ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd13a11 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AB042240.3| Triticum aestivum chloroplast DNA, complete genome Length = 134545 Score = 1037 bits (523), Expect = 0.0 Identities = 610/637 (95%), Gaps = 6/637 (0%) Strand = Plus / Plus Query: 1 aatataatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatat 60 |||||||||||||||| |||||| ||| ||||||||||||| ||||||||||||| |||| Sbjct: 78133 aatataatatatagtcaaaaaag-aag-atctagaatatat-ccagatgtgtgtgtatat 78189 Query: 61 ttatctaaattctatatttatagataataatgtagtccttctaaaaaatatccttatttt 120 |||||||||||||||||||||||||||| ||| ||||||| ||||| ||||||||||| Sbjct: 78190 ttatctaaattctatatttatagataat---gtaatccttcttaaaaaaatccttatttt 78246 Query: 121 tactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatt 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78247 gactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatt 78306 Query: 181 tactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct: 78307 tactctttcctgtcttatttgttaatttataaacttaccaaataagacaatttttttggt 78366 Query: 241 ttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaat 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78367 ttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaat 78426 Query: 301 cataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgg 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78427 cataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgg 78486 Query: 361 agcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctct 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78487 agcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctct 78546 Query: 421 ttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattag 480 |||||||||||| ||||||||||||||| |||||||||| ||||||| ||||||||||| Sbjct: 78547 ttattattgctttaaatttgtagttcttgtttcaagttaaaatttttaattctctattat 78606 Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 78607 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacat 78666 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 78667 agtggaatcctatatcttatttatttcctcttccttctttctatcatccctccctttatc 78726 Query: 601 cacatccctttagttttgcttcacaacctagaatccc 637 ||||||||||||||||||||||||||||||||||||| Sbjct: 78727 cacatccctttagttttgcttcacaacctagaatccc 78763
>gb|DQ113928.1| Calamagrostis muiriana isolate B1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 835 bits (421), Expect = 0.0 Identities = 562/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatagatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | ||||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttacgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113934.1| Calamagrostis breweri isolate X17 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113933.1| Calamagrostis breweri isolate RMP0198 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113932.1| Calamagrostis breweri isolate BW8259 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113931.1| Calamagrostis breweri isolate RMP0007 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113930.1| Calamagrostis muiriana isolate B4 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113929.1| Calamagrostis muiriana isolate B3 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataatggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113927.1| Calamagrostis muiriana isolate A7 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|DQ113926.1| Calamagrostis muiriana isolate A1 ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 796 Score = 819 bits (413), Expect = 0.0 Identities = 560/608 (92%), Gaps = 5/608 (0%) Strand = Plus / Plus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattt-atagataa 87 ||||||||||||| | ||||||||||| |||||||||||||||||||||| || ||| | Sbjct: 33 atctagaatatat-ctagatgtgtgtgtctatttatctaaattctatattttatggatga 91 Query: 88 taatgtagtccttctaaaaaatatccttatttttactcttattgaatcgcggtaaagtat 147 | ||| ||||| |||||||||||||||||||||||||||||||| |||||||||| Sbjct: 92 t---gtaatccttaaaaaaaatatccttatttttactcttattgaataaaggtaaagtat 148 Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 149 tctaattcaaaaagtatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 208 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| ||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 209 tataaccttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaagt 268 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 269 attaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 328 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||||||||||||||||||||| || ||| ||||||||||||||||||||||||||||| Sbjct: 329 tccttgaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtt 388 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 |||||||||||||||||||||| |||||||||||||||||||||| |||||| ||||||| Sbjct: 389 aattttctcagttttattaaccagggcggctctttattattgctttaaatttctagttct 448 Query: 448 tctttcaagttacaatttttcattctctattagttttattatattgatgctttttcacat 507 | |||||||||| |||| | ||||||||||| |||||||||||||||||||| |||||| Sbjct: 449 tgtttcaagttatgatttctaattctctattatttttattatattgatgctttatcacat 508 Query: 508 tgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttc 567 ||| |||||||||| ||||||||||||||||| | |||||| |||||||||| ||| ||| Sbjct: 509 tgctttttatgatgcaattcatagaccatacatattggaatcctatatcttacttaattc 568 Query: 568 ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaac 627 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 569 ctcttccttctttctatcatccctccctttatccacatccctttagttttccttcacaac 628 Query: 628 ctagaatc 635 |||||||| Sbjct: 629 ctagaatc 636
>gb|AY847072.1| Melica altissima ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1139 Score = 779 bits (393), Expect = 0.0 Identities = 559/611 (91%), Gaps = 8/611 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| |||||||||| || |||||||||| ||||||| |||||||||||| Sbjct: 777 atctagaatatat-ccagatgtgtatgtctatttatctatattctat-tttatagataat 720 Query: 89 aatgtagtccttctaaaaaatatcc--ttatttttactcttattgaatcgcggtaaagta 146 ||| ||||||| ||||| ||| ||||||||||||||||||||||||||||||||| Sbjct: 719 ---gtaatccttcttaaaaaaatctatttatttttactcttattgaatcgcggtaaagta 663 Query: 147 ttctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaat 206 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 662 ttctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatttgttaat 603 Query: 207 ttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaag 266 |||||| ||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 602 ttataatcttaccaaataagacaatttttttggtttgttccgccatcccacccaatgaag 543 Query: 267 tgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgctt 326 | |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 542 tattaggattcttttcaataaaatcctatggagtcataggttctgtcgttcccactgctt 483 Query: 327 ctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt 386 |||| |||||||||||||||||||||||||| ||||||||| ||||| | ||||||||| Sbjct: 482 ctccctgaatggttaggtctgaatcccgcaatggagcttccttaaaatgtttttccgagt 423 Query: 387 taattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttc 446 ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| ||| Sbjct: 422 taattttctcagttttattaaccgcggcggctctttattattgctttaaatttgtacttc 363 Query: 447 ttctttcaagttacaatttttcattctctattagttttattatattgatgctttttcaca 506 || ||| ||||||| |||| ||||||| ||| |||||||||||||||||||| ||||| Sbjct: 362 ttattttaagttacgatttcgaattctctcttatttttattatattgatgctttatcaca 303 Query: 507 ttgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttattt 566 ||||||||||||||| ||||||||||||||||| | ||||| ||||||||||| || ||| Sbjct: 302 ttgccttttatgatgcaattcatagaccatacatattggaactctatatcttactt-ttt 244 Query: 567 cctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaa 626 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 243 tctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcacaa 184 Query: 627 cctagaatccc 637 ||||||||||| Sbjct: 183 cctagaatccc 173
>gb|AY847071.1| Glyceria striata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 763 bits (385), Expect = 0.0 Identities = 511/553 (92%), Gaps = 3/553 (0%) Strand = Plus / Minus Query: 87 ataatgtagtccttct--aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| Sbjct: 725 ataatgtaatccttcttaaaaaaatatctttatttttactcttattgaatcgcggtaaag 666 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 665 tattctaattcaataagtatttcgcgggcgaatatttactctttcctgtcttatttgtta 606 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| |||||||||||||| || ||||||||||||||||||||||||||| Sbjct: 605 atttataagcttaccaaataagagaatttttttggtttgttccgccatcccacccaatga 546 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 545 agtattaggattctttttaataaaatcctatggagtcataggttctgtcgttcccactgc 486 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||| |||||||||||||||||||||||||| ||||||||| |||||| | ||||||| Sbjct: 485 ttctccctgaatggttaggtctgaatcccgcaatggagcttcctaaaaatatgtttccga 426 Query: 385 gttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagt 444 ||||||||||||||||||| |||| ||||||||||||||||||||| |||||||||| Sbjct: 425 gttaattttctcagttttactaactgcggcggctctttattattgctttgaatttgtagt 366 Query: 445 tcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttca 504 |||| ||| ||||||| |||| ||||||| ||| |||||||||||||||||||| ||| Sbjct: 365 tcttattttaagttacgatttcgaattctctcttatttttattatattgatgctttatca 306 Query: 505 cattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttat 564 ||||||||||||||||| ||||||||||||||||| | ||||||||||||||||| |||| Sbjct: 305 cattgccttttatgatgcaattcatagaccatacatattggaattctatatcttacttat 246 Query: 565 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 624 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 245 tt-ctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 187 Query: 625 aacctagaatccc 637 ||||||||||||| Sbjct: 186 aacctagaatccc 174
>gb|AY847115.1| Streptogyna americana ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1160 Score = 757 bits (382), Expect = 0.0 Identities = 557/613 (90%), Gaps = 11/613 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||| |||||||||||| Sbjct: 815 atctagaatatat-ctagatgtgtgtgtttatttatctatattctat-tttatagataat 758 Query: 89 aatgtagtccttct-----aaaaaatatccttatttttactcttattgaatcgcggtaaa 143 ||| || |||| ||||||| ||||||||||||||||||||||||||||||||| Sbjct: 757 ---gtaatctttcttaaaaaaaaaatctccttatttttactcttattgaatcgcggtaaa 701 Query: 144 gtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtt 203 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 700 gtattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtt 641 Query: 204 aatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatg 263 |||| |||| ||||||||||||| ||| |||||||||||||||||||||||||| Sbjct: 640 aattcataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatg 581 Query: 264 aagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactg 323 |||| |||||||||||||||||||||||||||| | |||||||||||||||||||||||| Sbjct: 580 aagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactg 521 Query: 324 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 383 ||||||||| ||||||||||| |||||||||||| ||||||||||||||||||||||||| Sbjct: 520 cttctcctttaatggttaggtttgaatcccgcaatggagcttccaaaaaatttctttccg 461 Query: 384 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 443 ||| |||||| |||||||||||||||||||| |||||||||||||||||||||||| || Sbjct: 460 agtcaattttatcagttttattaacccgggccgctctttattattgcttaaaatttttat 401 Query: 444 ttcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttc 503 ||||| ||||||||||| |||| ||||||| ||| |||||||||||||||||||| || Sbjct: 400 ttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctttatc 341 Query: 504 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 563 |||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||| Sbjct: 340 acattgccttttatgatgtaattcatagaccatacatattggaatcctatatctttctta 281 Query: 564 tttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttca 623 ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 280 -ttcctcttccttctttctatcatccctccttttatccacatccctttagttttgcttca 222 Query: 624 caacctagaatcc 636 |||| |||||||| Sbjct: 221 caacttagaatcc 209
>gb|AY847092.1| Arundoclaytonia dissimilis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 745 bits (376), Expect = 0.0 Identities = 555/612 (90%), Gaps = 10/612 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||| |||||| ||| Sbjct: 711 atctagaatatat-ctagatgtgtgtgtctatttatctatattctat-tttata---aat 657 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 656 aatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgcggtaaag 597 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 596 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 537 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||| ||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 536 atttgtaaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 477 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| ||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 476 agtattaggattcttttcaataaaatcctatccattcataggttctgtcgttcccactac 417 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| ||||||||||||||||| || ||| |||||||||||||||||||||||||| Sbjct: 416 ttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctttccga 357 Query: 385 gttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagt 444 || ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| | Sbjct: 356 gtcaattttctcagttttcttaacccgggccgctctttattattgcttaaaatttgtatt 297 Query: 445 tcttctttcaagttacaatttttcattctctattagttttattatattgatgctttttca 504 |||| |||| |||||| |||| ||||||| ||| |||||||||||||||||||| ||| Sbjct: 296 tcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctttatca 237 Query: 505 cattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttat 564 ||||||||||||||||||||||||||||||||||| | |||||| ||||||||| ||| Sbjct: 236 cattgccttttatgatgtaattcatagaccatacatattggaatcctatatctttctta- 178 Query: 565 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 624 ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 177 ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgcttcac 118 Query: 625 aacctagaatcc 636 |||||||||||| Sbjct: 117 aacctagaatcc 106
>gb|AY912189.1| Arthrostylidium ecuadorense ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 739 bits (373), Expect = 0.0 Identities = 557/617 (90%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||| ||| Sbjct: 838 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttata---aat 783 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 782 aatgtaatccttcttttaaaaaaatctccttatttttactcttattgaatcgcggtaaag 723 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 662 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 603 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| ||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 602 aatgaagtattaggattcttttcaataaaatcctatccattcataggttctgtcgttccc 543 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 542 actacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctt 483 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 482 tccgagtcaattttctcagttttcttaacccgggccgctctttattattgcttaaaattt 423 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 gtatttcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 303 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 244 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 243 ttcacaacctagaatcc 227
>gb|AY912212.1| Sirochloa parvifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1217 Score = 731 bits (369), Expect = 0.0 Identities = 556/617 (90%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 831 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 773 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 772 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 716 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 656 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 655 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 596 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 595 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 536 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 535 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 476 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 475 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 416 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 415 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 356 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 355 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 296 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 295 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 237 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 236 ttcacaacctagaatcc 220
>gb|AY912199.1| Cephalostachyum pergracile ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1226 Score = 731 bits (369), Expect = 0.0 Identities = 556/617 (90%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 840 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 782 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 781 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 725 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattttaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 365 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 364 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 305 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 304 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 246 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 245 ttcacaacctagaatcc 229
>gb|AY912193.1| Oxytenanthera abyssinica ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1222 Score = 731 bits (369), Expect = 0.0 Identities = 556/617 (90%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||||||| |||||| Sbjct: 836 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatggataat 778 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 721 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 661 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 600 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 541 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 481 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 421 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 420 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 361 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 360 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 301 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 300 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 242 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 241 ttcacaacctagaatcc 225
>gb|AY912192.1| Bambusa vulgaris ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 731 bits (369), Expect = 0.0 Identities = 556/617 (90%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||||||| |||||| Sbjct: 841 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatggataat 783 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 782 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 726 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 725 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 666 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 665 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 606 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 605 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 546 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 545 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 486 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 485 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 426 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 425 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 366 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 365 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 306 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 305 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 247 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 246 ttcacaacctagaatcc 230
>gb|AY912213.1| Valiha diffusa ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1163 Score = 724 bits (365), Expect = 0.0 Identities = 555/617 (89%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| | |||||||||||||||||||| Sbjct: 830 atctagaatatat-ctagatgtgtgtgtctatttatccatattctatatttatagataat 772 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 771 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 715 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 714 tattctaattcaataaagatttcgcgggcgaatattaactctttcctgtcttatttgtta 655 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 654 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 595 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 594 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 535 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 534 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 475 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 474 tccgagtcaattttctcagttttattaacccgggccgctctttattattgtttaaaattt 415 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 414 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 355 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 354 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 295 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 294 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 236 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 235 ttcacaacctagaatcc 219
>gb|AY912202.1| Cathariostachys madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1085 Score = 724 bits (365), Expect = 0.0 Identities = 555/617 (89%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 831 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 773 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 772 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 716 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 715 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 656 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | |||| |||||||| ||| |||||||||||||||||||||| Sbjct: 655 atttatattataaccttatcaaataaggcaattattttggtttgttccgccatcccaccc 596 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 595 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 536 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 535 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 476 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 475 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 416 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 415 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 356 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 355 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 296 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 295 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 237 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 236 ttcacaacctagaatcc 220
>gb|AY912208.1| Nastus elegantissimus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1224 Score = 716 bits (361), Expect = 0.0 Identities = 554/617 (89%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 839 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 781 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 780 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 724 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 664 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 663 atttatattaaaaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 604 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| ||||||||||||||||||||||||| || | |||||||||||||||||||| Sbjct: 603 aatgaagtattaggattcttttcaataaaatcctgtgcagtcataggttctgtcgttccc 544 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| |||||| |||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttatcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 245 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 244 ttcacaacctagaatcc 228
>gb|AY912207.1| Nastus borbonicus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1219 Score = 716 bits (361), Expect = 0.0 Identities = 554/617 (89%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||| ||||||||||||||| Sbjct: 840 atctagaatatat-ctagatgtgtgtgtctatttatctatattccatatttatagataat 782 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 781 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 725 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||| ||||||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttaatatattgatgctt 365 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 364 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 305 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 304 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 246 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 245 ttcacaacctagaatcc 229
>gb|AY912216.1| Streptogyna americana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1172 Score = 714 bits (360), Expect = 0.0 Identities = 558/623 (89%), Gaps = 20/623 (3%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 827 atctagaatatat-ctagatgtgtgtgtttatttatctatattctatatttatagata-- 771 Query: 89 aatgtagtccttct-----aaaaaatatccttattttta-----ctctt-----attgaa 133 ||||| || |||| ||||||| |||||||||||| ||||| |||||| Sbjct: 770 -atgtaatctttcttaaaaaaaaaatctccttatttttattttactcttattgaattgaa 712 Query: 134 tcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgt 193 ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct: 711 tcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgt 652 Query: 194 cttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatc 253 |||||||||||||| |||| ||||||||||||| ||| |||||||||||||||| Sbjct: 651 cttatttgttaattcataaccttaccaaataaggcaatttttttggtttgttccgccatc 592 Query: 254 ccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtc 313 |||||||||||||| |||||||||||||||||||||||||||| | |||||||||||||| Sbjct: 591 ccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtc 532 Query: 314 gttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaa 373 ||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||| Sbjct: 531 gttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttccaaaaaa 472 Query: 374 tttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctta 433 ||||||||||||| |||||| |||||||||||||||||||| |||||||||||||||||| Sbjct: 471 tttctttccgagtcaattttatcagttttattaacccgggccgctctttattattgctta 412 Query: 434 aaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatattg 493 |||||| || ||||| ||||||||||| |||| ||||||| ||| ||||||||||||| Sbjct: 411 aaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttattatattg 352 Query: 494 atgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctat 553 ||||||| |||||||||||||||||||||||||||||||||||||| | |||||| |||| Sbjct: 351 atgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctat 292 Query: 554 atcttatttatttcctcttccttctttctatcatccctccctttatccacatccctttag 613 ||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 291 atctttctta-ttcctcttccttctttctatcatccctccttttatccacatccctttag 233 Query: 614 ttttgcttcacaacctagaatcc 636 |||||||||||||| |||||||| Sbjct: 232 ttttgcttcacaacttagaatcc 210
>gb|AY912211.1| Perrierbambus madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1214 Score = 710 bits (358), Expect = 0.0 Identities = 556/621 (89%), Gaps = 15/621 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||||||||||| || Sbjct: 829 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagattat 771 Query: 89 a----atgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggt 140 | ||||| || |||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 770 agataatgtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggt 711 Query: 141 aaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttattt 200 |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| Sbjct: 710 aaagtattctaattcaataaagatttcccgggcgaatatttactctttcctgtcttattt 651 Query: 201 gttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatccc 255 ||||||||||| | ||||||||||||| ||| |||||||||||||||||| Sbjct: 650 gttaatttatattataaccttaccaaataaggcaattattttggtttgttccgccatccc 591 Query: 256 acccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgt 315 |||||||||||| |||||||||||||||||||||||||||| | |||||||||||||||| Sbjct: 590 acccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgt 531 Query: 316 tcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatt 375 ||||||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||| Sbjct: 530 tcccactacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatt 471 Query: 376 tctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaa 435 ||||||||||| ||||||||||||||||||||||||||| ||||||||||||| | ||| Sbjct: 470 tctttccgagtcaattttctcagttttattaacccgggccgctctttattatttttaaaa 411 Query: 436 atttgtagttcttctttcaagttacaatttttcattctctattagttttattatattgat 495 ||||||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||| Sbjct: 410 atttgtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgat 351 Query: 496 gctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatat 555 ||||| ||||||||| ||||||||||||| |||||||||||||| | |||||| |||||| Sbjct: 350 gctttatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatat 291 Query: 556 cttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagtt 615 ||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||| Sbjct: 290 ctttctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagtt 232 Query: 616 ttgcttcacaacctagaatcc 636 ||||||||||||||||||||| Sbjct: 231 ttgcttcacaacctagaatcc 211
>gb|AF133469.1|AF133469 Nastus elatus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 710 bits (358), Expect = 0.0 Identities = 554/617 (89%), Gaps = 16/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 860 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 804 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 803 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 747 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 746 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 687 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 686 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 627 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 626 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 567 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 566 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 507 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 506 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 447 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 446 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 387 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 386 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 327 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 326 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 268 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 267 ttcacaacctagaatcc 251
>gb|AF133461.1|AF133461 Buergersiochloa bambusoides ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1216 Score = 710 bits (358), Expect = 0.0 Identities = 537/593 (90%), Gaps = 7/593 (1%) Strand = Plus / Minus Query: 45 agatgtgtgtggatatttatctaaattctatatttatagataataatgtagtccttctaa 104 ||||||||||| |||||||||| ||||||||||||||||| |||||| | | || Sbjct: 831 agatgtgtgtgtctatttatctatattctatatttatagat---aatgtatta-taaaaa 776 Query: 105 aaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaat 164 ||||| |||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 775 aaaatctccttatttt-actcttattgaatcgcggtaaagtattctaattcaataaggat 717 Query: 165 ttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaata 224 |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct: 716 ttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaata 657 Query: 225 agacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaa 284 || ||| |||||||||||||||||||||||||||||| |||| ||||||||||| Sbjct: 656 aggcaatttttttggtttgttccgccatcccacccaatgaagtattagaattcttttcaa 597 Query: 285 taaaa-tcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttagg 343 |||| ||||||| | ||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 596 aaaaaatcctatgtagtcataggttctgtcgttcccactacttctcctttaatggttagg 537 Query: 344 tctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttta 403 |||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 536 tctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttta 477 Query: 404 ttaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaat 463 |||||||| || ||||||||||||||||| ||||||||| ||||| |||||||||||||| Sbjct: 476 ttaacccgagctgctctttattattgctttaaatttgtatttcttgtttcaagttacaat 417 Query: 464 ttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgta 523 || ||||||| ||| |||||||||||||||||||| | |||||||||||||||||||| Sbjct: 416 ttcgaattctctgttatttttattatattgatgctttattacattgccttttatgatgta 357 Query: 524 attcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttcta 583 | |||||||||||||| | |||||| ||||||||| ||| ||||||||||||||||||| Sbjct: 356 actcatagaccatacatattggaatcctatatctttctta-ttcctcttccttctttcta 298 Query: 584 tcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||||| ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 297 tcatccctccttttatccacatccctttagttttgcttcacaacgtagaatcc 245
>gb|U54746.1|NEU54746 Nastus elatus ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1071 Score = 710 bits (358), Expect = 0.0 Identities = 554/617 (89%), Gaps = 16/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 837 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 781 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 780 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 724 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 723 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 664 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 663 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 604 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 603 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 544 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 245 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 244 ttcacaacctagaatcc 228
>gb|AY912203.1| Decaryochloa diadelpha ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1173 Score = 708 bits (357), Expect = 0.0 Identities = 540/601 (89%), Gaps = 13/601 (2%) Strand = Plus / Minus Query: 45 agatgtgtgtggatatttatctaaattctatatttatagataataatgtagtccttct-- 102 ||||||||||| |||||||||| |||||||||||||||||||| ||| || |||| Sbjct: 823 agatgtgtgtgtctatttatctatattctatatttatagataat---gtaatctttctta 767 Query: 103 --aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataa 160 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 766 acaaaaaatctccttatttttactcttattgaatcgcggtaaagtattctaattcaataa 707 Query: 161 gaatttcgcgggcgaatatttactctttcctgtcttatttgttaattt-----ataaact 215 |||||||||||||||||| ||||||||||||||||||||||||||| |||| || Sbjct: 706 agatttcgcgggcgaatattgactctttcctgtcttatttgttaatttttattataacct 647 Query: 216 taccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggat 275 ||||||||||| ||| |||||||||||||||||||||||||||||| ||||||| Sbjct: 646 taccaaataaggcaattattttggtttgttccgccatcccacccaatgaagtattaggat 587 Query: 276 tcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaa 335 ||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| || Sbjct: 586 tcttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaa 527 Query: 336 tggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttct 395 |||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 526 tggttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttct 467 Query: 396 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaa 455 ||||||||||||||||||| |||||||||||||| || |||||||| ||||| |||||| Sbjct: 466 cagttttattaacccgggccgctctttattattgttttcaatttgtatttcttgtttcaa 407 Query: 456 gttacaatttttcattctctattagttttattatattgatgctttttcacattgcctttt 515 ||||| |||| ||||||| ||| |||||||||||||||||||| ||||||||| |||| Sbjct: 406 gttacgatttcgaattctctgttatttttattatattgatgctttatcacattgcttttt 347 Query: 516 atgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcct 575 ||||||||| |||||||||||||| | |||||| ||||||||| ||| ||||||||| | Sbjct: 346 atgatgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctt 288 Query: 576 tctttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 287 tctttctatcatccctccttttatccacatccctttagttttgcttcacaacctagaatc 228 Query: 636 c 636 | Sbjct: 227 c 227
