Clone Name | rbasd13a23 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finge... | 30 | 3.2 | 2 | BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator | 29 | 4.2 | 3 | BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator | 29 | 5.5 | 4 | GALT_CLOAB (Q97EZ4) Galactose-1-phosphate uridylyltransferase (E... | 28 | 7.2 | 5 | RPP8_ARATH (Q8W4J9) Disease resistance protein RPP8 (Resistance ... | 28 | 9.4 |
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>BFAR_HUMAN (Q9NZS9) Bifunctional apoptosis regulator (RING finger protein 47)| Length = 450 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431 +NPG SL LL S +L Y F+Y D F Sbjct: 263 VNPGRSLFLLYALKSSPRLSLLYLYLFDYTDTF 295
>BFAR_RAT (Q5PQN2) Bifunctional apoptosis regulator| Length = 450 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = +3 Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431 +NPG SL LL S +L Y F+Y D+F Sbjct: 263 VNPGRSLFLLYALKSSPRLGLLYLYLFDYTDSF 295
>BFAR_MOUSE (Q8R079) Bifunctional apoptosis regulator| Length = 450 Score = 28.9 bits (63), Expect = 5.5 Identities = 14/33 (42%), Positives = 17/33 (51%) Frame = +3 Query: 333 INPGGSLLLLKICXXSFKLQXFIXYXFNYIDAF 431 +NPG SL LL S +L Y F+Y D F Sbjct: 263 VNPGRSLFLLYALKSSPRLGLLYLYLFDYTDCF 295
>GALT_CLOAB (Q97EZ4) Galactose-1-phosphate uridylyltransferase (EC 2.7.7.12)| (Gal-1-P uridylyltransferase) (UDP-glucose--hexose-1-phosphate uridylyltransferase) Length = 497 Score = 28.5 bits (62), Expect = 7.2 Identities = 25/90 (27%), Positives = 41/90 (45%), Gaps = 8/90 (8%) Frame = +3 Query: 93 ISRANIYSFLSYLLIYKLTK*DNFFGLFRHPTQ*SVRIL---FNKILW-----NHRFCRS 248 I++A + SY + + F+G HP + ++RI+ NK W + + Sbjct: 159 IAKAKLSKSTSYPKCLLCKENEGFYGNINHPARQTLRIIPLELNKSKWFLQYSPYTYYNE 218 Query: 249 HCFSLNG*V*IPQRSFQKISFRVNFLXFIN 338 HC LN IP + +I+F N L FI+ Sbjct: 219 HCIILNN-EHIPMK-ISRITFE-NLLSFID 245
>RPP8_ARATH (Q8W4J9) Disease resistance protein RPP8 (Resistance to Peronospora| parasitica protein 8) Length = 908 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/27 (44%), Positives = 15/27 (55%) Frame = -3 Query: 265 FKEKQWERQNL*FHRILLKRILTLHWV 185 F+E W R FH + L R+L L WV Sbjct: 560 FEEDYWIRSASVFHNLTLLRVLDLSWV 586 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 48,340,324 Number of Sequences: 219361 Number of extensions: 870904 Number of successful extensions: 1412 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1407 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1412 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)