Clone Name | rbasd13b18 |
---|---|
Clone Library Name | barley_pub |
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 212 bits (107), Expect = 3e-52 Identities = 175/199 (87%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 793 cgaggttctcgagggggcccttgccggtgacgatggcctgcacgaagaagccgaacatgg 734 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| || Sbjct: 733 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcag 674 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| ||||| || ||||| |||||||| || || || || ||||| ||||||| Sbjct: 673 ggtcgtcggcaaggcccagggggtcgaagctgccgccggggtagagcgggtcgacgatct 614 Query: 181 cgccgagtgggccaccggc 199 ||||||| ||||| ||||| Sbjct: 613 cgccgagcgggccgccggc 595
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 204 bits (103), Expect = 8e-50 Identities = 168/191 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| ||| Sbjct: 711 gggcccttgccggtgacaatggcctgcacaaagaagccaaacatggagaacatggcgagg 652 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 ||||| |||||||||| || |||||||||||||| || |||| ||||| ||||| ||| Sbjct: 651 cggccattcttgatctccttaaccttgagctccgcaaatgcctcggggtcgtcggccagg 592 Query: 135 ccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggcca 194 || ||||||||||||||||| ||||| || |||||||| |||||||||||||| || ||| Sbjct: 591 ccaagtgggtcaaagctgccaccagggtagagtgggtcgacgatctcgccgagcggacca 532 Query: 195 ccggcaatgcg 205 || |||||||| Sbjct: 531 ccagcaatgcg 521
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 715 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 656 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 655 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 596 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 595 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 536 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 535 cgccgagcggcccgccggcgatgcg 511
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 23604258 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 23604199 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 23604198 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 23604139 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 23604138 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 23604079 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 23604078 cgccgagcggcccgccggcgatgcg 23604054 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 30025062 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 30025003 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 30025002 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 30024943 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 30024942 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 30024883 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 30024882 ccgagcgggccgccggc 30024866
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 66957 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 66898 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 66897 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 66838 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 66837 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 66778 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 66777 cgccgagcggcccgccggcgatgcg 66753
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 786 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 727 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 726 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 667 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 666 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 607 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 606 cgccgagcggcccgccggcgatgcg 582
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 785 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 726 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 725 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 666 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 665 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 606 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 605 cgccgagcggcccgccggcgatgcg 581
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 192 bits (97), Expect = 3e-46 Identities = 177/205 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 1609 cgaggttctcgagcgggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 1550 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||||| |||||||||||||||| || |||||||||||||| ||||| |||| | Sbjct: 1549 aaaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggcctcgg 1490 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| ||||| || || ||||| |||| || Sbjct: 1489 ggtcgtcggccaggccgagggggtcgaagctgccgccagggtacagcgggtcgacgacct 1430 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||||||||| Sbjct: 1429 cgccgagcggcccgccggcaatgcg 1405
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 192 bits (97), Expect = 3e-46 Identities = 174/201 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| ||||| |||||||| || || ||||||||||||||||| | Sbjct: 739 cgaggttctcaagtgggcccttgcccgtgacgatagcttggacaaagaagccaaacattg 680 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||| ||||||||||||| |||||||||||||| ||||| |||| || Sbjct: 679 agaacatggcaaggcgaccgttcttgatctccttcaccttgagctcggcgaatgcctcag 620 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||||||||| | ||| || ||||| ||||| || || || || |||||||||||||||| Sbjct: 619 ggtcttcggccaagccaagagggtcgaagctaccgcctgggtagagtgggtcaacgatct 560 Query: 181 cgccgagtgggccaccggcaa 201 | ||||||||||| ||||||| Sbjct: 559 caccgagtgggccgccggcaa 539
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 10793711 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 10793652 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 10793651 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 10793592 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 10793591 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 10793532 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 10793531 cgccgagcggcccgccggcgatgcg 10793507
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 17434 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 17375 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 17374 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 17315 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 17314 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 17255 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 17254 cgccgagcggcccgccggcgatgcg 17230
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 130329 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 130270 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 130269 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 130210 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 130209 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 130150 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 130149 cgccgagcggcccgccggcgatgcg 130125
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 779 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 720 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 719 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 660 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 659 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 600 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 599 cgccgagcggcccgccggcgatgcg 575
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 784 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 725 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 724 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 665 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 664 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 605 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 604 cgccgagcggcccgccggcgatgcg 580
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 786 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 727 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 726 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 667 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 666 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 607 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 606 cgccgagcggcccgccggcgatgcg 582
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 784 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 725 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 724 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 665 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 664 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 605 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 604 cgccgagcggcccgccggcgatgcg 580
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 184 bits (93), Expect = 7e-44 Identities = 176/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 784 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 725 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| | Sbjct: 724 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaacgcctcgg 665 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 664 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 605 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 604 cgccgagcggcccgccggcgatgcg 580
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 182 bits (92), Expect = 3e-43 Identities = 168/192 (87%), Gaps = 2/192 (1%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||||||||| |||||||| |||||||||||||||||||||||||||| ||| Sbjct: 916 gggcccttgccggtgacaatggcctgcacaaagaagccaaacatggagaacatggcgagg 857 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtc-ttcggctag 133 ||||| |||||||||| || |||||||||||||| || |||| ||||| ||||| || Sbjct: 856 cggccattcttgatctccttaaccttgagctccgcaaatgcctg-gggtcgctcggccag 798 Query: 134 gccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggcc 193 ||| ||||||||||||||||| ||||| || |||||||| |||||||||||||| || || Sbjct: 797 gccaagtgggtcaaagctgccaccagggtagagtgggtcgacgatctcgccgagcggacc 738 Query: 194 accggcaatgcg 205 ||| |||||||| Sbjct: 737 accagcaatgcg 726 Score = 58.0 bits (29), Expect = 1e-05 Identities = 59/67 (88%), Gaps = 2/67 (2%) Strand = Plus / Plus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| |||||||| |||| |||||||| |||||||||||||| |||||||| || Sbjct: 1108 ccggtgacaatggcctgcacaa-gaagccaa-catggagaacatggcgaggcggccatta 1165 Query: 84 ttgatct 90 ||||||| Sbjct: 1166 ttgatct 1172
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 180 bits (91), Expect = 1e-42 Identities = 162/187 (86%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 1176 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 1117 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||||||||||||||| |||||||||||||||||| |||||| | Sbjct: 1116 agaacatggcgaggcggccgttcttgatcttcttcaccttgagctccgcgcacgcctcgg 1057 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 1056 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtacagcgggtcgacgacct 997 Query: 181 cgccgag 187 ||||||| Sbjct: 996 cgccgag 990
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 178 bits (90), Expect = 4e-42 Identities = 173/202 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 1215 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 1156 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 1155 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 1096 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 1095 ggtcatcggcgaggccgagcgggtcgaaggcgccgcccgggtagagcgggtcgacgacct 1036 Query: 181 cgccgagtgggccaccggcaat 202 ||||||| || || |||||||| Sbjct: 1035 cgccgagcggcccgccggcaat 1014
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 725 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 666 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 665 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 606 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 605 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 546 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 545 ccgagcgggccgccggc 529
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Plus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 13949 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 14008 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 14009 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 14068 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 14069 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 14128 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 14129 ccgagcgggccgccggc 14145
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 21052 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 20993 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 20992 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 20933 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 20932 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 20873 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 20872 ccgagcgggccgccggc 20856
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 806 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 747 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 746 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 687 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 686 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 627 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 626 ccgagcgggccgccggc 610
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 806 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 747 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 746 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 687 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 686 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 627 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 626 ccgagcgggccgccggc 610
>dbj|AK061619.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-E02, full insert sequence Length = 650 Score = 176 bits (89), Expect = 2e-41 Identities = 175/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || ||| |||| ||| ||| Sbjct: 315 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagcagccgaacctgg 256 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||||||||| |||| | Sbjct: 255 agaacatggcgaggcggccgttcttgatctccttcaccttgagctccgcgaaggcctccg 196 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| |||||||| || || || || ||||| |||| || Sbjct: 195 ggtcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 136 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 135 cgccgagcggcccgccggcgatgcg 111
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 176 bits (89), Expect = 2e-41 Identities = 169/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 808 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 749 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 748 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 689 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| ||||| |||||||| || || || || ||||| |||| |||| Sbjct: 688 tcgtcggcgaggccgagcgggtcgaagctgccgccggggtagagcgggtcgacgacctcg 629 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 628 ccgagcgggccgccggc 612
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 176 bits (89), Expect = 2e-41 Identities = 175/205 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| |||||||||||||||||||| || |||||||| ||||||| Sbjct: 765 cgaggttctcgagggggcccttgccggtgacgatggcctggacgaagaagccgaacatgg 706 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||| |||||||||| ||||||||||||||||||||||||| | Sbjct: 705 agaacatggcgaggcggcctttcttgatctccttcaccttgagctccgcgaacgcctcgg 646 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| ||| ||| || || || || ||||| |||| || Sbjct: 645 ggtcatcggcgaggccgagcgggtcgaaggcgccgccggggtagagcgggtcgacgacct 586 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 585 cgccgagcggcccgccggcgatgcg 561