>gb|AF133487.1|AF133487 Puelia olyriformis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1217 Score = 702 bits (354), Expect = 0.0 Identities = 485/531 (91%), Gaps = 5/531 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| Sbjct: 776 tccttatttttactcttattgaatcgcggtaaagtattctaatccaataaagatttcgcg 717 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||| |||| |||||||||||| | | Sbjct: 716 ggcgaatatttactctttcctgtcttatttgttaattcataaccttaccaaataaagcta 657 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 656 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 597 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 596 cctatgcagtcataggttctgtcgttcccactgcttctcctttaatggttaggtctgaat 537 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 ||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 536 cccgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 477 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 |||| ||||||||||||||||| |||||| || ||||| ||||||||||| |||| || Sbjct: 476 gggccgctctttattattgctttaaatttttatttcttgtttcaagttacgatttcgaat 417 Query: 471 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 530 |||| ||| |||||||||||||||||||| ||||||||||||||||||| ||||||||| Sbjct: 416 tctcagttatttttattatattgatgctttatcacattgccttttatgatataattcata 357 Query: 531 gaccatacacagtggaattctatatcttatttat-----ttcctcttccttctttctatc 585 ||||||||| | |||||| ||||||||| |||| ||||||||||||||||||||| Sbjct: 356 gaccatacatattggaatcctatatctttcttattcctcttcctcttccttctttctatc 297 Query: 586 atccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||| |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 296 atccctccttttatccacatccctttatttttgcttcacaacctagaatcc 246
>gb|AF133471.1|AF133471 Glaziophyton mirabile ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 702 bits (354), Expect = 0.0 Identities = 554/617 (89%), Gaps = 17/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 857 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 801 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| |||||||||||||||||||||| Sbjct: 800 --tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgcggtaaag 744 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 743 tattctaattcaataaggatttcgcgggcgaatatttactctttcctgtcttatttgtta 684 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 683 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 624 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 623 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 564 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| ||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 563 actacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaaatttctt 504 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 503 tccgagtcaattttctcagttttattaacccgggccgctctttattattgcttaaaattt 444 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| ||||||||| Sbjct: 443 gtatttcttgtttcgagttacga-tttcaattctctgttatttttattattttgatgctt 385 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 384 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 325 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 324 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 266 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 265 ttcacaacctagaatcc 249
>gb|AF133470.1|AF133470 Bambusa longispiculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1206 Score = 702 bits (354), Expect = 0.0 Identities = 553/617 (89%), Gaps = 16/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 855 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatggataa- 798 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||| ||||||||||||||||||| ||| Sbjct: 797 ---gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggttaag 742 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 741 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 682 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 681 atttatattataaccttaccaaataagacaatttttttggtttgttccgccatcccaccc 622 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 621 aatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgtcgttccc 562 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 561 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 502 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 501 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 442 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 441 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 382 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 381 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 322 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 321 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 263 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 262 ttcacaacctagaatcc 246
>gb|U54748.1|GMU54748 Glaziophyton mirabile ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1068 Score = 702 bits (354), Expect = 0.0 Identities = 554/617 (89%), Gaps = 17/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 834 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 778 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| |||||||||||||||||||||| Sbjct: 777 --tgtaatctttcttaaaaaaaaatctccttattttg-ctcttattgaatcgcggtaaag 721 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaggatttcgcgggcgaatatttactctttcctgtcttatttgtta 661 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 600 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 541 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| ||||||||||||| ||| || ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtcttaattccacaatggagcttccaaaaaatttctt 481 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggccgctctttattattgcttaaaattt 421 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| |||| |||||| | ||| ||||||| ||| ||||||||| ||||||||| Sbjct: 420 gtatttcttgtttcgagttacga-tttcaattctctgttatttttattattttgatgctt 362 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 361 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 302 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 301 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 243 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 242 ttcacaacctagaatcc 226
>gb|U54745.1|BLU54745 Bambusa longispiculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 702 bits (354), Expect = 0.0 Identities = 553/617 (89%), Gaps = 16/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||||||| ||||| Sbjct: 832 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatggataa- 775 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||| ||||||||||||||||||| ||| Sbjct: 774 ---gtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggttaag 719 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 718 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 659 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||||||| |||||||||||||||||||||| Sbjct: 658 atttatattataaccttaccaaataagacaatttttttggtttgttccgccatcccaccc 599 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| ||||||||||||||||| |||||||||| | |||||||||||||||||||| Sbjct: 598 aatgaagtattaggattcttttcaattaaatcctatgcagtcataggttctgtcgttccc 539 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 538 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 479 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 478 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 419 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 418 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 359 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 358 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 299 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 298 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 240 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 239 ttcacaacctagaatcc 223
>gb|AF133465.1|AF133465 Arundinaria gigantea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 700 bits (353), Expect = 0.0 Identities = 553/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 860 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 746 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 506 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 267 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 266 ttcacaacctagaatcc 250
>gb|U54742.1|AGU54742 Arundinaria gigantea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 700 bits (353), Expect = 0.0 Identities = 553/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 837 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 723 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 483 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 244 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 243 ttcacaacctagaatcc 227
>gb|AF133460.1|AF133460 Streptogyna americana ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1228 Score = 698 bits (352), Expect = 0.0 Identities = 469/509 (92%), Gaps = 1/509 (0%) Strand = Plus / Minus Query: 128 attgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctt 187 ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 757 attgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactctt 698 Query: 188 tcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttcc 247 |||||||||||||||||||| |||| ||||||||||||| ||| |||||||||| Sbjct: 697 tcctgtcttatttgttaattcataaccttaccaaataagccaatttttttggtttgttcc 638 Query: 248 gccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggt 307 |||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||| Sbjct: 637 gccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggt 578 Query: 308 tctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttcc 367 ||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||| Sbjct: 577 tctgtcgttcccactgcttctcctttaatggttaggtttgaatcccgcaatggagcttcc 518 Query: 368 aaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttattat 427 ||||||||||||||||||| |||||| |||||||||||||||||||| |||||||||||| Sbjct: 517 aaaaaatttctttccgagtcaattttatcagttttattaacccgggccgctctttattat 458 Query: 428 tgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttttatt 487 |||||||||||| || ||||| ||||||||||| |||| ||||||| ||| |||| || Sbjct: 457 tgcttaaaatttttatttcttgtttcaagttacgatttcgaattctctgttatttttttt 398 Query: 488 atattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaa 547 ||||||||||||| |||||||||||||||||||||||||||||||||||||| | ||||| Sbjct: 397 atattgatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaa 338 Query: 548 ttctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatcc 607 | ||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 337 tcctatatctttctta-ttcctcttccttctttctatcatccctccttttatccacatcc 279 Query: 608 ctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||| |||||||| Sbjct: 278 ctttagttttgcttcacaacttagaatcc 250 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Minus Query: 45 agatgtgtgtggatatttatctaaattctatattta 80 ||||||||||| |||||||||| |||||||||||| Sbjct: 848 agatgtgtgtgtttatttatctatattctatattta 813
>gb|AY912200.1| Schizostachyum brachycladum ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1227 Score = 696 bits (351), Expect = 0.0 Identities = 552/617 (89%), Gaps = 12/617 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| ||||||||| |||| | | | Sbjct: 841 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatatatataga-t 784 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 783 aatgtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 724 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| || Sbjct: 723 tattttaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgcta 664 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| || ||||||||||||||||||| Sbjct: 663 atttatattataaccttaccaaataaggcaatttttttgggttgttccgccatcccaccc 604 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| ||| |||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 603 aatgaagtattatgattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 544 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 543 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 484 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 483 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 424 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 423 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 364 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 363 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 304 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 303 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 245 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 244 ttcacaacctagaatcc 228
>gb|AY912214.1| Temburongia simplex ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1075 Score = 694 bits (350), Expect = 0.0 Identities = 551/617 (89%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 738 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 680 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||| ||||||||||||||||||||||||||| Sbjct: 679 ---gtaatctttcttaacaaaaaatctccttaattttactcttattgaatcgcggtaaag 623 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| Sbjct: 622 tattctaattcaataaagatttcgcgggcgaataattactctttcctgtcttatttgtta 563 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| || |||||||||||||||||||||| Sbjct: 562 atttatattataaccttaccaaataaggaaatttttttggtttgttccgccatcccaccc 503 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 502 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 443 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| ||||||||||||||||| || ||| ||||||||||||||||||||| Sbjct: 442 actacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaatttctt 383 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| ||||||||| Sbjct: 382 tccgagtcaattttctcagttttattaacccgggccgctctttattattgtttaaaattt 323 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||| ||||||| Sbjct: 322 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatatggatgctt 263 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 262 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 203 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||| | | ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 202 ctta-ttcctttnctttctttctatcatccctccttttatccacatccctttagttttgc 144 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 143 ttcacaacctagaatcc 127
>gb|AF133466.1|AF133466 Pseudosasa japonica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 694 bits (350), Expect = 0.0 Identities = 552/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 860 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 746 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tantctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 506 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 267 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 266 ttcacaacctagaatcc 250
>gb|U54743.1|PJU54743 Pseudosasa japonica ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 694 bits (350), Expect = 0.0 Identities = 552/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 837 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| ||||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttatttg-actcttattgaatcgcgggaaag 723 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tantctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||||||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccgcaatggagctttccaaaaatttctttccga 483 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 244 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 243 ttcacaacctagaatcc 227
>gb|AY912190.1| Atractantha radiata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1175 Score = 690 bits (348), Expect = 0.0 Identities = 556/624 (89%), Gaps = 24/624 (3%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 847 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 791 Query: 89 aatgtagtccttct-------aaaaaatatccttatttttactcttattg-----aatcg 136 ||||| || |||| ||||||| ||||||||||||||||||||| ||||| Sbjct: 790 -atgtaatctttcttaaaaaaaaaaaatctccttatttttactcttattgtattgaatcg 732 Query: 137 cggtaaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtctt 196 |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 731 cggtaaagtattctaattcaataa--atttcgcgggcgaatatttactctttcctgtctt 674 Query: 197 atttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgcca 251 ||||||||||||||| | ||||||||||||| ||| |||||||||||||| Sbjct: 673 atttgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgcca 614 Query: 252 tcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctg 311 |||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||| Sbjct: 613 tcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctg 554 Query: 312 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 371 ||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||||||||| Sbjct: 553 tcgttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaa 494 Query: 372 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 431 ||||||||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 493 aatttctttccgagtcaattttctcagttttattaacccgggccgctctttattcttgct 434 Query: 432 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttttattatat 491 ||||||||||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||| Sbjct: 433 taaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatttttattatat 374 Query: 492 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattct 551 ||||||||| |||||||||||||||||||||||||||||||||||||| | |||||| || Sbjct: 373 tgatgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcct 314 Query: 552 atatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttt 611 ||||||| ||| ||||||||| ||||||||||||||||||| ||||||||||||||||| Sbjct: 313 atatctttctta-ttcctcttctttctttctatcatccctccttttatccacatcccttt 255 Query: 612 agttttgcttcacaacctagaatc 635 |||||||||||||||||||||||| Sbjct: 254 agttttgcttcacaacctagaatc 231
>gb|AY912210.1| Nastus productus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1067 Score = 684 bits (345), Expect = 0.0 Identities = 483/530 (91%), Gaps = 6/530 (1%) Strand = Plus / Minus Query: 112 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 171 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 751 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataaagatttcgcgg 692 Query: 172 gcgaatatttactctttcctgtcttatttgttaatttata-----aacttaccaaataag 226 |||||||||||||||||||||||||||||||||||||||| | ||||||||||||| Sbjct: 691 gcgaatatttactctttcctgtcttatttgttaatttatattataaccttaccaaataag 632 Query: 227 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 286 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 631 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 572 Query: 287 aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtct 346 |||||||||| | ||||||||||||||||||||||| ||||||||| |||| |||||||| Sbjct: 571 aaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatgattaggtct 512 Query: 347 gaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttatta 406 ||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 511 gaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatta 452 Query: 407 acccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttt 466 ||| |||| |||||||||||||| || ||||||||| ||||| ||||||||||| |||| Sbjct: 451 acctgggccgctctttattattgttttaaatttgtatttcttgtttcaagttacgatttc 392 Query: 467 tcattctctattagttttattatattgatgctttttcacattgccttttatgatgtaatt 526 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| | Sbjct: 391 gaattctctgttatttttattatattgatgctttatcacattgccttttatgatgtaact 332 Query: 527 catagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatca 586 ||||||||||||| | |||||| ||||||||| ||| ||||||||| |||||||||||| Sbjct: 331 catagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatca 273 Query: 587 tccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 272 tccctccttttatccacatccctttagttttgcttcacaacctagaatcc 223 Score = 71.9 bits (36), Expect = 3e-09 Identities = 55/60 (91%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 836 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 778
>gb|AY912191.1| Aulonemia patula ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1186 Score = 684 bits (345), Expect = 0.0 Identities = 549/616 (89%), Gaps = 14/616 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 808 atctagaatatat-ctagatgtgtgtggctatttatctatattctatatttatagataat 750 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| ||||||||||||||||||||||||||||| |||| Sbjct: 749 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatcgcgggaaag 693 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 ||||||||||||||| |||||||||||||||||||||||||||||| |||||||| || Sbjct: 692 aattctaattcaataaagatttcgcgggcgaatatttactctttcctgccttatttgcta 633 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| || ||||||||||||||||||| Sbjct: 632 atttatattataaccttaccaaataaggcaatttttttggnttgttccgccatcccaccc 573 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 572 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 513 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| |||||| || ||||||||||||||||| || ||| |||||||||||||| |||||| Sbjct: 512 actacttctcttttaatggttaggtctgaattccacaatggagcttccaaaaagtttctt 453 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 |||||| ||||||||||||||| ||||||||||| |||||||||||||||||||||||| Sbjct: 452 tccgagccaattttctcagttttcttaacccgggccgctctttattattgcttaaaattt 393 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| |||| |||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 392 gtatttcttgtttcgagttacgatttcgaattctctgttatttttattatattgatgctt 333 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | |||||||||||||||||||||||||||||||||||||| | |||||| ||||||||| Sbjct: 332 tatcacattgccttttatgatgtaattcatagaccatacatattggaatcctatatcttt 273 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 272 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 214 Query: 620 ttcacaacctagaatc 635 |||||||||||||||| Sbjct: 213 ttcacaacctagaatc 198
>gb|AF133467.1|AF133467 Phyllostachys pubescens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1232 Score = 684 bits (345), Expect = 0.0 Identities = 551/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 860 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 802 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 801 ---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgcgggaaag 746 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 745 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 686 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 685 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 626 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 625 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 566 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||| Sbjct: 565 ttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttctttccga 506 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 505 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 446 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 445 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 386 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 385 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 326 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 325 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 267 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 266 ttcacaacctagaatcc 250
>gb|U54744.1|PPU54744 Phyllostachys pubescens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1072 Score = 684 bits (345), Expect = 0.0 Identities = 551/617 (89%), Gaps = 15/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 837 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 779 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||| |||||||||||||||||| |||| Sbjct: 778 ---gtaatctttcttaaaaaaaaatctccttattcg-actcttattgaatcgcgggaaag 723 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 663 Query: 205 atttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatga 264 |||||||| ||||||||||||| ||| ||||||||||||||||||||||||||| Sbjct: 662 atttataaccttaccaaataaggcaatttttttggtttgttccgccatcccacccaatga 603 Query: 265 agtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgc 324 ||| |||||||||||||||||||||||||||| | ||||||||||||||||||||||| | Sbjct: 602 agtcttaggattcttttcaataaaatcctatgcagtcataggttctgtcgttcccactac 543 Query: 325 ttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccga 384 |||||||| |||||||||||||||||||| ||| ||||||| | |||||||||||||||| Sbjct: 542 ttctcctttaatggttaggtctgaatcccacaatggagctttccaaaaatttctttccga 483 Query: 385 gttaattttctcagttttattaacccgggcggctc-----tttattattgcttaaaattt 439 || ||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct: 482 gtcaattttctcagttttattaacccgggccgctctttattttattattgcttaaaattt 423 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 || || || ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 422 ctattttttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 363 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 303 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctta-ttcttcttccttctttctatcatccctccttttatccacatccctttagttttgc 244 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 243 ttcacaacctagaatcc 227
>gb|AY912209.1| Nastus elongatus ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1098 Score = 678 bits (342), Expect = 0.0 Identities = 549/617 (88%), Gaps = 20/617 (3%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 714 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 656 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| | |||||||||||||||||||||||||||||||| Sbjct: 655 ---gtaatctttcttaacaaaaaatcttcttatttttactcttattgaatcgcggtaaag 599 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||| || |||||||||||||||||||||||||||||||||||||||||| Sbjct: 598 tattctaa------aaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 545 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 544 atttatattataaccttaccaaataaggcaattattttggtttgttccgccatcccaccc 485 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 484 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 425 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 424 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 365 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 364 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 305 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||||||||||||||||||| Sbjct: 304 gtatttcttgtttcaagttacgatttcgaattctctgttatttttattatattgatgctt 245 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 244 tatcacattgctttttatgatgtaactcatagaccatacatattggaatcctatatcttt 185 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 184 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 126 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 125 ttcacaacctagaatcc 109
>gb|AF133468.1|AF133468 Schizostachyum luzonicum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1225 Score = 672 bits (339), Expect = 0.0 Identities = 551/618 (89%), Gaps = 17/618 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 861 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 805 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 804 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 748 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 747 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 688 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 687 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 628 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 627 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 568 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 567 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 508 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 507 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 448 Query: 440 gtagttcttctttcaagttacaatttttcattctctatta-gttttattatattgatgct 498 ||| ||||| ||||||||||| |||| ||||||| ||| |||| || |||||||||| Sbjct: 447 gtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttattgatgct 388 Query: 499 ttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 558 || ||||||||||||||||||||||| |||||||||||||| | || ||| ||||||||| Sbjct: 387 ttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcctatatctt 328 Query: 559 atttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttg 618 ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 327 tctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttg 269 Query: 619 cttcacaacctagaatcc 636 |||||||||||||||||| Sbjct: 268 cttcacaacctagaatcc 251
>gb|U54747.1|SLU54747 Schizostachyum luzonicum ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1065 Score = 672 bits (339), Expect = 0.0 Identities = 551/618 (89%), Gaps = 17/618 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 838 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata-- 782 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 |||| || |||| ||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 781 --tgtaatctttcttaacaaaaaatctccttatttt-actcttattgaatcgcggtaaag 725 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 724 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 665 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 664 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 605 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 604 aatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 545 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 544 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 485 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 484 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 425 Query: 440 gtagttcttctttcaagttacaatttttcattctctatta-gttttattatattgatgct 498 ||| ||||| ||||||||||| |||| ||||||| ||| |||| || |||||||||| Sbjct: 424 gtatttcttgtttcaagttacgatttcgaattctctgttatttttttttttattgatgct 365 Query: 499 ttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctt 558 || ||||||||||||||||||||||| |||||||||||||| | || ||| ||||||||| Sbjct: 364 ttatcacattgccttttatgatgtaactcatagaccatacatattgaaatcctatatctt 305 Query: 559 atttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttg 618 ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 304 tctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttg 246 Query: 619 cttcacaacctagaatcc 636 |||||||||||||||||| Sbjct: 245 cttcacaacctagaatcc 228
>gb|AY912205.1| Greslania rivularis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1228 Score = 662 bits (334), Expect = 0.0 Identities = 548/617 (88%), Gaps = 16/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 843 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 785 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||| ||||| Sbjct: 784 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcgataaag 728 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 727 tattctaattcaataaagatttcgcgggcgaatatttactctttcctgtcttatttgtta 668 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | |||| |||||||| ||| |||||||||||||||||||||| Sbjct: 667 atttatattataaccttagcaaataaggcaatttttttggtttgttccgccatcccaccc 608 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 ||| |||| |||||||||||||||||||||||||||| | |||||||||||||||||||| Sbjct: 607 aataaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcgttccc 548 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 547 actacttctcctttaatgattaggtctgaatcccacaatggagcttccaaaaaatttctt 488 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 487 tccgagtcaattttctcagttttattaacccgggccgctctttattattgttttaaattt 428 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 ||| ||||| ||||||||||| |||| ||||||| ||| ||| || ||||||||||| Sbjct: 427 gtatttcttgtttcaagttacgatttcgaattctctgtta--ttttttttattgatgctt 370 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||| Sbjct: 369 tatcacattgccttttatgatgtaactcatagaccatacatattggaatcctatatcttt 310 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| |||||||||||||| |||| ||||||||||||| ||||||||||| Sbjct: 309 ctta-ttcctcttctttctttctatcatctctccttttatccacatccttttagttttgc 251 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 250 ttcacaacctagaatcc 234
>gb|AY912204.1| Greslania circinata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1170 Score = 662 bits (334), Expect = 0.0 Identities = 487/539 (90%), Gaps = 6/539 (1%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 162 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 789 aaaaaatctccttatttttactcttattgaatcgcggtaaagtattctaattcaataaag 730 Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 729 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 670 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 669 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 610 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 609 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 550 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 ||||||||||||||| ||| ||||||||||| |||||||||||||||| |||||||||| Sbjct: 549 attaggtctgaatcccacaatggagcttccaataaatttctttccgagtcaattttctca 490 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagt 457 ||||||||||||||| | ||||||| |||||| || ||||||||| ||||| |||||||| Sbjct: 489 gttttattaacccggtccgctctttgttattgttttaaatttgtatttcttgtttcaagt 430 Query: 458 tacaatttttcattctctattagttttattatattgatgctttttcacattgccttttat 517 || |||| ||||||| ||| |||| ||||||||||||||| |||||||||||||||| Sbjct: 429 tatgatttcgaattctctgttattttttttatattgatgctttatcacattgccttttat 370 Query: 518 gatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttc 577 ||||||| |||||||||||||| | |||||| ||||||||| ||| ||||||||| ||| Sbjct: 369 gatgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttc 311 Query: 578 tttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 tttctatcatccctccttttatccacatccctttagttttgcttcacaacctagaatcc 252
>gb|AF133476.1|AF133476 Brachyelytrum erectum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1248 Score = 662 bits (334), Expect = 0.0 Identities = 466/511 (91%), Gaps = 1/511 (0%) Strand = Plus / Minus Query: 124 tcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttac 183 ||||||||||| | | |||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 762 tcttattgaattgggttaaagtattctaattcaataaggatttcgcgggcgaatatttac 703 Query: 184 tctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttg 243 ||||||||||||||||||||||||||||| ||||||||||||| ||| |||||| Sbjct: 702 tctttcctgtcttatttgttaatttataaccttaccaaataaggcaatttttttggtttg 643 Query: 244 ttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcat 303 ||||||||||||| |||||||||| |||||||||||||||||||||||||||||| |||| Sbjct: 642 ttccgccatcccatccaatgaagtattaggattcttttcaataaaatcctatggagtcat 583 Query: 304 aggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagc 363 ||||||||||||||||||||||||| || ||||||||||||| |||||||||| ||||| Sbjct: 582 gggttctgtcgttcccactgcttctcttttaatggttaggtctcaatcccgcaatggagc 523 Query: 364 ttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctcttta 423 ||||||||||| | ||||||||| |||||||||||||||| |||||||| | |||||||| Sbjct: 522 ttccaaaaaatatatttccgagtaaattttctcagttttaataacccggaccgctcttta 463 Query: 424 ttattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagttt 483 ||||||||| ||||| ||||||||| ||||||||||| |||| ||| ||| ||| ||| Sbjct: 462 ttattgctttaaattagtagttcttgtttcaagttacgatttcgaattttctgttatttt 403 Query: 484 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 543 ||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| | | Sbjct: 402 tattatattgatgctttatcacattgccttttatgatataattcatagaccatacatatt 343 Query: 544 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 603 ||||| ||||||||| |||| ||||||||||||||||||||||||| ||||||||||||| Sbjct: 342 ggaatcctatatctttttta-ttcctcttccttctttctatcatccttccctttatccac 284 Query: 604 atccctttagttttgcttcacaacctagaat 634 ||||||||||||||||||||||||||||||| Sbjct: 283 atccctttagttttgcttcacaacctagaat 253
