ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13b19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK065082.1| Oryza sativa (japonica cultivar-group) cDNA clon... 200 4e-48
2ref|XM_470977.1| Oryza sativa (japonica cultivar-group), predic... 192 1e-45
3gb|AY224557.1| Oryza sativa (japonica cultivar-group) isolate 26... 192 1e-45
4dbj|AK104546.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
5dbj|AK104634.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
6dbj|AK104254.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
7dbj|AK060872.1| Oryza sativa (japonica cultivar-group) cDNA clon... 192 1e-45
8dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 127 5e-26
9emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 127 5e-26
10emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4,... 127 5e-26
11gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, com... 42 2.3
12gb|BC021339.1| Mus musculus acyl-Coenzyme A oxidase 2, branched ... 42 2.3
13emb|AJ238492.1|MMU238492 Mus musculus mRNA for trihydroxycoprost... 42 2.3
14dbj|AK144243.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full... 42 2.3
15gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence 42 2.3
16gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 2.3
17emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chr... 42 2.3
18ref|NM_053115.1| Mus musculus acyl-Coenzyme A oxidase 2, branche... 42 2.3
19gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 9.1
20ref|XM_362224.1| Magnaporthe grisea 70-15 predicted protein (MG0... 40 9.1
21ref|XM_459107.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 9.1
22gb|BC047144.1| Mus musculus syndecan 2, mRNA (cDNA clone MGC:547... 40 9.1
23gb|AC110243.9| Mus musculus chromosome 15, clone RP23-246C6, com... 40 9.1
24ref|NM_008304.1| Mus musculus syndecan 2 (Sdc2), mRNA 40 9.1
25gb|BC003929.1| Mus musculus syndecan 2, mRNA (cDNA clone IMAGE:3... 40 9.1
26gb|AC129537.8| Mus musculus chromosome 15, clone RP23-238H13, co... 40 9.1
27emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chr... 40 9.1
28gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, co... 40 9.1
29emb|AL035446.4|HS460G2 Human DNA sequence from clone RP3-460G2 o... 40 9.1
30emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS... 40 9.1
31gb|AC156555.8| Mus musculus chromosome 7, clone RP23-59P20, comp... 40 9.1
32gb|BC070890.1| Rattus norvegicus syndecan 2, mRNA (cDNA clone MG... 40 9.1
33dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 40 9.1
34gb|AE011928.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 9.1
35gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, co... 40 9.1
36emb|BX784026.17| Zebrafish DNA sequence from clone CH211-66P13 i... 40 9.1
37dbj|AK011042.1| Mus musculus 13 days embryo liver cDNA, RIKEN fu... 40 9.1
38dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
39ref|NM_013082.2| Rattus norvegicus syndecan 2 (Sdc2), mRNA 40 9.1
40dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic D... 40 9.1
41ref|XM_316058.2| Anopheles gambiae str. PEST ENSANGP00000010743 ... 40 9.1
42dbj|AK108591.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
43dbj|AK102074.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 9.1
44gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 40 9.1
45dbj|AP001829.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.1
46gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, comple... 40 9.1
47dbj|AP007300.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 9.1
48emb|X98522.1|BTFCGRIII B.taurus FcgammaRIII intron 4 40 9.1
49gb|M81687.1|RATHSPG Rat core protein (HSPG) mRNA, complete cds 40 9.1
50gb|U00674.1|U00674 Mus musculus NMRI fibroglycan (syndecan-2) ge... 40 9.1 
>dbj|AK065082.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001L09, full
           insert sequence
          Length = 1020

 Score =  200 bits (101), Expect = 4e-48
 Identities = 329/405 (81%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 764 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 705

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 704 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 645

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 644 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 585

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || ||||| ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 584 tctttgtgaggcgttccttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 525

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 524 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 465

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 464 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 405

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 404 gctggttgagcctggggcggagcctgccgatctctacctcgatct 360