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 168 bits (85), Expect = 4e-39 Identities = 174/205 (84%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| || ||||||||||||||||| || ||||| || ||||||| Sbjct: 1739 cgaggttctcgagcgggcccttcccggtgacgatggcctggacgaagaatccgaacatgg 1680 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||| ||||||| || |||||||||||||| ||||| |||| | Sbjct: 1679 agaacatggcgaggcggcccttcttgagctccttcaccttgagctcagcgaaggcctcgg 1620 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| ||||| || ||||| |||||||| || ||||| || ||||| |||| || Sbjct: 1619 ggtcgtcggcgaggcccagcgggtcgaagctgccgccgggatagagcgggtcgacgacct 1560 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| ||||| ||||| ||||| Sbjct: 1559 cgccgagcgggccgccggcgatgcg 1535
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 168 bits (85), Expect = 4e-39 Identities = 168/197 (85%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || || || |||||||||||||||||||| || ||||| || ||||||||| Sbjct: 808 aggttctccagtggccccttgccggtgacgatggcctggacgaagaacccgaacatggag 749 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||||||||||||||||||| |||||||||||||| |||||||||| ||| Sbjct: 748 aacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaacgcctcgggg 689 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 || ||||| |||||||| | ||| |||||||| || || || || ||||| |||| |||| Sbjct: 688 tcgtcggcgaggccgagcgagtcgaagctgccgccggggtagagcgggtcgacgacctcg 629 Query: 183 ccgagtgggccaccggc 199 ||||| ||||| ||||| Sbjct: 628 ccgagcgggccgccggc 612
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 161 bits (81), Expect = 1e-36 Identities = 173/205 (84%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| || ||||||||||||||||| || ||||| || ||||||| Sbjct: 1739 cgaggttctcgagcgggcccttcccggtgacgatggcctggacgaagaatccgaacatgg 1680 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||| ||||||| || |||||||||||||| ||||| |||| | Sbjct: 1679 agaacatggcgaggcggcccttcttgagctccttcaccttgagctcagcgaaggcctcgg 1620 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| ||||| || ||||| |||||||| || ||||| || ||||| |||| || Sbjct: 1619 ggtcgtcggcgaggcccagcgggtcgaagctgccgccgggatagagcgggtcgacgacct 1560 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| || || ||||| ||||| Sbjct: 1559 cgccgagcggtccgccggcgatgcg 1535
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 157 bits (79), Expect = 2e-35 Identities = 168/199 (84%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| |||||||||||||||||||| || ||||| || ||||||| Sbjct: 739 cgaggttctcgagcgggcccttgccggtgacgatggcctggacgaagaacccgaacatgg 680 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||||||||||| || |||||||||| |||||||| |||| || Sbjct: 679 agaacatggcgaggcggccgttcttgagctccttcaccttgacgtccgcgaaggcctcag 620 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| |||||||| ||||| || |||| || || || || ||||| |||| || Sbjct: 619 ggtcgtcggcgaggccgagcgggtcgaacgtgccgccggggtagagcgggtcgacgacct 560 Query: 181 cgccgagtgggccaccggc 199 | ||||| ||||| ||||| Sbjct: 559 ctccgagcgggccgccggc 541
>emb|AJ234428.1|HVU234428 Hordeum vulgare partial mRNA; clone cMWG0701.rev Length = 326 Score = 153 bits (77), Expect = 3e-34 Identities = 169/201 (84%) Strand = Plus / Plus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| || || ||||||||||| || |||||| | |||||||||| Sbjct: 17 cgaggttctcgagcgggcccttaccagtgacgatggcttgcacaaagtatccaaacatgg 76 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||| | ||| || ||||||||||||| |||||||||||||| || ||||||| | Sbjct: 77 aaaacattgcaagacgaccgttcttgatctccttcaccttgagctcggcaaacgcctcgg 136 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| || || ||||| || ||||| |||||||| || || || |||||||| ||||||| Sbjct: 137 ggtcgtctgcaaggccaagggggtcgaagctgccaccggggtatagtgggtcgacgatct 196 Query: 181 cgccgagtgggccaccggcaa 201 | |||||||||||||| |||| Sbjct: 197 ctccgagtgggccaccagcaa 217
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 141 bits (71), Expect = 1e-30 Identities = 151/179 (84%) Strand = Plus / Minus Query: 21 ttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccg 80 |||||||||||||||||||| ||||| || || |||||||| ||||||| ||||||||| Sbjct: 749 ttgccggtgacgatggcctggacaaaaaacccgaacatggataacatggcgaggcggccg 690 Query: 81 ttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagt 140 |||||||||| |||||||||||||| |||||||||| ||||| ||||| |||||||| Sbjct: 689 ttcttgatctccttcaccttgagctcggcgaacgcctcggggtcgtcggcgaggccgagc 630 Query: 141 gggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggc 199 ||||| || ||||| || || || || ||||| || | ||| ||||| ||||| ||||| Sbjct: 629 gggtctaaactgccgccggggtagagcgggtcgacaacctccccgagcgggccgccggc 571
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 139 bits (70), Expect = 4e-30 Identities = 164/194 (84%), Gaps = 2/194 (1%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| || ||||| ||||||||||| |||||||| |||| ||||||||||| | Sbjct: 748 cgaggttctcaagagggcccttgccggtgactatggcctggacaagaaagccaaacatcg 689 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||||||||||||||| |||||||||||| | |||| | || | Sbjct: 688 agaacatggcaaggcggccgttcttgatctccttcaccttgagcgcgtcgaatg-cttgg 630 Query: 121 ggtc-ttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatc 179 |||| ||||| ||||| ||||||||||| || || || || || || ||||| |||||| Sbjct: 629 ggtcgctcggccaggccaagtgggtcaaaccttccacccgggtagagagggtcgacgatc 570 Query: 180 tcgccgagtgggcc 193 |||||||||||||| Sbjct: 569 tcgccgagtgggcc 556
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 137 bits (69), Expect = 1e-29 Identities = 170/205 (82%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| |||||||| || ||||||||||||||||| || ||||| || ||||||| Sbjct: 791 cgaggttctcgagcgggcccttcccggtgacgatggcctggacgaagaatccgaacatgg 732 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||||| |||||||| ||||||| || || ||||||||||| |||| |||| | Sbjct: 731 acaacatggcgaggcggcccttcttgagctccttgaccttgagctcgccgaaggcctcgg 672 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| ||||| || ||||| |||||||| || || || || ||||| |||| || Sbjct: 671 ggtcgtcggcgaggcccagcgggtcgaagctgccgccggggtagagcgggtcgacgacct 612 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||| ||||| ||||| ||||| Sbjct: 611 cgccgagcgggccgccggcgatgcg 587
>gb|AC135564.4| Oryza sativa chromosome 3 BAC OSJNBb0056O10 genomic sequence, complete sequence Length = 139771 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Plus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 79044 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 79103 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 79104 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 79163 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 79164 gtcgtcggcgaggccgagcgggtc 79187
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 21808772 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 21808713 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 21808712 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 21808653 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 21808652 gtcgtcggcgaggccgagcgggtc 21808629
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 21801801 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 21801742 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 21801741 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 21801682 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 21801681 gtcgtcggcgaggccgagcgggtc 21801658
>dbj|AK066762.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013075I09, full insert sequence Length = 1106 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 771 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 712 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 711 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 652 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 651 gtcgtcggcgaggccgagcgggtc 628
>dbj|AK058315.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-A06, full insert sequence Length = 685 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 346 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 287 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 286 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 227 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 226 gtcgtcggcgaggccgagcgggtc 203
>gb|AF061577.1|AF061577 Oryza sativa chlorophyll a/b binding protein (RCABP89) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 135 bits (68), Expect = 6e-29 Identities = 124/144 (86%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 760 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaagccgaacatgga 701 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 700 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 641 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 640 gtcgtcggcgaggccgagcgggtc 617
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 131 bits (66), Expect = 9e-28 Identities = 131/154 (85%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | ||||| |||||||||||||| ||||| || |||||||| ||||||| Sbjct: 2650 cgaggttctcgatggggcccttgccggtgacgatagcctgcacgaagaagccgaacatgg 2591 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| ||||||||||||||||||| |||||||||||||| |||||| || | Sbjct: 2590 agaacatggcgaggcggccgttcttgatctccttcaccttgagctcggcgaaccgctccg 2531 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcc 154 |||| ||| | || ||||| ||||| |||||||| Sbjct: 2530 ggtcgtcgccgagcccgagcgggtcgaagctgcc 2497
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 127 bits (64), Expect = 1e-26 Identities = 94/105 (89%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 756 gaggttctcgatggggcccttgccggtgacgatggcctgcacgaagaagccgaacatgga 697 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 696 gaacatggcaaggcggccgttcttgagctccttcaccttgagctc 652
>gb|AY112240.1| Zea mays CL187_6 mRNA sequence Length = 770 Score = 127 bits (64), Expect = 1e-26 Identities = 94/105 (89%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || |||||||| |||||||| Sbjct: 404 gaggttctcgatggggcccttgccggtgacgatggcctgcacgaagaagccgaacatgga 345 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 |||||||| ||||||||||||||||| || |||||||||||||| Sbjct: 344 gaacatggcaaggcggccgttcttgagctccttcaccttgagctc 300
>dbj|D00642.1|RICLHCP2 Oryza sativa (japonica cultivar-group) mRNA for type II light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 989 Score = 127 bits (64), Expect = 1e-26 Identities = 123/144 (85%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| |||||||||||||||||||| || ||||| || |||||||| Sbjct: 752 gaggttctcgatggggcccttgccggtgacgatggcctggacgaagaatccgaacatgga 693 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagg 121 |||||||| |||||||||||||||| || |||||||||||||| ||||| | | ||| Sbjct: 692 gaacatggcgaggcggccgttcttgagctccttcaccttgagctcggcgaaggtgtcagg 633 Query: 122 gtcttcggctaggccgagtgggtc 145 ||| ||||| |||||||| ||||| Sbjct: 632 gtcgtcggcgaggccgagcgggtc 609
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 125 bits (63), Expect = 6e-26 Identities = 164/199 (82%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| | |||||| || ||||||||||| ||||| || ||||| || ||||||||| Sbjct: 617 aggttctccaacgggccctttccggtgacgatagcctggacgaagaatccgaacatggag 558 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||| | ||||||||||| || || ||||||||||| || || |||| || Sbjct: 557 aacatggcaagcctgccgttcttgagctccttaaccttgagctcagcaaaggcctctgga 498 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 ||||| || ||||| | |||||| ||||||||||| || || ||||||||||| | ||| Sbjct: 497 tcttcagcaaggcccaatgggtcgaagctgcctcctgggtagagtgggtcaaccacctct 438 Query: 183 ccgagtgggccaccggcaa 201 || ||||| |||||||||| Sbjct: 437 ccaagtggcccaccggcaa 419
>dbj|AB012638.1| Nicotiana sylvestris Lhcb1*5, Lhcb1*6 genes for light harvesting chlorophyll a/b-binding protein, complete cds Length = 7299 Score = 123 bits (62), Expect = 2e-25 Identities = 133/158 (84%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| ||||||||||| ||||| |||||||| ||||||||||||||||||| ||| | | Sbjct: 5075 ccttttccggtgacgatagcctgaacaaagaatccaaacatggagaacatggcaagtctg 5016 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 || |||||||||| || ||||||||||| || || |||| ||| ||||| || ||||| Sbjct: 5015 ccattcttgatctcctttaccttgagctcagcaaaagcctcaggatcttcagcaaggccc 4956 Query: 138 agtgggtcaaagctgcctccaggataaagtgggtcaac 175 | ||| || |||||||| || || |||||||||||||| Sbjct: 4955 aatggatcgaagctgccaccggggtaaagtgggtcaac 4918 Score = 71.9 bits (36), Expect = 7e-10 Identities = 122/152 (80%) Strand = Plus / Plus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| || || || ||||| ||||||||||||||||| | ||| | || ||| Sbjct: 1964 ccggtgacgatagcttgaacgaagaaaccaaacatggagaacatagcaagtctaccattc 2023 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| ||||| |||| |||||||| || || || | ||| Sbjct: 2024 ttgatctcctttaccttgagctcagcgaaagcctctgggtcttcagcaagacccaatgga 2083 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 || || || || || || |||||||||||||| Sbjct: 2084 tcgaaactaccaccggggtaaagtgggtcaac 2115
>gb|AF079590.1|AF079590 Sorghum bicolor photosystem II type II chlorophyll a/b binding protein (CABII) mRNA, partial cds Length = 714 Score = 121 bits (61), Expect = 9e-25 Identities = 82/90 (91%) Strand = Plus / Minus Query: 21 ttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccg 80 |||||||||||||||||||| || ||||| ||||||||||||||||||| ||||||||| Sbjct: 487 ttgccggtgacgatggcctggacgaagaacccaaacatggagaacatggcgaggcggccg 428 Query: 81 ttcttgatcttnttcaccttgagctccgcg 110 ||||||| || |||||||||||||||||| Sbjct: 427 ttcttgagctccttcaccttgagctccgcg 398
>gb|L23107.1|GBICABBP Ginkgo biloba nuclear-encoded chloroplast chlorophyll a/b binding protein mRNA, complete cds Length = 997 Score = 121 bits (61), Expect = 9e-25 Identities = 168/205 (81%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | |||||||||||||||||||||||||| || ||||| || ||||||| Sbjct: 800 cgaggttctcgatggggcctttgccggtgacgatggcctggacgaagaaaccgaacatgg 741 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 ||||||||| |||||||||||||||| || || ||||| || || ||||| || | | Sbjct: 740 agaacatggccaggcggccgttcttgagctccttaaccttcagttcggcgaaggcatcgg 681 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatct 180 |||| ||||| ||||| | ||||| |||||||| || ||||| | ||||| |||| Sbjct: 680 ggtcgtcggccaggcccaaggggtcgaagctgccacctggatagatggggtcggtaatct 621 Query: 181 cgccgagtgggccaccggcaatgcg 205 ||||||||||||| || |||||||| Sbjct: 620 cgccgagtgggccgccagcaatgcg 596
>gb|M30620.1|TOMCBPE2 Tomato chlorophyll a/b-binding protein Cab-3A gene, 3' end Length = 351 Score = 119 bits (60), Expect = 3e-24 Identities = 128/152 (84%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| || || || |||||||| ||||||||||||||||| | ||| | ||||||| Sbjct: 257 ccggtgacaatagcttgaacaaagaatccaaacatggagaacatagcaagtctgccgttc 198 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| ||||| |||| |||||||| || ||||| | |||| Sbjct: 197 ttgatctcctttaccttgagctcagcgaaagcctctgggtcttcagcaaggcccaatggg 138 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 |||||||| || ||||| |||||||| ||||| Sbjct: 137 tcaaagctaccaccagggtaaagtggatcaac 106
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 119 bits (60), Expect = 3e-24 Identities = 149/180 (82%) Strand = Plus / Minus Query: 5 gttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaa 64 |||||| || ||||| || ||||||||||||||||| || ||||| || ||||||||||| Sbjct: 1120 gttctcgagggggcccttcccggtgacgatggcctgcacgaagaacccgaacatggagaa 1061 Query: 65 catggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtc 124 ||||| ||||| ||||||||||||| |||||||| |||||||| || |||| ||||| Sbjct: 1060 catggccaggcgtccgttcttgatctccttcaccttcagctccgcaaaggcctcggggtc 1001 Query: 125 ttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgcc 184 ||||| || || || ||||| |||||||| || || || || ||||| |||| |||||| Sbjct: 1000 gtcggccagccccagcgggtcgaagctgccgccggggtacagcgggtcgacgacctcgcc 941
