            |||||||||||||||||||||
Sbjct: 4138 agccgccgctgccggtcgggc 4118
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>gb|M75151.1|RATDNA Rattus norvegicus DNA
          Length = 4931

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 109 aaatgttgaatctctagatac 129
           |||||||||||||||||||||
Sbjct: 856 aaatgttgaatctctagatac 836
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>gb|AC152117.2| Pichia stipitis clone JGIAHYZ-5A1, complete sequence
          Length = 34078

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    acataattgaggtttgacag 29
             ||||||||||||||||||||
Sbjct: 23203 acataattgaggtttgacag 23184
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 301    ccacggtctgggtggcgatg 320
              ||||||||||||||||||||
Sbjct: 455773 ccacggtctgggtggcgatg 455754
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>ref|XM_473416.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2652

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 403 agccgccgctgccggtcgggctcc 426
           |||||||||| |||||||||||||
Sbjct: 38  agccgccgcttccggtcgggctcc 15
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>emb|CR701735.2|CNS0G4ER Tetraodon nigroviridis full-length cDNA
          Length = 1495

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 264 atgatggccgccgccacggc 283
           ||||||||||||||||||||
Sbjct: 896 atgatggccgccgccacggc 915
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>emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17,
             complete sequence
          Length = 127259

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 403   agccgccgctgccggtcgggctcc 426
             |||||||||| |||||||||||||
Sbjct: 56858 agccgccgcttccggtcgggctcc 56881
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>emb|BX511073.3| Zebrafish DNA sequence from clone DKEY-245I10 in linkage group 8,
             complete sequence
          Length = 218866

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 304   cggtctgggtggcgatgttg 323
             ||||||||||||||||||||
Sbjct: 99157 cggtctgggtggcgatgttg 99176
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>gb|AC093258.2| Homo sapiens chromosome 5 clone RP11-1E3, complete sequence
          Length = 151202

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    aacactggaacagaataaat 112
             ||||||||||||||||||||
Sbjct: 88947 aacactggaacagaataaat 88966
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>gb|AC148698.1| Macaca mulatta Major Histocompatibility Complex BAC MMU268P23, complete
              sequence
          Length = 185838

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 221    cagcttcctcaggcggctgt 240
              ||||||||||||||||||||
Sbjct: 146241 cagcttcctcaggcggctgt 146222
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>gb|AC148682.1| Macaca mulatta Major Histocompatibility Complex MMU151L13, complete
            sequence
          Length = 199819

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 221  cagcttcctcaggcggctgt 240
            ||||||||||||||||||||
Sbjct: 2620 cagcttcctcaggcggctgt 2601
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>gb|AC146538.2| Gasterosteus aculeatus clone CH213-118G22, complete sequence
          Length = 211945

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 262   tcatgatggccgccgccacg 281
             ||||||||||||||||||||
Sbjct: 44879 tcatgatggccgccgccacg 44860
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 403      agccgccgctgccggtcgggctcc 426
                |||||||||| |||||||||||||
Sbjct: 27532882 agccgccgcttccggtcgggctcc 27532905
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     cagcttcctcaggcggctgt 240
               ||||||||||||||||||||
Sbjct: 3263120 cagcttcctcaggcggctgt 3263139
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>gb|AC073624.28| Homo sapiens chromosome 17, clone RP11-537K14, complete sequence
          Length = 145512

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 124   agataccagccttgcaagca 143
             ||||||||||||||||||||
Sbjct: 31611 agataccagccttgcaagca 31592
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>gb|AC011750.8| Homo sapiens BAC clone RP11-458C9 from 2, complete sequence
          Length = 139166

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 93    aacactggaacagaataaatgttg 116
             |||||||||||| |||||||||||
Sbjct: 53954 aacactggaacaaaataaatgttg 53977
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 274     ccgccacggcaaggaagacg 293
               ||||||||||||||||||||
Sbjct: 2510070 ccgccacggcaaggaagacg 2510089
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 301     ccacggtctgggtggcgatg 320
               ||||||||||||||||||||
Sbjct: 1510673 ccacggtctgggtggcgatg 1510654
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>emb|AL935283.16| Zebrafish DNA sequence from clone CH211-247O1 in linkage group 7,
              complete sequence
          Length = 197927

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 304    cggtctgggtggcgatgttg 323
              ||||||||||||||||||||
Sbjct: 170816 cggtctgggtggcgatgttg 170797
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 398     ctggtagccgccgctgccgg 417
               ||||||||||||||||||||
Sbjct: 1724509 ctggtagccgccgctgccgg 1724528


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,428,252
Number of Sequences: 3902068
Number of extensions: 3428252
Number of successful extensions: 68362
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67997
Number of HSP's gapped (non-prelim): 365
length of query: 440
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 418
effective length of database: 17,147,199,772
effective search space: 7167529504696
effective search space used: 7167529504696
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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