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 29  gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
           |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 978 gtatatgttggtggtacaagtatatgattgtacaatttctc 938
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>ref|XM_470977.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 756

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 754 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 695

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 694 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 635

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 634 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 575

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 574 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 515

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 514 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 455

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 454 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 395

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 394 gctggttgagcctggggcggagcctgccgatctctacctcgatct 350
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>gb|AY224557.1| Oryza sativa (japonica cultivar-group) isolate 26688 unknown mRNA
          Length = 756

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 754 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 695

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 694 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 635

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 634 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 575

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 574 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 515

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 514 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 455

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 454 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 395

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 394 gctggttgagcctggggcggagcctgccgatctctacctcgatct 350
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>dbj|AK104546.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-C04, full
           insert sequence
          Length = 1051

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 783 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 724

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 723 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 664

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 663 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 604

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 603 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 544

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 543 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 484

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 483 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 424

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 423 gctggttgagcctggggcggagcctgccgatctctacctcgatct 379



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 29  gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
           |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 997 gtatatgttggtggtacaagtatatgattgtacaatttctc 957
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>dbj|AK104634.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D01, full
           insert sequence
          Length = 1024

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 783 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 724

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 723 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 664

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 663 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 604

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 603 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 544

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 543 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 484

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 483 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 424

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 423 gctggttgagcctggggcggagcctgccgatctctacctcgatct 379



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                    
Query: 29  gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
           |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 997 gtatatgttggtggtacaagtatatgattgtacaatttctc 957
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>dbj|AK104254.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-C07, full
           insert sequence
          Length = 1056

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 795 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 736

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 735 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 676

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 675 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 616

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 615 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 556

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 555 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 496

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 495 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 436

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 435 gctggttgagcctggggcggagcctgccgatctctacctcgatct 391



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 29   gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
            |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 1009 gtatatgttggtggtacaagtatatgattgtacaatttctc 969
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>dbj|AK060872.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-H11, full
           insert sequence
          Length = 1052

 Score =  192 bits (97), Expect = 1e-45
 Identities = 328/405 (80%)
 Strand = Plus / Minus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 802 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 743

                                                                       
Query: 320 cctggttactcgccttggcgctccctatgttctcgtcgagaagcgtcaatatggacatgt 379
           |||| ||  | | |||||||||  |||| || || ||||| || || | |||||||||||
Sbjct: 742 cctgattgttggtcttggcgcttgctatattttcatcgaggagtgttagtatggacatgt 683

                                                                       
Query: 380 tgagctcgttccgttcgaccatgtcgagcagtgttttcttcctatctttggattgcagga 439
           ||||||| |||||||| ||||| || || |||||    ||  | ||  | ||||||||||
Sbjct: 682 tgagctcattccgttcaaccatttcaagaagtgtcgattttttgtcgcttgattgcagga 623

                                                                       
Query: 440 tgttggtgagccgctccttggccgtcacgaggtcgttttgcagcttgtcgtaggcctcga 499
           | || ||||| || || || ||  | || ||||| ||||||| |||||| |||||||| |
Sbjct: 622 tctttgtgaggcgttctttcgcgctgacaaggtcattttgcaacttgtcataggcctcca 563

                                                                       
Query: 500 ctccctcgccgatgaccttctgcatcgcttccagctcgatcagcctgtcttcgtttgccg 559
           |||||||    |  ||||| ||||||||||||| ||||||||  | ||| ||  || |||
Sbjct: 562 ctccctcaagcagaaccttttgcatcgcttccaactcgatcaatcggtcctccatttccg 503

                                                                       
Query: 560 cagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaagaagg 619
           | ||||||||||  | |||||||||||| |||||||| |||||||||| |||||||||||
Sbjct: 502 ctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaagaagg 443

                                                        
Query: 620 ccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 442 gctggttgagcctggggcggagcctgccgatctctacctcgatct 398