>gb|M12152.1|LGIAB19A Lemna gibba chlorophyll a/b apoprotein gene, complete cds Length = 1913 Score = 119 bits (60), Expect = 3e-24 Identities = 101/116 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| || Sbjct: 1449 gggcccttgccggtgacgatggcctgaacgaagaagccgaacatggagaacatggccagc 1390 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggc 130 || ||||||||||||| |||||||| ||||||||||| |||| ||||| ||||| Sbjct: 1389 cgcccgttcttgatctccttcaccttcagctccgcgaaggcctcggggtcgtcggc 1334
>ref|XM_478729.1| Oryza sativa (japonica cultivar-group), mRNA Length = 972 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 750 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 691 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 690 cggccattcttgatctccttgaccttgagctcggcgaa 653
>ref|XM_507374.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 995 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 774 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 715 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 714 cggccattcttgatctccttgaccttgagctcggcgaa 677
>ref|XM_507373.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1007 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 774 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 715 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 714 cggccattcttgatctccttgaccttgagctcggcgaa 677
>ref|XM_507372.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1108 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 776 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 717 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 716 cggccattcttgatctccttgaccttgagctcggcgaa 679
>ref|XM_507371.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1000 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>ref|XM_507370.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1012 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>ref|XM_507369.1| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1032 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 781 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 722 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 721 cggccattcttgatctccttgaccttgagctcggcgaa 684
>ref|XM_506410.2| PREDICTED Oryza sativa (japonica cultivar-group), P0406F06.33 mRNA Length = 1159 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 814 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 755 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 754 cggccattcttgatctccttgaccttgagctcggcgaa 717
>gb|AY171229.1| Chlamydomonas reinhardtii light-harvesting complex II protein (Lhcb) mRNA, complete cds; nuclear gene for chloroplast product Length = 1024 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 709 gggcccttgccggtcacgatggcctgaacgaagaagccgaacatggagaacatggccagg 650 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 649 cggccgttcttgatctccttcaccttcagctcagcgaa 612
>gb|AF104631.3| Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb3) mRNA, complete cds Length = 1314 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 761 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 702 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 701 cggccgttcttgatctccttcaccttcagctcagcgaa 664
>gb|AF495473.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m1 gene, complete cds; nuclear gene for chloroplast product Length = 1934 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 1417 gggcccttgccggtcacgatggcctgaacgaagaagccgaacatggagaacatggccagg 1358 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 1357 cggccgttcttgatctccttcaccttcagctcagcgaa 1320
>gb|AF479779.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m7 (Lhcbm7) mRNA, complete cds Length = 1016 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 706 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 647 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 646 cggccgttcttgatctccttcaccttcagctcagcgaa 609
>gb|AF479777.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m10 (Lhcbm10) mRNA, complete cds Length = 1077 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 707 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 648 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 647 cggccgttcttgatctccttcaccttcagctcagcgaa 610
>gb|DQ122900.1| Chlamydomonas incerta chloroplast light-harvesting chlorophyll-a/b binding protein (LhcII-1.3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1100 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 701 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 642 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 641 cggccgttcttgatctccttcaccttcagctcagcgaa 604
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 22434787 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 22434728 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 22434727 cggccattcttgatctccttgaccttgagctcggcgaa 22434690
>dbj|AP004270.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0406F06 Length = 144533 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 95854 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 95795 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 95794 cggccattcttgatctccttgaccttgagctcggcgaa 95757
>dbj|AK119545.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-G05, full insert sequence Length = 1012 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>dbj|AK119533.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-F03, full insert sequence Length = 1000 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>dbj|AK104495.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-302-C03, full insert sequence Length = 973 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 750 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 691 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 690 cggccattcttgatctccttgaccttgagctcggcgaa 653
>dbj|AK104465.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C07, full insert sequence Length = 1012 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>dbj|AK104224.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-E11, full insert sequence Length = 995 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 774 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 715 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 714 cggccattcttgatctccttgaccttgagctcggcgaa 677
>dbj|AK103999.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-019-D10, full insert sequence Length = 1007 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 774 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 715 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 714 cggccattcttgatctccttgaccttgagctcggcgaa 677
>dbj|AK103926.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-D02, full insert sequence Length = 1000 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>dbj|AK061512.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G12, full insert sequence Length = 1032 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 781 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 722 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 721 cggccattcttgatctccttgaccttgagctcggcgaa 684
>dbj|AK058312.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H12, full insert sequence Length = 1040 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 719 cggccattcttgatctccttgaccttgagctcggcgaa 682
>gb|M30622.1|TOMCBPF2 Tomato chlorophyll a/b-binding protein Cab-3B gene, 3' end Length = 351 Score = 113 bits (57), Expect = 2e-22 Identities = 114/134 (85%) Strand = Plus / Minus Query: 42 acaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttcaccttg 101 |||||||||||||||||||||||||| | ||| | |||||||||||||| ||||| ||| Sbjct: 239 acaaagaagccaaacatggagaacatagcaagtctgccgttcttgatctccttcactttg 180 Query: 102 agctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcctccagga 161 ||||| || || |||| |||||||| || ||||| | |||||||||||| || ||||| Sbjct: 179 agctcagcaaaagcctctgggtcttcagcaaggcccaatgggtcaaagctaccaccaggg 120 Query: 162 taaagtgggtcaac 175 |||||||| ||||| Sbjct: 119 taaagtggatcaac 106
>dbj|AB051210.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 988 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 693 gggcccttgccggtcacgatggcctgaacgaagaagccgaacatggagaacatggccagg 634 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 633 cggccgttcttgatctccttcaccttcagctcagcgaa 596
>dbj|AB051208.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1107 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 735 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 676 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 675 cggccgttcttgatctccttcaccttcagctcagcgaa 638
>dbj|AB051206.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-4, complete cds Length = 1781 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 1330 gggcccttgccggtcacgatggcctgaacgaagaagccgaacatggagaacatggccagg 1271 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 1270 cggccgttcttgatctccttcaccttcagctcagcgaa 1233
>dbj|AB051204.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-1.3, complete cds Length = 1835 Score = 113 bits (57), Expect = 2e-22 Identities = 87/98 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 1577 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccagg 1518 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 1517 cggccgttcttgatctccttcaccttcagctcagcgaa 1480
>gb|M21397.1|TOBCABA Tobacco chlorophyll a/b-binding protein (Cab-C) gene, complete cds Length = 1240 Score = 111 bits (56), Expect = 9e-22 Identities = 127/152 (83%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| || ||||| ||||||||||||||||||| ||| | ||||||| Sbjct: 1146 ccggtgacgatagcctgaacgaagaatccaaacatggagaacatggcaagtctgccgttc 1087 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || || | |||||||| || || || | |||| Sbjct: 1086 ttgatctcctttaccttgagctcagcaaaagcttctgggtcttcagcaagacccaatggg 1027 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 || ||||| || ||||| |||||||||||||| Sbjct: 1026 tcgaagctaccaccagggtaaagtgggtcaac 995
>dbj|AK109399.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C08, full insert sequence Length = 1111 Score = 107 bits (54), Expect = 1e-20 Identities = 81/91 (89%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 779 gggcccttgccggtgacgatggcctggacgaagaagccgaacatggagaacatggcgagg 720 Query: 75 cggccgttcttgatcttnttcaccttgagct 105 ||||| |||||||||| || |||||||||| Sbjct: 719 cggccattcttgatctccttgaccttgagct 689
>emb|X52741.1|NTCAB16 Tabacco Cab16 mRNA for major chlorophyll a/b binding protein Length = 1025 Score = 107 bits (54), Expect = 1e-20 Identities = 146/178 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| |||||||| ||||||||||||||||| | ||| | || ||| Sbjct: 765 ccggtgacgatagcctgaacaaagaatccaaacatggagaacatagcaagtctaccattc 706 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||| | || ||||||||||| ||||| |||| || ||||| || ||||| | |||| Sbjct: 705 ttgatttcctttaccttgagctcagcgaaagcctctggatcttcagcaaggcccaatggg 646 Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaa 201 || |||||||| || || |||||||||||||| | ||| ||||| || ||||| |||| Sbjct: 645 tcgaagctgccaccggggtaaagtgggtcaacaacctcaccgagaggtccaccagcaa 588
>gb|AF330793.1|AF330793 Chlamydomonas reinhardtii light-harvesting complex II protein precursor (cabII-2) mRNA, complete cds Length = 1068 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||| | ||| Sbjct: 689 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatagccagg 630 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 629 cggccgttcttgatctccttcaccttcagctcagcgaa 592
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| || ||||||||||| |||| Sbjct: 718 gggcccttgccggtcacgatggcctgcacgaagaagccgaagcaggagaacatggcaagg 659 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||||||||| ||||| Sbjct: 658 cggccgttcttgatctccttcaccttgagctcagcgaa 621
>dbj|AK068972.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023001G03, full insert sequence Length = 1107 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||| ||| || |||||||| |||||||||||||||| ||| Sbjct: 775 gggcccttgccggtgacgatggtctggacgaagaagccgaacatggagaacatggcgagg 716 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||| |||||||||| || ||||||||||| ||||| Sbjct: 715 cggccattcttgatctccttgaccttgagctcggcgaa 678
>gb|AF022739.1|AF022739 Oryza sativa chlorophyll a-b binding protein mRNA, complete cds Length = 1100 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || ||||| || |||||||||||||||| ||| Sbjct: 754 gggcccttgccggtgacgatggcctggacgaagaaacccaacatggagaacatggcgagg 695 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||| |||| || |||||||||| ||||||||| Sbjct: 694 cggccgttattgaactccttcaccttgaactccgcgaa 657
>dbj|AB051209.1| Chlamydomonas reinhardtii mRNA for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1256 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||| | ||| Sbjct: 705 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatagccagg 646 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 645 cggccgttcttgatctccttcaccttcagctcagcgaa 608
>dbj|AB051205.1| Chlamydomonas reinhardtii gene for light-harvesting chlorophyll-a/b binding protein LhcII-3, complete cds Length = 1508 Score = 105 bits (53), Expect = 5e-20 Identities = 86/98 (87%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||| | ||| Sbjct: 1386 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatagccagg 1327 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 1326 cggccgttcttgatctccttcaccttcagctcagcgaa 1289
>emb|AJ538464.1|NTA538464 Nicotiana tabacum cDNA-AFLP-fragment BC2-M14-017 Length = 330 Score = 103 bits (52), Expect = 2e-19 Identities = 126/152 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| || ||||| ||||||||||||||||||| ||| | ||||||| Sbjct: 283 ccggtgacgatagcctgaacgaagaatccaaacatggagaacatggcaagtctgccgttc 224 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || || | ||||| || || || || | |||| Sbjct: 223 ttgatctcctttaccttgagctcagcaaaagcttctgggtcatcagcaagacccaatggg 164 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 |||||||| || ||||| || ||||||||||| Sbjct: 163 tcaaagctaccaccagggtagagtgggtcaac 132
>gb|M14444.1|TOMCBPB Tomato chlorophyll a/b-binding protein gene Cab-3C, complete cds Length = 1135 Score = 103 bits (52), Expect = 2e-19 Identities = 126/152 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| || || ||||||||||| |||||||||||||| | ||| | || ||| Sbjct: 912 ccggtgacgatagcttgaacaaagaagccgaacatggagaacatagcaagtctaccattc 853 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 || |||| |||||||||||||| ||||| |||| ||||| || || |||| |||||| Sbjct: 852 ttaatctctttcaccttgagctcagcgaaagcctctgggtcatcagcagggcccagtggg 793 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 |||||||| || ||||| || ||||||||||| Sbjct: 792 tcaaagctaccaccagggtagagtgggtcaac 761
>dbj|AB012637.1| Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 genes for light harvesting chlorophyll a/b-binding protein, complete cds Length = 7965 Score = 103 bits (52), Expect = 2e-19 Identities = 117/140 (83%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| || ||||| |||||||||| ||| | ||| |||||||||| Sbjct: 2576 atggcctgaacaaagaatccgaacatagagaacatggcaagcctgccattcttgatctcc 2517 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 || || |||||||| ||||| |||| ||||| || || ||||| ||||||||||||||| Sbjct: 2516 tttactttgagctcagcgaatgcctctgggtcctcagcaaggcctagtgggtcaaagctg 2457 Query: 153 cctccaggataaagtgggtc 172 || ||||| || |||||||| Sbjct: 2456 ccaccagggtagagtgggtc 2437 Score = 83.8 bits (42), Expect = 2e-13 Identities = 137/170 (80%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||||| || || || || ||||| || |||||||| || ||||| ||| Sbjct: 7599 aggttctctaatgggccctttccagtaacaatggcttgaacaaagaatccgaacatagag 7540 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| || | |||||||| |||| || ||||||||||| ||||| |||| || Sbjct: 7539 aacatggcgagtcttccgttcttaatctcttttaccttgagctcggcgaatgcctctgga 7480 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtc 172 || || || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 7479 tcctcagcaaggcccagtgggtcaaagctgccaccagggtagagtgggtc 7430 Score = 67.9 bits (34), Expect = 1e-08 Identities = 126/158 (79%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| || |||||||| |||||||| || ||||| |||||||||| ||| Sbjct: 5047 gggccctttccggtaacaatggcctgaacaaagaatccgaacatagagaacatggcaagt 4988 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 | || |||||||||| || || |||||||| || || |||| ||||| || || || Sbjct: 4987 ctcccattcttgatctcctttactttgagctcagcaaatgcctctgggtcatcagcaagc 4928 Query: 135 ccgagtgggtcaaagctgcctccaggataaagtgggtc 172 || | |||||||||||| || ||||| || |||||||| Sbjct: 4927 cccaatgggtcaaagctaccaccagggtagagtgggtc 4890