>gb|AF133473.1|AF133473 Otatea acuminata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1185 Score = 662 bits (334), Expect = 0.0 Identities = 469/515 (91%), Gaps = 6/515 (1%) Strand = Plus / Minus Query: 127 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 186 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 758 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 699 Query: 187 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 241 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 698 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 639 Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 638 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 579 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 578 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 519 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 518 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 459 Query: 422 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 481 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 458 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 399 Query: 482 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 541 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 398 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 339 Query: 542 gtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatcc 601 |||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 338 ttggaatcctatatctttctta-ttcctcttctttctttctatcatccctccttttatcc 280 Query: 602 acatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||||| Sbjct: 279 acatccctttagttttgcttcacaacctagaatcc 245 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagata 86 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 813 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata 757
>gb|U54749.1|OAU54749 Otatea acuminata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1025 Score = 662 bits (334), Expect = 0.0 Identities = 469/515 (91%), Gaps = 6/515 (1%) Strand = Plus / Minus Query: 127 tattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttactct 186 |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 735 tattgaatcgcggtaaagtattctaattcaataaagatttcgcgggcgaatatttactct 676 Query: 187 ttcctgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtt 241 ||||||||||||||||||||||||| | ||||||||||||| ||| |||| Sbjct: 675 ttcctgtcttatttgttaatttatattataaccttaccaaataaggcaatttttttggtt 616 Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 615 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 556 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||| Sbjct: 555 ataggttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatgga 496 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||| Sbjct: 495 gcttccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctt 436 Query: 422 tattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctattagt 481 ||||||||||| ||||||||| ||||| |||| |||||| |||| ||||||| ||| | Sbjct: 435 tattattgcttcaaatttgtatttcttgtttcgagttacgatttcgaattctctgttatt 376 Query: 482 tttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacaca 541 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | Sbjct: 375 tttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacata 316 Query: 542 gtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatcc 601 |||||| ||||||||| ||| ||||||||| ||||||||||||||||||| ||||||| Sbjct: 315 ttggaatcctatatctttctta-ttcctcttctttctttctatcatccctccttttatcc 257 Query: 602 acatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||||| Sbjct: 256 acatccctttagttttgcttcacaacctagaatcc 222 Score = 67.9 bits (34), Expect = 4e-08 Identities = 53/58 (91%), Gaps = 1/58 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagata 86 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||| Sbjct: 790 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagata 734
>gb|AF133474.1|AF133474 Poa pratensis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1097 Score = 648 bits (327), Expect = 0.0 Identities = 474/526 (90%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| Sbjct: 783 tttttactcttattgaataatggtaaagtattctaattcaataaggatttcgcgggcgaa 724 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 |||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 723 tatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaatttttt 664 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||| ||||||||||||||||||||||| |||||||| |||| ||||||||||||| Sbjct: 663 tggtttgctccgccatcccacccaatgaagtattaggatttttttaaataaaatcctatt 604 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 |||||||||||| |||||||||||||||||||||||||||||||||| ||| || || Sbjct: 603 aaatcataggttccgtcgttcccactgcttctccttgaatggttaggttctaattccaca 544 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||| ||||||| |||||||||||||||||||||||||||||||| |||| ||| Sbjct: 543 atggagcttcaaaaaaatatctttccgagttaattttctcagttttattaatccggtcgg 484 Query: 417 c-------tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttca 469 | ||||||||||||||| |||||| ||||||| ||||||||||| |||| | | Sbjct: 483 ctctttattctttattattgctttaaatttagagttcttttttcaagttacgatttctaa 424 Query: 470 ttctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcat 529 ||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||||| Sbjct: 423 ttctctattagttttattatattgatgctttatcacattgttttttatgatgcaattcat 364 Query: 530 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatcc 589 |||||||||| | |||||| |||||||||| ||| ||||||||||||||||||||||||| Sbjct: 363 agaccatacatattggaatcctatatcttacttaattcctcttccttctttctatcatcc 304 Query: 590 ctccctttatccacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 303 ctccctttatccacatccctttagttttgcttcacaacctagaatc 258
>gb|AF133475.1|AF133475 Avena sativa ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1187 Score = 622 bits (314), Expect = e-175 Identities = 483/542 (89%), Gaps = 11/542 (2%) Strand = Plus / Minus Query: 105 aaaatatccttatttttactcttattgaatcgcg------gtaaagtattctaattcaat 158 |||||||| ||||||||||||||||||||| | |||||||||||||||| | Sbjct: 740 aaaatatctttatttttactcttattgaataatggtaatggtaaagtattctaattttaa 681 Query: 159 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 218 ||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 680 aaggatttcgcgggcgaatatttactcttttctgtcttatttgttaatttataaccttac 621 Query: 219 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 278 ||||||||| || ||||||||||||||||| |||||||||||| |||||||||| Sbjct: 620 caaataagaaaatttttttggtttgttccgccatcctacccaatgaagtattaggattct 561 Query: 279 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 338 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 560 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcctctccttgaatgg 501 Query: 339 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 398 |||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||||| Sbjct: 500 ttaggtctgaattccacaatggagcttccaaaaaatttctttcccagttaattttctcag 441 Query: 399 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaa--- 455 ||||||||||| || |||||||||||||||||| |||||| |||||||| |||||| Sbjct: 440 ttttattaaccaggatggctctttattattgctttaaatttctagttcttgtttcaagtt 381 Query: 456 --gttacaatttttcattctctattagttttattatattgatgctttttcacattgcctt 513 ||||| |||| | |||||||||| |||||||||||||||||||| ||||||||| || Sbjct: 380 acgttacgatttctaattctctattttttttattatattgatgctttatcacattgcttt 321 Query: 514 ttatgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttc 573 |||||||| ||||||||||||||||| | |||||| |||||||||| ||| | ||||||| Sbjct: 320 ttatgatgcaattcatagaccatacatattggaatcctatatcttacttaatccctcttc 261 Query: 574 cttctttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaa 633 ||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| Sbjct: 260 tttctttctatcatccctccctttatccgcatccctttagttttccttcacaacctagaa 201 Query: 634 tc 635 || Sbjct: 200 tc 199 Score = 48.1 bits (24), Expect = 0.036 Identities = 47/52 (90%), Gaps = 2/52 (3%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatat-ttatctaaattctatattt 79 ||||||||||||| | ||||||||||| ||| ||||||||||||||||||| Sbjct: 808 atctagaatatat-ctagatgtgtgtgtctatattatctaaattctatattt 758
>gb|AF133492.1|AF133492 Humbertochloa greenwayi ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1218 Score = 620 bits (313), Expect = e-174 Identities = 470/523 (89%), Gaps = 5/523 (0%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtactctaattcaataaagatttcgcgggcgaat 710 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaactttttt 650 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattaggattgttttcaaaaaaatcctatcc 590 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | |||||||||||||||||||||| |||||||||| ||||||||||| |||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccacagcttctcctttaatggttaggtttgaatctcgcaa 530 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||| ||||||||||| |||||||||||||||||||||||||| || Sbjct: 529 tggagcttccaaaaaatatctttccgagtccattttctcagttttattaacccgggctgc 470 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaag----ttacaatttttcattct 473 ||||| |||||||||| |||||||| ||||| |||||| |||| ||||| ||||| Sbjct: 469 tctttgttattgcttagaatttgtatttcttgtttcaatcaaattacgattttgaattct 410 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || || |||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 409 ctgctatttttattatattgatgctttatcacattgccttttatgatgtaattcatagac 350 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||||||| Sbjct: 349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccctcc 291 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 290 ttttatccacatccctttagttttggttcacaacctagaatcc 248 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| |||||||||| |||||||||||| Sbjct: 861 atctagaatatat-ctagatgtgtgtgtttatttatctatattctatattta 811
>gb|U54750.1|RPU54750 Rhipidocladum pittieri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1010 Score = 613 bits (309), Expect = e-172 Identities = 453/502 (90%), Gaps = 6/502 (1%) Strand = Plus / Minus Query: 140 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||| Sbjct: 726 taaagtattctaattcaataaagatttcgcgggcgaatatttactctttcctgccttatt 667 Query: 200 tgttaatttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcc 254 |||||||||||| | ||||||||||||| ||| ||||||||||||||||| Sbjct: 666 tgttaatttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcc 607 Query: 255 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 314 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||||| Sbjct: 606 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttctgtcg 547 Query: 315 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 374 |||||||| ||||||||| ||||||||||||||||| || ||| |||||||||||||||| Sbjct: 546 ttcccactacttctcctttaatggttaggtctgaattccacaatggagcttccaaaaaat 487 Query: 375 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgcttaa 434 |||||||||||| ||||||||||||||||||||||| || ||||||||||||||||||| Sbjct: 486 ttctttccgagtcaattttctcagttttattaaccccggacgctctttattattgcttaa 427 Query: 435 aatttgtagttcttctttcaagttacaatttttcattctctattagttttattatattga 494 ||||| || ||||| |||| |||||| |||| |||| || ||| |||||||||||||| Sbjct: 426 aatttctatttcttgtttcgagttacgatttcgaattcgctgttatttttattatattga 367 Query: 495 tgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctata 554 |||||| |||||||||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 366 tgctttatcacattgccttttatgatgtaattcatagaccatacatattggaatcctata 307 Query: 555 tcttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagt 614 |||| ||| ||||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 306 tctttctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagt 248 Query: 615 tttgcttcacaacctagaatcc 636 |||||||||||||||||||||| Sbjct: 247 tttgcttcacaacctagaatcc 226 Score = 56.0 bits (28), Expect = 1e-04 Identities = 47/52 (90%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| |||||||||| |||||||||||| Sbjct: 775 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatattta 725
>gb|AY912201.1| Cathariostachys capitata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1202 Score = 607 bits (306), Expect = e-170 Identities = 540/617 (87%), Gaps = 14/617 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||| | |||||||||| |||||||||||||||||||| Sbjct: 838 atctagaatatat-ctagatgtgtgggtctatttatctatattctatatttatagataat 780 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||| |||||||||||| ||| Sbjct: 779 ---gtaatctttcttaacaaaaaatctccttatttttactctgattgaatcgcgggcaag 723 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| ||||||||||||||||| |||||| |||||||| |||||||| Sbjct: 722 tattctaattcaataaagatttcgcgggcgaatatctactctctcctgtctcatttgtta 663 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 || |||| | |||| |||||||| ||| || ||||||||||||||||||| Sbjct: 662 atctatatcataaccttatcaaataaggcaattattttggnttgttccgccatcccaccc 603 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||||||||||||||| | ||||||||||||||||||| Sbjct: 602 aatgaagtattaggattcttttcaataaaatcctatgcaggcataggttctgtcgttccc 543 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| ||||| |||||||||||||| ||| ||||||||||||||||||||| Sbjct: 542 actacttctcctttaatggataggtctgaatcccacaatggagcttccaaaaaatttctt 483 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| ||||||||||| ||||||||||||||| ||||||||||||||||| |||||| Sbjct: 482 tccgagtcaattttctcaggtttattaacccgggccgctctttattattgctttaaattt 423 Query: 440 gtagttcttctttcaagttacaatttttcattctctattagttttattatattgatgctt 499 | | ||||| ||||||||||| |||| || |||| | | ||||||||||||||||||| Sbjct: 422 ggatttcttgtttcaagttacgatttcgaatgctctgtgatttttattatattgatgctt 363 Query: 500 tttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatctta 559 | ||||||||| ||||||||||||| |||||| ||||||| | |||||| ||||||||| Sbjct: 362 tatcacattgctttttatgatgtaactcataggccatacatattggaatcctatatcttt 303 Query: 560 tttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgc 619 ||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 302 ctta-ttcctcttctttctttctatcatccctccttttatccacatccctttagttttgc 244 Query: 620 ttcacaacctagaatcc 636 ||||||||||||||||| Sbjct: 243 ttcacaacctagaatcc 227
>gb|DQ289157.1| Oryza punctata J ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1116 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| | |||||||| Sbjct: 875 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatctttatttatc 819 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 818 tatattctatattta 804
>gb|DQ289156.1| Oryza grandiglumis I ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 876 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 820 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 819 tatattctatattta 805
>gb|DQ289155.1| Oryza latifolia H ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 765 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 706 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 705 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 646 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 645 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 586 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 585 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 526 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 467 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 466 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 407 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 406 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 347 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 346 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 288 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 287 ttttatccacatccctttagttttgcttcacaacttagaatcc 245 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 877 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 821 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 820 tatattctatattta 806
>gb|DQ289154.1| Oryza officinalis G ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1118 Score = 605 bits (305), Expect = e-170 Identities = 469/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 766 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 707 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 706 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 647 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 646 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 587 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 586 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 527 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 526 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 468 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 467 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 408 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 407 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 348 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 347 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 289 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 288 ttttatccacatccctttagttttgcttcacaacttagaatcc 246 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 877 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 821 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 820 tatattctatattta 806
>gb|AF133485.1|AF133485 Arundo donax ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1207 Score = 601 bits (303), Expect = e-168 Identities = 478/539 (88%), Gaps = 16/539 (2%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 791 tccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcg 732 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 731 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 672 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 671 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 612 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 611 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 552 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 551 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 492 Query: 411 gggcggctc-------tttattattgcttaaaatttgtagttcttctttcaagttacaat 463 |||| |||| ||||||||||||| |||||| | || || ||||||||||| || Sbjct: 491 gggctgctccttattatttattattgctttaaattttgattttttatttcaagttacgat 432 Query: 464 ttttcattctctattagttttatt--------atattgatgctttttcacattgcctttt 515 || ||||||| ||| ||||||| ||||||||||||| |||||||||||||| Sbjct: 431 ttcgaattctctcttatttttattattttattatattgatgctttatcacattgcctttt 372 Query: 516 atgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcct 575 |||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||| Sbjct: 371 atgatgtaattcatagaccatacacattggaatcctatatctttctta-ttcttcttcct 313 Query: 576 tctttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaat 634 ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 312 tctgtctatcatccctccttttatccacatccctttagttttgcttcacaacctagaat 254
>gb|AF133458.1|AF133458 Leersia virginica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1209 Score = 599 bits (302), Expect = e-168 Identities = 466/520 (89%), Gaps = 6/520 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 747 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 688 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 687 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 628 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||| | ||||||| |||||||||| Sbjct: 627 ggtttgttccgccatcccacccaatgaagtattgggacttttttcaagaaaatcctatcc 568 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 567 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 508 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || ||||||||||||||||||||||| || Sbjct: 507 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgggacgc 449 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||||||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 448 tctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 389 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| ||||||| |||||||||||||| Sbjct: 388 ctgttatttttattatattgatgctttatcacattgctttttatggtgtaattcatagac 329 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 328 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 270 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaa 633 ||||||||||||||||||||||||||||||||| ||||| Sbjct: 269 ttttatccacatccctttagttttgcttcacaacttagaa 230 Score = 63.9 bits (32), Expect = 6e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | |||||||| || |||||||||| |||||||||||||||||||| Sbjct: 845 atctagaatatat-ctagatgtgtatgtttatttatctatattctatatttatagataat 787
>gb|AY847081.1| Phragmites australis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 593 bits (299), Expect = e-166 Identities = 472/530 (89%), Gaps = 9/530 (1%) Strand = Plus / Minus Query: 114 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 173 ||||||||||||||||||||||| | |||||||||||||| |||||| ||||||||||| Sbjct: 745 ttatttttactcttattgaatcgtg-taaagtattctaatccaataaagatttcgcgggc 687 Query: 174 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 233 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 686 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 627 Query: 234 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 293 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 626 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 567 Query: 294 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 353 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 566 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 507 Query: 354 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 413 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 506 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 447 Query: 414 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattct 473 |||| |||||||||||| || ||| || || ||||||||||| |||| ||||| Sbjct: 446 ttgctccttattattgctttaatttttgtttttttgtttcaagttacgatttcgaattct 387 Query: 474 ctattagtt-------ttattatattgatgctttttcacattgccttttatgatgtaatt 526 || ||| || |||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 386 cttttattttattattttattatattgatgctttatcacattgccttttatgatgtaatt 327 Query: 527 catagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatca 586 ||||||||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||||| Sbjct: 326 catagaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatca 268 Query: 587 tccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 267 tccctccttttatccacatccctttagttttgcttcacaacctagaatcc 218
>ref|XM_481016.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1981 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 1980 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1937
>ref|XM_481017.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2472 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2458 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2399 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2398 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2339 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2338 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2279 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2278 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2219 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2218 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2160 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2159 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2100 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2099 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2040 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2039 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1981 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 1980 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1937
>gb|AY522330.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare chloroplast, complete genome Length = 134551 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78933 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 78934 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78977 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 78343 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 78399 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 78400 tatattctatattta 78414
>gb|AY522331.1| Oryza sativa (japonica cultivar-group) isolate PA64S chloroplast, complete genome Length = 134551 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78456 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78515 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78516 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78575 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78576 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78635 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78636 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78695 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78696 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78754 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78755 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78814 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78815 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78874 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78875 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78933 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 78934 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78977 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 78343 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 78399 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 78400 tatattctatattta 78414
>gb|AY522329.1| Oryza sativa (indica cultivar-group) isolate 93-11 chloroplast, complete genome Length = 134496 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78399 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78458 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78459 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78518 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78519 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78578 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78638 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78639 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78697 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78698 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78757 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78758 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78817 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78818 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78876 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 78877 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78920 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 78287 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 78343 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 78344 tatattctatattta 78358
>gb|AC136521.2| Oryza sativa (japonica cultivar-group) chromosome 5 BAC clone OSJNBa0034M22, complete sequence Length = 149435 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54462 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54521 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54522 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54581 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54582 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54641 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54642 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54701 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54702 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54760 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54761 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54820 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54821 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54880 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 54881 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 54939 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 54940 ttttatctacatcccctttagttttgcttcacaacttagaatcc 54983 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 54354 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 54410 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 54411 tatattctatattta 54425
>gb|AC134345.2| Oryza sativa (jpaonica cultivar-group) chromosome 5 PAC clone P0012A07, complete sequence Length = 136858 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 127290 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 127349 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 127350 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 127409 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 127410 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 127469 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 127470 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 127529 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 127530 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 127588 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 127589 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 127648 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 127649 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 127708 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 127709 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 127767 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 127768 ttttatctacatcccctttagttttgcttcacaacttagaatcc 127811 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 127182 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 127238 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 127239 tatattctatattta 127253
>gb|DQ289153.1| Oryza glumipatula F ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1110 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 760 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 701 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 700 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 641 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 640 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 581 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 580 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 521 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 520 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 462 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 461 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 402 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 401 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 342 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 341 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 283 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 282 ttttatctacatcccctttagttttgcttcacaacttagaatcc 239 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 869 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 813 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 812 tatattctatattta 798
>gb|DQ289152.1| Oryza glumipatula E ribosomal protein L16 (ribosomal protein L16) gene, partial cds; chloroplast Length = 1109 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 868 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 812 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 811 tatattctatattta 797
>gb|DQ289151.1| Oryza meridionalis D ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1112 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 871 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 815 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 814 tatattctatattta 800
>gb|DQ289150.1| Oryza barthii C ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1106 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 400 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 281 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 280 ttttatctacatcccctttagttttgcttcacaacttagaatcc 237 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 865 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 809 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 808 tatattctatattta 794
>gb|DQ289148.1| Oryza sativa A ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1113 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 759 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 700 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 699 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 640 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 639 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 580 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 579 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 520 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 519 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 461 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 460 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 401 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 400 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 341 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 340 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 282 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 281 ttttatctacatcccctttagttttgcttcacaacttagaatcc 238 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 872 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 816 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 815 tatattctatattta 801
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 14455243 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 14455184 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 14455183 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 14455124 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 14455123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 14455064 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 14455063 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 14455004 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 14455003 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 14454945 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 14454944 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 14454885 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 14454884 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 14454825 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 14454824 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14454766 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 14454765 ttttatctacatcccctttagttttgcttcacaacttagaatcc 14454722 Score = 379 bits (191), Expect = e-102 Identities = 354/404 (87%), Gaps = 7/404 (1%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 11895328 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 11895269 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 11895268 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 11895209 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 11895208 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 11895150 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 11895149 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 11895090 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11895089 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11895030 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 11895029 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 11894971 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 11894970 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11894927 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 11895435 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 11895376 Query: 178 atttactctttcctgtcttatttgtta 204 ||||||||||||||||||||||||||| Sbjct: 11895375 atttactctttcctgtcttatttgtta 11895349 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 14455350 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 14455294 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 14455293 tatattctatattta 14455279 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 11895539 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 11895483 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 11895482 tatattctatattta 11895468