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 29   gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
            |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 1016 gtatatgttggtggtacaagtatatgattgtacaatttctc 976
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4,
              complete sequence
          Length = 35498469

 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                          
Query: 557    ccgcagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaaga 616
              |||| ||||||||||  | |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 362309 ccgctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaaga 362368

                                                              
Query: 617    aggccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
              ||| || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 362369 agggctggttgagcctggggcggagcctgccgatctctacctcgatct 362416



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                          
Query: 260    atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
              ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 361584 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 361643

                  
Query: 320    cctg 323
              ||||
Sbjct: 361644 cctg 361647



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                               
Query: 369    tatggacatgttgagctcgttccgttcgaccat 401
              |||||||||||||||||| |||||||| |||||
Sbjct: 361813 tatggacatgttgagctcattccgttcaaccat 361845



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 29     gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
              |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 361370 gtatatgttggtggtacaagtatatgattgtacaatttctc 361410



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 514    accttctgcatcgcttccagctcgatca 541
              ||||| ||||||||||||| ||||||||
Sbjct: 362176 accttttgcatcgcttccaactcgatca 362203
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>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                         
Query: 557   ccgcagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaaga 616
             |||| ||||||||||  | |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 46968 ccgctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaaga 47027

                                                             
Query: 617   aggccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
             ||| || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 47028 agggctggttgagcctggggcggagcctgccgatctctacctcgatct 47075



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                         
Query: 260   atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
             ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 46243 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 46302

                 
Query: 320   cctg 323
             ||||
Sbjct: 46303 cctg 46306



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                              
Query: 369   tatggacatgttgagctcgttccgttcgaccat 401
             |||||||||||||||||| |||||||| |||||
Sbjct: 46472 tatggacatgttgagctcattccgttcaaccat 46504



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 29    gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
             |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 46029 gtatatgttggtggtacaagtatatgattgtacaatttctc 46069



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 514   accttctgcatcgcttccagctcgatca 541
             ||||| ||||||||||||| ||||||||
Sbjct: 46835 accttttgcatcgcttccaactcgatca 46862
to top
>emb|AL606620.3|OSJN00065 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085F13,
            complete sequence
          Length = 130249

 Score =  127 bits (64), Expect = 5e-26
 Identities = 97/108 (89%)
 Strand = Plus / Plus

                                                                        
Query: 557  ccgcagttcgggtgacggcgaacttgatctgcgcgatctcccgctggatgtggtcgaaga 616
            |||| ||||||||||  | |||||||||||| |||||||| |||||||||| ||||||||
Sbjct: 1061 ccgctgttcgggtgattgagaacttgatctgggcgatctcgcgctggatgtagtcgaaga 1120

                                                            
Query: 617  aggccttgttgagcctggggcggagcctgccgatctcgatctcgatct 664
            ||| || |||||||||||||||||||||||||||||| | ||||||||
Sbjct: 1121 agggctggttgagcctggggcggagcctgccgatctctacctcgatct 1168



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 56/64 (87%)
 Strand = Plus / Plus

                                                                       
Query: 260 atactgttatgtatttcaacatagatgagcgcacatcctccatgaaagccacagcttcct 319
           ||||||| || |||||||  || |||||||| |||| ||||||||||||||||||||| |
Sbjct: 336 atactgtaatatatttcaggatggatgagcgaacattctccatgaaagccacagcttctt 395

               
Query: 320 cctg 323
           ||||
Sbjct: 396 cctg 399



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 31/33 (93%)
 Strand = Plus / Plus

                                            
Query: 369 tatggacatgttgagctcgttccgttcgaccat 401
           |||||||||||||||||| |||||||| |||||
Sbjct: 565 tatggacatgttgagctcattccgttcaaccat 597



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                    
Query: 29  gtatttgttcgtggtacaagtatacggttgtacaatttctc 69
           |||| |||| |||||||||||||| | ||||||||||||||
Sbjct: 122 gtatatgttggtggtacaagtatatgattgtacaatttctc 162