>emb|AJ538840.1|NTA538840 Nicotiana tabacum cDNA-AFLP-fragment BT2-M11-016 Length = 315 Score = 101 bits (51), Expect = 8e-19 Identities = 143/175 (81%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 |||||||| ||||| |||||||| ||||||||||||||||| | ||| | || |||||| Sbjct: 265 gtgacgatagcctgaacaaagaatccaaacatggagaacatagcaagtctaccattcttg 206 Query: 87 atcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtca 146 |||| || ||||||||||| || || |||| |||||||| || || || | |||||| Sbjct: 205 atctcctttaccttgagctcagcaaaagcctctgggtcttcagcaagtcccaatgggtcg 146 Query: 147 aagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaa 201 || ||||| ||||| |||||||||||||| | |||||||| || ||||| |||| Sbjct: 145 aaactgccaccagggtaaagtgggtcaacaacttcgccgagaggtccaccagcaa 91
>emb|X02360.1|PECAB22R Petunia gene for chlorophyll a/b binding protein cab 22R Length = 1187 Score = 101 bits (51), Expect = 8e-19 Identities = 125/151 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| |||||||| |||||||| |||||||| | ||| | || ||| Sbjct: 940 ccggtgacgatagcctgcacaaagaatccaaacatagagaacatagcaagtctaccattc 881 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 || |||| |||||||||||||| || || || | |||||||| |||||||| | ||| Sbjct: 880 ttaatctccttcaccttgagctcagcaaaagcttcggggtcttcagctaggcccaatgga 821 Query: 144 tcaaagctgcctccaggataaagtgggtcaa 174 || ||||| || ||||||||||||||||||| Sbjct: 820 tcgaagctaccaccaggataaagtgggtcaa 790
>gb|K00972.1|PETCAB146 Petunia major chlorophyll a/b binding protein (Cab) clone pCab146, 3' end and flank Length = 498 Score = 101 bits (51), Expect = 8e-19 Identities = 125/151 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| |||||||| |||||||| |||||||| | ||| | || ||| Sbjct: 284 ccggtgacgatagcctgcacaaagaatccaaacatagagaacatagcaagtctaccattc 225 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 || |||| |||||||||||||| || || || | |||||||| |||||||| | ||| Sbjct: 224 ttaatctccttcaccttgagctcagcaaaagcttcggggtcttcagctaggcccaatgga 165 Query: 144 tcaaagctgcctccaggataaagtgggtcaa 174 || ||||| || ||||||||||||||||||| Sbjct: 164 tcgaagctaccaccaggataaagtgggtcaa 134
>emb|X14506.1|PSCABIIB Pinus sylvestris cab II/1B mRNA for chlorophyll a/b-binding protein Length = 1006 Score = 99.6 bits (50), Expect = 3e-18 Identities = 127/154 (82%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| |||||||| |||||||| || ||||| || ||||||| Sbjct: 802 cgaggttctcgatgggtcctttcccggtgacaatggcctgcacgaagaatccgaacatgg 743 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||||| | || ||||||||||||| |||||||| ||||||||||| |||| || Sbjct: 742 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaaagcctcag 683 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcc 154 ||||||| || || || || ||||| |||||||| Sbjct: 682 ggtcttccgcaagtcccagcgggtcgaagctgcc 649
>emb|AJ538931.1|NTA538931 Nicotiana tabacum cDNA-AFLP-fragment BT21-M1-005 Length = 332 Score = 97.6 bits (49), Expect = 1e-17 Identities = 123/149 (82%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 |||||||| ||||| |||||||| ||||||||||||||||| | ||| | || |||||| Sbjct: 282 gtgacgatagcctgaacaaagaatccaaacatggagaacatagcaagtctaccattcttg 223 Query: 87 atcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtca 146 |||| || ||||||||||| || || |||| |||||||| || || || | |||||| Sbjct: 222 atctcctttaccttgagctcagcaaaagcctctgggtcttcagcaagacccaatgggtcg 163 Query: 147 aagctgcctccaggataaagtgggtcaac 175 || ||||| ||||| |||||||||||||| Sbjct: 162 aaactgccaccagggtaaagtgggtcaac 134
>emb|AJ538874.1|NTA538874 Nicotiana tabacum cDNA-AFLP-fragment BT2-M23-004 Length = 311 Score = 97.6 bits (49), Expect = 1e-17 Identities = 123/149 (82%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 |||||||| ||||| |||||||| ||||||||||||||||| | ||| | || |||||| Sbjct: 261 gtgacgatagcctgaacaaagaatccaaacatggagaacatagcaagtctaccattcttg 202 Query: 87 atcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtca 146 |||| || ||||||||||| || || |||| |||||||| || || || | |||||| Sbjct: 201 atctcctttaccttgagctcagcaaaagcctgtgggtcttcagcaagtcccaatgggtcg 142 Query: 147 aagctgcctccaggataaagtgggtcaac 175 || ||||| ||||| |||||||||||||| Sbjct: 141 aaactgccaccagggtaaagtgggtcaac 113
>gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-1) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 97.6 bits (49), Expect = 1e-17 Identities = 123/149 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || |||||||| || ||||| |||||||| |||||||| | ||| | ||||||| Sbjct: 704 ccggtaacaatggcctgaacgaagaatccaaacatagagaacatagcaagtctgccgttc 645 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 || |||| || ||||||||||| || || |||| |||||||| || ||||| | |||| Sbjct: 644 ttaatctcctttaccttgagctcagcaaatgcctccgggtcttcagcaaggcctaatggg 585 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 ||||||||||| ||||| || |||||||| Sbjct: 584 tcaaagctgccaccagggtagagtgggtc 556
>emb|X52743.1|NTCAB21 Tabacco Cab21 mRNA for major chlorophyll a/b binding protein Length = 953 Score = 95.6 bits (48), Expect = 5e-17 Identities = 116/140 (82%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| || ||||| |||||||||| ||| | |||||||| |||| Sbjct: 757 atggcctgaacaaagaatccgaacatagagaacatggcaagtcttccgttcttaatctcc 698 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 || ||||||||||| || || |||| ||||| || || ||||| ||||||||||||||| Sbjct: 697 tttaccttgagctcagcaaatgcctctgggtcctcagcgaggcccagtgggtcaaagctg 638 Query: 153 cctccaggataaagtgggtc 172 || ||||| || |||||||| Sbjct: 637 ccaccagggtagagtgggtc 618
>gb|M21398.1|TOBCABB Tobacco chlorophyll a/b-binding protein (Cab-E) gene, complete cds Length = 1815 Score = 95.6 bits (48), Expect = 5e-17 Identities = 125/152 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||||| ||||| |||||||| ||||||||||||||||| | ||| | || ||| Sbjct: 1685 ccggtgacgagagcctgaacaaagaatccaaacatggagaacatagcaagtctaccattc 1626 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||| | || ||||||||||| ||||| |||| || ||||| || ||||| | |||| Sbjct: 1625 ttgatttcctttaccttgagctcagcgaaagcctctggatcttcagcaaggcccaatggg 1566 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 || |||||||| || || |||||||||||||| Sbjct: 1565 tcgaagctgccaccggggtaaagtgggtcaac 1534
>emb|X63197.1|HVLHBC H.vulgare lhbC mRNA for type III LHCII CAB precursor protein Length = 928 Score = 93.7 bits (47), Expect = 2e-16 Identities = 109/131 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||| || || || ||||| || ||||| |||||||||| ||| Sbjct: 752 gggcccttgccggtgacgatagcttgcacgaagaacccgaacatagagaacatggcaaga 693 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 ||||| |||||||||| |||||||| ||||||||||| | |||||| ||||| ||| Sbjct: 692 cggccattcttgatctccttcaccttaagctccgcgaaggtaacagggtcgtcggcaagg 633 Query: 135 ccgagtgggtc 145 ||||| ||||| Sbjct: 632 ccgagcgggtc 622
>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b- binding protein ( LHCP ) Length = 1030 Score = 93.7 bits (47), Expect = 2e-16 Identities = 109/131 (83%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||||||||||| ||||| |||||| Sbjct: 881 ccggtgacgatggcctgcacgaagaatccgaacatggagaacatggccaggcgtccgttc 822 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||| ||||| ||||| || | | ||| || || || ||||| ||| Sbjct: 821 ttgatctccttgaccttcagctcggcgaaggcttccgcgtcgtccgcgagcccgaggggg 762 Query: 144 tcaaagctgcc 154 ||||||||||| Sbjct: 761 tcaaagctgcc 751
>gb|AF017998.1|AF017998 Tetraselmis sp. RG-15 chlorophyll a/b binding protein (LHCPII) gene, complete cds Length = 2095 Score = 93.7 bits (47), Expect = 2e-16 Identities = 80/92 (86%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||||||||| |||||||| || ||||| ||||||||||||||||| | || Sbjct: 1661 gggcccttgccggtgacaatggcctgcacgaagaacccaaacatggagaacatagcgaga 1602 Query: 75 cggccgttcttgatcttnttcaccttgagctc 106 || ||||||||||||| |||||||||||||| Sbjct: 1601 cgcccgttcttgatctccttcaccttgagctc 1570
>gb|U51632.1|PPU51632 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 873 Score = 93.7 bits (47), Expect = 2e-16 Identities = 109/131 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| ||||| ||||| || |||||||| |||||||||||||||| || Sbjct: 656 gggcccttcccggtcacgattgcctgcacgaagaagccgaacatggagaacatggccagc 597 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 || |||||||| |||| |||||||| ||||||||||| |||| ||||| ||||| || Sbjct: 596 cgcccgttctttatctccttcacctttagctccgcgaaagcctccgggtcgtcggccagt 537 Query: 135 ccgagtgggtc 145 || |||||||| Sbjct: 536 cccagtgggtc 526
>gb|DQ018376.1| Pinus krempfii chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 752 Score = 91.7 bits (46), Expect = 8e-16 Identities = 82/95 (86%) Strand = Plus / Minus Query: 21 ttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccg 80 |||||||||||||||||||| || ||||| || |||||||| ||||||| | ||| ||| Sbjct: 724 ttgccggtgacgatggcctgcacgaagaatccgaacatggaaaacatggccaagcgcccg 665 Query: 81 ttcttgatcttnttcaccttgagctccgcgaacgc 115 ||||||| || |||||||| |||||||||||||| Sbjct: 664 ttcttgagctccttcaccttcagctccgcgaacgc 630
>gb|AF104630.1|AF104630 Chlamydomonas reinhardtii light harvesting complex II protein precursor (Lhcb2) mRNA, complete cds Length = 1200 Score = 91.7 bits (46), Expect = 8e-16 Identities = 87/99 (87%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatgg-naag 73 ||||| |||||||| ||||||||||| || |||||||| |||||||||||||||| ||| Sbjct: 713 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacatggccaag 654 Query: 74 gcggccgttcttgatcttnttcaccttgagctccgcgaa 112 || |||||||||||||| |||||||| ||||| ||||| Sbjct: 653 gc-gccgttcttgatctccttcaccttcagctcagcgaa 616
>gb|M30616.1|TOMCBPC2 Tomato chlorophyll a/b-binding protein Cab-1A gene , 3' end Length = 351 Score = 91.7 bits (46), Expect = 8e-16 Identities = 147/182 (80%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || |||||||| |||||||| |||||||| |||||||| | ||| | ||||||| Sbjct: 257 ccggtaacaatggcctgaacaaagaacccaaacatagagaacatagcaagtctgccgttc 198 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||| ||||| || || |||| |||||||| || ||||| | |||| Sbjct: 197 ttgatctccttaaccttaagctcagcaaatgcctccgggtcttcagcaaggcctaatggg 138 Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaatg 203 || |||||||| || || || |||||||| || | ||| || || || ||||| |||||| Sbjct: 137 tcgaagctgccaccggggtagagtgggtcgacaacctcaccaagaggtccaccagcaatg 78 Query: 204 cg 205 || Sbjct: 77 cg 76
>dbj|AB012636.1| Nicotiana sylvestris Lhcb1*1 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3659 Score = 91.7 bits (46), Expect = 8e-16 Identities = 138/170 (81%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||||| || ||||| || ||||| || |||||||| || ||||| ||| Sbjct: 861 aggttctctaatgggccctttccggtaacaatggcttgaacaaagaatccgaacatagag 802 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| || | |||||||| |||| || ||||||||||| ||||| |||| || Sbjct: 801 aacatggcgagtcttccgttcttaatctcttttaccttgagctcggcgaatgcctctgga 742 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtc 172 || || || ||||| ||||||||||||||||| ||||| || |||||||| Sbjct: 741 tcctcagcaaggcccagtgggtcaaagctgccaccagggtagagtgggtc 692
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence Length = 958 Score = 89.7 bits (45), Expect = 3e-15 Identities = 122/149 (81%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| || || || |||||||| |||||||| |||||||| | ||| | |||||| Sbjct: 748 ccggtgacaatagcttgaacaaagaatccaaacatagagaacatagcaagtctaccgttc 689 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || |||| |||||||| || ||||| | |||| Sbjct: 688 ttgatctcctttaccttgagctcagcaaatgcctctgggtcttcagcaaggcctaatggg 629 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 || |||||||| ||||| || |||||||| Sbjct: 628 tcgaagctgccaccagggtagagtgggtc 600
>gb|AF495472.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m6 mRNA, complete cds; nuclear gene for chloroplast product Length = 1094 Score = 89.7 bits (45), Expect = 3e-15 Identities = 84/98 (85%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||| | ||| Sbjct: 716 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacgatgccagg 657 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 656 cggccgttcttgatctccttcaccttcagctcagcgaa 619
>emb|X52744.1|NTCAB40 Tabacco Cab40 mRNA for major chlorophyll a/b binding protein Length = 1080 Score = 89.7 bits (45), Expect = 3e-15 Identities = 122/149 (81%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 |||||||| ||||| |||||||| ||||||||||| ||||| | ||| | || |||||| Sbjct: 770 gtgacgatagcctgaacaaagaatccaaacatggaaaacatagcaagtctaccattcttg 711 Query: 87 atcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtca 146 |||| || ||||||||||| || || |||| |||||||| || || || | |||||| Sbjct: 710 atctcctttaccttgagctcagcaaaagcctctgggtcttcagcaagtcccaatgggtcg 651 Query: 147 aagctgcctccaggataaagtgggtcaac 175 || ||||| ||||| |||||||||||||| Sbjct: 650 aaactgccaccagggtaaagtgggtcaac 622
>emb|X81810.1|PALHCB122 P.abies (L.)Karst. Lhcb1*2-2 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1050 Score = 89.7 bits (45), Expect = 3e-15 Identities = 149/185 (80%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| ||||||||||||||||| || ||||| || ||||| || ||||||| | || Sbjct: 764 cctttaccggtgacgatggcctggacgaagaatccgaacatagaaaacatggccaaccgc 705 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 |||||||||| || |||||||| ||||||||||| || | ||||| || || |||||| Sbjct: 704 ccgttcttgagctccttcaccttcagctccgcgaaagcgtccgggtcgtcagcaaggccg 645 Query: 138 agtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccg 197 || ||||| |||||||| || || || | |||||| |||||| ||||| |||||||| Sbjct: 644 agcgggtcgaagctgcccccggggtagatggggtcagtgatctctccgagagggccacct 585 Query: 198 gcaat 202 ||||| Sbjct: 584 gcaat 580
>emb|X81809.1|PALHCB12 P.abies (L.)Karst. Lhcb1*2-1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1062 Score = 89.7 bits (45), Expect = 3e-15 Identities = 149/185 (80%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| ||||||||||||||||| || ||||| || ||||| || ||||||| | || Sbjct: 761 cctttaccggtgacgatggcctggacgaagaatccgaacatagaaaacatggccaaccgc 702 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 |||||||||| || |||||||| ||||||||||| || | ||||| || || |||||| Sbjct: 701 ccgttcttgagctccttcaccttcagctccgcgaaagcgtccgggtcgtcagcaaggccg 642 Query: 138 agtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccg 197 || ||||| |||||||| || || || | |||||| |||||| ||||| |||||||| Sbjct: 641 agcgggtcgaagctgcccccggggtagatggggtcagtgatctctccgagagggccacct 582 Query: 198 gcaat 202 ||||| Sbjct: 581 gcaat 577
>emb|AJ318069.1|STU318069 Solanum tuberosum mRNA for ferredoxin-thioredoxin-reductase catalytic subunit B (ftrbpot gene) Length = 701 Score = 89.7 bits (45), Expect = 3e-15 Identities = 122/149 (81%) Strand = Plus / Plus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || |||||||| || ||||| |||||||| |||||||| | ||| | ||||||| Sbjct: 92 ccggtaacaatggcctgaacgaagaatccaaacatagagaacatagcaagtctgccgttc 151 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 || |||| || || |||||||| || || |||| |||||||| || ||||| | |||| Sbjct: 152 ttaatctcctttactttgagctcagcaaatgcctctgggtcttcagcaaggcctaatggg 211 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 ||||||||||| ||||| || |||||||| Sbjct: 212 tcaaagctgccaccagggtagagtgggtc 240
>gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds Length = 1253 Score = 89.7 bits (45), Expect = 3e-15 Identities = 122/149 (81%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| || || || |||||||| |||||||| |||||||| | ||| | |||||| Sbjct: 894 ccggtgacaatagcttgaacaaagaatccaaacatagagaacatagcaagtctaccgttc 835 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || |||| |||||||| || ||||| | |||| Sbjct: 834 ttgatctcctttaccttgagctcagcaaatgcctctgggtcttcagcaaggcctaatggg 775 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 || |||||||| ||||| || |||||||| Sbjct: 774 tcgaagctgccaccagggtagagtgggtc 746
>gb|M24072.1|CRECABA C.reinhardtii encoding chlorophyll a/b-binding protein (cabII-1) gene, complete cds Length = 2290 Score = 89.7 bits (45), Expect = 3e-15 Identities = 84/98 (85%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||||||||| || |||||||| |||||||||||| | ||| Sbjct: 1737 gggcccttgccggtcacgatggcctggacgaagaagccgaacatggagaacgatgccagg 1678 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 1677 cggccgttcttgatctccttcaccttcagctcagcgaa 1640
>dbj|AB012641.1| Nicotiana sylvestris Lhcb1*9 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3386 Score = 89.7 bits (45), Expect = 3e-15 Identities = 149/185 (80%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| || || || |||||||| || || || || ||||| |||||||| ||| Sbjct: 2181 aggttctctaatggaccctttccggtgactatagcttgcacgaagaatccaaacatagag 2122 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnaggg 122 ||||||| ||| | || |||||||| | |||||||||||||| ||||| |||| ||| Sbjct: 2121 aacatggcaagtctaccattcttgatttccttcaccttgagctcagcgaaagcctctggg 2062 Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 ||||| || || || | |||||| || || || ||||| |||||||||||||| | |||| Sbjct: 2061 tcttcagcaagacccaatgggtcgaaactaccaccagggtaaagtgggtcaacaacctcg 2002 Query: 183 ccgag 187 ||||| Sbjct: 2001 ccgag 1997
>gb|AY617095.1| Pinus nelsonii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 87.7 bits (44), Expect = 1e-14 Identities = 77/89 (86%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgaacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| ||||||||||| Sbjct: 664 ttgatctccttcaccttcagctccgcgaa 636
>gb|AY617093.1| Pinus remota chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 87.7 bits (44), Expect = 1e-14 Identities = 77/89 (86%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgaacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| ||||||||||| Sbjct: 664 ttgatctccttcaccttcagctccgcgaa 636
>gb|AY617092.1| Pinus monophylla chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 87.7 bits (44), Expect = 1e-14 Identities = 77/89 (86%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgkacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| ||||||||||| Sbjct: 664 ttgatctccttcaccttcagctccgcgaa 636
>gb|DQ252493.1| Solanum tuberosum clone 062G02 chlorophyll a-b binding protein 3C-like mRNA, complete cds Length = 1055 Score = 87.7 bits (44), Expect = 1e-14 Identities = 124/152 (81%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| || || || |||||||| |||||||| |||||||| | ||| | ||| ||| Sbjct: 745 ccggtgacaatagcttggacaaagaatccaaacatagagaacatagcaagtctgccattc 686 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||| | || ||||||||||| || || |||| ||||| || || ||||| | |||| Sbjct: 685 ttgatttccttaaccttgagctcagcaaaagcctctgggtcatcagcaaggcccaatggg 626 Query: 144 tcaaagctgcctccaggataaagtgggtcaac 175 |||||||| || ||||| |||||||||||||| Sbjct: 625 tcaaagctaccaccagggtaaagtgggtcaac 594
>emb|X61915.1|PTCABP P.thunbergii cab gene Length = 5419 Score = 85.7 bits (43), Expect = 5e-14 Identities = 108/131 (82%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| ||||| ||||| || ||||| || |||||||||||||||| || Sbjct: 2984 gggcccttcccggtcacgattgcctgaacgaagaaaccgaacatggagaacatggccagc 2925 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 || |||||||| |||| |||||||| ||||||||||| |||| ||||| ||||| || Sbjct: 2924 cgaccgttcttaatctccttcaccttcagctccgcgaaggcctcggggtcgtcggccagc 2865 Query: 135 ccgagtgggtc 145 || |||||||| Sbjct: 2864 cccagtgggtc 2854
>emb|AJ313013.1|PCO313013 Pinus contorta cab gene for chlorophyll a/b binding protein Length = 1197 Score = 85.7 bits (43), Expect = 5e-14 Identities = 94/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 817 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 758 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||||||||| Sbjct: 757 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaa 706
>gb|AY617083.1| Pinus radiata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 85.7 bits (43), Expect = 5e-14 Identities = 94/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||||||||| Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaa 636
>gb|AY617082.1| Pinus ponderosa chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 85.7 bits (43), Expect = 5e-14 Identities = 94/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||||||||| Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaa 636
>gb|AY617081.1| Pinus echinata chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 762 Score = 85.7 bits (43), Expect = 5e-14 Identities = 94/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||||||||| Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaa 636
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 85.7 bits (43), Expect = 5e-14 Identities = 79/92 (85%) Strand = Plus / Minus Query: 21 ttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccg 80 |||||||| ||||||||||| || ||||| || |||||||||||||| | || || ||| Sbjct: 618 ttgccggtcacgatggcctggacgaagaatccgaacatggagaacatcgccagccgtccg 559 Query: 81 ttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||| |||||||| ||||||||||| Sbjct: 558 ttcttgatctccttcaccttcagctccgcgaa 527
>emb|X12981.1|GMCAB3 Soybean Cab3 gene for PSII LHCII chlorophyll a/b binding protein Length = 1361 Score = 85.7 bits (43), Expect = 5e-14 Identities = 144/179 (80%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| |||||||| ||||||||||||||||| |||||||||| | || |||||| Sbjct: 948 ccggtgacaatggcctgaacaaagaagccaaacatagagaacatggccaatcgtccgttc 889 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 |||| | |||||||| ||||| || || |||| ||||| || || ||||| | |||| Sbjct: 888 ttgagttccttcaccttaagctcagcaaaagcctctgggtcatcagcaaggcccaatggg 829 Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaat 202 || |||||||| || || || | ||||||| || ||| ||||| |||||||| ||||| Sbjct: 828 tcgaagctgccacctgggtagattgggtcagtgacctcaccgagggggccaccagcaat 770
>gb|U51633.1|PPU51633 Pinus palustris type 1 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb1) mRNA, partial cds Length = 414 Score = 85.7 bits (43), Expect = 5e-14 Identities = 94/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 218 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 159 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||||||||| Sbjct: 158 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaa 107
>gb|AY617096.1| Picea sitchensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 763 Score = 83.8 bits (42), Expect = 2e-13 Identities = 148/185 (80%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| ||||||||||||||||| | ||||| || ||||| || ||||||| | || Sbjct: 730 cctttaccggtgacgatggcctggncgaagaatccgaacatagaaaacatggccaaccgc 671 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 |||||||||| || |||||||| ||||||||||| || | ||||| || || |||||| Sbjct: 670 ccgttcttgagctccttcaccttcagctccgcgaaagcgtccgggtcgtcagcaaggccg 611 Query: 138 agtgggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccg 197 || ||||| |||||||| || || || | |||||| |||||| ||||| |||||||| Sbjct: 610 agcgggtcgaagctgcccccggggtagatggggtcagtgatctctccgagagggccacct 551 Query: 198 gcaat 202 ||||| Sbjct: 550 gcaat 546
>gb|AY617085.1| Pinus merkusii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 83.8 bits (42), Expect = 2e-13 Identities = 125/154 (81%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| |||||||| |||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacaatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||||| | || ||||||||||||| |||||||| ||||||||||| || | || Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaaagcgtcag 628 Query: 121 ggtcttcggctaggccgagtgggtcaaagctgcc 154 |||| || || || || || ||||| |||||||| Sbjct: 627 ggtcgtccgcaagtcccagcgggtcgaagctgcc 594
>emb|AJ309102.1|PPI309102 Pinus pinaster partial mRNA for putative chlorophyll A-B binding protein type I Length = 684 Score = 83.8 bits (42), Expect = 2e-13 Identities = 92/110 (83%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| || |||||||| |||||||||||||| | || || |||||||| |||| ||| Sbjct: 484 gcctgcacgaagaagccgaacatggagaacatcgccagccgcccgttcttaatctccttc 425 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtc 145 ||||| |||||||||||||||| ||||| ||||| || || |||||||| Sbjct: 424 accttcagctccgcgaacgcctccgggtcatcggccagccccagtgggtc 375
>gb|AY105650.1| Zea mays PCO135935 mRNA sequence Length = 1366 Score = 83.8 bits (42), Expect = 2e-13 Identities = 87/103 (84%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | ||||||| |||||||||| |||||| | |||||| | ||||||| Sbjct: 947 cgaggttctcgacggggccttcgccggtgacgtaggcctggatgaagaaggcgaacatgg 888 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgag 103 ||||||||| || |||||||||||||||| ||||||||||| Sbjct: 887 agaacatggcgagccggccgttcttgatctccttcaccttgag 845
>emb|X68333.1|HHLHC H.helix mRNA for light harvesting chlorophyll a/b binding protein Length = 686 Score = 83.8 bits (42), Expect = 2e-13 Identities = 137/170 (80%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| ||||||||||||||||||| ||| | || ||||||| | Sbjct: 479 atggcctgaacaaagaaaccaaacatggagaacatggcaagtcttccattcttgagttcc 420 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 || ||||| ||||| || || || | ||||| || || ||||| | |||||| || || Sbjct: 419 ttaaccttaagctcagcaaaggcttctgggtcctcagcaaggcctaatgggtcgaaactt 360 Query: 153 cctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaat 202 ||||| || |||||||||||||| | ||| |||||||| ||||||||||| Sbjct: 359 cctccggggtaaagtgggtcaacaacctcaccgagtggtccaccggcaat 310
>gb|U23188.1|ZMU23188 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-1) mRNA, complete cds Length = 957 Score = 83.8 bits (42), Expect = 2e-13 Identities = 87/103 (84%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | ||||||| |||||||||| |||||| | |||||| | ||||||| Sbjct: 805 cgaggttctcgacggggccttcgccggtgacgtaggcctggatgaagaaggcgaacatgg 746 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgag 103 ||||||||| || |||||||||||||||| ||||||||||| Sbjct: 745 agaacatggcgagccggccgttcttgatctccttcaccttgag 703
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 81.8 bits (41), Expect = 8e-13 Identities = 139/169 (82%), Gaps = 3/169 (1%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagcc-aaacatggagaacatggn-aaggcggccgttcttgatcttnt 93 ||||| ||||| ||||| |||||||||||||| || ||| | |||||||||||||| | Sbjct: 753 gcctggacaaaaaagccgaaacatggagaacagggccaagcctgccgttcttgatctcct 694 Query: 94 tcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgc 153 ||||||| ||||| ||||| |||| ||||| ||||| ||||| || ||||| ||||||| Sbjct: 693 tcaccttcagctcggcgaaggcctcggggtcgtcggcgaggccaagcgggtcgaagctgc 634 Query: 154 ctccaggataaagtgggtcaacgatc-tcgccgagtgggccaccggcaa 201 | || || ||||| ||||| || | | |||||||| || |||||||||| Sbjct: 633 cgccggggtaaagggggtcgaccaccttcgccgaggggcccaccggcaa 585
>gb|S73603.1| Pinus thunbergii chlorophyll a/b-binding protein (LHCPII) mRNA, complete cds Length = 998 Score = 81.8 bits (41), Expect = 8e-13 Identities = 112/137 (81%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| |||||||| |||||||| || ||||| || |||||||| ||||||| | || Sbjct: 776 cctttcccggtgacaatggcctgcacgaagaatccgaacatggaaaacatggccaaccgc 717 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 ||||||||||||| |||||||| ||||||||||| || | |||||| || || || || Sbjct: 716 ccgttcttgatctccttcaccttcagctccgcgaaagcgtcagggtcgtccgcaagtccc 657 Query: 138 agtgggtcaaagctgcc 154 || ||||| |||||||| Sbjct: 656 agcgggtcgaagctgcc 640
>gb|AF034631.1|AF034631 Panax ginseng chlorophyll a/b binding protein of LHCII type I precursor (CAB) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1015 Score = 81.8 bits (41), Expect = 8e-13 Identities = 139/173 (80%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| ||||||||||||||||||| || | || ||||||| | Sbjct: 721 atggcctgaacaaagaaaccaaacatggagaacatggcgagccttccattcttgagttcc 662 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 || ||||| ||||| || || || | |||||||| || ||||| | ||||| ||||| Sbjct: 661 ttaaccttaagctcagcaaaggcttctgggtcttcagcaaggcccaaggggtcgaagctt 602 Query: 153 cctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaatgcg 205 ||||| ||||||||||||||||| | ||| || ||||| ||||| |||||||| Sbjct: 601 cctccgggataaagtgggtcaacaacctcacctagtggcccacctgcaatgcg 549
>gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-5) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 81.8 bits (41), Expect = 8e-13 Identities = 112/137 (81%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| || ||||| |||||||| |||||||| | ||| | ||||||||| |||| || Sbjct: 692 gcctgaacgaagaatccaaacatagagaacatagcaagtctgccgttcttaatctccttt 633 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||||||||| || || |||| |||||||| || ||||| | |||||| |||||||| Sbjct: 632 accttgagctcagcaaatgcctccgggtcttcagcaaggcctaatgggtcgaagctgcca 573 Query: 156 ccaggataaagtgggtc 172 ||||| || |||||||| Sbjct: 572 ccagggtagagtgggtc 556
>gb|U21113.1|STU21113 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-4) gene, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 81.8 bits (41), Expect = 8e-13 Identities = 121/149 (81%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || |||||||| |||||||| |||||||| |||||||| | ||| | |||||| Sbjct: 704 ccggtaacaatggcctgaacaaagaatccaaacatagagaacatagcaagtctaccgttc 645 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || |||| ||||| || || ||||| | ||| Sbjct: 644 ttgatctcctttaccttgagctcagcaaatgcctctgggtcatcagcaaggcctaacggg 585 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 ||||||||||| || || || |||||||| Sbjct: 584 tcaaagctgccaccggggtagagtgggtc 556
>gb|DQ018375.1| Pinus gerardiana chloroplast putative light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 760 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| |||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacaatggcctgcacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| ||||||||||| Sbjct: 664 ttgatctccttcaccttcagctccgcgaa 636
>gb|AY617094.1| Pinus longaeva chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 759 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| |||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 713 ccggtgacaatggcctgaacgaagaatccgaacatggaaaacatggccaagcgcccgttc 654 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| ||||||||||| Sbjct: 653 ttgatctccttcaccttcagctccgcgaa 625
>gb|AY617091.1| Pinus strobus chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgcacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 |||| || |||||||| ||||||||||| Sbjct: 664 ttgagctccttcaccttcagctccgcgaa 636
>gb|AY617090.1| Pinus monticola chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgcacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 |||| || |||||||| ||||||||||| Sbjct: 664 ttgagctccttcaccttcagctccgcgaa 636
>gb|AY617089.1| Pinus lambertiana chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgcacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 |||| || |||||||| ||||||||||| Sbjct: 664 ttgagctccttcaccttcagctccgcgaa 636
>gb|AY617088.1| Pinus flexilis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 79.8 bits (40), Expect = 3e-12 Identities = 76/89 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||||||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgatggcctgcacgaagaatccgaacatggaaaacatggccaagcgyccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 |||| || |||||||| ||||||||||| Sbjct: 664 ttgagctccttcaccttcagctccgcgaa 636
