Clone Name | rbasd13b12 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1... | 50 | 2e-06 | 2 | SC5A1_MOUSE (Q8C3K6) Sodium/glucose cotransporter 1 (Na(+)/gluco... | 28 | 7.4 | 3 | SC5A1_PIG (P26429) Sodium/glucose cotransporter 1 (Na(+)/glucose... | 27 | 9.7 |
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>APX4_ORYSA (Q6ZJJ1) Putative L-ascorbate peroxidase 4 (EC 1.11.1.11)| Length = 291 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/48 (52%), Positives = 27/48 (56%) Frame = -2 Query: 332 FTPRSSGPASTKSDVSTXXXXXXXXXXXXXXXXXXXAGYLYEASKRSK 189 FTPRSSGPASTKSD+ST YLYEASK+SK Sbjct: 244 FTPRSSGPASTKSDLSTGAVLAQSAVGVAVAAAVVIVSYLYEASKKSK 291
>SC5A1_MOUSE (Q8C3K6) Sodium/glucose cotransporter 1 (Na(+)/glucose| cotransporter 1) (High affinity sodium-glucose cotransporter) Length = 665 Score = 27.7 bits (60), Expect = 7.4 Identities = 9/19 (47%), Positives = 14/19 (73%) Frame = +2 Query: 41 PQECMKYFETTVGCSSLEF 97 P+EC KY T VGC+++ + Sbjct: 348 PEECQKYCGTPVGCTNIAY 366
>SC5A1_PIG (P26429) Sodium/glucose cotransporter 1 (Na(+)/glucose| cotransporter 1) (High affinity sodium-glucose cotransporter) (Fragment) Length = 605 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/19 (52%), Positives = 13/19 (68%) Frame = +2 Query: 41 PQECMKYFETTVGCSSLEF 97 P EC KY T VGCS++ + Sbjct: 291 PSECEKYCGTKVGCSNIAY 309 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 38,015,572 Number of Sequences: 219361 Number of extensions: 553257 Number of successful extensions: 1064 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1043 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1064 length of database: 80,573,946 effective HSP length: 86 effective length of database: 61,708,900 effective search space used: 1481013600 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)