Clone Name | rbasd13b10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BRC4_DROME (Q24206) Broad-complex core-protein isoform 6 | 33 | 0.66 | 2 | EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subu... | 31 | 3.3 | 3 | WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region ... | 29 | 9.5 | 4 | LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp | 29 | 9.5 |
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>BRC4_DROME (Q24206) Broad-complex core-protein isoform 6| Length = 880 Score = 33.1 bits (74), Expect = 0.66 Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 2/31 (6%) Frame = +3 Query: 333 PISLTPSVHRRHA--HDLDRRCYAHAHVHVH 419 P+SL PS H+ HA H+L HAH H H Sbjct: 599 PLSLLPSHHQLHATHHELSAAAAHHAHAHAH 629
>EX7L_XANAC (Q8PJW7) Probable exodeoxyribonuclease VII large subunit (EC| 3.1.11.6) (Exonuclease VII large subunit) Length = 445 Score = 30.8 bits (68), Expect = 3.3 Identities = 30/92 (32%), Positives = 36/92 (39%), Gaps = 3/92 (3%) Frame = +3 Query: 261 MQHLSQHSL---LQSCDRCPAPCPIDQPISLTPSVHRRHAHDLDRRCYAHAHVHVHELFL 431 M L QH+L +Q DR P + +HRR D R+ A +HV E Sbjct: 280 MTQLQQHALGNAMQRADRLALRLRAQSPQARLQLLHRRQ-EDAGRQLRARM-MHVLE--- 334 Query: 432 LFEQSRCCASTQEGNQTSQSHLDQTHLDGTSQ 527 R A Q G QSH Q HL G Q Sbjct: 335 -----RLQARVQRGQAQLQSHNPQRHLAGLQQ 361
>WBS14_HUMAN (Q9NP71) Williams-Beuren syndrome chromosome region 14 protein (WS| basic-helix-loop-helix leucine zipper protein) (WS-bHLH) (Mlx interactor) (MLX-interacting protein-like) Length = 852 Score = 29.3 bits (64), Expect = 9.5 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = +3 Query: 234 PKFQVRSDEMQHLSQHSLLQSCDRCPAP 317 P+ S M HLS HS LQ+ + CP P Sbjct: 338 PEVPPASSAMTHLSGHSRLQARNSCPGP 365
>LASP1_DROME (Q8I7C3) LIM and SH3 domain protein Lasp| Length = 657 Score = 29.3 bits (64), Expect = 9.5 Identities = 24/109 (22%), Positives = 42/109 (38%), Gaps = 4/109 (3%) Frame = +3 Query: 189 QQQTTHKTSSNSKPQPKFQVRSDEMQHLSQHSLLQSCDRCPAPCPID----QPISLTPSV 356 QQQ H+ + + Q + + QH QH L Q P P PI ++TP+ Sbjct: 180 QQQLQHQQQQQYQ---QHQQQLQQQQHQHQHYLQQQQQTLPPP-PIQHQQYNTAAITPTY 235 Query: 357 HRRHAHDLDRRCYAHAHVHVHELFLLFEQSRCCASTQEGNQTSQSHLDQ 503 + ++ +H+ + ++Q + Q+ Q Q L Q Sbjct: 236 QQLQQQQQQQQQQRAQQQQLHDPYAHYQQPQALRQQQQQQQQQQQQLLQ 284 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 74,591,446 Number of Sequences: 219361 Number of extensions: 1363614 Number of successful extensions: 4287 Number of sequences better than 10.0: 4 Number of HSP's better than 10.0 without gapping: 4049 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4284 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)