>gb|AY617086.1| Pinus roxburghii chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 79.8 bits (40), Expect = 3e-12 Identities = 102/124 (82%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| |||||||| |||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacaatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaacgcctnag 120 | ||||||| | || ||||||||||||| |||||||| ||||||||||| || | || Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctccgcgaaagcgtcag 628 Query: 121 ggtc 124 |||| Sbjct: 627 ggtc 624
>gb|AF247178.1|AF247178 Picea glauca needle chlorophyll a/b-binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 1096 Score = 79.8 bits (40), Expect = 3e-12 Identities = 85/101 (84%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||| ||||| || |||||||| |||||||||||||||| || Sbjct: 789 gggcccttgccggttacgattgcctgcacgaagaagccgaacatggagaacatggccagc 730 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgc 115 || |||||||| | || |||||||| |||||||| ||||| Sbjct: 729 cgcccgttctttagctccttcaccttcagctccgcaaacgc 689
>emb|Z49749.1|PMLHCABBP P.menziesii mRNA for light-harvesting chlorophyll a/b binding protein of photosystem II Length = 772 Score = 79.8 bits (40), Expect = 3e-12 Identities = 96/116 (82%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| ||||| ||||| || |||||||| |||||||||||||| | || Sbjct: 622 gggcccttgccggtcacgattgcctgcacgaagaagccgaacatggagaacatcgccagc 563 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggc 130 || |||||||| | || |||||||| ||||||||||| |||| ||||| ||||| Sbjct: 562 cgcccgttctttagctccttcaccttcagctccgcgaaggcctctgggtcgtcggc 507
>gb|AY646197.1| Chlorella pyrenoidosa chloroplast light-harvesting complex II (Lhc II) mRNA, partial cds; nuclear gene for chloroplast product Length = 537 Score = 77.8 bits (39), Expect = 1e-11 Identities = 72/84 (85%) Strand = Plus / Minus Query: 23 gccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgtt 82 |||||| ||||||||||| || |||||||| |||||| |||||||| || || ||||| Sbjct: 471 gccggtcacgatggcctgcacgaagaagccgaacatgctgaacatggccagacgaccgtt 412 Query: 83 cttgatcttnttcaccttgagctc 106 |||||||| |||||||||||||| Sbjct: 411 cttgatctccttcaccttgagctc 388
>gb|AY617084.1| Pinus contorta chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 77.8 bits (39), Expect = 1e-11 Identities = 93/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 747 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 688 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||| ||||| Sbjct: 687 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctctgcgaa 636
>emb|X13407.1|PTCAB Pinus thunbergii cab mRNA for light-harvesting chlorophyll a/b binding protein Length = 978 Score = 77.8 bits (39), Expect = 1e-11 Identities = 107/131 (81%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| ||||| ||||| || ||||| || |||||||||||||||| || Sbjct: 765 gggcccttcccggtcacgattgcctgaacgaagaaaccgaacatggagaacatggccagc 706 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 || |||||||| |||| |||||||| ||||||||| | |||| ||||| ||||| || Sbjct: 705 cgaccgttcttaatctctttcaccttcagctccgcgcaggcctcggggtcgtcggccagc 646 Query: 135 ccgagtgggtc 145 || |||||||| Sbjct: 645 cccagtgggtc 635
>emb|X67714.1|PCCABA P.contorta cab gene for chlorophyll a/b binding protein Length = 2574 Score = 77.8 bits (39), Expect = 1e-11 Identities = 93/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| ||||||||||||||||| || ||||| || ||||||| Sbjct: 1895 cgaggttctcgatgggtcctttcccggtgacgatggcctgcacgaagaatccgaacatgg 1836 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 | ||||||| | || ||||||||||||| |||||||| ||||| ||||| Sbjct: 1835 aaaacatggccaaccgcccgttcttgatctccttcaccttcagctctgcgaa 1784
>emb|X81808.1|PALHCB1 P.abies (L.)Karst. Lhcb1*1 mRNA for light-harvesting chlorophyll a/b-binding protein Length = 1078 Score = 77.8 bits (39), Expect = 1e-11 Identities = 93/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 ||||||||||||| || |||||||| || ||||||||||| || ||||| || ||||||| Sbjct: 767 cgaggttctctaggggtcctttgcctgtcacgatggcctggacgaagaacccgaacatgg 708 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||||||| | || |||||||| | || |||||||| ||||| ||||| Sbjct: 707 agaacatggccaaccgcccgttctttagctccttcaccttcagctctgcgaa 656
>emb|X14505.1|PSCABIIA Pinus sylvestris cab II/1A mRNA for chlorophyll a/b-binding protein Length = 1083 Score = 77.8 bits (39), Expect = 1e-11 Identities = 93/112 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || |||||||| || ||||| ||||| || |||||||| ||||||| Sbjct: 821 cgaggttctcgatgggtcctttgcccgtcacgatcgcctgcacgaagaagccgaacatgg 762 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||||||| | || ||||||||||||| ||||| || ||||||||||| Sbjct: 761 agaacatggccaaccgtccgttcttgatctccttcactttcagctccgcgaa 710
>gb|U39475.1|GMU39475 Glycine max chlorophyll a/b-binding protein (cab3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 977 Score = 77.8 bits (39), Expect = 1e-11 Identities = 143/179 (79%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| |||||||| |||||||| |||||||| |||||||||| | | |||||| Sbjct: 729 ccggtgacaatggcctgaacaaagaacccaaacatagagaacatggccaatctcccgttc 670 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 |||| | |||||||| ||||| || || |||| ||||| || || ||||| | |||| Sbjct: 669 ttgagttccttcaccttaagctcagcaaaagcctctgggtcatcagcaaggcccaatggg 610 Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaat 202 ||||||||||| ||||| || | ||||||| || ||| ||||| || ||||| ||||| Sbjct: 609 tcaaagctgccaccagggtagattgggtcagtgacctcaccgaggggcccaccagcaat 551
>gb|DQ460158.1| Nicotiana tabacum cDNA-AFLP fragment H-N_BC4M24-157 sequence Length = 112 Score = 75.8 bits (38), Expect = 5e-11 Identities = 51/56 (91%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaag 73 ||||| ||||||||||| ||||| |||||||| ||||||||||||||||||| ||| Sbjct: 56 ccttttccggtgacgatagcctgaacaaagaatccaaacatggagaacatggcaag 1
>emb|AJ538493.1|NTA538493 Nicotiana tabacum cDNA-AFLP-fragment BC2-M31-012 Length = 321 Score = 75.8 bits (38), Expect = 5e-11 Identities = 142/178 (79%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||| |||| || || || ||||| |||||||| |||||||||| ||| | ||||||| Sbjct: 284 ccggtggcgatagcatgaacgaagaatccaaacatagagaacatggcaagtctgccgttc 225 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||| | || ||||||||||| || || || | |||||||| || || || | |||| Sbjct: 224 ttgatttcctttaccttgagctcagcaaaagcttctgggtcttcagcaagacccaatggg 165 Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaa 201 || ||||| || ||||| || ||||||||||| | ||| ||||| || ||||| |||| Sbjct: 164 tcgaagctaccaccagggtagagtgggtcaacaacctcaccgagaggtccaccagcaa 107
>emb|X02359.1|PECAB22L Petunia gene for chlorophyll a/b binding protein cab 22L Length = 1187 Score = 75.8 bits (38), Expect = 5e-11 Identities = 127/158 (80%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||||||||| || || | |||||| ||||||||||||||||| | ||| Sbjct: 949 gggccctttccggtgacgatagcttgaataaagaatccaaacatggagaacatagcaagt 890 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 | ||| |||||| | | ||||||||||| || || || |||| || || ||||| ||| Sbjct: 889 ctgccattcttggtttccttcaccttgagttcagcaaaagcctccggatcctcggcaagg 830 Query: 135 ccgagtgggtcaaagctgcctccaggataaagtgggtc 172 || | |||||| |||||||| || || ||||||||||| Sbjct: 829 cccaatgggtcgaagctgccaccggggtaaagtgggtc 792
>gb|K00975.1|PETCAB10 Petunia major chlorophyll a/b binding protein (Cab) clone pCab10, 3' end and flank Length = 367 Score = 75.8 bits (38), Expect = 5e-11 Identities = 71/83 (85%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| ||||| || ||||||||||||||||| | ||| | || ||| Sbjct: 137 ccggtgacgatagcctgaacaaaaaatccaaacatggagaacatagcaagtctaccattc 78 Query: 84 ttgatcttnttcaccttgagctc 106 ||||||| |||||||||||||| Sbjct: 77 ttgatctccttcaccttgagctc 55
>gb|U23189.1|ZMU23189 Zea mays chlorophyll a/b-binding apoprotein CP26 (Lhcb5-2) mRNA, complete cds Length = 1073 Score = 75.8 bits (38), Expect = 5e-11 Identities = 86/103 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | ||||||| |||||||||| |||||| | |||||| | ||||||| Sbjct: 803 cgaggttctccacggggccttcgccggtgacgtaggcctggatgaagaaggcgaacatgg 744 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgag 103 ||||||| | || |||||||||||||||| ||||||||||| Sbjct: 743 agaacatcgcgagccggccgttcttgatctccttcaccttgag 701
>gb|AF479778.1| Chlamydomonas reinhardtii major light-harvesting complex II protein m9 (Lhcbm9) mRNA, complete cds Length = 1221 Score = 73.8 bits (37), Expect = 2e-10 Identities = 82/98 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||| || |||||||| || |||||||| || |||||||||| ||| Sbjct: 708 gggcccttgccggtcacaatggcctggacgaagaagccgaaggacgagaacatggccagg 649 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| |||||||| ||||| ||||| Sbjct: 648 cggccgttcttgatctccttcaccttcagctcagcgaa 611
>emb|Z13987.1|STCABPSII S.tuberosum gene for chlorophyll a/b-binding protein PS II type I Length = 2432 Score = 73.8 bits (37), Expect = 2e-10 Identities = 129/161 (80%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 |||||||| |||||||| || || || || ||||| ||||||||||||||||| | ||| Sbjct: 1619 gggccttttccggtgacaatagcttgaacgaagaatccaaacatggagaacatagcaagt 1560 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctagg 134 | || |||||||| | || || ||||| ||||| || |||| || || || || ||| Sbjct: 1559 ctaccattcttgatttcttttactttgagttccgcaaaagcctctggatcatcagcaagg 1500 Query: 135 ccgagtgggtcaaagctgcctccaggataaagtgggtcaac 175 || | |||||| ||||| || |||||||||||||||||||| Sbjct: 1499 cccaatgggtcgaagctaccaccaggataaagtgggtcaac 1459
>emb|X02358.1|PECAB25 Petunia gene for chlorophyll a/b binding protein cab 25 Length = 1184 Score = 73.8 bits (37), Expect = 2e-10 Identities = 88/106 (83%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| || ||||| || || || |||||||| |||||||||| Sbjct: 960 cgaggttctccaatggaccttttccagtgacaatagcttgtacaaagaatccaaacatgg 901 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 ||||||| | ||| | ||| |||||||||| |||||||||||||| Sbjct: 900 agaacatagcaagtctgccattcttgatctccttcaccttgagctc 855
>gb|M30618.1|TOMCBPD2 Tomato chlorophyll a/b-binding protein Cab-1C gene, 3' end Length = 351 Score = 73.8 bits (37), Expect = 2e-10 Identities = 120/149 (80%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || ||||| || |||||||| |||||||| |||||||| | ||| | |||||| Sbjct: 257 ccggtaacaatggcttgaacaaagaatccaaacatagagaacatagcaagtctaccgttc 198 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| || ||||||||||| || || |||| |||||||| || ||||| | |||| Sbjct: 197 ttgatctcctttaccttgagctcagcaaatgcctctgggtcttcagcaaggcctaatggg 138 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 || ||||| || || || || |||||||| Sbjct: 137 tcgaagcttccacctgggtagagtgggtc 109
>gb|DQ226725.1| Boechera divaricarpa isolate SLW-A-F06 mRNA sequence Length = 452 Score = 71.9 bits (36), Expect = 7e-10 Identities = 61/70 (87%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| || ||||| ||||| || |||||||| ||||||||||||||||||| ||| || Sbjct: 308 cctttaccagtgacaatggcttggacaaagaatccaaacatggagaacatggcaagacga 249 Query: 78 ccgttcttga 87 |||||||||| Sbjct: 248 ccgttcttga 239
>gb|AY617087.1| Pinus chiapensis chloroplast light harvesting chlorophyll a/b binding protein (ifg1934) gene, partial cds; nuclear gene for chloroplast product Length = 770 Score = 71.9 bits (36), Expect = 7e-10 Identities = 75/89 (84%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| || ||||| || |||||||| ||||||| | ||| |||||| Sbjct: 724 ccggtgacgattgcctgcacgaagaatccgaacatggaaaacatggccaagcgcccgttc 665 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 |||| || |||||||| ||||||||||| Sbjct: 664 ttgagctccttcaccttcagctccgcgaa 636
>gb|AF072931.1|AF072931 Medicago sativa chlorophyll a/b binding protein (CARCAB1) mRNA, complete cds Length = 983 Score = 71.9 bits (36), Expect = 7e-10 Identities = 113/140 (80%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| |||||||| || ||||| |||||||||| | | ||||||||||| | || Sbjct: 746 gcctgaacaaagaatccgaacatagagaacatggctaatctgccgttcttgagttcctta 687 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||| | ||| ||||| |||| ||||| || |||||||| | |||||||||||||||| Sbjct: 686 accttcaactctgcgaaagcctctgggtcgtcagctaggcccaatgggtcaaagctgcct 627 Query: 156 ccaggataaagtgggtcaac 175 || || || ||||||||||| Sbjct: 626 cctgggtatagtgggtcaac 607
>gb|M14449.1|TOMCBPG Tomato chlorophyll a/b-binding protein gene Cab-1D, complete cds Length = 351 Score = 71.9 bits (36), Expect = 7e-10 Identities = 113/140 (80%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 ||||| || |||||||| |||||||| |||||||| | ||| | |||||||| |||| Sbjct: 248 atggcttgaacaaagaatccaaacatagagaacatagcaagtctaccgttcttaatctcc 189 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 || ||||||||||| || || |||| ||||||||| || ||||| | |||||| ||||| Sbjct: 188 ttaaccttgagctcagcaaatgcctcagggtcttcagcaaggcctaatgggtcgaagctt 129 Query: 153 cctccaggataaagtgggtc 172 || || || || |||||||| Sbjct: 128 ccaccggggtagagtgggtc 109
>dbj|D14002.1|LAUCAB Lettuce mRNA for light-harvesting chlorophyll a/b-binding protein (LHCP), complete cds Length = 905 Score = 71.9 bits (36), Expect = 7e-10 Identities = 140/176 (79%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 ||||| ||||| || |||||||| ||||||||||||||||| | || | || |||||| Sbjct: 748 gtgacaatggcttgaacaaagaacccaaacatggagaacatagccagtctcccattcttg 689 Query: 87 atcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtca 146 |||| |||||||| | ||| || || |||| || || || || ||||| | |||||| Sbjct: 688 atctccttcaccttcaactcagcaaaagcctctggatcatctgcaaggcccaatgggtcg 629 Query: 147 aagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaat 202 ||||| || ||||| |||||||||||||| | ||| || | ||| ||||||||||| Sbjct: 628 aagctaccaccagggtaaagtgggtcaacaacctcacccaatggtccaccggcaat 573
>gb|M97171.1|SOYCAB6A Glycine max chlorophyll a/b binding protein type II (Cab-6) gene, complete cds; nuclear gene for chloroplast product Length = 1322 Score = 69.9 bits (35), Expect = 3e-09 Identities = 63/73 (86%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||| ||||| |||||||| |||||||| ||||||||||||||||| | | | Sbjct: 1028 gggcccttgccagtgacaatggcctgaacaaagaaaccaaacatggagaacatagccaag 969 Query: 75 cggccgttcttga 87 || |||||||||| Sbjct: 968 cgaccgttcttga 956
>gb|AY554168.1| Nicotiana tabacum chloroplast chlorophyll a-b binding protein mRNA, partial cds; nuclear gene for chloroplast product Length = 600 Score = 69.9 bits (35), Expect = 3e-09 Identities = 86/104 (82%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| || |||||||| |||||||| || || || |||||||| || ||||||||| Sbjct: 527 aggttctcaagagggccttttccggtgacaatagcttgaacaaagaatccgaacatggag 468 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 ||||| | | | ||||||||||||| |||||||||||||| Sbjct: 467 aacatagccaatcttccgttcttgatctccttcaccttgagctc 424
>gb|AF165529.1|AF165529 Rumex palustris chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 986 Score = 69.9 bits (35), Expect = 3e-09 Identities = 77/92 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| |||||||||||||||||||| || ||||| || |||||||||||||| | || Sbjct: 764 gggcccttgccggtgacgatggcctggacgaagaatccgaacatggagaacatagctagc 705 Query: 75 cggccgttcttgatcttnttcaccttgagctc 106 | || ||||||| || |||||||||||||| Sbjct: 704 cttccattcttgagctccttcaccttgagctc 673
>gb|L07119.1|COTIIABINA Gossypium hirsutum chloroplast photosystem II chlorophyll A/B-binding protein gene, complete cds Length = 1260 Score = 69.9 bits (35), Expect = 3e-09 Identities = 106/131 (80%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| ||||||||||| || ||||| || ||||| |||||||| | | | |||||| Sbjct: 898 ccggtcacgatggcctgaacgaagaacccgaacattgagaacatagccaacctaccgttc 839 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| |||||||||||||| ||||| |||| ||||| || || | ||| | |||| Sbjct: 838 ttgatctctttcaccttgagctcagcgaatgcctctgggtcatcagcaaagcccaatggg 779 Query: 144 tcaaagctgcc 154 ||||||||||| Sbjct: 778 tcaaagctgcc 768
