ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd13a23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finge... 30 3.2
2BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator 29 4.2
3BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator 29 5.5
4GALT_CLOAB (Q97EZ4) Galactose-1-phosphate uridylyltransferase (E... 28 7.2
5RPP8_ARATH (Q8W4J9) Disease resistance protein RPP8 (Resistance ... 28 9.4

>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)|
          Length = 450

 Score = 29.6 bits (65), Expect = 3.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431
           +NPG SL LL     S +L     Y F+Y D F
Sbjct: 263 VNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTF 295



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>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator|
          Length = 450

 Score = 29.3 bits (64), Expect = 4.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = +3

Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431
           +NPG SL LL     S +L     Y F+Y D+F
Sbjct: 263 VNPGRSLFLLYALKSSPRLGLLYLYLFDYTDSF 295



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>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator|
          Length = 450

 Score = 28.9 bits (63), Expect = 5.5
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431
           +NPG SL LL     S +L     Y F+Y D F
Sbjct: 263 VNPGRSLFLLYALKSSPRLGLLYLYLFDYTDCF 295



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>GALT_CLOAB (Q97EZ4) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)|
           (Gal-1-P uridylyltransferase)
           (UDP-glucose--hexose-1-phosphate uridylyltransferase)
          Length = 497

 Score = 28.5 bits (62), Expect = 7.2
 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 8/90 (8%)
 Frame = +3

Query: 93  ISRANIYSFLSYLLIYKLTK*DNFFGLFRHPTQ*SVRIL---FNKILW-----NHRFCRS 248
           I++A +    SY       + + F+G   HP + ++RI+    NK  W      + +   
Sbjct: 159 IAKAKLSKSTSYPKCLLCKENEGFYGNINHPARQTLRIIPLELNKSKWFLQYSPYTYYNE 218

Query: 249 HCFSLNG*V*IPQRSFQKISFRVNFLXFIN 338
           HC  LN    IP +   +I+F  N L FI+
Sbjct: 219 HCIILNN-EHIPMK-ISRITFE-NLLSFID 245



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>RPP8_ARATH (Q8W4J9) Disease resistance protein RPP8 (Resistance to Peronospora|
           parasitica protein 8)
          Length = 908

 Score = 28.1 bits (61), Expect = 9.4
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = -3

Query: 265 FKEKQWERQNL*FHRILLKRILTLHWV 185
           F+E  W R    FH + L R+L L WV
Sbjct: 560 FEEDYWIRSASVFHNLTLLRVLDLSWV 586


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,340,324
Number of Sequences: 219361
Number of extensions: 870904
Number of successful extensions: 1412
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1412
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2453576370
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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