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9258613 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9258554 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9258553 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9258494 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9258493 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9258434 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9258433 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9258374 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9258373 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9258315 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 9258314 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 9258255 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9258254 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9258195 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9258194 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9258136 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 9258135 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9258092 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 9258718 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 9258662 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 9258661 tatattctatattta 9258647
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 12757003 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 12757062 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 12757063 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 12757122 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 12757123 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 12757182 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 12757183 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 12757242 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 12757243 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 12757301 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 12757302 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 12757361 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 12757362 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 12757421 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 12757422 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 12757480 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 12757481 ttttatctacatcccctttagttttgcttcacaacttagaatcc 12757524 Score = 513 bits (259), Expect = e-142 Identities = 462/525 (88%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 19544581 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 19544522 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 19544521 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 19544462 Query: 238 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 19544461 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 19544402 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 19544401 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 19544342 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 19544341 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 19544284 Query: 417 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 472 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 19544283 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 19544224 Query: 473 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 532 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 19544223 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 19544164 Query: 533 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctc 592 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 19544163 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 19544105 Query: 593 cctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 | |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 19544104 cttttatctacatcccctttagttttgcttcacaacttagaatcc 19544060 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 12756895 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 12756951 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 12756952 tatattctatattta 12756966 Score = 48.1 bits (24), Expect = 0.036 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | |||||||| || |||||||||| |||||||||||| Sbjct: 19544664 atctagaatatat-ctagatgtgtatgtttatttatctatattctatattta 19544614
>dbj|AP005161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0036E18 Length = 141148 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 69826 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 69767 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 69766 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 69707 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 69706 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 69647 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 69646 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 69587 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 69586 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 69528 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 69527 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 69468 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 69467 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 69408 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 69407 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 69349 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 69348 ttttatctacatcccctttagttttgcttcacaacttagaatcc 69305 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 69931 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 69875 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 69874 tatattctatattta 69860
>dbj|AP005707.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0465E03 Length = 151206 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 147046 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 146987 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 146986 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 146927 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 146926 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 146867 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 146866 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 146807 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 146806 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 146748 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 146747 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 146688 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 146687 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 146628 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 146627 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 146569 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 146568 ttttatctacatcccctttagttttgcttcacaacttagaatcc 146525 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 147153 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 147097 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 147096 tatattctatattta 147082
>dbj|AP005683.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1585_D02 Length = 103172 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 54808 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 54749 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 54748 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 54689 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 54688 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 54629 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 54628 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 54569 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 54568 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 54510 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 54509 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 54450 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 54449 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 54390 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 54389 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 54331 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 54330 ttttatctacatcccctttagttttgcttcacaacttagaatcc 54287 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 54915 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 54859 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 54858 tatattctatattta 54844
>dbj|AK072149.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013128P04, full insert sequence Length = 2475 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2460 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2401 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2400 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2341 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2340 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2281 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2280 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2221 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 2220 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 2162 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 2161 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 2102 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2101 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 2042 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 2041 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1983 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 1982 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1939
>dbj|AP006728.1| Oryza nivara chloroplast DNA, complete genome Length = 134494 Score = 591 bits (298), Expect = e-165 Identities = 469/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78396 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78455 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78456 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78515 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78516 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78575 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78576 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78635 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78636 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78694 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78695 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78754 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78755 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78814 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78815 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78873 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 78874 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78917 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 78287 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 78343 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 78344 tatattctatattta 78358
>gb|AY847095.1| Megastachya mucronata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1154 Score = 583 bits (294), Expect = e-163 Identities = 471/529 (89%), Gaps = 5/529 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||| |||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 748 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 690 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||| Sbjct: 689 ggcgaatatttactctttcctgtcttatttgttaatttaaaaccttaccaaataaaacaa 630 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 629 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaat 570 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 569 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 510 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||| ||||||||| |||||||||||||||||||| || Sbjct: 509 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaatcc 450 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| |||| || Sbjct: 449 cggctgctcttttttattgctttaaatttttatttattgtttgaagttacgatttcgaat 390 Query: 471 tctctattagtttt---attatattgatgctttttcacattgccttttatgatgtaattc 527 ||||| || |||| |||||||||||||||| |||||||||||||||||||||||||| Sbjct: 389 tctctcttttttttataattatattgatgctttatcacattgccttttatgatgtaattc 330 Query: 528 atagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcat 587 |||||||||||||| |||||| ||||||||| ||| ||| | |||||||| |||||||| Sbjct: 329 atagaccatacacattggaatcctatatctttctta-ttctttttccttctatctatcat 271 Query: 588 ccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 270 ccctccttttatccacatccctttagttttgcttcacaacctagaatcc 222
>emb|BX569685.1|OSJN00291 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0061C08, complete sequence Length = 145980 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 72298 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 72239 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 72238 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 72179 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 72178 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 72119 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 72118 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 72059 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 72058 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 72000 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 71999 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 71940 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 71939 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 71880 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 71879 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 71821 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 71820 ttttatctacatcccctttagttttgcttcacaacttagaatcc 71777 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 72409 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 72353 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 72352 tatattctatattta 72338
>gb|AC122148.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0075K12, complete sequence Length = 125936 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76638 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76697 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 76698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 76757 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76758 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76817 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 76818 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 76877 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 76878 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 76936 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 76937 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 76996 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76997 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 77056 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 77057 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 77115 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 77116 ttttatctacatcccctttagttttgcttcacaacttagaatcc 77159 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 76532 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 76588 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 76589 tatattctatattta 76603
>gb|AC099402.2| Oryza sativa chromosome 10 clone OSJNBa0022D10, complete sequence Length = 144459 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10702 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10761 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10762 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10821 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10822 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10881 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10882 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10941 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10942 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 11000 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 11001 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 11060 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 11061 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 11120 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 11121 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 11179 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 11180 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11223 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 10596 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 10652 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 10653 tatattctatattta 10667
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9191225 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9191166 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9191165 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9191106 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9191105 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9191046 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9191045 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9190986 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9190985 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9190927 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9190926 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9190867 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9190866 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9190807 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9190806 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9190748 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 9190747 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9190704 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 9114272 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 9114213 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 9114212 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 9114153 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 9114152 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 9114093 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 9114092 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 9114033 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 9114032 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 9113974 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 9113973 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 9113914 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 9113913 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 9113854 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 9113853 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 9113795 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 9113794 ttttatctacatcccctttagttttgcttcacaacttagaatcc 9113751 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 9191336 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 9191280 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 9191279 tatattctatattta 9191265 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 9114383 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 9114327 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 9114326 tatattctatattta 9114312
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10370246 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10370305 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10370306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10370365 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10370366 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10370425 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10370426 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10370485 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10370486 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10370544 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10370545 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10370604 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10370605 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10370664 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 10370665 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 10370723 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 10370724 ttttatctacatcccctttagttttgcttcacaacttagaatcc 10370767 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 10370140 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 10370196 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 10370197 tatattctatattta 10370211
>dbj|AK058501.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-F04, full insert sequence Length = 547 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 532 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 473 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 472 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 413 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 412 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 353 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 352 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 293 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || ||||||||||||| |||| |||| || Sbjct: 292 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttactaactcgggacgc 234 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 233 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 174 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 173 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 114 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 113 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 55 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 54 ttttatctacatcccctttagttttgcttcacaacttagaatcc 11
>gb|DQ289149.1| Oryza sativa ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1103 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 758 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 699 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 698 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 639 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 638 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 579 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 578 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 519 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 518 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 460 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||| | Sbjct: 459 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattat 400 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 399 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 340 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 339 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 281 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 280 ttttatctacatcccctttagttttgcttcacaacttagaatcc 237 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 862 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 806 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 805 tatattctatattta 791
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 583 bits (294), Expect = e-163 Identities = 468/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 10376285 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 10376344 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 10376345 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 10376404 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 10376405 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 10376464 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 10376465 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 10376524 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 10376525 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 10376583 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| | || ||||| Sbjct: 10376584 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgacttcgaattct 10376643 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 10376644 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 10376703 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 10376704 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 10376762 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 10376763 ttttatctacatcccctttagttttgcttcacaacttagaatcc 10376806 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 10376179 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 10376235 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 10376236 tatattctatattta 10376250
>gb|DQ289158.1| Oryza australiensis k ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1117 Score = 581 bits (293), Expect = e-162 Identities = 466/523 (89%), Gaps = 6/523 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| Sbjct: 769 ttttactcttattgaatcgcggtaaagtattttaattcaataaaaatttcgcgggcgaat 710 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||| ||| Sbjct: 709 atttactctttcctgtcttatttgttaattcataaccttatcaaataaggcaattttttt 650 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 649 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 590 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||| Sbjct: 589 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatttcgcaa 530 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 529 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 471 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 470 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 411 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 410 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 351 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| ||||||||| |||||||||||| ||| Sbjct: 350 catacatattggaatcctatatctttcttattt-ctcttccttgtttctatcatccttcc 292 Query: 594 ctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||| |||||||| Sbjct: 291 ttttatccacatccctttagttttgcttcacaacttagaatcc 249 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 876 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 820 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 819 tatattctatattta 805
>ref|XM_479425.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2380 Score = 575 bits (290), Expect = e-161 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 2366 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 2307 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 2306 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 2247 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 2246 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 2187 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 2186 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 2127 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 2126 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 2068 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 2067 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 2008 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 2007 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 1948 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 1947 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 1889 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 1888 ttttatctacatcccctttagttttgcttcacaacttagaatcc 1845
>emb|X15901.1|CHOSXX Oryza sativa (japonica cultivar-group) chloroplast genome Length = 134525 Score = 575 bits (290), Expect = e-161 Identities = 468/524 (89%), Gaps = 8/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 78444 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 78503 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 78504 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 78563 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 78564 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 78623 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 78624 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 78683 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 78684 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 78742 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 78743 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 78802 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 78803 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 78862 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | | |||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 78863 catacata-ttgaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 78920 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 78921 ttttatctacatcccctttagttttgcttcacaacttagaatcc 78964 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 78331 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 78387 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 78388 tatattctatattta 78402
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 575 bits (290), Expect = e-161 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 27923930 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 27923989 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 27923990 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 27924049 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 27924050 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 27924109 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 27924110 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 27924169 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 27924170 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 27924228 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 27924229 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 27924288 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 27924289 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 27924348 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 27924349 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 27924407 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 27924408 ttttatctacatcccctttagttttgcttcacaacttagaatcc 27924451 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 27923826 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 27923882 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 27923883 tatattctatattta 27923897
>gb|AF133462.1|AF133462 Pariana radiciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1262 Score = 575 bits (290), Expect = e-161 Identities = 480/538 (89%), Gaps = 11/538 (2%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 158 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 787 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 729 Query: 159 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 218 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 728 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 670 Query: 219 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 278 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 669 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 612 Query: 279 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 338 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 611 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 552 Query: 339 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 398 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 551 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 492 Query: 399 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 458 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 491 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 432 Query: 459 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 518 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 431 acgatttcaaattctctattattttt-ttatattgatgctttattacattgccttttatg 373 Query: 519 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 578 |||||| |||||||||||||| | |||||| ||||||||| ||||| ||||||| |||| Sbjct: 372 atgtaactcatagaccatacatattggaatcctatatctttcttatt-cctcttctttct 314 Query: 579 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| Sbjct: 313 ttctatcatccctccttttatccacatcc-tttagttttgcttcacaacctagaatcc 257 Score = 65.9 bits (33), Expect = 2e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | |||||| |||| |||||||||| |||||||||||||||||||| Sbjct: 866 atctagaatatat-ctagatgtctgtgtctatttatctatattctatatttatagataat 808 Query: 89 a 89 | Sbjct: 807 a 807
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 575 bits (290), Expect = e-161 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 87288 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 87347 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 87348 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 87407 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 87408 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 87467 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 87468 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 87527 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 87528 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 87586 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 87587 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 87646 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 87647 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 87706 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 87707 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 87765 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 87766 ttttatctacatcccctttagttttgcttcacaacttagaatcc 87809 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 87184 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 87240 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 87241 tatattctatattta 87255
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 575 bits (290), Expect = e-161 Identities = 467/524 (89%), Gaps = 7/524 (1%) Strand = Plus / Plus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 13264 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 13323 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 13324 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 13383 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 13384 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 13443 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 13444 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 13503 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| | Sbjct: 13504 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggactc 13562 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| |||||| || ||||| || |||| |||| |||| ||||| Sbjct: 13563 tctttgttattccttgaaatttttatttcttgtttcaatcaaattacgatttcgaattct 13622 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 13623 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 13682 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 13683 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 13741 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 13742 ttttatctacatcccctttagttttgcttcacaacttagaatcc 13785 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Plus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 13160 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 13216 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 13217 tatattctatattta 13231