 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 514 accttctgcatcgcttccagctcgatca 541
           ||||| ||||||||||||| ||||||||
Sbjct: 928 accttttgcatcgcttccaactcgatca 955
to top
>gb|AC100506.17| Mus musculus chromosome 9, clone RP23-144D3, complete sequence
          Length = 198388

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 181    cattgatttgaacaactatgt 201
              |||||||||||||||||||||
Sbjct: 114937 cattgatttgaacaactatgt 114917
to top
>gb|BC021339.1| Mus musculus acyl-Coenzyme A oxidase 2, branched chain, mRNA (cDNA
           clone MGC:29247 IMAGE:5052291), complete cds
          Length = 2466

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 aggatgttggtgagccgctcc 456
           |||||||||||||||||||||
Sbjct: 270 aggatgttggtgagccgctcc 250
to top
>emb|AJ238492.1|MMU238492 Mus musculus mRNA for trihydroxycoprostanoyl-CoA oxidase encoded by
           ACOX2 gene
          Length = 2499

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 aggatgttggtgagccgctcc 456
           |||||||||||||||||||||
Sbjct: 308 aggatgttggtgagccgctcc 288
to top
>dbj|AK144243.1| Mus musculus kidney CCL-142 RAG cDNA, RIKEN full-length enriched
           library, clone:G430148I04 product:acyl-Coenzyme A
           oxidase 2, branched chain, full insert sequence
          Length = 2441

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 aggatgttggtgagccgctcc 456
           |||||||||||||||||||||
Sbjct: 260 aggatgttggtgagccgctcc 240
to top
>gb|AC100782.2| Homo sapiens, clone RP11-300E4, complete sequence
          Length = 185123

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 103   tatgaaacagagcaactaaatataa 127
             ||||||||||||||||||| |||||
Sbjct: 67230 tatgaaacagagcaactaactataa 67254
to top
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 503     cctcgccgatgaccttctgca 523
               |||||||||||||||||||||
Sbjct: 3945348 cctcgccgatgaccttctgca 3945328
to top
>emb|CT025547.17| Mouse DNA sequence from clone RP24-111B7 on chromosome 14, complete
             sequence
          Length = 178908

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 436   aggatgttggtgagccgctcc 456
             |||||||||||||||||||||
Sbjct: 43242 aggatgttggtgagccgctcc 43262
to top
>ref|NM_053115.1| Mus musculus acyl-Coenzyme A oxidase 2, branched chain (Acox2),
           mRNA
          Length = 2499

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 436 aggatgttggtgagccgctcc 456
           |||||||||||||||||||||
Sbjct: 308 aggatgttggtgagccgctcc 288
to top
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 536    cgatcagcctgtcttcgttt 555
              ||||||||||||||||||||
Sbjct: 915271 cgatcagcctgtcttcgttt 915290
to top
>ref|XM_362224.1| Magnaporthe grisea 70-15 predicted protein (MG04669.4) partial cds
          Length = 2403

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 645 gccgatctcgatctcgatct 664
           ||||||||||||||||||||
Sbjct: 647 gccgatctcgatctcgatct 666
to top
>ref|XM_459107.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0D15730g)
            partial mRNA
          Length = 2793

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 599  gctggatgtggtcgaagaag 618
            ||||||||||||||||||||
Sbjct: 1131 gctggatgtggtcgaagaag 1150
to top
>gb|BC047144.1| Mus musculus syndecan 2, mRNA (cDNA clone MGC:54764 IMAGE:6395969),
            complete cds
          Length = 1854

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1252 catggaattgatttgaacatctatgtgc 1279
to top
>gb|AC110243.9| Mus musculus chromosome 15, clone RP23-246C6, complete sequence
          Length = 179988

