ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd13b09 |
|---|---|
| Clone Library Name | barley_pub |
>PURA_WHEAT (O24396) Adenylosuccinate synthetase, chloroplast precursor (EC| 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) (Fragment) Length = 476 Score = 48.1 bits (113), Expect = 6e-06 Identities = 23/29 (79%), Positives = 23/29 (79%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 RYV RI L GVPV YIGVG GRDALIYK Sbjct: 448 RYVERIEELAGVPVHYIGVGPGRDALIYK 476
>PURA_MAIZE (O24578) Adenylosuccinate synthetase, chloroplast precursor (EC| 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) Length = 484 Score = 47.8 bits (112), Expect = 7e-06 Identities = 23/28 (82%), Positives = 23/28 (82%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV RI LVGVPV YIGVG GRDALIYK Sbjct: 457 YVERIEELVGVPVHYIGVGPGRDALIYK 484
>PURA_ARATH (Q96529) Adenylosuccinate synthetase, chloroplast precursor (EC| 6.3.4.4) (IMP--aspartate ligase) (AdSS) (AMPSase) Length = 490 Score = 47.4 bits (111), Expect = 1e-05 Identities = 21/29 (72%), Positives = 24/29 (82%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 +YV RI LVGVP+ YIG+G GRDALIYK Sbjct: 462 QYVERIEELVGVPIHYIGIGPGRDALIYK 490
>PURA1_METAC (Q8TPJ2) Adenylosuccinate synthetase 1 (EC 6.3.4.4) (IMP--aspartate| ligase 1) (AdSS 1) (AMPSase 1) Length = 424 Score = 35.4 bits (80), Expect = 0.038 Identities = 16/28 (57%), Positives = 20/28 (71%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 Y+ RI LVGVPV+YIGVG R +I + Sbjct: 397 YIKRIEELVGVPVKYIGVGPARSDVIIR 424
>PURA_SCHPO (Q02787) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 434 Score = 34.7 bits (78), Expect = 0.065 Identities = 14/29 (48%), Positives = 20/29 (68%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 +Y+ I VGVP+ +IGVG GRD ++ K Sbjct: 405 KYIEFIEKFVGVPITFIGVGPGRDEMLVK 433
>PURA_DICDI (P21900) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 33.9 bits (76), Expect = 0.11 Identities = 16/26 (61%), Positives = 18/26 (69%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 Y+ RI LVGVP+ YIGVG R LI Sbjct: 396 YIKRIEELVGVPIVYIGVGVERKNLI 421
>PURA_YEAST (P80210) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 31.6 bits (70), Expect = 0.55 Identities = 11/29 (37%), Positives = 21/29 (72%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 +Y+ I VGVPV+++G G R+++++K Sbjct: 401 KYLKYIEDFVGVPVEWVGTGPARESMLHK 429
>PURA_MYCTU (P65880) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV R+ L G PV IGVG GR+ I + Sbjct: 397 YVLRLEQLAGAPVSCIGVGPGREQTIVR 424
>PURA_MYCBO (P65881) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 30.8 bits (68), Expect = 0.94 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV R+ L G PV IGVG GR+ I + Sbjct: 397 YVLRLEQLAGAPVSCIGVGPGREQTIVR 424
>PURA_CORJK (Q4JXT3) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV R+ L G + YIGVG GRD I Sbjct: 396 YVKRLEELSGCRISYIGVGPGRDQTI 421
>PURA_CORDI (Q6NF38) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV R+ L G + YIGVG GRD I Sbjct: 396 YVRRLEELSGCRISYIGVGPGRDQTI 421
>PURA_CORAM (Q9RHX5) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 430 Score = 30.4 bits (67), Expect = 1.2 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV R+ L G + YIGVG GRD I + Sbjct: 396 YVLRLEELSGTRMSYIGVGPGRDQTIVR 423
>PURA_BLOPB (Q494F3) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 30.0 bits (66), Expect = 1.6 Identities = 12/26 (46%), Positives = 16/26 (61%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV RI L+GVP+ + G R A+I Sbjct: 399 YVKRIEELIGVPIHIVSTGSDRSAII 424
>PURA_PROAC (Q6A6A3) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 428 Score = 29.6 bits (65), Expect = 2.1 Identities = 14/23 (60%), Positives = 15/23 (65%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRD 199 YV R+ LVG V IGVG GRD Sbjct: 396 YVRRLEELVGTRVSGIGVGAGRD 418