>gb|U54740.1|PRU54740 Pariana radiciflora ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1102 Score = 575 bits (290), Expect = e-161 Identities = 480/538 (89%), Gaps = 11/538 (2%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct--aattc--aat 158 ||||||| ||||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 764 aaaaaatctccttatttg-actcttattgaatcgcggtaaagtattctttaattcttaat 706 Query: 159 aagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttac 218 ||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 705 aaggatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataacctta- 647 Query: 219 caaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattct 278 |||||| ||| |||||||||||||||||||||||||||||| |||| ||||| Sbjct: 646 --aataagncaatttttttggtttgttccgccatcccacccaatgaagtattagaattct 589 Query: 279 tttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatgg 338 || ||| ||||||||||| | ||||||| ||| ||||||||||| ||||||||| ||||| Sbjct: 588 ttccaaaaaaatcctatgcagtcataggctctatcgttcccactacttctcctttaatgg 529 Query: 339 ttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcag 398 ||||||||||||||| ||| ||||||| |||||||||||||||||||| ||||||||||| Sbjct: 528 ttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctcag 469 Query: 399 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 458 |||| |||||||| || ||||||||||||||||| ||||||||| ||||| ||||||||| Sbjct: 468 tttttttaacccgagctgctctttattattgcttcaaatttgtatttcttgtttcaagtt 409 Query: 459 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 518 || |||| ||||||||||| |||| ||||||||||||||| | ||||||||||||||| Sbjct: 408 acgatttcaaattctctatta-tttttttatattgatgctttattacattgccttttatg 350 Query: 519 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 578 |||||| |||||||||||||| | |||||| ||||||||| ||| ||||||||| |||| Sbjct: 349 atgtaactcatagaccatacatattggaatcctatatctttctta-ttcctcttctttct 291 Query: 579 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||| Sbjct: 290 ttctatcatccctccttttatccacat-cctttagttttgcttcacaacctagaatcc 234 Score = 65.9 bits (33), Expect = 2e-07 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | |||||| |||| |||||||||| |||||||||||||||||||| Sbjct: 843 atctagaatatat-ctagatgtctgtgtctatttatctatattctatatttatagataat 785 Query: 89 a 89 | Sbjct: 784 a 784
>gb|DQ289159.1| Oryza granulata L ribosomal protein L16 (rpl16) gene, partial cds; chloroplast Length = 1142 Score = 567 bits (286), Expect = e-158 Identities = 469/528 (88%), Gaps = 12/528 (2%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 764 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 705 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaa-----taagacaann 232 |||||||||||||||||||||||||||||| |||| |||| |||| |||| ||| Sbjct: 704 atttactctttcctgtcttatttgttaattcataaccttatcaaatcaaataaggcaatt 645 Query: 233 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 292 ||||||||||||||||||||| |||||||| || ||||||||||||| ||||||| Sbjct: 644 tttttggtttgttccgccatcccacc-aatgaagtattgggattcttttcaagaaaatcc 586 Query: 293 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 352 ||| | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 585 tatccagtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatct 526 Query: 353 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 412 ||||| |||||||||||||||||||||||||||| || |||||||||||||||||||||| Sbjct: 525 cgcaatggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaacccgg 467 Query: 413 gcggctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttc 468 | ||||||| ||||||||| ||||||||| ||||| || |||| |||| |||| Sbjct: 466 gacgctctttgttattgcttgaaatttgtatttcttgtttcaatcaaattacgatttcga 407 Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct: 406 attctctgttatttttattatattgatgctttatcacattgctttttatgatgtaattca 347 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| |||||| ||||||||||||||||||||| Sbjct: 346 tagaccatacatattggaatcctatatctttcttattt-ctcttccttctttctatcatc 288 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 | ||| ||||||||||||||||| ||||||||||||||| |||||||| Sbjct: 287 cttccttttatccacatcccttttgttttgcttcacaacttagaatcc 240 Score = 40.1 bits (20), Expect = 8.9 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | || ||||| || |||||||||| |||||||||||| Sbjct: 871 atctagaatatat-ctaggtgtgtatgtttatttatctatattctatattta 821
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 559 bits (282), Expect = e-156 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 23180661 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 23180602 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 23180601 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 23180542 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 23180541 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 23180482 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 23180481 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 23180422 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 23180421 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 23180363 Query: 418 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 23180362 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 23180303 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 23180302 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 23180243 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 23180242 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 23180184 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 23180183 ttttatctacatcccctttagttttgcttcacaacttagaatcc 23180140 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 23180765 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 23180709 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 23180708 tatattctatattta 23180694
>dbj|AP004236.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417D05 Length = 165752 Score = 559 bits (282), Expect = e-156 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 131309 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 131250 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 131249 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 131190 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 131189 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 131130 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 131129 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 131070 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 131069 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 131011 Query: 418 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 131010 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 130951 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 130950 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 130891 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 130890 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 130832 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 130831 ttttatctacatcccctttagttttgcttcacaacttagaatcc 130788 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 131413 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 131357 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 131356 tatattctatattta 131342
>dbj|AP003623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0642B07 Length = 139297 Score = 559 bits (282), Expect = e-156 Identities = 465/524 (88%), Gaps = 7/524 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 15423 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 15364 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| | |||||||||| Sbjct: 15363 atttactctttcctgtcttatttgttaattcataaccttatcgaataagacaattttttt 15304 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 15303 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 15244 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | | ||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 15243 agtaataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 15184 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || ||||||| |||||||||| |||| || Sbjct: 15183 tggagcttccaaaaaatttctttccgagtcaa-tttctcacttttattaactcgggacgc 15125 Query: 418 tctttattattgcttaaaatttgtagttc----ttctttcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||| ||| |||| |||| |||| ||||| Sbjct: 15124 tctttgttattccttgaaatttgtatttctcgtttcaatcaaattacgatttcgaattct 15065 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 15064 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 15005 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 15004 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14946 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 14945 ttttatctacatcccctttagttttgcttcacaacttagaatcc 14902 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 15527 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 15471 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 15470 tatattctatattta 15456
>gb|AY847091.1| Gynerium sagittatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1184 Score = 557 bits (281), Expect = e-155 Identities = 469/532 (88%), Gaps = 14/532 (2%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| | |||||| ||||||| ||||||| |||||||||||||| Sbjct: 749 tttttattcttattgaatcgtg-taaagttttctaatccaataaggatttcgcgggcgaa 691 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || |||||||||||| ||| Sbjct: 690 tatttactctttcctgtcttatttgttaatttagaaccttaccaaataaagcaatttttt 631 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 630 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 571 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 570 cagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 511 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | Sbjct: 510 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctg 451 Query: 417 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 476 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 450 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 391 Query: 477 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 524 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 390 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 331 Query: 525 ttcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttctat 584 ||||||| ||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 330 ttcataggccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 272 Query: 585 catccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||| |||||| ||||||||||||||||||||||||||||||||||| Sbjct: 271 catccctccttttatcgacatccctttagttttgcttcacaacctagaatcc 220
>gb|AF133463.1|AF133463 Sucrea maculata ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 555 bits (280), Expect = e-155 Identities = 469/532 (88%), Gaps = 8/532 (1%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 162 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 774 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 716 Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 715 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 656 Query: 223 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 282 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 655 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 602 Query: 283 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 601 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 542 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 541 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 482 Query: 403 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 462 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 481 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 422 Query: 463 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 522 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 421 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 362 Query: 523 aattcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttct 582 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 361 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 303 Query: 583 atcatccctccctttatccacatccctttagttttgcttcacaacctagaat 634 ||||||||||| ||||||||||||| |||||||||||||||||||||||||| Sbjct: 302 atcatccctccttttatccacatccttttagttttgcttcacaacctagaat 251
>dbj|AK071967.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013084G06, full insert sequence Length = 1764 Score = 553 bits (279), Expect = e-154 Identities = 440/493 (89%), Gaps = 6/493 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 491 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 432 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 431 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 372 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 311 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 252 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 251 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 193 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14 Query: 594 ctttatccacatc 606 |||||| ||||| Sbjct: 13 ttttatctacatc 1 Score = 42.1 bits (21), Expect = 2.2 Identities = 63/75 (84%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || ||| |||| Sbjct: 605 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatctatc 549 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 548 tatattctatattta 534
>gb|AY847088.1| Loudetia simplex ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1028 Score = 549 bits (277), Expect = e-153 Identities = 464/526 (88%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 705 tccttatttttattcttattgaatcgtgataaagtattctaatccaataaagatttcgcg 646 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 645 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 586 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| ||||||||||||| || ||||| Sbjct: 585 gttttttggtttgttccgccatcccacccaatgaagtattaggattctttttaaaaaaat 526 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 525 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 466 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 465 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 406 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 405 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 351 Query: 471 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 530 | | ||||| |||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 350 tttttatta-ttttattatattgatgctttatcacattgccttttatgatgtaattcata 292 Query: 531 gaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatccc 590 ||||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||||||||| Sbjct: 291 gaccatacacattggaatcctatatctttctta-ttcgtcttccttctatctatcatccc 233 Query: 591 tccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||| ||||||||||||| ||||||||||||| |||| ||||||||| Sbjct: 232 tccttttatccacatccttttagttttgctttacaagctagaatcc 187
>gb|AF133488.1|AF133488 Pharus lappulaceus ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1182 Score = 547 bits (276), Expect = e-152 Identities = 462/521 (88%), Gaps = 4/521 (0%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 ||||||||||||||||||| | ||||||||||||||| |||||| |||||||||||||| Sbjct: 732 tttttactcttattgaatcacagtaaagtattctaatccaataaagatttcgcgggcgaa 673 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||| | ||||||||| |||||||||||| ||| Sbjct: 672 tatttactctttcctgtcttattcatcaatttataaccttaccaaataaagcaatttttt 613 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctat 295 |||||||||||||||||||||||||||||| ||||||||| |||| || |||||| ||| Sbjct: 612 tggtttgttccgccatcccacccaatgaagtattaggattcgtttttaagaaaatcttat 553 Query: 296 ggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgc 355 | | ||||||||||||||||||||||||||||||| | |||||||||||||||| ||||| Sbjct: 552 gcagtcataggttctgtcgttcccactgcttctccattaatggttaggtctgaaccccgc 493 Query: 356 aacggagcttccaa-aaaatttctttccgagttaattttctcagttttattaacccgggc 414 || ||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 492 aatggagcttccaacaaaatttctttccgagtcaattttctcagttttattaacccaggc 433 Query: 415 ggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 474 ||||||||||||| ||| || | || ||||| ||||||||||| |||| |||||| Sbjct: 432 tgctctttattatttcttttaa-tcctatttcttgtttcaagttacgatttcgaattctc 374 Query: 475 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 534 ||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct: 373 agttatttttattatattgatgctttatcacattgccttttatgatgtaattcatagacc 314 Query: 535 atacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccc 594 ||||| | |||||| ||||||||| ||| ||||| ||| ||||||||||||||||||| Sbjct: 313 atacatattggaatcctatatctttctta-ttcctattctttctttctatcatccctcca 255 Query: 595 tttatccacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||||||||||||||||||||| |||| Sbjct: 254 tttatccacatccctttagttttgcttcacaacctataatc 214
>dbj|AK104024.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-E05, full insert sequence Length = 485 Score = 539 bits (272), Expect = e-150 Identities = 433/486 (89%), Gaps = 6/486 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 484 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 425 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 424 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 365 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 364 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 305 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 304 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 245 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 244 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 186 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| | ||| || |||| |||| |||| ||||| Sbjct: 185 tctttgttattccttgaaatttgtattccttgtttcaatcaaattacgatttcgaattct 126 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 || ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 125 ctgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 66 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 65 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 7 Query: 594 ctttat 599 ||||| Sbjct: 6 ttttat 1
>gb|AY847100.1| Chasmanthium sessiliflorum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1142 Score = 537 bits (271), Expect = e-149 Identities = 438/495 (88%), Gaps = 7/495 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 689 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 630 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 629 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 570 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 569 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 510 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 509 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 450 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 449 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 390 Query: 448 tctttcaagttacaatttttcattctctattagt------tttattatattgatgctttt 501 | ||||||||||| |||| ||||||| || | ||||||||||||||||||| Sbjct: 389 tgtttcaagttacgatttcgaattctctcttttttttttatttattatattgatgcttta 330 Query: 502 tcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatt 561 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| | Sbjct: 329 tcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttct 270 Query: 562 tatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgctt 621 || ||| |||||||||| |||||||||||||| ||||||| ||||||||||||||||||| Sbjct: 269 ta-ttcttcttccttctatctatcatccctccttttatccccatccctttagttttgctt 211 Query: 622 cacaacctagaatcc 636 ||||||||||||||| Sbjct: 210 cacaacctagaatcc 196
>gb|AY847074.1| Merxmuellera macowanii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1077 Score = 535 bits (270), Expect = e-149 Identities = 456/520 (87%), Gaps = 9/520 (1%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||||||||||||||||||||||| |||||||||||||||| |||||| |||||||| Sbjct: 746 tccttatttttactcttattgaatcatggtaaagtattctaatccaataaagatttcgcg 687 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 686 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 627 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 626 ttttgggggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 567 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 566 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 507 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 506 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 447 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 |||| ||||||||||||| ||| |||||| || || || |||||||||| |||| || Sbjct: 446 gggctgctctttattatttctttaaatttttatttattgtttcaagttatgatttcaaat 387 Query: 471 tctctattagttttatt--------atattgatgctttttcacattgccttttatgatgt 522 ||||| || ||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 386 tctctcttttttttattattttattatattgatgctttatcacattgccttttatgatgt 327 Query: 523 aattcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttct 582 ||||||||||||||||||| |||||| |||||| | ||| || |||||||| ||| Sbjct: 326 aattcatagaccatacacattggaatcctatattattatta-ttatgattccttctatct 268 Query: 583 atcatccctccctttatccacatccctttagttttgcttc 622 ||||||||||| |||||||||||||| ||||||||||||| Sbjct: 267 atcatccctccttttatccacatcccgttagttttgcttc 228
>gb|AY847099.1| Chasmanthium laxum rpl16 gene, intron; chloroplast Length = 1165 Score = 525 bits (265), Expect = e-146 Identities = 437/496 (88%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 710 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 651 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 650 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 591 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 590 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 531 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 530 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 471 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 470 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 411 Query: 448 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 500 | ||||||||||| |||| ||||||| || ||| ||||||||||||||||| Sbjct: 410 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgatgcttt 351 Query: 501 ttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttat 560 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 350 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 291 Query: 561 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 620 ||| ||| |||||||||| |||||||||||||| ||||||| |||||||||||||||| | Sbjct: 290 tta-ttcttcttccttctatctatcatccctccttttatccccatccctttagttttgtt 232 Query: 621 tcacaacctagaatcc 636 |||||||||||||||| Sbjct: 231 tcacaacctagaatcc 216
>gb|AY847084.1| Pennisetum setaceum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1016 Score = 525 bits (265), Expect = e-146 Identities = 464/532 (87%), Gaps = 13/532 (2%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 747 tccttatttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 688 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 687 ggcgaatatttactctttcctgtcttatttgttaatttagaatcttatcaaataaagcaa 628 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 627 tttttttggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 568 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 || ||| ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 567 ccgatgtcgtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 508 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| |||||||||||||||||| || | Sbjct: 507 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattgacgc 448 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 |||| ||||||| ||||| ||| |||||| | || || ||||||||||| |||| || Sbjct: 447 gggctgctcttttttatttctttaaattttgattttttatttcaagttacgatttcgaat 388 Query: 471 tctctattagtttta--------ttatattgatgctttttcacattgc----cttttatg 518 ||||| || ||||| ||||||||||||||| | ||||||| ||||||| Sbjct: 387 tctctcttttttttattattttattatattgatgctttataacattgctttttttttatg 328 Query: 519 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 578 ||||||||||||||||||||||| |||||||||||||||| ||| ||| |||||||||| Sbjct: 327 atgtaattcatagaccatacacattggaattctatatctttctta-ttcttcttccttct 269 Query: 579 ttctatcatccctccctttatccacatccctttagttttgcttcacaaccta 630 |||||||||||||| ||||||||||||||||||||||||||||||| |||| Sbjct: 268 atctatcatccctccttttatccacatccctttagttttgcttcacagccta 217
>gb|AF133482.1|AF133482 Chasmanthium laxum ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1195 Score = 525 bits (265), Expect = e-146 Identities = 461/527 (87%), Gaps = 15/527 (2%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||||||| |||||| |||||| |||||||||||||| Sbjct: 760 tttttattcttattgaatcgcggtg-----ttctaagccaataaagatttcgcgggcgaa 706 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 |||||||||||||||||||||||||||||||||||| |||||||||||| |||| Sbjct: 705 tatttactctttcctgtcttatttgttaatttataaccttaccaaataaaacaatttttt 646 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 645 tggtttgtttcgccatcccacccaatgaagtattaggattcttttcaataaaatcctatg 586 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | |||||| |||| ||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 585 cagtcatagattct--cgttcccacagcttctcctttaatggttaggtttgaatcctgca 528 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 527 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccaggctg 468 Query: 417 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 476 |||||| ||||||||| |||||| || || || ||||||||||| |||| ||||||| Sbjct: 467 ctcttttttattgctttaaatttttatttattgtttcaagttacgatttcgaattctctc 408 Query: 477 ttagttt-------tattatattgatgctttttcacattgccttttatgatgtaattcat 529 || ||| ||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 407 ttttttttttattttattatattgatgctttatcacattgccttttatgatgtaattcat 348 Query: 530 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatcc 589 |||||||||||| |||||| ||||||||| ||| ||| |||||||||| |||||||||| Sbjct: 347 agaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatcatcc 289 Query: 590 ctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||| ||||||| |||||||||||||||| ||||||||||||||||| Sbjct: 288 ctccttttatccccatccctttagttttgtttcacaacctagaatcc 242
>gb|AY912215.1| Temochloa liliana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1149 Score = 521 bits (263), Expect = e-145 Identities = 461/528 (87%), Gaps = 11/528 (2%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||||||||||| ||||| |||||||||||| ||| |||||| |||||||||||||| Sbjct: 739 tttttactcttattaaatcgtggtaaagtattcaaatccaataaagatttcgcgggcgaa 680 Query: 177 tatttactctttcctgtcttatttg--------ttaatttataaacttaccaaataagac 228 |||||||||||| |||||||||||| ||||||||||| |||||||||||| | Sbjct: 679 tatttactctttactgtcttatttgcttatttgttaatttataaccttaccaaataaagc 620 Query: 229 aannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaa 288 || |||||||||||||||||||||||||||||| |||||||||||||||| ||| Sbjct: 619 aatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaa 560 Query: 289 atcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctga 348 |||||||||| ||||||||| |||||||||||| ||||||| || |||| |||||| ||| Sbjct: 559 atcctatggagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttga 500 Query: 349 atcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaac 408 |||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 499 atcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaac 440 Query: 409 ccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttc 468 ||| || |||| ||||||||| || |||||| || || || ||||||||||| ||||| Sbjct: 439 ccgagctgctccttattattgttttaaatttttatttattgtttcaagttacgattttga 380 Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||| | || |||| || |||||||||||| ||||||||||||||||||||| ||||| Sbjct: 379 attctttctt--tttttttttattgatgctttatcacattgccttttatgatgtcattca 322 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||||| ||||| ||||||| | ||| || |||||||||| ||||||||| Sbjct: 321 tagaccatacacataggaatcctatatccttctta-ttattcttccttctatctatcatc 263 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 262 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 215
>gb|AY847073.1| Danthonia spicata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1114 Score = 517 bits (261), Expect = e-143 Identities = 331/354 (93%), Gaps = 2/354 (0%) Strand = Plus / Minus Query: 164 tttcgcgggcgaatatttactcttt-cctgtcttatttgttaatttataaacttaccaaa 222 ||||||||||||||||| ||||||| |||||||| ||||||||||||||| ||||||||| Sbjct: 635 tttcgcgggcgaatatt-actcttttcctgtcttttttgttaatttataaccttaccaaa 577 Query: 223 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 282 |||||||| |||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 576 taagacaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttc 517 Query: 283 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct: 516 aataaaatcctatggagtcataggttctgtcgttcccactgcttctccttgaatggttag 457 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 456 gtctgaatcccgcaatggagcttccaaaaaatttctttccgagttaattttctcagtttt 397 Query: 403 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 462 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| | Sbjct: 396 attaacccgggcggctctttattattgctttaaatttgtagttcttgtttcaagttacga 337 Query: 463 tttttcattctctattagttttattatattgatgctttttcacattgcctttta 516 ||| ||||||| ||| |||||||||||||||||||| ||||||||||||||| Sbjct: 336 tttcgaattctctgttatttttattatattgatgctttatcacattgcctttta 283 Score = 147 bits (74), Expect = 5e-32 Identities = 74/74 (100%) Strand = Plus / Minus Query: 565 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 624 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 252 ttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcac 193 Query: 625 aacctagaatccca 638 |||||||||||||| Sbjct: 192 aacctagaatccca 179 Score = 89.7 bits (45), Expect = 1e-14 Identities = 96/111 (86%), Gaps = 9/111 (8%) Strand = Plus / Minus Query: 45 agatgtgtgtggatatttatctaaattctatatttatagataataatgtagtccttct-- 102 ||||||||||| ||||||||| ||||||| |||||||||||| ||| ||||||| Sbjct: 741 agatgtgtgtgtccatttatctatattctat-tttatagataat---gtaatccttctta 686 Query: 103 ---aaaaaatatccttatttttactcttattgaatcgcggtaaagtattct 150 ||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 685 aaaaaaaaatctccttatttttactcttattgaatcgcggtaaagtattct 635
>gb|AC120991.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0006J12, complete sequence Length = 157069 Score = 513 bits (259), Expect = e-142 Identities = 462/525 (88%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 145293 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 145234 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 145233 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 145174 Query: 238 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 145173 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 145114 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 145113 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 145054 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 145053 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 144996 Query: 417 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 472 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 144995 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 144936 Query: 473 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 532 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 144935 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 144876 Query: 533 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctc 592 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 144875 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 144817 Query: 593 cctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 | |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 144816 cttttatctacatcccctttagttttgcttcacaacttagaatcc 144772 Score = 48.1 bits (24), Expect = 0.036 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | |||||||| || |||||||||| |||||||||||| Sbjct: 145376 atctagaatatat-ctagatgtgtatgtttatttatctatattctatattta 145326
>gb|AC104708.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1174_H11, complete sequence Length = 102567 Score = 513 bits (259), Expect = e-142 Identities = 462/525 (88%), Gaps = 9/525 (1%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 4480 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 4421 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||| ||||||||||||||||| |||| |||| |||||||||||| Sbjct: 4420 atttactctttcatgtcttatttgttaattcataaccttatcaaataagacaattttttt 4361 Query: 238 -ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||||||||||||||||||||||||| || ||||| ||||||| |||||||||| Sbjct: 4360 tggtttgttccgccatcccacccaatgaagtattgggatttttttcaagaaaatcctatc 4301 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | |||||||||||||| |||||||||||||||||| ||||||||||| |||||| |||| Sbjct: 4300 cagtcataggttctgtcattcccactgcttctcctttaatggttaggtttgaatctcgca 4241 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| || |||||||| ||||||||| | || | Sbjct: 4240 atggagcttccaaaaaatttctttccgagtcaa-tttctcag-tttattaactcaggacg 4183 Query: 417 ctctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattc 472 |||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| |||| Sbjct: 4182 ctctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattc 4123 Query: 473 tctattagttttattatattgatgctttttcacattgccttttatgatgtaattcataga 532 | | ||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||| Sbjct: 4122 tttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcataga 4063 Query: 533 ccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctc 592 ||||||| | |||||| ||||||||| | | ||| |||||||||||||||||||||| || Sbjct: 4062 ccatacatattggaatcctatatctt-tcttttttctcttccttctttctatcatccttc 4004 Query: 593 cctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 | |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 4003 cttttatctacatcccctttagttttgcttcacaacttagaatcc 3959 Score = 48.1 bits (24), Expect = 0.036 Identities = 46/52 (88%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | |||||||| || |||||||||| |||||||||||| Sbjct: 4563 atctagaatatat-ctagatgtgtatgtttatttatctatattctatattta 4513
>gb|AY847089.1| Tristachya biseriata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1150 Score = 511 bits (258), Expect = e-142 Identities = 459/526 (87%), Gaps = 7/526 (1%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| | ||||||||||| | |||||||||||||| |||||| ||||||| Sbjct: 736 tccttatttttatttttattgaatcgtgataaagtattctaatccaataaagatttcgca 677 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||| | ||||||||||||||||||||| |||||||||||| ||| Sbjct: 676 ggcgaatatttactcttttcngtcttatttgttaatttataaccttaccaaataaagcaa 617 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||| ||||||||||| ||||||||||||| |||||||| Sbjct: 616 tttttttggtttgttccgccatcccgcccaatgaagtattaggattctttttaataaaat 557 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 556 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 497 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 496 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 437 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcat 470 |||| ||||||| ||||||||| || || || || ||||||||| | | || || | Sbjct: 436 gggctgctcttttttattgctttaattt-----tttttgtttcaagtttcgaattctctt 382 Query: 471 tctctattagttttattatattgatgctttttcacattgccttttatgatgtaattcata 530 | | ||||| |||| |||| |||||||||| ||||||||||||||||||||||||||||| Sbjct: 381 tttttatta-tttttttattttgatgctttatcacattgccttttatgatgtaattcata 323 Query: 531 gaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatccc 590 ||||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||||||||| Sbjct: 322 gaccatacacattggaatcctatatctttctta-ttcttcttccttctatctatcatccc 264 Query: 591 tccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||| ||||||||||||||||||||||||||| |||| ||||||||| Sbjct: 263 tccttttatccacatccctttagttttgctttacaagctagaatcc 218