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 176 catggcattgatttgaacaactatgtgc 203
           ||||| ||||||||||||| ||||||||
Sbjct: 126 catggaattgatttgaacatctatgtgc 153
to top
>ref|NM_008304.1| Mus musculus syndecan 2 (Sdc2), mRNA
          Length = 3311

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1386 catggaattgatttgaacatctatgtgc 1413
to top
>gb|BC003929.1| Mus musculus syndecan 2, mRNA (cDNA clone IMAGE:3485557), partial
           cds
          Length = 2731

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 176 catggcattgatttgaacaactatgtgc 203
           ||||| ||||||||||||| ||||||||
Sbjct: 785 catggaattgatttgaacatctatgtgc 812
to top
>gb|AC129537.8| Mus musculus chromosome 15, clone RP23-238H13, complete sequence
          Length = 215416

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 176    catggcattgatttgaacaactatgtgc 203
              ||||| ||||||||||||| ||||||||
Sbjct: 105351 catggaattgatttgaacatctatgtgc 105324
to top
>emb|AL355593.21| Human DNA sequence from clone RP11-99E24 on chromosome Xq21.32-22.3
             Contains the PCDH19 gene for protocadherin 19 protein and
             a CpG island, complete sequence
          Length = 168065

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 210   caagtccaatgccagagata 229
             ||||||||||||||||||||
Sbjct: 86158 caagtccaatgccagagata 86139
to top
>gb|AC113194.8| Homo sapiens chromosome 8, clone RP11-1070A24, complete sequence
          Length = 166015

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 264    tgttatgtatttcaacatag 283
              ||||||||||||||||||||
Sbjct: 150716 tgttatgtatttcaacatag 150735
to top
>emb|AL035446.4|HS460G2 Human DNA sequence from clone RP3-460G2 on chromosome 6q24.1-24.3
             Contains a novel gene and part of a 40s ribosomal protein
             S3a (v-fos transformation effector protein 1)
             (RPS3A)(FTE1) pseudogene, complete sequence
          Length = 102552

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ctgttatgtatttcaacata 282
             ||||||||||||||||||||
Sbjct: 84306 ctgttatgtatttcaacata 84287
to top
>emb|CR382136.1| Debaryomyces hansenii chromosome D of strain CBS767 of Debaryomyces
               hansenii
          Length = 1602771

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 599     gctggatgtggtcgaagaag 618
               ||||||||||||||||||||
Sbjct: 1197569 gctggatgtggtcgaagaag 1197550
to top
>gb|AC156555.8| Mus musculus chromosome 7, clone RP23-59P20, complete sequence
          Length = 247652

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 104    atgaaacagagcaactaaat 123
              ||||||||||||||||||||
Sbjct: 126095 atgaaacagagcaactaaat 126076
to top
>gb|BC070890.1| Rattus norvegicus syndecan 2, mRNA (cDNA clone MGC:91773
            IMAGE:7098631), complete cds
          Length = 2974

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1033 catggaattgatttgaacatctatgtgc 1060
to top
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 597     ccgctggatgtggtcgaaga 616
               ||||||||||||||||||||
Sbjct: 1497061 ccgctggatgtggtcgaaga 1497042
to top
>gb|AE011928.1| Xanthomonas axonopodis pv. citri str. 306,  section 306 of 469 of the
            complete genome
          Length = 10541

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 597  ccgctggatgtggtcgaaga 616
            ||||||||||||||||||||
Sbjct: 4032 ccgctggatgtggtcgaaga 4051
to top
>gb|AC022887.10| Homo sapiens chromosome 8, clone RP11-480L14, complete sequence
          Length = 156238

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 264   tgttatgtatttcaacatag 283
             ||||||||||||||||||||
Sbjct: 20898 tgttatgtatttcaacatag 20917
to top
>emb|BX784026.17| Zebrafish DNA sequence from clone CH211-66P13 in linkage group 3,
              complete sequence
          Length = 162371