>PURA_CAEEL (P91134) Probable adenylosuccinate synthetase (EC 6.3.4.4)| (IMP--aspartate ligase) (AdSS) (AMPSase) Length = 434 Score = 29.6 bits (65), Expect = 2.1 Identities = 13/29 (44%), Positives = 19/29 (65%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 +YV I + VP+ YIGVG R++LI + Sbjct: 404 QYVKFIEDFIKVPIVYIGVGAERESLIVR 432
>PURA_COREF (Q8FMB0) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV R+ L G YIGVG GRD I Sbjct: 396 YVRRLEELSGARFSYIGVGPGRDQTI 421
>PURA_CORGL (Q8NM16) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 430 Score = 29.3 bits (64), Expect = 2.7 Identities = 14/26 (53%), Positives = 15/26 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV R+ L G YIGVG GRD I Sbjct: 396 YVRRLEELSGARFSYIGVGPGRDQTI 421
>PURA2_METAC (Q8TIM8) Adenylosuccinate synthetase 2 (EC 6.3.4.4) (IMP--aspartate| ligase 2) (AdSS 2) (AMPSase 2) Length = 424 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 Y+ R+ L+ VP+ YI VG GR+ K Sbjct: 396 YIKRLEELMKVPINYISVGPGREQTFKK 423
>PURA2_PSEHT (Q3IIQ6) Adenylosuccinate synthetase 2 (EC 6.3.4.4) (IMP--aspartate| ligase 2) (AdSS 2) (AMPSase 2) Length = 418 Score = 29.3 bits (64), Expect = 2.7 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 +YV RI L+GVP+ + VG R+ +I + Sbjct: 390 QYVERIEALMGVPITMVSVGPEREQMIIR 418
>PURA_MYCLE (O69595) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 432 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV R+ L G V IGVG GRD I + Sbjct: 397 YVLRLEELAGAQVACIGVGPGRDQTIVR 424
>PURA_DROME (Q9Y0Y2) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 447 Score = 28.9 bits (63), Expect = 3.6 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV + + VPV+++GVG GR+++I Sbjct: 419 YVRLLESELSVPVRWVGVGKGRESII 444
>PURA_CHLCH (Q3APK8) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 434 Score = 28.1 bits (61), Expect = 6.1 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = -3 Query: 270 RYVXRIXXLVGVPVQYIGVGXGRDALIYK 184 RYV + V +PV +I VG GRD +++ Sbjct: 406 RYVDFLEEQVQLPVTFISVGPGRDETVFR 434
>PURA_STRCO (Q9X8P6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV + + G P+ IGVG GRD I Sbjct: 396 YVKALEEMSGAPISAIGVGPGRDETI 421
>PURA_STRAW (Q82ER6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 427 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALI 190 YV + + G P+ IGVG GRD I Sbjct: 396 YVRALEEMSGAPISAIGVGPGRDETI 421
>PURA_NOCFA (Q5YNL6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 429 Score = 27.7 bits (60), Expect = 8.0 Identities = 13/28 (46%), Positives = 16/28 (57%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV R+ L G + IGVG GRD I + Sbjct: 397 YVRRLEELSGARISCIGVGPGRDQTIVR 424
>PURA_CHLTE (Q8KAK6) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 435 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK 184 YV + + VPV +I VG GRD ++K Sbjct: 408 YVNFLEEALEVPVTFISVGPGRDETVFK 435
>PURA_RHOBA (Q7UHW3) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate| ligase) (AdSS) (AMPSase) Length = 437 Score = 27.7 bits (60), Expect = 8.0 Identities = 14/35 (40%), Positives = 19/35 (54%) Frame = -3 Query: 267 YVXRIXXLVGVPVQYIGVGXGRDALIYK*RANSIG 163 YV RI LVG+PV + VG R I+ + +G Sbjct: 402 YVKRIEELVGIPVGVLSVGPDRAQTIFTEESKVMG 436 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 35,457,112 Number of Sequences: 219361 Number of extensions: 536075 Number of successful extensions: 1231 Number of sequences better than 10.0: 27 Number of HSP's better than 10.0 without gapping: 1218 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1231 length of database: 80,573,946 effective HSP length: 66 effective length of database: 66,096,120 effective search space used: 1586306880 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