>gb|AY912206.1| Hickelia madagascariensis ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1108 Score = 509 bits (257), Expect = e-141 Identities = 395/441 (89%), Gaps = 13/441 (2%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 836 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 778 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatcgcggtaaag 144 ||| || |||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttcttaacaaaaaatctccttatttttactcttattgaatcgcggtaaag 721 Query: 145 tattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgtta 204 |||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| Sbjct: 720 tattctaattcaataaagatttcgcgggcgaaaatttactctttcctgtcttatttgtta 661 Query: 205 atttata-----aacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||| | ||||||||||||| ||| |||||||||||||||||||||| Sbjct: 660 atttatattataaccttaccaaataaggcaatttttttggtttgttccgccatcccaccc 601 Query: 260 aatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgttccc 319 |||||||| |||||||||||||||| ||||||||||| | ||||||||| |||||||||| Sbjct: 600 aatgaagtattaggattcttttcaagaaaatcctatgcagtcataggttttgtcgttccc 541 Query: 320 actgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctt 379 ||| ||||||||| |||||||||||||||||||| ||| ||||||||||||||||||||| Sbjct: 540 actacttctcctttaatggttaggtctgaatcccacaatggagcttccaaaaaatttctt 481 Query: 380 tccgagttaattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||| |||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 480 tccgagtcaattttctcagttttattaacccgggcggctctttattattgttttaaattt 421 Query: 440 gtagttcttctttcaagttac 460 ||| ||||| ||||||||||| Sbjct: 420 gtatttcttgtttcaagttac 400 Score = 121 bits (61), Expect = 3e-24 Identities = 121/139 (87%), Gaps = 3/139 (2%) Strand = Plus / Minus Query: 498 tttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatc- 556 ||||||||||||| ||||||||||||| |||||||||||||| | |||||| | ||||| Sbjct: 347 tttttcacattgctttttatgatgtaactcatagaccatacatattggaatcccatatca 288 Query: 557 ttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagttt 616 ||| ||| ||| || ||||||||||||||||||| ||||||||||| || ||||||| Sbjct: 287 ttacgnattccct--tctttctttctatcatccctccttttatccacatgcccttagttt 230 Query: 617 tgcttcacaacctagaatc 635 |||||||||| |||||||| Sbjct: 229 tgcttcacaagctagaatc 211
>gb|AY847090.1| Isachne arundinacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1101 Score = 502 bits (253), Expect = e-139 Identities = 463/532 (87%), Gaps = 10/532 (1%) Strand = Plus / Minus Query: 112 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 171 ||||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||| Sbjct: 714 ccttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgg 655 Query: 172 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 231 |||||| |||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 654 gcgaatttttactctttcctgtcttatttgttaatttataa-cttaccaaataaagcaat 596 Query: 232 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 291 ||||||||||||||||||| | |||||||| ||||||||||||||||||||||| Sbjct: 595 ttttttggtttgttccgccatcccatctaatgaagtattaggattcttttcaataaaatc 536 Query: 292 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 351 ||||| ||||||||| |||||||||||| |||||||||| |||| |||||| |||||| Sbjct: 535 ctatgctgtcataggttttgtcgttcccacagcttctcctttaatgtttaggtttgaatc 476 Query: 352 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 411 | |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| || Sbjct: 475 ctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacacg 416 Query: 412 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 471 ||| ||| |||||||||||| ||||| | || || ||||| ||||| |||| ||| Sbjct: 415 ggctactccttattattgcttttaattt-ttttttttgtttcaggttactatttcgaatt 357 Query: 472 ctctattagttttattatattga-------tgctttttcacattgccttttatgatgtaa 524 |||| ||| ||||||||| || | |||||| ||||||||||||||||| ||||| Sbjct: 356 ctctcttatttttattattttaatatattgtgctttatcacattgccttttatggtgtaa 297 Query: 525 ttcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttctat 584 | ||||||||||||||| ||||| ||||||||| ||| ||| ||||| |||| ||||| Sbjct: 296 tccatagaccatacacataggaatcctatatctttctta-ttcttcttctttctatctat 238 Query: 585 catccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 237 catccctccttttatccacatccctttagttttgcttcacaacctagaatcc 186
>gb|AY847085.1| Arundinella hirta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 494 bits (249), Expect = e-136 Identities = 461/531 (86%), Gaps = 21/531 (3%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| |||||||||||||||| || |||||||||||||| Sbjct: 740 tttttattcttattgaatcgtggtaaagtattctaat------aggatttcgcgggcgaa 687 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || ||| ||||||| ||| Sbjct: 686 tatttactctttcctgtcttatttgttaatttagaactttatcaaataaagcaatttttt 627 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 626 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 567 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 566 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 507 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| ||||||||||||||||||||||| ||| | Sbjct: 506 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctg 448 Query: 417 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 476 |||||| ||||||||| | |||| || || || ||||||||||| |||| ||||||| Sbjct: 447 ctcttttttattgctttatatttttatttgttgtttcaagttacgatttcgaattctctc 388 Query: 477 ttagtttta--------ttatattgatgctttttcacattgcc----ttttatgatgtaa 524 || ||||| ||||||||||||||| |||||||||| ||||||||||||| Sbjct: 387 ttttttttattattttattatattgatgctttatcacattgccttttttttatgatgtaa 328 Query: 525 ttcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttctat 584 ||||||| ||||||||| |||||| ||||||||| ||| ||| |||||||||| ||||| Sbjct: 327 ttcatag-ccatacacattggaatcctatatctttctta-ttcttcttccttctatctat 270 Query: 585 catccctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||| ||||||||||||||||||||||||||||||| ||||||||| Sbjct: 269 catccctccttttatccacatccctttagttttgcttcacagcctagaatc 219
>gb|AY847096.1| Bromuniola gossweileri rpl16 gene, intron; chloroplast Length = 557 Score = 488 bits (246), Expect = e-134 Identities = 432/496 (87%), Gaps = 8/496 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 521 tctaatccaataaagatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 462 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| || |||||||| ||||||||||||||||||||| Sbjct: 461 tataaccttaccaaataaagcattttttttggtttgtttcgccatcccacccaatgaagt 402 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 401 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 342 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 341 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 282 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||||| ||| ||||||| ||||||||| |||||| || || | Sbjct: 281 aattttctcagttttattaaccctggctgctcttttttattgctttaaatttttatttat 222 Query: 448 tctttcaagttacaatttttcattctctattagttt-------tattatattgatgcttt 500 | ||||||||||| |||| ||||||| || ||| ||||||||||| ||||| Sbjct: 221 tgtttcaagttacgatttcgaattctctctttttttttttatttattatattgaggcttt 162 Query: 501 ttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttat 560 |||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| Sbjct: 161 atcacattgccttttatgatgtaattcatagaccatacacattggaatcctatatctttc 102 Query: 561 ttatttcctcttccttctttctatcatccctccctttatccacatccctttagttttgct 620 ||| ||| |||||||||| ||||| |||||||| ||||||| ||||| |||||||||| | Sbjct: 101 tta-ttcttcttccttctatctatnatccctccttttatccccatccttttagttttgtt 43 Query: 621 tcacaacctagaatcc 636 ||||||||| ||||| Sbjct: 42 ccacaacctaaaatcc 27
>gb|AY847107.1| Zeugites hackelii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1073 Score = 486 bits (245), Expect = e-134 Identities = 419/479 (87%), Gaps = 9/479 (1%) Strand = Plus / Minus Query: 165 ttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaata 224 ||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||||| Sbjct: 698 ttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaata 639 Query: 225 agacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaa 284 | | | |||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 638 aagccatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaa 579 Query: 285 taaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggt 344 ||||||||||| | ||||||||| | |||||||||| |||||||||| ||||||||||| Sbjct: 578 taaaatcctatccagtcataggttttttcgttcccacagcttctcctttaatggttaggt 519 Query: 345 ctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttat 404 ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 518 ttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttat 459 Query: 405 taacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatt 464 |||||||||| ||||||| ||||||||| |||||| || || || ||||||||||| ||| Sbjct: 458 taacccgggctgctcttttttattgcttgaaatttttatttattgtttcaagttacgatt 399 Query: 465 tttcattctctattagttttattat--------attgatgctttttcacattgcctttta 516 | ||||||| || |||| |||| ||||||||||| ||||||||||||||| Sbjct: 398 tcgaattctctcttttttttcttattttattatattgatgctttatcacattgcctttta 339 Query: 517 tgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcctt 576 ||||||||||||||||||||||||| |||||| ||||||||| ||| ||| | |||||| Sbjct: 338 tgatgtaattcatagaccatacacattggaatcctatatctttctta-ttctttttcctt 280 Query: 577 ctttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatc 635 || ||||||||||||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 279 ctacctatcatccctccttttatccacatccctttagttttgtttcacaacctagaatc 221
>gb|AY847080.1| Sporobolus indicus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1023 Score = 484 bits (244), Expect = e-133 Identities = 466/542 (85%), Gaps = 19/542 (3%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 166 ||||||||| |||||| ||||||||||| ||||||||||||||| |||||| |||| Sbjct: 744 aatatccttttttttaaccttattgaatcatagtaaagtattctaatccaataaagattt 685 Query: 167 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 226 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 684 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 625 Query: 227 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 286 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 624 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 565 Query: 287 aaatc----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 ||||| ||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 564 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 505 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 || ||||||| |||| |||||||||||| |||| ||||||||||||||||||||| Sbjct: 504 gtttgaatcctgcaatggagcttccaaa------cttttcgagttaattttctcagtttt 451 Query: 403 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 462 ||||| |||||| ||||||||||||||||| |||||| || || || |||||| |||| | Sbjct: 450 attaatccgggctgctctttattattgctttaaatttttatttattgtttcaaattacga 391 Query: 463 tttttcattctctattagt--------tttattatattgatgctttttcacattgccttt 514 ||| ||||||| ||| | ||||||||||||||||||| ||||||||||||| Sbjct: 390 tttaaaattctctcttatttttattattttattatattgatgctttatcacattgccttt 331 Query: 515 tatgatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttcc 574 |||||||||||||||||||||| || | |||||| |||||||| ||| ||| |||||| Sbjct: 330 tatgatgtaattcatagaccatccatattggaatcttatatctttctta-ttcttcttcc 272 Query: 575 ttctttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaat 634 ||||||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||| Sbjct: 271 ttctttctatcatccctccttttatccacatccgtttagttttctttcacaacctagaat 212 Query: 635 cc 636 || Sbjct: 211 cc 210
>gb|U54741.1|SMU54741 Sucrea maculata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1030 Score = 482 bits (243), Expect = e-133 Identities = 426/487 (87%), Gaps = 8/487 (1%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataaga 162 ||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||| Sbjct: 734 aaaaaatctccttatttg-actcttattgaatcacagtaaagtattctaattcaataagg 676 Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 222 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 675 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaa 616 Query: 223 taagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttc 282 |||||||| ||||||||||||||||| |||||||||||| |||| || | Sbjct: 615 taagacaatttttttggtttgttccgccatcctacccaatgaagtattagaat------c 562 Query: 283 aataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 || | ||| ||||| | ||||||||||| ||||||||||| ||||||||| ||||||||| Sbjct: 561 aaaagaattctatgcagtcataggttctatcgttcccactacttctcctttaatggttag 502 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 ||||||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 501 gtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 442 Query: 403 attaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaa 462 |||||| || | |||| |||||||||||| ||||||||| ||||| ||||||||||| | Sbjct: 441 attaactcgagttgctccttattattgctttaaatttgtatttcttgtttcaagttacga 382 Query: 463 tttttcattctctattagttttattatattgatgctttttcacattgccttttatgatgt 522 ||| ||||||||||| ||| |||||||||||||||| | ||||||||||||||||||| Sbjct: 381 tttcgaattctctattattttgattatattgatgctttattacattgccttttatgatgt 322 Query: 523 aattcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttct 582 || ||||||||||||| || || | ||||||||| ||| ||||||||||| |||||| Sbjct: 321 aacccatagaccatacataggagagtcctatatctttctta-ttcctcttcctgctttct 263 Query: 583 atcatcc 589 ||||||| Sbjct: 262 atcatcc 256 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 603 catccctttagttttgcttcacaacctagaat 634 ||||| |||||||||||||||||||||||||| Sbjct: 260 catccttttagttttgcttcacaacctagaat 229
>gb|AY847075.1| Karroochloa purpurea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1053 Score = 480 bits (242), Expect = e-132 Identities = 450/519 (86%), Gaps = 7/519 (1%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||| ||||||||||| ||| |||||| |||||||||||||| Sbjct: 722 tttttagtcttattgaattatagtaaagtattcgaatccaataaatatttcgcgggcgaa 663 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 |||||||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct: 662 tatttactctttcctgtcttatttgttaatttataattttaccaaataaagcaagttttg 603 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||||||||||||||||| |||| || |||||||||||||||||||||||||||| Sbjct: 602 gggtttgttccgccatcccacccgatgatgtattaggattcttttcaataaaatcctatg 543 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| ||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 542 cagtcataggttttgtcgttcccatagcttctcctttaatggttaggtttgaatcctgca 483 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||| | Sbjct: 482 atggagcttcaaaaaaatttcttttcgagttaattttctcagttttattaacccgggctg 423 Query: 417 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 476 |||||||||||| ||| ||||| | | || |||||||||||||||| ||||||| Sbjct: 422 ctctttattatttctttcaattttgattagttgtttcaagttacaatttcaaattctctc 363 Query: 477 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 536 || |||| |||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 362 tt--tttt----tattgatgctttatcacattgccttttatgatgtaattcatagaccat 309 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 |||| |||||| ||||||| | ||| || |||||||||| |||||||||||||| || Sbjct: 308 acacgttggaatcctatatccttctta-ttattcttccttctatctatcatccctccttt 250 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||||| |||| ||||| |||||||||||||||| Sbjct: 249 tatccacatccttttacttttgtttcacaacctagaatc 211
>gb|AF133490.1|AF133490 Streptochaeta angustifolia ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1243 Score = 470 bits (237), Expect = e-129 Identities = 466/538 (86%), Gaps = 10/538 (1%) Strand = Plus / Minus Query: 106 aaatatccttatttttactcttattgaatcgcggtaaagta-----ttctaattcaataa 160 |||| ||||||||||||||||||||||||| |||||||||| || |||| |||||| Sbjct: 807 aaatctccttatttttactcttattgaatcacggtaaagtaaagtattgtaatccaataa 748 Query: 161 gaatttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttacca 220 ||||||||||||||||||||||||||||||||||||| || |||| | || ||||||| Sbjct: 747 agatttcgcgggcgaatatttactctttcctgtcttattcgtcaattcaaaaccttacca 688 Query: 221 aataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-tt 279 ||||| ||| |||||||||||||||||||||||||||||| ||||||||| || Sbjct: 687 aataaagcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcgtt 628 Query: 280 ttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggt 339 ||||||||||||||||| | |||||||||||||||||||||| |||||||| |||||| Sbjct: 627 ttcaataaaatcctatgtagtcataggttctgtcgttcccacagcttctccactaatggt 568 Query: 340 taggtctgaatcccgcaacggagcttccaa-aaaatttctttccgagttaattttctcag 398 |||||||||| || |||| ||||||||||| ||||||||||||||||| |||||||||| Sbjct: 567 taggtctgaaccctgcaatggagcttccaacaaaatttctttccgagtccattttctcag 508 Query: 399 ttttattaacccgggcggctctttattattgcttaaaatttgtagttcttctttcaagtt 458 |||||||||||| || ||||||||||||| ||| | || || ||||| ||||||||| Sbjct: 507 ttttattaacccaggttgctctttattatttcttttca-ttctatttcttgtttcaagtt 449 Query: 459 acaatttttcattctctattagttttattatattgatgctttttcacattgccttttatg 518 || |||| |||||| ||| || ||||||||||||||||| ||||| ||||||||||| Sbjct: 448 acgatttggaattctcagttatttatattatattgatgctttatcacactgccttttatg 389 Query: 519 atgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttct 578 ||||||||||| ||||||||| | |||||| ||||||||| ||| ||||| ||| |||| Sbjct: 388 atgtaattcatggaccatacatattggaatcctatatctttctta-ttcctgttctttct 330 Query: 579 ttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||| |||||||||||||||||| ||||||||| ||||||||||||| Sbjct: 329 ttctatcatccctccatttatccacatcccttta-ttttgcttcgcaacctagaatcc 273
>gb|AY847076.1| Aristida purpurea var. curvifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1112 Score = 468 bits (236), Expect = e-128 Identities = 450/520 (86%), Gaps = 4/520 (0%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||||||||||| ||||| | |||||||||| ||| |||||| ||||||||||| || Sbjct: 725 tttttactcttattaaatcgtg-taaagtattcaaatccaataaagatttcgcgggcaaa 667 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 |||||||||||| ||||||||||||||||||||||| |||||||||||| ||| Sbjct: 666 tatttactctttactgtcttatttgttaatttataaccttaccaaataaagcaatttttt 607 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||| Sbjct: 606 tggtttgttccgccatcccacccaatgaagtattaggattcttttcaaaaaaatcctatg 547 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 || ||||||||| |||||||||||| ||||||| || |||| |||||| ||||||| ||| Sbjct: 546 gagtcataggttttgtcgttcccacagcttctcttttaatgcttaggtttgaatcctgca 487 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | |||||||||||||||||||||||||||| |||||||||||||||||||||||| || | Sbjct: 486 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgagctg 427 Query: 417 ctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctcta 476 ||| ||||||||| || |||||| || || || ||||||||||| ||||| ||||| | Sbjct: 426 ctccttattattgttttaaatttttatttattgtttcaagttacgattttgaattctttc 367 Query: 477 ttagttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccat 536 || |||| || | |||||||||| ||||||||||||||||||||| |||||||| |||| Sbjct: 366 tt--ttttttttttttgatgctttatcacattgccttttatgatgtcattcatagcccat 309 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||| || | ||| || |||||||||| | |||||||||||| || Sbjct: 308 acacataggaatcctaagtccttctta-ttattcttccttctatgtatcatccctccttt 250 Query: 597 tatccacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||||| |||||||| ||||||| Sbjct: 249 tatccacatccctttagttttggttcacaacggagaatcc 210
>gb|AF133464.1|AF133464 Lithachne pauciflora ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1189 Score = 468 bits (236), Expect = e-128 Identities = 449/520 (86%), Gaps = 8/520 (1%) Strand = Plus / Minus Query: 122 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 181 |||||||||||||||| ||||||| ||| | ||||||||| ||||||||||||||||||| Sbjct: 758 actcttattgaatcgcagtaaagttttccacttcaataaggatttcgcgggcgaatattt 699 Query: 182 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 241 |||||||||| |||||||||||||||||||| ||||| ||||||||||| |||| Sbjct: 698 actctttcctatcttatttgttaatttataaccttactaaataagacaatttttttggtt 639 Query: 242 tgttccgccatcccaccc--aatgaagtgttaggattcttttcaataaaatcctatggaa 299 |||||||||||||| ||| ||||||| |||| ||||||||||| ||||| |||| | Sbjct: 638 tgttccgccatccctcccctaatgaagaattagaattcttttcaaaaaaattctatacag 579 Query: 300 tcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacg 359 ||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||| | Sbjct: 578 tcataggttctatcgttcccactacttctcctttaatggttaggtctgaattccacaatg 519 Query: 360 gagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctc 419 ||| ||||||||||| |||||| |||| ||||||||||||||||||||||| | |||| Sbjct: 518 gagtttccaaaaaatatctttctgagtcaattttctcagttttattaaccccagttgctc 459 Query: 420 tttat-----tattgcttaaaatttgtagttcttctttcaagttacaatttttcattctc 474 |||| ||||||||||||||| || ||||| ||||||||||| |||| |||||| Sbjct: 458 cttattattgtattgcttaaaatttatatttcttgtttcaagttacgatttcaaattctc 399 Query: 475 tattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagacc 534 || || |||||||||||||||||||| | ||||||||||||||||||||| ||||||||| Sbjct: 398 taatatttttattatattgatgctttattacattgccttttatgatgtaactcatagacc 339 Query: 535 atacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccc 594 ||||| ||| | ||| ||||| ||| ||||||||||||||||||||||||||||| Sbjct: 338 atacatgtgggagtcctacatctttatta-ttcctcttccttctttctatcatccctcct 280 Query: 595 tttatccacatccctttagttttgcttcacaacctagaat 634 ||||||||||||| |||||||||||||||||||| ||||| Sbjct: 279 tttatccacatccttttagttttgcttcacaacccagaat 240
>gb|AF133479.1|AF133479 Eleusine indica ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1091 Score = 456 bits (230), Expect = e-125 Identities = 461/539 (85%), Gaps = 21/539 (3%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 782 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 723 Query: 178 atttactctttcctgtcttatttgttaatttataaactt------accaaataagacaan 231 |||||||||||| |||||||||||||||||||||| ||| | ||||||| |||| Sbjct: 722 atttactctttcttgtcttatttgttaatttataaccttattaaaatcaaataaaacaat 663 Query: 232 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 291 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 662 ttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatc 603 Query: 292 ----ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctg 347 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| || Sbjct: 602 aatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttg 543 Query: 348 aatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaa 407 ||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||| Sbjct: 542 aatcctgcaacggagcttccaaacttaaactttccgagttaattttcttagttttattaa 483 Query: 408 cccgggcggctctttattattgcttaaaatttgtagttcttctttc--aagttacaattt 465 || |||| |||||||||||||||||||||||| || || || |||| || ||| |||| Sbjct: 482 cctgggctgctctttattattgcttaaaatttttatttattgtttcaaaaattatgattt 423 Query: 466 ttcattctctattagttttatta--------tattgatgctttttcacattgccttttat 517 | ||||||| ||| |||||||| |||||||||||| |||||||||||||||| Sbjct: 422 taaattctctcttatttttattattttattatattgatgctttatcacattgccttttat 363 Query: 518 gatgtaattcatagaccatacacagtggaattctatatcttatttatttcctcttccttc 577 |||||||||||||||||||||||| |||||| |||||||| ||| ||| ||||||||| Sbjct: 362 gatgtaattcatagaccatacacattggaatcttatatctttctta-ttcttcttccttc 304 Query: 578 tttctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 | |||||||||||||| |||||||||||||||||||||||| ||||||||||||||||| Sbjct: 303 tatctatcatccctccttttatccacatccctttagttttgtttcacaacctagaatcc 245
>gb|AF133481.1|AF133481 Chloris distichophylla ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1180 Score = 452 bits (228), Expect = e-124 Identities = 441/513 (85%), Gaps = 21/513 (4%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 |||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||| Sbjct: 766 ttttacccttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaat 707 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||| |||||||||||||||||||||| |||| |||||||||||| Sbjct: 706 atttactctttcttgtcttatttgttaatttataaccttatcaaataagacaattttttt 647 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataa----aatcct 293 |||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||| Sbjct: 646 ggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaatcaatcct 587 Query: 294 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 353 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 586 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 527 Query: 354 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 413 ||||||||| ||||||| ||||||||||||||||||| ||||||||||||| ||| Sbjct: 526 gcaacggagtttccaaa------ctttccgagttaattttcttagttttattaacctggg 473 Query: 414 cggctctttattattgcttaaaatttgtagttcttctttc--aagttacaatttttcatt 471 | ||||||||||||||||| |||||| || || || |||| || |||| ||||| ||| Sbjct: 472 ctgctctttattattgcttcaaatttttatttattgtttcaaaaattacgattttaaatt 413 Query: 472 ctctattagtttt--------attatattgatgctttttcacattgccttttatgatgta 523 |||| ||| |||| |||||||||||||||| |||||||||||||||||||||| Sbjct: 412 ctctcttatttttattattttattatattgatgctttatcacattgccttttatgatgta 353 Query: 524 attcatagaccatacacagtggaattctatatcttatttatttcctcttccttctttcta 583 |||||||||||||||||| |||||| |||||||| ||| ||| |||||||||| |||| Sbjct: 352 attcatagaccatacacattggaatcttatatctttctta-ttcttcttccttctatcta 294 Query: 584 tcatccctccctttatccacatccctttagttt 616 |||||||||| ||||||||||||||||| |||| Sbjct: 293 tcatccctccttttatccacatcccttttgttt 261 Score = 174 bits (88), Expect = 2e-40 Identities = 140/156 (89%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 395 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 336 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| |||||||| ||||| | |||||||||| |||||||||||||| |||||| Sbjct: 335 attggaatcttatatctttcttatt-cttcttccttctatctatcatccctccttttatc 277 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||| |||| ||||||||||||||| Sbjct: 276 cacatcccttttgttt-----cacaacctagaatcc 246
>gb|AY847109.1| Zeugites munroanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 952 Score = 450 bits (227), Expect = e-123 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| |||||||||| |||| |||||||||||||| |||||||||||||| Sbjct: 593 tctaatccaataaagatttcgcgggggaatgtttactctttcctgccttatttgttaatt 534 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatctagtcataggttttttcgttcccacagcttc 414 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 354 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgcttgaaatttttatttat 294 Query: 448 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 503 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcaaattctctctttttttttcttattatattgatgctttatc 234 Query: 504 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 563 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 233 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctttctta 174 Query: 564 tttcctcttccttctttctatcatccctccctttatccacatccctttagttt 616 ||| | |||||||| ||||||||||||| ||||||||||||||||| |||| Sbjct: 173 -ttctttttccttctacctatcatccctccttttatccacatcccttttgttt 122
>gb|AY847108.1| Zeugites mexicanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1056 Score = 450 bits (227), Expect = e-123 Identities = 411/473 (86%), Gaps = 5/473 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 703 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 644 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 643 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 584 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 583 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 524 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 523 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 464 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 463 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 404 Query: 448 tctttcaagttacaatttttcattctctattagtttt----attatattgatgctttttc 503 | ||||||||||| |||| ||||||| || |||| |||||||||||||||| || Sbjct: 403 tgtttcaagttacgatttcgaattctctctttttttttctaattatattgatgctttatc 344 Query: 504 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 563 |||||||||||||||||||||||||||||||||||||| ||||| ||||||||| ||| Sbjct: 343 acattgccttttatgatgtaattcatagaccatacacatgggaatcctatatctttctta 284 Query: 564 tttcctcttccttctttctatcatccctccctttatccacatccctttagttt 616 ||| | |||||||| ||||||||||||| ||||||||||||||||| |||| Sbjct: 283 -ttctttttccttctacctatcatccctccttttatccacatcccttttgttt 232
>gb|AY847110.1| Zeugites pringlei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1060 Score = 446 bits (225), Expect = e-122 Identities = 425/492 (86%), Gaps = 9/492 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 707 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgttaatt 648 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 || || |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 647 taaaatcttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 588 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 587 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 528 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 527 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 468 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 467 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 408 Query: 448 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 503 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 407 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 348 Query: 504 acattgccttttatgatgtaattcatagaccatacacagtggaattctatatcttattta 563 |||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| Sbjct: 347 acattgccttttatgatgtaattcatagaccatacacattggaatactatatctttctta 288 Query: 564 tttcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttca 623 ||| | |||||||| ||||||||||||| |||||||||||||| ||||| |||| Sbjct: 287 -ttctttttccttctacctatcatccctccttttatccacatccc----cttttgtttca 233 Query: 624 caacctagaatc 635 |||||||||||| Sbjct: 232 caacctagaatc 221
>gb|AY847077.1| Stipagrostis zeyheri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1146 Score = 442 bits (223), Expect = e-121 Identities = 395/452 (87%), Gaps = 12/452 (2%) Strand = Plus / Minus Query: 194 cttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatc 253 ||||||||||||||||||| || ||||||||| ||| |||||||||||||||| Sbjct: 669 cttatttgttaatttataatct-accaaataaagcaatttttttggtttgttccgccatc 611 Query: 254 ccacccaatgaagtgttaggattcttttcaataaaa--tcctatggaatcataggttctg 311 |||||||||||||| |||||||||||||||| |||| ||||||| | ||||||||| || Sbjct: 610 ccacccaatgaagtattaggattcttttcaaaaaaaaatcctatgcagtcataggttttg 551 Query: 312 tcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaa 371 |||||||||| |||||||||| ||||||||||| ||||||| |||| ||||||||||||| Sbjct: 550 tcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaa 491 Query: 372 aatttctttccgagttaattttctcagttttattaacccgggcggctctttattattgct 431 ||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||| Sbjct: 490 aatttctttccgagtcaattttctcagttttattaacccgagctgctctttattattgct 431 Query: 432 taaaatttgtagttcttctttcaagttacaatttttcattctctattagttt-------- 483 | |||||| || || || |||||||||| ||||| ||||| | ||| ||| Sbjct: 430 ttaaatttttattttttgtttcaagttatgattttgaattctttcttatttttaatattt 371 Query: 484 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 543 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | | Sbjct: 370 tattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacatatt 311 Query: 544 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 603 ||||| ||||||| | ||| ||| |||||||||| |||||||||||||| ||||||||| Sbjct: 310 ggaatcctatatccttctta-ttcttcttccttctatctatcatccctccttttatccac 252 Query: 604 atccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||||||||||||||||| Sbjct: 251 atccctttagttttgcttcacaacctagaatc 220 Score = 69.9 bits (35), Expect = 1e-08 Identities = 41/43 (95%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaata 159 |||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 712 tttttactcttattgaatcgtggtaaagtattctaatccaata 670
>gb|AF133484.1|AF133484 Phragmites australis ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1199 Score = 432 bits (218), Expect = e-118 Identities = 292/319 (91%) Strand = Plus / Minus Query: 114 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 173 ||||||||||||||||||||||| |||||||||||||||| |||||| ||||||||||| Sbjct: 777 ttatttttactcttattgaatcgtggtaaagtattctaatccaataaagatttcgcgggc 718 Query: 174 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 233 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct: 717 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataagacaattt 658 Query: 234 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 293 |||||||||||||||||||||||||||||| ||||||||||||| ||||||||||| Sbjct: 657 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttgaataaaatcct 598 Query: 294 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 353 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 597 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcct 538 Query: 354 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 413 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 537 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 478 Query: 414 cggctctttattattgctt 432 |||| |||||||||||| Sbjct: 477 ttgctccttattattgctt 459 Score = 230 bits (116), Expect = 5e-57 Identities = 147/156 (94%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 398 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 339 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 338 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 280 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||||||||||||||||||| Sbjct: 279 cacatccctttagttttgcttcacaacctagaatcc 244
>gb|AY847104.1| Zeugites sylvaticus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1051 Score = 430 bits (217), Expect = e-117 Identities = 359/406 (88%), Gaps = 9/406 (2%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct: 597 ggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatcc 538 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 537 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 478 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 477 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 418 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 477 ||||| ||||||||| ||||| || || || ||||||||||| |||| ||||||| | Sbjct: 417 tcttttttattgcttgcaatttttatttattgtttcaagttacgatttcgaattctctct 358 Query: 478 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 529 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 357 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 298 Query: 530 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatcc 589 |||||||||||| |||||| ||||||||| ||| ||| | |||||||| ||||||||| Sbjct: 297 agaccatacacattggaatcctatatctttctta-ttctttttccttctacctatcatcc 239 Query: 590 ctccctttatccacatccctttagttttgcttcacaacctagaatc 635 |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 238 ctccttttatccacatccctttagttttgtttcacaacctagaatc 193 Score = 107 bits (54), Expect = 5e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||| |||||||||| ||||||||||||||||||||||| ||||| Sbjct: 686 tctaatccaataaaaatttagcgggcgaatgtttactctttcctgtcttatttggtaatt 627 Query: 208 tataaacttaccaaataa 225 ||||| |||||||||||| Sbjct: 626 tataaccttaccaaataa 609
>dbj|AK059459.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-028-C07, full insert sequence Length = 352 Score = 430 bits (217), Expect = e-117 Identities = 307/338 (90%), Gaps = 1/338 (0%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 337 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 278 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 277 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 218 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 217 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 158 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 157 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 98 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| || |||||||||||||||||| |||| || Sbjct: 97 tggagcttccaaaaaatttctttccgagtcaa-tttctcagttttattaactcgggacgc 39 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaa 455 ||||| ||||| ||| ||||||||| ||||| |||||| Sbjct: 38 tctttgttattccttgaaatttgtatttcttgtttcaa 1