>emb|X54090.1|GHCAB G.hirsutum cab gene for chlorophyll ab binding protein Length = 1746 Score = 67.9 bits (34), Expect = 1e-08 Identities = 56/64 (87%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 ||||| || ||||| || ||||| ||||||||||||||||| | ||||||||||||||| Sbjct: 1244 gtgacaatagcctggacgaagaacccaaacatggagaacattgccaggcggccgttcttg 1185 Query: 87 atct 90 |||| Sbjct: 1184 atct 1181
>gb|M37489.1|PINCABII2 Pinus sylvestris chlorophyll a/b-binding protein (Cab) mRNA, partial cds Length = 583 Score = 67.9 bits (34), Expect = 1e-08 Identities = 79/95 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| ||||| ||||| || ||||| || |||||||||||||||| || Sbjct: 370 gggcccttcccggtcacgattgcctgaacgaagaaaccgaacatggagaacatggccagc 311 Query: 75 cggccgttcttgatcttnttcaccttgagctccgc 109 || |||||||| |||| |||||||| |||||||| Sbjct: 310 cgaccgttcttaatctccttcaccttcagctccgc 276
>emb|X02356.1|PECAB91R Petunia gene for chlorophyll a/b binding protein cab 91R Length = 1173 Score = 67.9 bits (34), Expect = 1e-08 Identities = 117/146 (80%) Strand = Plus / Minus Query: 30 acgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatc 89 ||||||||||| ||||| || ||||||||||| ||||| | ||| | || ||||||||| Sbjct: 934 acgatggcctgaacaaaaaatccaaacatggaaaacatagcaagtctaccattcttgatc 875 Query: 90 ttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaag 149 | |||||||||||||| || || |||| ||||| || || || || | |||||| || Sbjct: 874 tccttcaccttgagctcagcaaatgcctctgggtcatctgcaagacccaatgggtcgaaa 815 Query: 150 ctgcctccaggataaagtgggtcaac 175 || || || || |||||||||||||| Sbjct: 814 ctaccaccggggtaaagtgggtcaac 789
>gb|K00973.1|PETCAB3 Petunia major chlorophyll a/b binding protein (Cab) clone pCab3, 3' end and flank Length = 511 Score = 67.9 bits (34), Expect = 1e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| || || ||||| || ||||||||||| ||||||| ||| | || ||| Sbjct: 317 ccggtgacgatagcttgaacaaaaaatccaaacatggaaaacatggcaagtctaccattc 258 Query: 84 ttgatcttnttcaccttgagctc 106 ||||||| |||||||||||||| Sbjct: 257 ttgatctccttcaccttgagctc 235
>dbj|AP008949.1| Lotus japonicus genomic DNA, chromosome 2, clone:LjT44M23, TM1572a, complete sequence Length = 48924 Score = 67.9 bits (34), Expect = 1e-08 Identities = 48/53 (90%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||| ||||| || || |||||||| |||||||||||||||||||||||||| Sbjct: 40618 gggcccttgccagtaacaatggcctgaacaaagaagccaaacatggagaacat 40566
>gb|M15214.1|TOMCBPH Tomato chlorophyll a/b-binding protein gene Cab-3T, complete cds Length = 339 Score = 67.9 bits (34), Expect = 1e-08 Identities = 70/83 (84%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 |||||||| || || || |||||||||||||||||||||||||| | ||| | || ||| Sbjct: 257 ccggtgacaatagcttgaacaaagaagccaaacatggagaacatagcaagtctaccattc 198 Query: 84 ttgatcttnttcaccttgagctc 106 ||||||| || ||||||||||| Sbjct: 197 ttgatctcttttaccttgagctc 175
>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 (LHCP) mRNA, partial cds Length = 712 Score = 65.9 bits (33), Expect = 5e-08 Identities = 138/173 (79%), Gaps = 1/173 (0%) Strand = Plus / Minus Query: 30 acgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatc 89 ||||| || || |||||||| || ||||| |||||||| | || | ||| ||||||||| Sbjct: 660 acgatcgcgtgaacaaagaacccgaacatcgagaacatagccagcctgccattcttgatc 601 Query: 90 ttn-ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaa 148 || |||||||| ||||| || || |||| || || || |||||||| || ||||| || Sbjct: 600 ttcgttcaccttcagctcggcaaaagcctttggatcgtcagctaggcccagcgggtcgaa 541 Query: 149 gctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaa 201 |||||| || || || || ||||| || | ||||||||| ||||||||||||| Sbjct: 540 gctgccgccggggtacagggggtcgacaacctcgccgagggggccaccggcaa 488
>gb|DQ124219.1| Fagus sylvatica putative chlorophyll a/b-binding protein mRNA, partial cds Length = 780 Score = 65.9 bits (33), Expect = 5e-08 Identities = 113/141 (80%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| |||||||| |||||||| | || | || ||||||| || Sbjct: 683 atggcctggacaaagaaaccaaacatagagaacatagccagtcttccattcttgagctcc 624 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 |||||||| ||||| || || |||| ||||| || || ||||| | |||||||||||| Sbjct: 623 ttcaccttaagctcagcaaaagcctctgggtcatcagcaaggcctaatgggtcaaagctt 564 Query: 153 cctccaggataaagtgggtca 173 || || || |||||||||||| Sbjct: 563 ccacctgggtaaagtgggtca 543
>emb|X63052.1|HVCP29 Hordeum vulgare gene for CP29 precursor for core chlorophyll a/b binding (CAB) protein of photosystem II (PSII) Length = 2689 Score = 65.9 bits (33), Expect = 5e-08 Identities = 69/82 (84%) Strand = Plus / Minus Query: 23 gccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgtt 82 |||||||||| |||||| | |||||||| | |||||||||||||| || || ||||| Sbjct: 2144 gccggtgacgtaggcctggatgaagaagcccagcatggagaacatggccagccgtccgtt 2085 Query: 83 cttgatcttnttcaccttgagc 104 |||||||| |||||||||||| Sbjct: 2084 cttgatctccttcaccttgagc 2063
>emb|X02357.1|PECAB13 Petunia gene for chlorophyll a/b binding protein cab 13 Length = 1019 Score = 65.9 bits (33), Expect = 5e-08 Identities = 87/106 (82%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 |||||||||| | || ||||| |||||||| || || || |||||||| |||||||||| Sbjct: 851 cgaggttctccaatggaccttttccggtgacaatagcttgtacaaagaatccaaacatgg 792 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 ||||||| | ||| | || |||||||||| ||||||| |||||| Sbjct: 791 agaacatagcaagtctaccattcttgatctccttcacctcgagctc 746
>emb|Z29965.1|TRLHCABBP T.repens (Huia) mRNA for light-harvesting chlorophyll a/b binding protein Length = 680 Score = 65.9 bits (33), Expect = 5e-08 Identities = 58/67 (86%) Strand = Plus / Minus Query: 21 ttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccg 80 |||||||| |||||||| || |||||||| ||||||||||||||||| | | |||||| Sbjct: 413 ttgccggtaacgatggcttgaacaaagaaaccaaacatggagaacatagccaatcggccg 354 Query: 81 ttcttga 87 ||||||| Sbjct: 353 ttcttga 347
>gb|AY855171.1| Eleusine coracana subsp. coracana clone 1 light harvesting protein mRNA, partial cds Length = 364 Score = 65.9 bits (33), Expect = 5e-08 Identities = 60/70 (85%) Strand = Plus / Minus Query: 35 ggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttntt 94 |||||| | ||||||| | |||||||||||||||| || | |||||||||||||| || Sbjct: 81 ggcctggataaagaaggcgaacatggagaacatggccagcctgccgttcttgatctcctt 22 Query: 95 caccttgagc 104 |||||||||| Sbjct: 21 caccttgagc 12
>gb|AF003128.1|AF003128 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB2) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1027 Score = 65.9 bits (33), Expect = 5e-08 Identities = 119/149 (79%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||| || ||||| || |||||||| || ||||| |||||||||| | | |||||| Sbjct: 722 ccggtcacaatggcttggacaaagaacccgaacattgagaacatggctaatctaccgttc 663 Query: 84 ttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtggg 143 ||||||| |||||||||||||| || || |||| ||||| ||||| | ||| | |||| Sbjct: 662 ttgatctccttcaccttgagctcagcaaaagcctctgggtcctcggccaagcccaatggg 603 Query: 144 tcaaagctgcctccaggataaagtgggtc 172 |||||||| || || || || |||||||| Sbjct: 602 tcaaagctaccacctgggtagagtgggtc 574
>gb|M34396.1|PMJCABF3 Polystichum munitum chlorophyll a/b-binding protein F3 gene (CABF3), complete cds Length = 1846 Score = 65.9 bits (33), Expect = 5e-08 Identities = 47/52 (90%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatgg 69 ||||| || ||||| ||||| || |||||||||||||||||||||||||||| Sbjct: 1369 cctttaccagtgacaatggcttgcacaaagaagccaaacatggagaacatgg 1318
>gb|L36064.1|PRULHP Prunus persica (clone pAB19) light harvesting chlorophyll a/b binding protein (Lhcb-Pp1) gene, complete cds Length = 1912 Score = 65.9 bits (33), Expect = 5e-08 Identities = 134/169 (79%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| ||||||||||| ||||||| || | || ||||| | || Sbjct: 1036 atggcctgcacaaagaaaccaaacatggaaaacatggcgagtcttccattcttcagctcc 977 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 |||||||| ||||| ||||| |||| || || || || ||||| | |||||||||||| Sbjct: 976 ttcaccttcagctcagcgaaagcctctggatcctctgcaaggcctaatgggtcaaagctc 917 Query: 153 cctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaa 201 || || ||||| | ||||||| |||||| ||||| || ||||| |||| Sbjct: 916 ccacctggatataatgggtcagtgatctctccgagaggcccacctgcaa 868
>dbj|AB006081.1| Fagus crenata mRNA for chlorophyll a/b-binding protein, complete cds Length = 1010 Score = 65.9 bits (33), Expect = 5e-08 Identities = 113/141 (80%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| |||||||| |||||||| |||||||| | || | || ||||||| || Sbjct: 739 atggcctgaacaaagaatccaaacatagagaacatagccagtcttccattcttgagctcc 680 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 |||||||| ||||| || || |||| ||||| || || ||||| | |||||||||||| Sbjct: 679 ttcaccttaagctcagcaaaagcctctgggtcatcagcaaggcctaatgggtcaaagctt 620 Query: 153 cctccaggataaagtgggtca 173 || || || |||||||||||| Sbjct: 619 ccacctgggtaaagtgggtca 599
>gb|AY845253.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb1 mRNA, complete cds Length = 801 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Minus Query: 123 tcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaacgatctcg 182 ||||| |||| ||| | ||| |||||||| || |||||||||||||||||||| | ||| Sbjct: 608 tcttcagctaagcctaatggatcaaagctaccaccaggataaagtgggtcaacaacctca 549 Query: 183 ccgagtgggccaccggcaat 202 || || |||||||||||||| Sbjct: 548 ccaagagggccaccggcaat 529
>dbj|AP006706.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09I23, TM0590a, complete sequence Length = 16141 Score = 63.9 bits (32), Expect = 2e-07 Identities = 106/132 (80%) Strand = Plus / Plus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 ||||| || ||||| ||||| || |||||||| ||||||||||||||||||| | | Sbjct: 11256 cctttcccagtgacaatggcttgaacaaagaaaccaaacatggagaacatggccaacctt 11315 Query: 78 ccgttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccg 137 || |||||||||| ||||| || ||||| ||||| | |||||| ||||| |||||| Sbjct: 11316 ccattcttgatctccttcactttaagctcagcgaaagtggcagggtcgtcggcgaggccg 11375 Query: 138 agtgggtcaaag 149 || ||||||||| Sbjct: 11376 agagggtcaaag 11387
>gb|U43707.1|PAU43707 Picea abies chlorophyll a/b binding protein of PS II mRNA, partial cds Length = 551 Score = 63.9 bits (32), Expect = 2e-07 Identities = 91/112 (81%) Strand = Plus / Minus Query: 1 cgaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgg 60 ||||||| || || || |||||||| || ||||||||||| || ||||| || ||||||| Sbjct: 325 cgaggttntcgaggggtcctttgcccgtcacgatggcctggacgaagaacccgaacatgg 266 Query: 61 agaacatggnaaggcggccgttcttgatcttnttcaccttgagctccgcgaa 112 ||||||||| | || |||||||| | || |||||||| ||||| ||||| Sbjct: 265 agaacatggccaaccgcccgttctttagctccttcaccttcagctctgcgaa 214
>dbj|D00571.1|PYPLHABBP Pyrus pyrifolia var. culta mRNA for light harvesting a/b binding protein, complete cds Length = 1055 Score = 61.9 bits (31), Expect = 7e-07 Identities = 62/73 (84%) Strand = Plus / Minus Query: 18 cctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcgg 77 |||||||| || ||||| ||||| || |||||||| |||||||||||||||| | || Sbjct: 811 cctttgcccgtcacgatcgcctgcacgaagaagccgaacatggagaacatggccaaccgt 752 Query: 78 ccgttcttgatct 90 ||||||||||||| Sbjct: 751 ccgttcttgatct 739
>gb|AF139465.2|AF139465 Vigna radiata LHCII type III chlorophyll a/b binding protein (CipLhcb3) mRNA, complete cds; nuclear gene for chloroplast product Length = 1047 Score = 61.9 bits (31), Expect = 7e-07 Identities = 76/92 (82%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 |||||||| || || || ||||| || |||||||| ||||||||||||||||||| || Sbjct: 786 gggcctttaccagttacaatggcttgaacaaagaacccaaacatggagaacatggccagc 727 Query: 75 cggccgttcttgatcttnttcaccttgagctc 106 | || |||||||||| ||||| |||||||| Sbjct: 726 cttccattcttgatctccttcactttgagctc 695
>emb|AJ538488.1|NTA538488 Nicotiana tabacum cDNA-AFLP-fragment BC2-M23-037 Length = 135 Score = 61.9 bits (31), Expect = 7e-07 Identities = 85/104 (81%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||| ||||| ||||| || |||||||| ||||| || ||||| |||||||| ||| Sbjct: 109 aggttctccagcggaccttttccagtgacgatagcctgaacgaagaatccaaacatagag 50 Query: 63 aacatggnaaggcggccgttcttgatcttnttcaccttgagctc 106 ||||| | ||| | || || || |||| |||||||||||||| Sbjct: 49 aacatagcaagtctaccattttttatctccttcaccttgagctc 6
>gb|J01253.1|PEACAB15 Pea major chlorophyll a/b-binding thylakoid protein (polypeptide 15) mRNA, clone pAB96 Length = 822 Score = 61.9 bits (31), Expect = 7e-07 Identities = 52/59 (88%) Strand = Plus / Minus Query: 144 tcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggcaat 202 |||||||| || |||||||||||||||||||| | ||| || || |||||||||||||| Sbjct: 474 tcaaagctaccaccaggataaagtgggtcaacaacctcaccaagagggccaccggcaat 416
>gb|BT012757.1| Lycopersicon esculentum clone 113701F, mRNA sequence Length = 890 Score = 60.0 bits (30), Expect = 3e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||||||||||||||| || || || || ||||| ||||||||||||||||| Sbjct: 702 gggcctttgccggtgacaatagcttgaacgaagaatccaaacatggagaacat 650
>dbj|AB206466.1| Adiantum capillus-veneris AcCab1 gene for chlorophyll a/b-binding protein, complete cds Length = 1500 Score = 60.0 bits (30), Expect = 3e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||| || |||||||| |||||||| |||||||| || |||||||||||||| Sbjct: 1309 gggccctttccggtgacaatggcctgaacaaagaaaccgaacatggagaacat 1257
>gb|AF279248.1|AF279248 Vigna radiata LHCII type II chlorophyll a/b-binding protein (CipLhcb2) mRNA, complete cds; nuclear gene for chloroplast product Length = 1033 Score = 60.0 bits (30), Expect = 3e-06 Identities = 47/53 (88%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||||||||| ||||| ||||| || |||||||| ||||||| ||||||||| Sbjct: 769 gggcctttgccagtgacaatggcttgaacaaagaaaccaaacacggagaacat 717
>emb|X16536.1|GMCAB5 G.max DNA for Cab5 Length = 1467 Score = 60.0 bits (30), Expect = 3e-06 Identities = 110/138 (79%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| |||||||| ||||||||||||||||||| | | || ||||||| || ||| Sbjct: 1016 gcctgaacaaagaaaccaaacatggagaacatggccaacctaccattcttgagctctttc 957 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||| | ||| || || |||| ||||| || || ||||| | ||||||||||||||| Sbjct: 956 accttcaactcagcaaaagcctctgggtcatcagcaaggcccaatgggtcaaagctgcca 897 Query: 156 ccaggataaagtgggtca 173 || ||||| | ||||||| Sbjct: 896 cctggatagattgggtca 879
>gb|K00974.1|PETCAB4 Petunia major chlorophyll a/b binding protein (Cab) clone pCab4, 3' end Length = 387 Score = 60.0 bits (30), Expect = 3e-06 Identities = 113/142 (79%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttn 92 |||||||| ||||| || ||||||||||| ||||| | ||| | || |||||||||| Sbjct: 293 atggcctgaacaaaaaatccaaacatggaaaacatagcaagtctaccattcttgatctcc 234 Query: 93 ttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctg 152 |||||||||||||| || || |||| ||||| || || || || | ||| || ||||| Sbjct: 233 ttcaccttgagctcagcaaatgcctctgggtcatcagcaagacccaatggatcgaagcta 174 Query: 153 cctccaggataaagtgggtcaa 174 || ||||| || |||||||||| Sbjct: 173 ccaccagggtagagtgggtcaa 152
>gb|U01964.1|GMU01964 Glycine max cv. Dare photosystem II type I chlorophyll a/b-binding protein (lhcb1*7) gene, complete cds Length = 1882 Score = 60.0 bits (30), Expect = 3e-06 Identities = 110/138 (79%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| |||||||| ||||||||||||||||||| | | || ||||||| || ||| Sbjct: 1446 gcctgaacaaagaaaccaaacatggagaacatggccaacctaccattcttgagctctttc 1387 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||| | ||| || || |||| ||||| || || ||||| | ||||||||||||||| Sbjct: 1386 accttcaactcagcaaaagcctctgggtcatcagcaaggcccaatgggtcaaagctgcca 1327 Query: 156 ccaggataaagtgggtca 173 || ||||| | ||||||| Sbjct: 1326 cctggatagattgggtca 1309
>gb|M21396.1|SOYCBPA Soybean light-harvesting chlorophyll a/b-binding protein (LHCPII) mRNA, 3' end Length = 911 Score = 60.0 bits (30), Expect = 3e-06 Identities = 110/138 (79%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| |||||||| ||||||||||||||||||| | | || |||||||||| ||| Sbjct: 634 gcctgaacaaagaaaccaaacatggagaacatggccaacctaccattcttgatctctttc 575 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||| | ||| || || |||| ||||| || || ||| | | ||||||||||||||| Sbjct: 574 accttcaactcagcaaaagcctctgggtcatcagcaagggccaatgggtcaaagctgcca 515 Query: 156 ccaggataaagtgggtca 173 || ||||| | ||||||| Sbjct: 514 cctggatagattgggtca 497