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     gtagtcttgttgtatttgtt 37
              ||||||||||||||||||||
Sbjct: 116160 gtagtcttgttgtatttgtt 116179
to top
>dbj|AK011042.1| Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched
            library, clone:2510038E19 product:syndecan 2, full insert
            sequence
          Length = 3169

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1235 catggaattgatttgaacatctatgtgc 1262
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 285     tgagcgcacatcctccatgaaagccaca 312
               ||||||||||||||| ||| ||||||||
Sbjct: 2652953 tgagcgcacatcctcgatggaagccaca 2652980
to top
>ref|NM_013082.2| Rattus norvegicus syndecan 2 (Sdc2), mRNA
          Length = 2974

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1033 catggaattgatttgaacatctatgtgc 1060
to top
>dbj|AP005582.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0006E02
          Length = 141782

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 285   tgagcgcacatcctccatgaaagccaca 312
             ||||||||||||||| ||| ||||||||
Sbjct: 98231 tgagcgcacatcctcgatggaagccaca 98258
to top
>ref|XM_316058.2| Anopheles gambiae str. PEST ENSANGP00000010743
           (ENSANGG00000008254), partial mRNA
          Length = 1211

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 645 gccgatctcgatctcgatct 664
           ||||||||||||||||||||
Sbjct: 465 gccgatctcgatctcgatct 446
to top
>dbj|AK108591.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-146-D03, full
           insert sequence
          Length = 2033

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 285 tgagcgcacatcctccatgaaagccaca 312
           ||||||||||||||| ||| ||||||||
Sbjct: 991 tgagcgcacatcctcgatggaagccaca 964
to top
>dbj|AK102074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082G22, full
            insert sequence
          Length = 4133

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 285  tgagcgcacatcctccatgaaagccaca 312
            ||||||||||||||| ||| ||||||||
Sbjct: 1108 tgagcgcacatcctcgatggaagccaca 1081
to top
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 597     ccgctggatgtggtcgaaga 616
               ||||||||||||||||||||
Sbjct: 1512575 ccgctggatgtggtcgaaga 1512556
to top
>dbj|AP001829.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-254C5, complete
             sequence
          Length = 117291

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 295   tcctccatgaaagccacagc 314
             ||||||||||||||||||||
Sbjct: 38287 tcctccatgaaagccacagc 38306
to top
>gb|AC132286.3| Mus musculus BAC clone RP24-299C19 from 1, complete sequence
          Length = 192877

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 176   catggcattgatttgaacaactat 199
             |||||||| |||||||||||||||
Sbjct: 59688 catggcatggatttgaacaactat 59665
to top
>dbj|AP007300.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT29K22, TM0275,
             complete sequence
          Length = 104570

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 25    tgttgtatttgttcgtggtacaag 48
             |||||||||||||||| |||||||
Sbjct: 15728 tgttgtatttgttcgtcgtacaag 15751
to top
>emb|X98522.1|BTFCGRIII B.taurus FcgammaRIII intron 4
          Length = 862

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 303 gaaagccacagcttcctcct 322
           ||||||||||||||||||||
Sbjct: 730 gaaagccacagcttcctcct 711
to top
>gb|M81687.1|RATHSPG Rat core protein (HSPG) mRNA, complete cds
          Length = 2153

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1243 catggaattgatttgaacatctatgtgc 1270
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>gb|U00674.1|U00674 Mus musculus NMRI fibroglycan (syndecan-2) gene, complete cds
          Length = 3311

 Score = 40.1 bits (20), Expect = 9.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 176  catggcattgatttgaacaactatgtgc 203
            ||||| ||||||||||||| ||||||||
Sbjct: 1386 catggaattgatttgaacatctatgtgc 1413


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,896,453
Number of Sequences: 3902068
Number of extensions: 4896453
Number of successful extensions: 92060
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 91656
Number of HSP's gapped (non-prelim): 397
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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