>gb|AY847098.1| Chasmanthium latifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1132 Score = 428 bits (216), Expect = e-116 Identities = 424/491 (86%), Gaps = 6/491 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||||||||||| | || ||| | |||| |||| Sbjct: 679 tctaatccaataaagatttcgcgggcgaatatttactcatgccagtcct--ttgt-aatt 623 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 |||| |||||||||||| ||| || | | ||||||||||||||||||||||| Sbjct: 622 gataaccttaccaaataaagcaatttttttggctaggtccgccatcccacccaatgaagt 563 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 562 attaggattcttttcaataaaatcctatgcagtcataggttttctcgttcccacagcttc 503 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| |||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 502 tcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 443 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||||| ||| ||||||| ||||||||| ||||| || || | Sbjct: 442 aattttctcagttttattaacccaggctgctcttttttattgctttcaatttttatttat 383 Query: 448 tctttcaagttacaatttttcat--tctctattagttttattatattgatgctttttcac 505 | |||||||||||||||| || ||||| || |||||||||||||||||||| |||| Sbjct: 382 tgtttcaagttacaatttcgaattctctcttttttttttattatattgatgctttatcac 323 Query: 506 attgccttttatgatgtaattcatagaccatacacagtggaattctatatcttatttatt 565 |||||||||||||||||||||||||||||||||||| |||||| ||||||||| | | | Sbjct: 322 attgccttttatgatgtaattcatagaccatacacattggaatcctatatctt-tcttct 264 Query: 566 tcctcttccttctttctatcatccctccctttatccacatccctttagttttgcttcaca 625 || |||||||||| ||| |||||||||| ||||| | |||||||||||| |||||||||| Sbjct: 263 tcttcttccttctatctctcatccctccttttatgcccatccctttagtgttgcttcaca 204 Query: 626 acctagaatcc 636 ||||||||||| Sbjct: 203 acctagaatcc 193
>gb|AY847106.1| Zeugites capillaris ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1062 Score = 406 bits (205), Expect = e-110 Identities = 356/406 (87%), Gaps = 9/406 (2%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct: 623 ggtttgttccgccatcccacccaatgaagtattaggatttttttcaataaaatcctatcc 564 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||| |||||||||||| |||||||||| |||||||||| ||||||| |||| Sbjct: 563 agtcataggttttgtcgttcccacagcttctcctttaatggttaggcttgaatcctgcaa 504 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 503 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 444 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctctat 477 ||||| ||||||||| ||||| || || || |||||||| || |||| ||||||| | Sbjct: 443 tcttttttattgcttgcaatttttatttattgtttcaagtgacgatttcgaattctctct 384 Query: 478 tagttttattat--------attgatgctttttcacattgccttttatgatgtaattcat 529 | |||| |||| ||||||||||| |||||||||||||||||||||||||||| Sbjct: 383 tttttttcttattttattatattgatgctttatcacattgccttttatgatgtaattcat 324 Query: 530 agaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatcc 589 |||||||||||| |||||| ||||||||| ||| ||| | |||||||| ||||||||| Sbjct: 323 agaccatacacattggaatcctatatctttctta-ttctttttccttctacctatcatcc 265 Query: 590 ctccctttatccacatccctttagttttgcttcacaacctagaatc 635 |||| |||||||||||||||||||||||| |||||||||||||||| Sbjct: 264 ctccttttatccacatccctttagttttgtttcacaacctagaatc 219 Score = 101 bits (51), Expect = 3e-18 Identities = 60/63 (95%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaa 222 ||||||||||||||| ||||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttggtaatttataaccttaccaaa 637 Query: 223 taa 225 ||| Sbjct: 636 taa 634
>gb|AF133486.1|AF133486 Molinia caerulea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1211 Score = 406 bits (205), Expect = e-110 Identities = 291/322 (90%) Strand = Plus / Minus Query: 114 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 173 ||||||||||||||||||||||| |||||||||| |||| |||||| ||||||||||| Sbjct: 779 ttatttttactcttattgaatcgtggtaaagtatcttaatccaataaagatttcgcgggc 720 Query: 174 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 233 ||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 719 gaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaattt 660 Query: 234 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 293 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct: 659 ttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcct 600 Query: 294 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 353 ||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| | Sbjct: 599 atgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaattct 540 Query: 354 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 413 |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| || Sbjct: 539 gcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccccgg 480 Query: 414 cggctctttattattgcttaaa 435 |||| ||||||||||||||| Sbjct: 479 ttgctccttattattgcttaaa 458 Score = 230 bits (116), Expect = 5e-57 Identities = 147/156 (94%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 340 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 282 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 |||||||||||||||||||||||||||||||||||| Sbjct: 281 cacatccctttagttttgcttcacaacctagaatcc 246
>gb|AE009947.2| Saccharum hybrid cultivar SP-80-3280 chloroplast, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 1320 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 1379 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 1380 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 1439 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 1440 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 1499 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 1500 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 1559 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 1560 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 1619 Query: 411 gggcggctcttta-ttattgcttaaaatttgt 441 ||| |||||||| ||||||||| | |||||| Sbjct: 1620 -ggctgctctttatttattgctttatatttgt 1650 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 1704 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 1763 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 1764 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 1822 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 1823 tatccagatccctttagttttgcttcacagcctagaatc 1861
>dbj|AP006714.1| Saccharum officinarum chloroplast DNA, complete genome Length = 141182 Score = 402 bits (203), Expect = e-109 Identities = 300/332 (90%), Gaps = 2/332 (0%) Strand = Plus / Plus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||| |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||| Sbjct: 80877 tccttttttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcg 80936 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80937 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 80996 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 80997 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 81056 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 81057 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 81116 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 81117 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc 81176 Query: 411 gggcggctcttta-ttattgcttaaaatttgt 441 ||| |||||||| ||||||||| | |||||| Sbjct: 81177 -ggctgctctttatttattgctttatatttgt 81207 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 81261 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 81320 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 81321 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 81379 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 81380 tatccagatccctttagttttgcttcacagcctagaatc 81418
>gb|AF133459.1|AF133459 Ehrharta calycina ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1192 Score = 398 bits (201), Expect = e-108 Identities = 299/334 (89%) Strand = Plus / Minus Query: 122 actcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatattt 181 |||| ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 746 actcctattgaatcacggtaaagtattctaattcaataaggatttcgcgggcgaatattt 687 Query: 182 actctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtt 241 |||||||||||||||||||||||||| |||| |||| |||||||||||| |||| Sbjct: 686 actctttcctgtcttatttgttaattcataaccttatcaaataagacaatttttttggtt 627 Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 |||||||||||||||||||||||||| |||||||||||||||||||||||||||| | || Sbjct: 626 tgttccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtc 567 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 || |||||||||||||||| |||||||| | |||| |||||| | ||| ||||| ||| Sbjct: 566 atgagttctgtcgttcccacagcttctcccttaatgattaggtttaaatttcgcaatgga 507 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 |||| |||||||||||||||||||| |||| | |||||||||||||||||| | |||||| Sbjct: 506 gctttcaaaaaatttctttccgagtcaattctatcagttttattaacccggaccgctctt 447 Query: 422 tattattgcttaaaatttgtagttcttctttcaa 455 ||||||||||||||||||||| ||||| |||||| Sbjct: 446 tattattgcttaaaatttgtatttcttgtttcaa 413 Score = 151 bits (76), Expect = 3e-33 Identities = 137/156 (87%), Gaps = 6/156 (3%) Strand = Plus / Minus Query: 486 ttatattgatgctttttcacattgccttttatg-----atgtaattcatagaccatacac 540 ||||||||||||||| |||||||||||||||| || |||||||||||||||||| Sbjct: 386 ttatattgatgctttatcacattgccttttattttattatttaattcatagaccatacat 327 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| |||||| |||||||||||||||||||| |||| |||||| Sbjct: 326 attggaatcctatatctttcttattta-tcttccttctttctatcatctctccttttatc 268 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||| ||||| |||||||||||||||||| Sbjct: 267 cacatcccttttgttttacttcacaacctagaatcc 232 Score = 42.1 bits (21), Expect = 2.2 Identities = 43/49 (87%), Gaps = 1/49 (2%) Strand = Plus / Minus Query: 32 tagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 |||||||||| | ||||||||| | |||||||||| |||||||||||| Sbjct: 836 tagaatatat-ctagatgtgtgcgtttatttatctatattctatattta 789
>gb|AY847082.1| Andropogon gerardii ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1186 Score = 392 bits (198), Expect = e-106 Identities = 316/355 (89%), Gaps = 2/355 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 ||||| |||||| ||||||||||||| | |||||||||||||| ||||||| |||||||| Sbjct: 754 tccttttttttattcttattgaatcgtg-taaagtattctaatccaataaggatttcgcg 696 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 695 ggcgaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa 636 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 tttttttggtttgttccgccatcccacccaatgaagtgttaggattctttccaataaaat 576 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 575 cctatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 516 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||||||| | Sbjct: 515 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttattaactc 456 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 465 ||| ||||||| ||||||||| | |||| || || || ||||||||||| |||| Sbjct: 455 -ggctgctcttttttattgctttatatttatatttgttgtttcaagttacgattt 402 Score = 129 bits (65), Expect = 1e-26 Identities = 136/158 (86%), Gaps = 5/158 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcc----ttttatgatgtaattcatagaccat 536 |||||||||||||||||||| | |||||||| ||||||||| ||||||||||||||| Sbjct: 377 ttttattatattgatgctttataacattgccctttttttatgatttaattcatagaccat 318 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| | || ||| |||||||| | | ||||||||||| || Sbjct: 317 acacatcggaatcctatatctt-tctaattcttcttccttttataaatcatccctccttt 259 Query: 597 tatccacatccctttagttttgcttcacaacctagaat 634 |||||||||||||||||||||| || ||| |||||||| Sbjct: 258 tatccacatccctttagttttggtttacagcctagaat 221
>ref|XM_481019.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 381 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 325 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 324 tatattctatattta 310
>ref|XM_507181.1| PREDICTED Oryza sativa (japonica cultivar-group), OSJNBa0036E18.24 mRNA Length = 2157 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 381 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 325 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 324 tatattctatattta 310
>gb|AY847079.1| Merxmuellera rangei ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1166 Score = 385 bits (194), Expect = e-103 Identities = 293/327 (89%), Gaps = 1/327 (0%) Strand = Plus / Minus Query: 113 cttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcggg 172 ||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 736 cttatttttactcttattgaatcatggtaaagtattctaattcaataaagatt-cgcggg 678 Query: 173 cgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaann 232 ||||||||||||||||||||||||||||| ||||||| || |||||||||||| || Sbjct: 677 cgaatatttactctttcctgtcttatttggtaatttagaatcttaccaaataaagtaatt 618 Query: 233 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcc 292 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||| Sbjct: 617 tttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaatacaatcc 558 Query: 293 tatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcc 352 |||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| Sbjct: 557 tatgtagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcc 498 Query: 353 cgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgg 412 |||| |||||||||||||||| ||||||||||| ||||||||||||||||||| ||||| Sbjct: 497 tgcaatggagcttccaaaaaatatctttccgagtcaattttctcagttttattaccccgg 438 Query: 413 gcggctctttattattgcttaaaattt 439 || |||||||||||||| || |||||| Sbjct: 437 gctgctctttattattggtttaaattt 411 Score = 204 bits (103), Expect = 3e-49 Identities = 143/155 (92%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 372 ttttattatattgatgctttatcacattgccttttatgatgtaattcataaaccatacac 313 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| || |||||||||| |||||||||||||| |||||| Sbjct: 312 attggaatcctatatctttctta-ttattcttccttctatctatcatccctccttttatc 254 Query: 601 cacatccctttagttttgcttcacaacctagaatc 635 ||||||| ||||||||||||||||||||||||||| Sbjct: 253 cacatccttttagttttgcttcacaacctagaatc 219
>ref|XM_479424.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 380 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 324 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 323 tatattctatattta 309
>ref|XM_479423.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2154 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 380 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 324 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 323 tatattctatattta 309
>dbj|AK105308.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-B12, full insert sequence Length = 2166 Score = 385 bits (194), Expect = e-103 Identities = 253/275 (92%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 276 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 217 Query: 178 atttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnn 237 |||||||||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct: 216 atttactctttcctgtcttatttgttaattcataaccttatcaaataagacaattttttt 157 Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||||||||||||||||||||||||||| ||||||||||| |||||| ||||| Sbjct: 96 agtcataggttctgtcgttcccactgcttctcctttaatggttaggtttgaatctcgcaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||||||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccgagtcaattt 2 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 390 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 334 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 333 tatattctatattta 319
>gb|AY847087.1| Danthoniopsis petiolata ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1147 Score = 383 bits (193), Expect = e-103 Identities = 289/322 (89%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | |||||||||||||| |||||| |||||||| Sbjct: 732 tccttatttttattcttattgaatcgtg-taaagtattctaatccaataaagatttcgcg 674 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 673 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 614 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| ||||||||||||| | |||||| Sbjct: 613 tttttttggtttgttccgccatcccacccaatgaagtattaggattctttttactaaaat 554 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| ||||||| || ||||||||||| ||||| Sbjct: 553 cctatgcagtcataggttttgtcgttcccacagcttctcttttaatggttaggtttgaat 494 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 493 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 434 Query: 411 gggcggctctttattattgctt 432 |||| ||||||| ||||||||| Sbjct: 433 gggctgctcttttttattgctt 412 Score = 167 bits (84), Expect = 6e-38 Identities = 141/156 (90%), Gaps = 3/156 (1%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||| |||| || |||| |||||||||||| Sbjct: 368 ttttattatattgatgctttatcacattgccttt-atga-gttattcctagaccatacac 311 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||||| | |||||||||| |||||||||||||| |||||| Sbjct: 310 attggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttttatc 252 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||| |||| ||||||||| Sbjct: 251 cacatccctttagttttgctttacaagctagaatcc 216
>dbj|AP005675.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1001_G09 Length = 118018 Score = 379 bits (191), Expect = e-102 Identities = 354/404 (87%), Gaps = 7/404 (1%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 76818 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 76759 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 76758 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 76699 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 76698 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 76640 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 76639 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 76580 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 76579 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 76520 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 76519 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 76461 Query: 594 ctttatccacat-ccctttagttttgcttcacaacctagaatcc 636 |||||| |||| |||||||||||||||||||||| |||||||| Sbjct: 76460 ttttatctacatcccctttagttttgcttcacaacttagaatcc 76417 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 76925 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 76866 Query: 178 atttactctttcctgtcttatttgtta 204 ||||||||||||||||||||||||||| Sbjct: 76865 atttactctttcctgtcttatttgtta 76839 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 77029 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 76973 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 76972 tatattctatattta 76958
>gb|AY847114.1| Spartochloa scirpoidea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1176 Score = 377 bits (190), Expect = e-101 Identities = 309/350 (88%), Gaps = 2/350 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | ||||||||||||| ||||||| ||||||| Sbjct: 754 tccttatttttattcttattgaatcgtg--aaagtattctaatccaataagggtttcgcg 697 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 696 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 637 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 636 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 577 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 576 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 517 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||| ||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 516 cctgcaatggagcttctaaaaaatggatttccgagtcaattttctcagttttattaaccc 457 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttac 460 ||| ||||||| ||||||||| |||||| || || || ||| ||||||| Sbjct: 456 cggctgctcttttttattgctttaaatttttatttattgtttgaagttac 407 Score = 202 bits (102), Expect = 1e-48 Identities = 136/146 (93%), Gaps = 1/146 (0%) Strand = Plus / Minus Query: 490 attgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaatt 549 ||||||||||| |||||||||||||||||||||||||||||| ||||||||| |||||| Sbjct: 368 attgatgctttatcacattgccttttatgatgtaattcatagcccatacacattggaatc 309 Query: 550 ctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccct 609 ||||||||| ||||| | |||||||||| |||||||||||||| ||||||||||||||| Sbjct: 308 ctatatctttcttatt-cttcttccttctatctatcatccctccttttatccacatccct 250 Query: 610 ttagttttgcttcacaacctagaatc 635 |||||||||||||||||||||||||| Sbjct: 249 ttagttttgcttcacaacctagaatc 224
>gb|AY847112.1| Cyperochloa hirsuta ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 931 Score = 377 bits (190), Expect = e-101 Identities = 313/355 (88%), Gaps = 1/355 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | ||||||||| |||| |||||| |||||||| Sbjct: 509 tccttatttttattcttattgaatcgtg-taaagtattttaatccaataaagatttcgcg 451 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 ||||||||||||||||||||||| |||||||||||||||||| |||||||||||| | | Sbjct: 450 ggcgaatatttactctttcctgttttatttgttaatttataaccttaccaaataaagcca 391 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||||||||||||||| |||||||||||||||| ||||| Sbjct: 390 tttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaagaaaat 331 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 330 cctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaat 271 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 270 cctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaaccc 211 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 465 ||| ||||||| || |||||| |||||| || || || ||| ||||||| |||| Sbjct: 210 cggctgctcttttttgttgctttaaatttttatttattgtttgaagttacgattt 156 Score = 157 bits (79), Expect = 5e-35 Identities = 116/127 (91%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 485 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtg 544 |||||||||||||||| |||||||||||||||||||||||||||||||||||||||| || Sbjct: 127 attatattgatgctttatcacattgccttttatgatgtaattcatagaccatacacattg 68 Query: 545 gaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccaca 604 |||| ||||||||| ||| | | ||||||||| |||||||||||||| |||||||||| Sbjct: 67 gaatcctatatctttctta-tccttcttccttcaatctatcatccctccttttatccaca 9 Query: 605 tcccttt 611 ||||||| Sbjct: 8 tcccttt 2
>gb|AY912197.1| Neurolepis nana ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1230 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 |||||||||||||||||||||||||| |||||||||||||||||||||| | |||| Sbjct: 726 atttcgcgggcgaatatttactcttttctgtcttatttgttaatttatattataacctta 667 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 666 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 607 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 606 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 547 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 546 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 487 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 486 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 436 Score = 222 bits (112), Expect = 1e-54 Identities = 155/168 (92%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 426 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 367 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 366 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 308 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 307 cctccttttatccacatccctttagttttgcttcacaacctggaatcc 260 Score = 67.9 bits (34), Expect = 4e-08 Identities = 93/110 (84%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||| ||||| ||||||||| ||| |||||||||||||||| Sbjct: 836 atctagaatatat-ctagatgcgtgtgtctatttatctgtattatatatttatagataat 778 Query: 89 aatgtagtccttctaaaaaata---tccttatttttactcttattgaatc 135 ||| || |||||||||| | ||||||||||||||||||||||||| Sbjct: 777 ---gtaatctttctaaaaaaaaatctccttatttttactcttattgaatc 731
>gb|AY912194.1| Chusquea bambusoides ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1174 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 687 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 628 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 627 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 568 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 567 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 508 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 507 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 448 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 447 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 397 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 387 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 328 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 327 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 269 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 268 cctccttttatccacatccctttagttttgcttcacaacctagaatc 222 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatc 135 |||| |||||||||||||||||||||||||||| Sbjct: 724 aaaatatatccttatttttactcttattgaatc 692 Score = 40.1 bits (20), Expect = 8.9 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| ||||||||| ||| |||||||| Sbjct: 794 atctagaatatat-ctagatgtgtgtgtctatttatctgtattatatattta 744
>gb|U62786.1|COU62786 Chusquea oxylepis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 406 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 336 tagaccatacatattggaatactatatctttcttatt-cctcttctttctttctatcatc 278 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 cctccttttatccacatccctttagttttgcttcacaacctagaatc 231 Score = 65.9 bits (33), Expect = 2e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatc 135 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701 Score = 40.1 bits (20), Expect = 8.9 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| ||||||||| ||| |||||||| Sbjct: 803 atctagaatatat-ctagatgtgtgtgtctatttatctgtattatatattta 753
>gb|U62780.1|CAU62780 Chusquea aff. fendleri ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 377 bits (190), Expect = e-101 Identities = 264/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 404 Score = 220 bits (111), Expect = 4e-54 Identities = 154/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 || || ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cccccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AY847093.1| Thysanolaena latifolia ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1182 Score = 373 bits (188), Expect = e-100 Identities = 319/364 (87%), Gaps = 2/364 (0%) Strand = Plus / Minus Query: 112 ccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgg 171 ||||||||||| ||||||||||||| | |||||||| |||| |||||| ||||||||| Sbjct: 755 ccttatttttattcttattgaatcgtg--aaagtattataatccaataaagatttcgcgg 698 Query: 172 gcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaan 231 | ||| ||||||||||||||||| ||||||||||||||||| |||||||||||| ||| Sbjct: 697 gggaaaatttactctttcctgtcatatttgttaatttataaccttaccaaataaagcaat 638 Query: 232 nnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 291 ||||||||||||||||||| |||||||||| ||||||||||||||||||||||| Sbjct: 637 ttttttggtttgttccgccatcccaaccaatgaagtattaggattcttttcaataaaatc 578 Query: 292 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 351 ||||| | ||||||||| |||||||||||| |||||||||| ||||||||||| |||||| Sbjct: 577 ctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatc 518 Query: 352 ccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccg 411 | |||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct: 517 ctgcaatggagcttccaaaaaatttatttccgagtcaattttctcagttttattaacccg 458 Query: 412 ggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcatt 471 ||| ||||||| ||||||||| ||||| || || || ||| ||||||| ||||| ||| Sbjct: 457 ggctgctcttttttattgctttcaatttttatttattgtttgaagttacgattttgaatt 398 Query: 472 ctct 475 |||| Sbjct: 397 ctct 394 Score = 224 bits (113), Expect = 3e-55 Identities = 147/157 (93%), Gaps = 1/157 (0%) Strand = Plus / Minus Query: 480 gttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccataca 539 |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 380 gtttaattatattgatgctttatcacattgccttttatgatgtaattcatagaccataca 321 Query: 540 cagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttat 599 || |||||| ||||||||| ||| ||| |||||||||| |||||||||||||| ||||| Sbjct: 320 cattggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttat 262 Query: 600 ccacatccctttagttttgcttcacaacctagaatcc 636 ||||||||||||||||||||||||||||||||||||| Sbjct: 261 ccacatccctttagttttgcttcacaacctagaatcc 225
>gb|AY912195.1| Chusquea culeou ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1181 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 692 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 633 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 632 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 573 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 572 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 513 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 512 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 453 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 452 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 402 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 392 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 333 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 332 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 274 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 273 cctccttttatccacatccctttagttttgcttcacaacctagaatc 227 Score = 71.9 bits (36), Expect = 3e-09 Identities = 94/111 (84%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 803 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 745 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 744 ---gtaatctttcttaaaaaaaaatatccttatttttactcttattgaatc 697
>gb|AF133472.1|AF133472 Chusquea ramosissima ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1193 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 718 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 659 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 658 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 599 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 598 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 539 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 538 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 479 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 478 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 428 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 418 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 359 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 358 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 300 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 299 cctccttttatccacatccctttagttttgcttcacaacctagaatc 253 Score = 58.0 bits (29), Expect = 4e-05 Identities = 92/111 (82%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 829 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 771 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| |||||| |||||||||||||||||| Sbjct: 770 ---gtaatctttcttaaaaaaaaatctccttanttttactcttattgaatc 723
>gb|U62793.1|NAU62793 Neurolepis aperta ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1052 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaattcttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||||||||||||||| | ||||||||||||||||||||||| |||||| || |||| Sbjct: 575 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcgtttaatg 516 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 ||||||||||||| || ||| ||||||||||||||| |||||||| ||| |||||||||| Sbjct: 515 gttaggtctgaattccacaatggagcttccaaaaaaattctttccaagtcaattttctca 456 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||||||||||||| ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttaaaatttgtatttctt 405 Score = 214 bits (108), Expect = 3e-52 Identities = 154/168 (91%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | ||||| ||||||||| ||||| ||||||| || ||||||||||| Sbjct: 335 tagaccatacatataggaatcctatatctttcttatt-cctcttctttttttctatcatc 277 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 45 agatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||| ||||| |||| |||||||||||||||||||| Sbjct: 810 agatgtgtgtgtctatttttctatattctatatttatagataat 767 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatc 135 ||||||||||||||||||||||||| Sbjct: 737 tccttatttttactcttattgaatc 713
>gb|U62789.1|CTU62789 Chusquea talamancensis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62788.1|CSU62788 Chusquea spencei ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62787.1|CSU62787 Chusquea sp. A ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| Sbjct: 697 atttcgcgggcgaatatttactctttcctatcttatttgttaatttatattataacctta 638 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 637 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 578 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 |||||||||| |||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 577 ttttcaataagatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 518 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 517 gttaggtctgaatcccacaatggagctttcaaaaaatttctttccgagtcaattttctca 458 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 457 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 407 Score = 220 bits (111), Expect = 4e-54 Identities = 154/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 397 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 338 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| | ||||||| ||||| ||||||| |||||||||||||| Sbjct: 337 tagaccatacatattggaatcccatatctttcttatt-cctcttctttctttctatcatc 279 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 278 cctccttttatccacatccctttagttttgcttcacaacctagaatc 232 Score = 65.9 bits (33), Expect = 2e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatc 135 ||||||||||||||||||||||||||||||||| Sbjct: 734 aaaaaatatccttatttttactcttattgaatc 702 Score = 40.1 bits (20), Expect = 8.9 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| ||||||||| ||| |||||||| Sbjct: 802 atctagaatatat-ctagatgtgtgtgtctatttatctgtattatatattta 752
>gb|U62785.1|COU62785 Chusquea oligophylla ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 |||||||||||| |||||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcggatatttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| ||||||| |||||||||||||||||||| |||||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttacaaaaaatttctttccgagtcaattttctca 457 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 gttttattaacccgggccgctctttattattgcttcaaatttctatttctt 406 Score = 220 bits (111), Expect = 4e-54 Identities = 154/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 396 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 337 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| | ||||||| ||||| ||||||| |||||||||||||| Sbjct: 336 tagaccatacatattggaatcccatatctttcttatt-cctcttctttctttctatcatc 278 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 277 cctccttttatccacatccctttagttttgcttcacaacctagaatc 231 Score = 65.9 bits (33), Expect = 2e-07 Identities = 33/33 (100%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatc 135 ||||||||||||||||||||||||||||||||| Sbjct: 733 aaaaaatatccttatttttactcttattgaatc 701 Score = 40.1 bits (20), Expect = 8.9 Identities = 45/52 (86%), Gaps = 1/52 (1%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatattta 80 ||||||||||||| | ||||||||||| ||||||||| ||| |||||||| Sbjct: 802 atctagaatatat-ctagatgtgtgtgtctatttatctgtattatatattta 752
>gb|U62784.1|CEU62784 Chusquea exasperata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1032 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 805 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 747 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 746 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54752.1|CTU54752 Chusquea tessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54758.1|CSU54758 Chusquea sp. 'LC et al. 1309' ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1035 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 277 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatc 230 Score = 58.0 bits (29), Expect = 4e-05 Identities = 32/33 (96%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatc 135 ||||||| ||||||||||||||||||||||||| Sbjct: 732 aaaaaatctccttatttttactcttattgaatc 700