>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein precursor, complete cds Length = 964 Score = 60.0 bits (30), Expect = 3e-06 Identities = 60/71 (84%) Strand = Plus / Minus Query: 30 acgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatc 89 ||||||||||| || ||||| || ||||| |||||||||| | ||||||||||||||| Sbjct: 746 acgatggcctggacgaagaacccgaacattgagaacatggccaatcggccgttcttgatc 687 Query: 90 ttnttcacctt 100 | |||||||| Sbjct: 686 tccttcacctt 676
>emb|X16436.1|SACAB Mustard cab gene for chlorophyll a/b-binding protein Length = 2774 Score = 58.0 bits (29), Expect = 1e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 2282 ccggtgacgatagcctgaacaaagaatccaaacatagagaacat 2239
>emb|X15894.1|SACAB1 Sinapsis alba cab-1 gene for chlorophyll a/b-binding polypeptide Length = 2775 Score = 58.0 bits (29), Expect = 1e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||||||||| ||||| |||||||| |||||||| |||||||| Sbjct: 2283 ccggtgacgatagcctgaacaaagaatccaaacatagagaacat 2240
>gb|M60049.1|DUNCAB D.tertiolecta 28.5-kDa LHCII apoprotein mRNA, complete cds Length = 1041 Score = 58.0 bits (29), Expect = 1e-05 Identities = 80/98 (81%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||| || ||||||||||| || |||||||| | |||||||||| ||| Sbjct: 722 gggcccttgccagtcacgatggcctgcacgaagaagcccaggcaagagaacatggccagg 663 Query: 75 cggccgttcttgatcttnttcaccttgagctccgcgaa 112 |||||||||||||||| || ||||| ||||| ||||| Sbjct: 662 cggccgttcttgatctccttgaccttcagctcagcgaa 625
>gb|M16057.1|CUSLHCPA Cucumber LHCP mRNA encoding chlorophyll a/b-binding protein, partial cds Length = 878 Score = 58.0 bits (29), Expect = 1e-05 Identities = 40/44 (90%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||| ||||| ||||| |||||||| ||||||||||||||||| Sbjct: 674 ccggtaacgatagcctgaacaaagaatccaaacatggagaacat 631
>gb|AY430082.1| Trifolium pratense chlorophyll a/b binding protein mRNA, complete cds; nuclear gene for chloroplast product Length = 987 Score = 56.0 bits (28), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Minus Query: 120 gggtcttcggctaggccgagtgggtcaaagctgcctccaggataaagtgggtcaac 175 ||||| || |||||||| | ||||||||||||||| || || |||||||||||||| Sbjct: 663 gggtcgtcagctaggcctaatgggtcaaagctgccacctgggtaaagtgggtcaac 608
>gb|AF458406.1|AF458406 Brassica oleracea chlorophyll a/b binding protein (CAB1) mRNA, complete cds Length = 980 Score = 56.0 bits (28), Expect = 4e-05 Identities = 73/89 (82%) Strand = Plus / Minus Query: 24 ccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttc 83 ||||||||||| ||||| || ||||| |||||||| |||||||| | | | |||||| Sbjct: 749 ccggtgacgatagcctgaacgaagaatccaaacatagagaacatagccaaccttccgttc 690 Query: 84 ttgatcttnttcaccttgagctccgcgaa 112 ||||||| |||||||| | ||||||||| Sbjct: 689 ttgatctccttcaccttcaactccgcgaa 661
>emb|X16535.1|GMCAB4 G.max DNA for Cab4 Length = 1470 Score = 56.0 bits (28), Expect = 4e-05 Identities = 102/128 (79%) Strand = Plus / Minus Query: 36 gcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttgatcttnttc 95 ||||| |||||||| ||||||||||||||||||| | | || ||||||| || ||| Sbjct: 1019 gcctgaacaaagaatccaaacatggagaacatggccaacctaccattcttgagctccttc 960 Query: 96 accttgagctccgcgaacgcctnagggtcttcggctaggccgagtgggtcaaagctgcct 155 ||||| ||||| || || |||| ||||| || || || || | ||||||||||||||| Sbjct: 959 accttcagctcagcaaaagcctctgggtcatcagcaagacccaatgggtcaaagctgcca 900 Query: 156 ccaggata 163 || ||||| Sbjct: 899 cctggata 892
>dbj|AB012639.1| Nicotiana sylvestris Lhcb1*7 gene for light harvesting chlorophyll a/b-binding protein, complete cds Length = 3663 Score = 56.0 bits (28), Expect = 4e-05 Identities = 53/62 (85%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacatggnaaggcggccgttcttg 86 |||||||| || || |||||||| ||||||||||||||||| | ||| | ||| |||||| Sbjct: 3252 gtgacgatagcttgaacaaagaatccaaacatggagaacatagcaagtctgccattcttg 3193 Query: 87 at 88 || Sbjct: 3192 at 3191
>emb|CT571263.1| Medicago truncatula chromosome 5 clone mte1-7c20, COMPLETE SEQUENCE Length = 127003 Score = 54.0 bits (27), Expect = 2e-04 Identities = 61/73 (83%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| ||||| || || ||||| || |||||||| ||||||||||||||||| | | Sbjct: 51834 gggcccttgccagtaacaatggcttgaacaaagaaaccaaacatggagaacatagccaat 51775 Query: 75 cggccgttcttga 87 ||||||||||||| Sbjct: 51774 cggccgttcttga 51762
>gb|AF003129.1|AF003129 Mesembryanthemum crystallinum chlorophyll a/b-binding protein (CAB3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 1011 Score = 54.0 bits (27), Expect = 2e-04 Identities = 97/121 (80%) Strand = Plus / Minus Query: 81 ttcttgatcttnttcaccttgagctccgcgaacgcctnagggtcttcggctaggccgagt 140 |||||||||| |||||||| | ||| || || |||| ||||| ||||||||||| | | Sbjct: 709 ttcttgatctccttcaccttcaactcggcaaaggcctctgggtcctcggctaggcccaat 650 Query: 141 gggtcaaagctgcctccaggataaagtgggtcaacgatctcgccgagtgggccaccggca 200 ||||||||||| || || || || |||||||| | | ||| || ||||| ||||||||| Sbjct: 649 gggtcaaagctaccaccggggtagagtgggtcgatcacctcaccaagtggcccaccggca 590 Query: 201 a 201 | Sbjct: 589 a 589
>gb|U51634.1|PPU51634 Pinus palustris type 2 light-harvesting chlorophyll a/b-binding polypeptide (Lhcb2) mRNA, partial cds Length = 252 Score = 54.0 bits (27), Expect = 2e-04 Identities = 69/84 (82%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacatggnaagg 74 ||||| || ||||| ||||| ||||| || ||||| || |||||||||||||||| || Sbjct: 84 gggcccttcccggtcacgattgcctgaacgaagaaaccgaacatggagaacatggccagc 25 Query: 75 cggccgttcttgatcttnttcacc 98 || |||||||| |||| |||||| Sbjct: 24 cgaccgttcttaatctccttcacc 1
>gb|AY845254.1| Pisum sativum light-harvesting chlorophyll-a/b binding protein Lhcb2 mRNA, complete cds Length = 798 Score = 52.0 bits (26), Expect = 7e-04 Identities = 46/53 (86%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||| ||||| || || ||||| || |||||||| ||||||||||||||||| Sbjct: 713 gggcccttgccagtaacaatggcttgaacaaagaaaccaaacatggagaacat 661
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds Length = 1044 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 797 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 738 Query: 63 aacat 67 ||||| Sbjct: 737 aacat 733
>ref|NM_102732.2| Arabidopsis thaliana CAB2; chlorophyll binding AT1G29920 (CAB2) mRNA, complete cds Length = 1176 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 798 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 739 Query: 63 aacat 67 ||||| Sbjct: 738 aacat 734
>gb|AY786530.1| Haematococcus pluvialis chloroplast major light-harvesting complex II protein m9 mRNA, partial cds; nuclear gene for chloroplast product Length = 577 Score = 52.0 bits (26), Expect = 7e-04 Identities = 82/99 (82%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 15 gggcctttgccggtgacgatggcctgnacaaagaagcc-aaacatggagaacatggnaag 73 ||||| |||||||| ||||||||||| || |||||||| || ||| |||||||||| | Sbjct: 378 gggcccttgccggtcacgatggcctggacgaagaagccgaagcat-gagaacatggccaa 320 Query: 74 gcggccgttcttgatcttnttcaccttgagctccgcgaa 112 || ||||||||||||| || ||||| ||||| ||||| Sbjct: 319 ccgcccgttcttgatctccttgaccttcagctcagcgaa 281
>gb|AC135460.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0091I11, complete sequence Length = 135993 Score = 52.0 bits (26), Expect = 7e-04 Identities = 80/99 (80%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| | |||||||||| |||||| | ||||| || | |||||| Sbjct: 40182 gaggttctcgacggggccctcgccggtgacgtaggcctggatgaagaaccccagcatgga 40123 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcacctt 100 |||||||| || || ||||||||||||| |||||||| Sbjct: 40122 gaacatggccagccgcccgttcttgatctccttcacctt 40084
>gb|BT015572.1| Arabidopsis thaliana At1g29910 mRNA sequence Length = 762 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 689 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 630 Query: 63 aacat 67 ||||| Sbjct: 629 aacat 625
>gb|DQ471302.1| Carya cathayensis putative chloroplast chlorophyll a/b-binding protein (ABC) mRNA, complete cds; nuclear gene for chloroplast product Length = 993 Score = 52.0 bits (26), Expect = 7e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatgg 69 ||||| || |||||||| ||||||||||||||||||| Sbjct: 701 atggcttggacaaagaacccaaacatggagaacatgg 665
>gb|DQ226787.1| Boechera divaricarpa isolate SLW-B-B06 mRNA sequence Length = 827 Score = 52.0 bits (26), Expect = 7e-04 Identities = 37/41 (90%) Strand = Plus / Minus Query: 27 gtgacgatggcctgnacaaagaagccaaacatggagaacat 67 ||||||||||| || |||||||| |||||||| |||||||| Sbjct: 535 gtgacgatggcttgaacaaagaatccaaacatagagaacat 495
>gb|AY433957.1| Pyrus communis chlorophyll a/b-binding protein mRNA, partial sequence; nuclear gene for chloroplast product Length = 255 Score = 52.0 bits (26), Expect = 7e-04 Identities = 34/37 (91%) Strand = Plus / Minus Query: 33 atggcctgnacaaagaagccaaacatggagaacatgg 69 |||||||| ||||||||||| ||||| |||||||||| Sbjct: 82 atggcctgcacaaagaagccgaacattgagaacatgg 46
>gb|AC139600.16| Medicago truncatula clone mth2-20m4, complete sequence Length = 124732 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 ||||||||||| || || || ||||| || |||||||| || ||||| |||||||| ||| Sbjct: 144 aggttctctagaggtccctttccggttacaatggcctgaacgaagaatccaaacatagag 85 Query: 63 aacat 67 ||||| Sbjct: 84 aacat 80
>gb|BT000726.1| Arabidopsis thaliana clone RAFL06-67-G16 (R11472) putative photosystem II type I chlorophyll a /b binding protein (At1g29920) mRNA, complete cds Length = 1044 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 784 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 725 Query: 63 aacat 67 ||||| Sbjct: 724 aacat 720
>gb|AY267624.1| Bigelowiella natans chlorophyll a/b-binding protein II 2 mRNA, complete cds; nuclear gene for plastid product Length = 1147 Score = 52.0 bits (26), Expect = 7e-04 Identities = 40/45 (88%) Strand = Plus / Minus Query: 46 agaagccaaacatggagaacatggnaaggcggccgttcttgatct 90 ||||||| | |||||||||||| | ||| |||||||||||||||| Sbjct: 926 agaagccgagcatggagaacatagcaagacggccgttcttgatct 882
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein (At1g29930) mRNA, complete cds Length = 835 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 731 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 672 Query: 63 aacat 67 ||||| Sbjct: 671 aacat 667
>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b binding protein (At1g29930) mRNA, complete cds Length = 1014 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 797 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 738 Query: 63 aacat 67 ||||| Sbjct: 737 aacat 733
>gb|AY128345.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding protein, putative (At1g29920) mRNA, complete cds Length = 994 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 784 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 725 Query: 63 aacat 67 ||||| Sbjct: 724 aacat 720
>gb|AY081572.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920) mRNA, complete cds Length = 898 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 731 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 672 Query: 63 aacat 67 ||||| Sbjct: 671 aacat 667
>gb|AY062814.1| Arabidopsis thaliana chlorophyll a/b-binding protein (At1g29920; F1N18.4) mRNA, complete cds Length = 1007 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 783 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 724 Query: 63 aacat 67 ||||| Sbjct: 723 aacat 719
>gb|AY060500.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 804 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 731 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 672 Query: 63 aacat 67 ||||| Sbjct: 671 aacat 667
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1019 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 797 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 738 Query: 63 aacat 67 ||||| Sbjct: 737 aacat 733
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 1045 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 797 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 738 Query: 63 aacat 67 ||||| Sbjct: 737 aacat 733
>gb|AY054198.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 777 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 718 Query: 63 aacat 67 ||||| Sbjct: 717 aacat 713
>gb|AY052237.1| Arabidopsis thaliana At1g29920/F1N18_80 mRNA, complete cds Length = 1027 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 783 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 724 Query: 63 aacat 67 ||||| Sbjct: 723 aacat 719
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds Length = 999 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 797 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 738 Query: 63 aacat 67 ||||| Sbjct: 737 aacat 733
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 52.0 bits (26), Expect = 7e-04 Identities = 80/99 (80%) Strand = Plus / Minus Query: 2 gaggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatgga 61 ||||||||| | ||||| | |||||||||| |||||| | ||||| || | |||||| Sbjct: 7581096 gaggttctcgacggggccctcgccggtgacgtaggcctggatgaagaaccccagcatgga 7581037 Query: 62 gaacatggnaaggcggccgttcttgatcttnttcacctt 100 |||||||| || || ||||||||||||| |||||||| Sbjct: 7581036 gaacatggccagccgcccgttcttgatctccttcacctt 7580998
>emb|BX815776.1|CNS0AE4K Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS93ZB12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 972 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 769 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 710 Query: 63 aacat 67 ||||| Sbjct: 709 aacat 705
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS89ZA03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 930 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 766 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 707 Query: 63 aacat 67 ||||| Sbjct: 706 aacat 702
>emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 994 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 781 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 722 Query: 63 aacat 67 ||||| Sbjct: 721 aacat 717
>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence, complete sequence Length = 82053 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 677 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 618 Query: 63 aacat 67 ||||| Sbjct: 617 aacat 613
>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete sequence Length = 101075 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 19823 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 19764 Query: 63 aacat 67 ||||| Sbjct: 19763 aacat 19759 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Plus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 16184 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 16243 Query: 63 aacat 67 ||||| Sbjct: 16244 aacat 16248
>gb|AY086905.1| Arabidopsis thaliana clone 29298 mRNA, complete sequence Length = 1041 Score = 52.0 bits (26), Expect = 7e-04 Identities = 55/65 (84%) Strand = Plus / Minus Query: 3 aggttctctagcgggcctttgccggtgacgatggcctgnacaaagaagccaaacatggag 62 |||||||||| ||| || || || ||||||||||| || || ||||| |||||||| ||| Sbjct: 798 aggttctctatcggtcccttaccagtgacgatggcttgaacgaagaatccaaacatagag 739 Query: 63 aacat 67 ||||| Sbjct: 738 aacat 734 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,050,469 Number of Sequences: 3902068 Number of extensions: 1050469 Number of successful extensions: 74797 Number of sequences better than 10.0: 347 Number of HSP's better than 10.0 without gapping: 346 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 74157 Number of HSP's gapped (non-prelim): 625 length of query: 205 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 183 effective length of database: 17,147,199,772 effective search space: 3137937558276 effective search space used: 3137937558276 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)