>gb|U54754.1|CSU54754 Chusquea serpens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 805 atctagaatatat-ctagatgtgtgtgtctatttatccttattatatatttatagataat 747 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 746 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54753.1|CSU54753 Chusquea subtessellata ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54751.1|CRU54751 Chusquea ramosissima ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 805 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 747 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 746 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54760.1|CLU54760 Chusquea liebmannii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1032 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 805 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 747 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 746 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 699
>gb|U54759.1|CCU54759 Chusquea coronalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1031 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtcaattttctca 454 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 275 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 cctccttttatccacatccctttagttttgcttcacaacctagaatc 228 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 698
>gb|U54757.1|CBU54757 Chusquea bilimekii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1033 Score = 369 bits (186), Expect = 8e-99 Identities = 263/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 695 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 636 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 635 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 576 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 575 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 516 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 515 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 456 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 455 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 405 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 395 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 336 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 335 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 277 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 276 cctccttttatccacatccctttagttttgcttcacaacctagaatc 230 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 806 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 748 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 747 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 700
>gb|U62781.1|CSU62781 Chusquea scandens ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 367 bits (185), Expect = 3e-98 Identities = 256/282 (90%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||||||||||||| ||||||||||||||||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaattt 413 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|AF133483.1|AF133483 Zeugites pittieri ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1107 Score = 363 bits (183), Expect = 5e-97 Identities = 263/292 (90%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 742 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 683 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| ||| |||||||||||||||||||||||||||||| Sbjct: 682 tataaccttaccaaataaagcaatttttttggtttgttccgccatcccacccaatgaagt 623 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 ||||||||||||||||||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 622 attaggattcttttcaataaaatcctatccagtcataggttttttcgttcccacagcttc 563 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 562 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 503 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||||||||||||||||||||||| ||||||| ||||||||| |||||| Sbjct: 502 aattttctcagttttattaacccgggctgctcttttttattgcttgaaattt 451 Score = 196 bits (99), Expect = 6e-47 Identities = 142/155 (91%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 400 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 341 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| || | |||||||| ||||||||||||| |||||| Sbjct: 340 attggaatcctatatctttctta-ttatttttccttctacctatcatccctccttttatc 282 Query: 601 cacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||| |||||||||||||||| Sbjct: 281 cacatccctttagttttgtttcacaacctagaatc 247
>gb|U62790.1|CVU62790 Chusquea vulcanalis ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||| ||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttattggttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 454 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U62782.1|CTU62782 Chusquea tomentosa ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1030 Score = 361 bits (182), Expect = 2e-96 Identities = 262/291 (90%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 693 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 634 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 633 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 574 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| |||| |||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 573 ttttcaaaaaaaccctatgcagtcataggttctgtcgttcccactacttctcctttaatg 514 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 513 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 454 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 453 gttttattaacccgggccgctctttattattgcttcaaatttttatttctt 403 Score = 228 bits (115), Expect = 2e-56 Identities = 155/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 393 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 334 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 333 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 275 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 274 cctccttttatccacatccctttagttttgcttcacaacctagaatc 228 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 803 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 745 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 744 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 698
>gb|AY928077.1| Zea mays cultivar B73 chloroplast, complete genome Length = 140454 Score = 359 bits (181), Expect = 7e-96 Identities = 277/309 (89%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80247 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80306 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80307 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaatttttt 80366 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 80367 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 80426 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80427 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80486 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80487 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80543 Query: 417 ctctttatt 425 ||||||||| Sbjct: 80544 ctctttatt 80552 Score = 178 bits (90), Expect = 1e-41 Identities = 143/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 80625 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 80684 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 80685 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 80743 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 80744 tatccacatccctttagttttgcttcacagcctagaatc 80782
>gb|AY912196.1| Neurolepis aristata ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1206 Score = 353 bits (178), Expect = 5e-94 Identities = 261/291 (89%), Gaps = 5/291 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 |||||||||||||| ||||||||||| ||| |||||||||||||||||| | |||| Sbjct: 704 atttcgcgggcgaaaatttactcttttctggcttatttgttaatttatattataacctta 645 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||| | ||||||||| Sbjct: 644 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaaatattaggattc 585 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||||||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 584 ttttcaataaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 525 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 ||||||||||||| || ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 524 gttaggtctgaattccacaatggagcttccaaaaaatttctttccgagtcaattttctca 465 Query: 398 gttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||| ||||||||||||||||| ||||||||| ||||| Sbjct: 464 gttttattaacccgggccgctctttattattgcttcaaatttgtatttctt 414 Score = 218 bits (110), Expect = 2e-53 Identities = 153/166 (92%), Gaps = 1/166 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 404 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 345 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||| ||||||||| |||||||||||||| Sbjct: 344 tagaccatacatattggaatcctatatctttctta-ttcctcttctttctttctatcatc 286 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaat 634 ||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct: 285 cctccttttatccacatccctttagttttgcttcacaacctggaat 240 Score = 60.0 bits (30), Expect = 1e-05 Identities = 92/110 (83%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||| | ||| ||||||||| ||| |||||||||||||||| Sbjct: 814 atctagaatatat-ctagatgcgagtgtctatttatctggattatatatttatagataat 756 Query: 89 aatgtagtccttctaaaaaata---tccttatttttactcttattgaatc 135 ||| || |||||||||| | ||||||||||||||||||||||||| Sbjct: 755 ---gtaatctttctaaaaaaaaatctccttatttttactcttattgaatc 709
>gb|AY847086.1| Danthoniopsis dinteri ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1152 Score = 351 bits (177), Expect = 2e-93 Identities = 285/322 (88%), Gaps = 1/322 (0%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 737 tccttatttttattcttattgaatcgtg-taaagtattctaatctaataaagatttcgcg 679 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 678 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 619 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||| ||||||||||||||||||||||| ||||||||||||| | ||||| Sbjct: 618 tttttttggtttgatccgccatcccacccaatgaagtattaggattctttttcaaaaaat 559 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||||||| |||||||||||| ||||||| || || |||||||| ||||| Sbjct: 558 cctatgcagtcataggttttgtcgttcccacagcttctcttttaaaggttaggtttgaat 499 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct: 498 cctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagttttatcaaccg 439 Query: 411 gggcggctctttattattgctt 432 |||| ||||||| ||||||||| Sbjct: 438 gggctgctcttttttattgctt 417 Score = 182 bits (92), Expect = 1e-42 Identities = 142/156 (91%), Gaps = 2/156 (1%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 ||||||||||| |||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 371 ttttattatatcgatgctttatcacattgccttttatgatgtaattcatagaccatgcac 312 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 311 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 253 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 ||||| ||||||||||||||| |||| ||||||||| Sbjct: 252 cacat-cctttagttttgctttacaagctagaatcc 218
>gb|AF133477.1|AF133477 Zea mays ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1190 Score = 351 bits (177), Expect = 2e-93 Identities = 275/309 (88%), Gaps = 2/309 (0%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 743 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 684 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || | || ||||||| ||| Sbjct: 683 tatttactctttcctgtcttatttgttaatttagaatcctatcaaataaagcaatttttt 624 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 tggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 564 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 563 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 504 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||||| | Sbjct: 503 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaacccggctga 446 Query: 417 ctctttatt 425 ||||||||| Sbjct: 445 ctctttatt 437 Score = 186 bits (94), Expect = 6e-44 Identities = 144/159 (90%), Gaps = 5/159 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct: 365 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcatagaccat 306 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||| | |||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 305 acatattggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 247 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||||||||||||||||||||||| ||||||||| Sbjct: 246 tatccacatccctttagttttgcttcacagcctagaatc 208
>gb|U62791.1|CJU62791 Chusquea juergensii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1059 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 395 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 396 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 202 bits (102), Expect = 1e-48 Identities = 155/171 (90%), Gaps = 5/171 (2%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 529 tagaccatacacag----tggaattctatatcttatttatttcctcttccttctttctat 584 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 585 catccctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 catccctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 811 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 753 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 752 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|U54756.1|CPU54756 Chusquea pinifolia ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1038 Score = 351 bits (177), Expect = 2e-93 Identities = 263/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 700 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 641 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 640 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 581 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 580 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 521 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 395 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 520 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 461 Query: 396 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 460 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 408 Score = 202 bits (102), Expect = 1e-48 Identities = 155/171 (90%), Gaps = 5/171 (2%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 398 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 339 Query: 529 tagaccatacacag----tggaattctatatcttatttatttcctcttccttctttctat 584 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||| Sbjct: 338 tagaccatacatacatattggaatcctatatctttcttatt-cctcttctttctttctat 280 Query: 585 catccctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 279 catccctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 811 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 753 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 752 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 705
>gb|AY847083.1| Paspalum conjugatum ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1157 Score = 349 bits (176), Expect = 7e-93 Identities = 305/352 (86%), Gaps = 10/352 (2%) Strand = Plus / Minus Query: 114 ttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggc 173 ||||||||| ||||||||||||| |||||||||| |||| ||||||||||| Sbjct: 733 ttatttttattcttattgaatcgtggtaaagtat----------taaggatttcgcgggc 684 Query: 174 gaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannn 233 |||||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 683 gaatatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattt 624 Query: 234 nnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 293 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 623 ttttggtttgctccgccatcccacccaatgaagtgttaggattcttttcaataaaatcct 564 Query: 294 atggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatccc 353 ||| | ||||||||| |||||||||||| |||||||||| ||||| ||||| ||||||| Sbjct: 563 atgcagtcataggttttgtcgttcccacagcttctcctttaatggctaggtttgaatcct 504 Query: 354 gcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccggg 413 |||| |||||||| |||||||| |||||||||| |||||||||||||||||||||||||| Sbjct: 503 gcaatggagcttcaaaaaaattgctttccgagtcaattttctcagttttattaacccggg 444 Query: 414 cggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 465 | ||||||| ||||||||| ||||| || || || ||||||||||| |||| Sbjct: 443 ctgctcttttttattgctttcaatttttatttgttgtttcaagttacgattt 392 Score = 178 bits (90), Expect = 1e-41 Identities = 135/148 (91%), Gaps = 4/148 (2%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 537 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 370 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 311 Query: 538 cacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcccttt 597 |||| |||||| |||||||| ||||| | |||||||||| |||||||||||||| ||| Sbjct: 310 cacattggaatcctatatctctcttatt-cttcttccttctatctatcatccctcctttt 252 Query: 598 atccacatccctttagttttgcttcaca 625 |||||||||||||||||||||||||||| Sbjct: 251 atccacatccctttagttttgcttcaca 224
>gb|AY847078.1| Eragrostis curvula ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1163 Score = 349 bits (176), Expect = 7e-93 Identities = 295/337 (87%), Gaps = 10/337 (2%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 166 ||||||||||||||||| ||||||||||| ||||||||||| ||| ||||||| |||| Sbjct: 755 aatatccttatttttacccttattgaatcatagtaaagtattcgaatccaataaggattt 696 Query: 167 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 226 ||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| Sbjct: 695 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaacaaataaa 636 Query: 227 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 286 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 635 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 576 Query: 287 ----aaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 |||||||||| | |||||| || |||||||||||| |||||||||| ||||||||| Sbjct: 575 aaataaatcctatgcagtcatagcttttgtcgttcccacagcttctcctttaatggttag 516 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 || ||||||| |||| |||||||||||| ||||||||||||||| |||||||||| Sbjct: 515 gtttgaatcctgcaatggagcttccaaa------ctttccgagttaattctctcagtttt 462 Query: 403 attaacccgggcggctctttattattgcttaaaattt 439 |||||||||||| ||||||||||||||||| |||||| Sbjct: 461 attaacccgggctgctctttattattgctttaaattt 425 Score = 204 bits (103), Expect = 3e-49 Identities = 143/155 (92%), Gaps = 1/155 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 374 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 315 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| |||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 314 attggaatcttatatctttctta-ttcttcttccttctatctatcatccctccttttatc 256 Query: 601 cacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||| || ||||||||||||| Sbjct: 255 cacatccctttagttttgttttacaacctagaatc 221
>gb|AF133480.1|AF133480 Zoysia matrella ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1204 Score = 347 bits (175), Expect = 3e-92 Identities = 296/337 (87%), Gaps = 5/337 (1%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaattt 166 |||||||||||||| |||| || || ||| ||||| ||||||||| |||||| |||| Sbjct: 786 aatatccttattttgactccta-tggatcatagtaaactattctaatccaataaagattt 728 Query: 167 cgcgggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataag 226 ||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| Sbjct: 727 cgcgggcgaatatttactctttcttgtcttatttgttaatttataaccttaccaaataaa 668 Query: 227 acaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaata 286 ||| |||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct: 667 gcaatttttttggtttgttccgccatcccacccaatgaagtattaggattcttttcaata 608 Query: 287 a----aatcctatggaatcataggttctgtcgttcccactgcttctccttgaatggttag 342 | ||||||||| | ||||||||| |||||||||||| |||||||||| ||||||||| Sbjct: 607 aaatcaatcctatgcagtcataggttttgtcgttcccacagcttctcctttaatggttag 548 Query: 343 gtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctcagtttt 402 || ||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 547 gtttgaatcctgcaatggagcttccaaaaaatttctttccgagtcaattttctcagtttt 488 Query: 403 attaacccgggcggctctttattattgcttaaaattt 439 |||||| ||||| ||||||| ||||| ||| |||||| Sbjct: 487 attaacgcgggctgctcttttttatttctttaaattt 451 Score = 165 bits (83), Expect = 2e-37 Identities = 142/158 (89%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| Sbjct: 399 ttttattatattgatgctttatcacattgc-ttttatgatgtaattcatagaccatacat 341 Query: 541 agtggaattctatatctta-tttatt--tcctcttccttctttctatcatccctcccttt 597 | |||||| |||||||| ||| || || |||||||||| |||||||||||||| ||| Sbjct: 340 attggaatcttatatctttctttcttattcttcttccttctatctatcatccctcctttt 281 Query: 598 atccacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||||| |||||||||||||||| Sbjct: 280 atccacatccctttagttttctttcacaacctagaatc 243
>gb|AY847105.1| Zeugites americanus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 944 Score = 343 bits (173), Expect = 4e-91 Identities = 324/375 (86%), Gaps = 5/375 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| |||||||||||||| ||||||||||| || Sbjct: 592 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgccttatttgtta-tt 534 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 533 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 474 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||| |||||||||||| | ||||||||| | |||||||||| ||||| Sbjct: 473 attaggattcttttccataaaatcctatccagtcataggttttttcgttcccacagcttc 414 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| ||||||||||||||||||||||||| || Sbjct: 413 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgggtc 354 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtagttct 447 ||||||||||||||||||||| ||||| ||||||| ||||||||| |||||| || || | Sbjct: 353 aattttctcagttttattaactcgggctgctcttttttattgctttaaatttttatttat 294 Query: 448 tctttcaagttacaatttttcattctctattagtt----ttattatattgatgctttttc 503 | ||||||||||| |||| ||||||| || || |||||||||||||||||| || Sbjct: 293 tgtttcaagttacgatttcgaattctctctttttttttcttattatattgatgctttatc 234 Query: 504 acattgccttttatg 518 ||||||||||||||| Sbjct: 233 acattgccttttatg 219
>gb|U62783.1|CSU62783 Chusquea sp. B ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1031 Score = 343 bits (173), Expect = 4e-91 Identities = 253/282 (89%), Gaps = 5/282 (1%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 694 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 635 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| | | |||||||||||||||||||||||||||||| ||||||||| Sbjct: 634 ccaaataaggccatttttttggtttgttccgccatcccacccaatgaagtattaggattc 575 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||| | ||||||||| |||| Sbjct: 574 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccattacttctcctttaatg 515 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagttaattttctca 397 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||| Sbjct: 514 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaattttctca 455 Query: 398 gttttattaacccgggcggctctttattattgcttaaaattt 439 ||||||||||||||||| |||||||||||| |||| |||||| Sbjct: 454 gttttattaacccgggccgctctttattatggcttcaaattt 413 Score = 220 bits (111), Expect = 4e-54 Identities = 154/167 (92%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| ||||||||||| |||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatatggatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatc 635 ||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatc 229 Score = 75.8 bits (38), Expect = 2e-10 Identities = 94/110 (85%), Gaps = 7/110 (6%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 804 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 746 Query: 89 aatgtagtccttct---aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||||||||||||||||||||||||||||| Sbjct: 745 ---gtaatctttcttaaaaaaaatatccttatttttactcttattgaatc 699
>gb|U54755.1|CWU54755 Chusquea windischii ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, partial intron Length = 1034 Score = 343 bits (173), Expect = 4e-91 Identities = 262/293 (89%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| ||||||||||||||||||||||||||||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtttactctttcctgtcttatttgttaatttatattataacctta 637 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||| | | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctaggcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 395 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 396 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 230 bits (116), Expect = 5e-57 Identities = 156/168 (92%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 228 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 807 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 749 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 748 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>ref|XM_506652.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1001_G09.24 mRNA Length = 1742 Score = 341 bits (172), Expect = 2e-90 Identities = 325/373 (87%), Gaps = 6/373 (1%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 371 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 312 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 311 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 252 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||| ||| || |||||||||||||||||| |||| | Sbjct: 251 tggagcttccaaaaaatttctttccaagtcaa-tttctcagttttattaactcgggacac 193 Query: 418 tctttattattgcttaaaatttgtagttcttctt----tcaagttacaatttttcattct 473 ||||| ||||| ||| ||||||||| ||||| || |||| |||| |||| ||||| Sbjct: 192 tctttgttattccttgaaatttgtatttcttgtttcaatcaaattacgatttcgaattct 133 Query: 474 ctattagttttattatattgatgctttttcacattgccttttatgatgtaattcatagac 533 | ||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||| Sbjct: 132 ttgttatttttattatattgatgctttatcacattgctttttatgatgtaattcatagac 73 Query: 534 catacacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcc 593 |||||| | |||||| ||||||||| |||||| |||||||||||||||||||||| ||| Sbjct: 72 catacatattggaatcctatatctttcttattt-ctcttccttctttctatcatccttcc 14 Query: 594 ctttatccacatc 606 |||||| ||||| Sbjct: 13 ttttatctacatc 1 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 478 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 419 Query: 178 atttactctttcctgtcttatttgtta 204 ||||||||||||||||||||||||||| Sbjct: 418 atttactctttcctgtcttatttgtta 392 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 582 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 526 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 525 tatattctatattta 511
>gb|AY847103.1| Pohlidium petiolatum rpl16 gene, intron; chloroplast Length = 1018 Score = 339 bits (171), Expect = 7e-90 Identities = 260/292 (89%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| ||||| ||||||||||||||||||||||| Sbjct: 663 tctaatccaataaagatttcgcgggcgaatgtttaccctttcctgtcttatttgttaatt 604 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| | | |||||||||||||||||||||||||||||| Sbjct: 603 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaagt 544 Query: 268 gttaggattcttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttc 327 |||||||||||||||| |||||||||| | ||||||||| |||||||||||| ||||| Sbjct: 543 attaggattcttttcaaaaaaatcctatccagtcataggttttgtcgttcccacagcttc 484 Query: 328 tccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagtt 387 ||||| ||||||||||| ||||||| |||| |||||||||||||||||||||||||||| Sbjct: 483 tcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaatttctttccgagtc 424 Query: 388 aattttctcagttttattaacccgggcggctctttattattgcttaaaattt 439 |||||||||||||||||||||| |||| ||||||| ||||||||| |||||| Sbjct: 423 aattttctcagttttattaaccggggctgctcttttttattgcttgaaattt 372 Score = 141 bits (71), Expect = 3e-30 Identities = 119/134 (88%), Gaps = 1/134 (0%) Strand = Plus / Minus Query: 485 attatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtg 544 |||||||||||||||| |||||||||||||||||| ||||||||||||||||||||| || Sbjct: 320 attatattgatgctttatcacattgccttttatgacgtaattcatagaccatacacattg 261 Query: 545 gaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccaca 604 |||| ||||||||| ||| ||| | |||||||| ||||||||||||| ||||| || Sbjct: 260 gaatcctatatctttctta-ttctttttccttctacctatcatccctccttttatntgca 202 Query: 605 tccctttagttttg 618 |||||||||||||| Sbjct: 201 tccctttagttttg 188
>gb|AY847094.1| Centotheca lappacea ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 815 Score = 335 bits (169), Expect = 1e-88 Identities = 307/355 (86%), Gaps = 9/355 (2%) Strand = Plus / Minus Query: 111 tccttatttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcg 170 |||||||||||| ||||||||||||| | |||||||||||||| || |||||| Sbjct: 397 tccttatttttattcttattgaatcgtg-taaagtattctaatcca--------ttcgcg 347 Query: 171 ggcgaatatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaa 230 |||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct: 346 ggcgaatatttactctttcctgtcttatttgttaatttataaccttaccaaataaagcaa 287 Query: 231 nnnnnnnggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaat 290 |||||||||||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 286 tttttttggtttgttccgccatcccgcccaatgaagtattaggattcttttcaataaaat 227 Query: 291 cctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaat 350 |||||| | ||||| ||| |||||||||||| |||||||||| ||||||||||| ||||| Sbjct: 226 cctatgcagtcataagttttgtcgttcccacagcttctcctttaatggttaggtttgaat 167 Query: 351 cccgcaacggagcttccaaaaaatttctttccgagttaattttctcagttttattaaccc 410 || |||| |||||||||||||||||| ||||||| | ||||||||||||||||||||||| Sbjct: 166 cctgcaatggagcttccaaaaaatttatttccgaatcaattttctcagttttattaaccc 107 Query: 411 gggcggctctttattattgcttaaaatttgtagttcttctttcaagttacaattt 465 ||| ||||||| ||| |||| |||||| || || || ||| ||||||| |||| Sbjct: 106 cggctgctcttttttaccgctttaaatttttatttattgtttgaagttacgattt 52
>gb|AF133491.1|AF133491 Joinvillea ascendens ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1229 Score = 327 bits (165), Expect = 3e-86 Identities = 281/319 (88%), Gaps = 6/319 (1%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 ||||||||||||| ||||||||| ||| |||| |||| |||||| |||||||||||||| Sbjct: 757 tttttactcttatcgaatcgcggcaaaatattgtaatccaataaagatttcgcgggcgaa 698 Query: 177 tatttactctttcctgtcttatttg----ttaatttataaacttaccaaataagacaann 232 ||||||||||||||||||||||| | | |||| |||| ||||||||||||||||| Sbjct: 697 tatttactctttcctgtcttattcgaggttcaattcataaccttaccaaataagacaatt 638 Query: 233 nnnnnggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatc 291 |||||||||||||||||||||||||||| | ||||||||| ||||||||| |||| Sbjct: 637 ttcttggtttgttccgccatcccacccaatgaattcttaggattcgttttcaatagaatc 578 Query: 292 ctatggaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatc 351 ||||| | |||||||||||||||||||||| |||||||| | |||||||||||||||| | Sbjct: 577 ctatgcagtcataggttctgtcgttcccacagcttctccattaatggttaggtctgaacc 518 Query: 352 ccgcaacggagcttcc-aaaaaatttctttccgagttaattttctcagttttattaaccc 410 |||||| ||||||||| ||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 517 ccgcaatggagcttccaaaaaaatttctttccgagtcaattttctcagttttattaaccc 458 Query: 411 gggcggctctttattattg 429 || |||||||||||||| Sbjct: 457 agggtgctctttattattg 439 Score = 168 bits (85), Expect = 1e-38 Identities = 132/145 (91%), Gaps = 2/145 (1%) Strand = Plus / Minus Query: 484 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 543 ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||| | | Sbjct: 385 tattatattgatgctttctcacactgccttttatgatgtaattcatagaccatacatatt 326 Query: 544 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 603 ||||| ||||||||| ||| ||| | ||| ||||||||||||||||||| ||||||||| Sbjct: 325 ggaatcctatatctttctta-ttcttgttctttctttctatcatccctccatttatccac 267 Query: 604 atccctttagttttgcttcacaacc 628 ||||||||| ||||||||||||||| Sbjct: 266 atcccttta-ttttgcttcacaacc 243
>gb|AY912198.1| Guadua angustifolia ribosomal protein L16 (rpl16) gene, partial sequence; chloroplast Length = 1079 Score = 323 bits (163), Expect = 4e-85 Identities = 240/268 (89%), Gaps = 5/268 (1%) Strand = Plus / Minus Query: 191 tgtcttatttgttaatttata-----aacttaccaaataagacaannnnnnnggtttgtt 245 ||||||||||||||||||||| | ||||||||||||| ||| |||||||| Sbjct: 559 tgtcttatttgttaatttatattagaaccttaccaaataaggcaatttttttggtttgtt 500 Query: 246 ccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatcatag 305 |||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| Sbjct: 499 ccgccatcccacccaatgaagtattaggattcttttcaataaaatcctatgcagtcatag 440 Query: 306 gttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagctt 365 ||||||||||||||||| ||||||||| ||||||||||||||||| || ||| ||||||| Sbjct: 439 gttctgtcgttcccactacttctcctttaatggttaggtctgaattccacaatggagctt 380 Query: 366 ccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctttatt 425 ||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||| Sbjct: 379 ccaaaaaatttctttccaagtcaattttctcagttttattaacccgggccgctctttatt 320 Query: 426 attgcttaaaatttgtagttcttctttc 453 ||||||| ||||||||| ||||| |||| Sbjct: 319 attgcttcaaatttgtatttcttgtttc 292 Score = 186 bits (94), Expect = 6e-44 Identities = 132/142 (92%), Gaps = 2/142 (1%) Strand = Plus / Minus Query: 495 tgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctata 554 |||||| |||||| ||||||||||||||||||||||||||||||| | |||||| ||||| Sbjct: 244 tgctttatcacat-gccttttatgatgtaattcatagaccatacatattggaatcctata 186 Query: 555 tcttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagt 614 |||| ||||| ||||||| ||||||||||||||||||| |||||||||||||||||||| Sbjct: 185 tctttcttatt-cctcttctttctttctatcatccctccttttatccacatccctttagt 127 Query: 615 tttgcttcacaacctagaatcc 636 |||||||||||||||||||||| Sbjct: 126 tttgcttcacaacctagaatcc 105 Score = 133 bits (67), Expect = 8e-28 Identities = 120/136 (88%), Gaps = 10/136 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 693 atctagaatatat-ctagatgtgtgtgtctatttatctatattctatatttatagataat 635 Query: 89 aatgtagtccttct------aaaaaatatccttatttttactcttattgaatcgcggtaa 142 ||| ||||||| ||||||| |||||||||||||||||||||||||||||||| Sbjct: 634 ---gtaatccttcttaaaaaaaaaaatctccttatttttactcttattgaatcgcggtaa 578 Query: 143 agtattctaattcaat 158 |||||||||||||||| Sbjct: 577 agtattctaattcaat 562
>gb|AF133478.1|AF133478 Sorghum bicolor ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1200 Score = 323 bits (163), Expect = 4e-85 Identities = 258/293 (88%), Gaps = 8/293 (2%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| ||||||||||||||| | |||||||||||||| Sbjct: 762 tttttattcttattgaatcgtggtaaagtattctaa--------ggatttcgcgggcgaa 711 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 710 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaaattttt 651 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct: 650 tggtttgttccgccatcccacccaatgaagagttaggattctttccaataaaatcctatg 591 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||| | |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 590 tagtcataggctttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 531 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacc 409 | |||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct: 530 atggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacc 478 Score = 190 bits (96), Expect = 4e-45 Identities = 144/158 (91%), Gaps = 4/158 (2%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcctttt---atgatgtaattcatagaccata 537 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||| Sbjct: 395 ttttattatattgatgctttatcacattgcctttttttatgatgtaattcatagaccata 336 Query: 538 cacagtggaattctatatcttatttatttcctcttccttctttctatcatccctcccttt 597 |||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| ||| Sbjct: 335 cacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctcctttt 277 Query: 598 atccacatccctttagttttgcttcacaacctagaatc 635 |||||||||||||||||||||||||||| ||||||||| Sbjct: 276 atccacatccctttagttttgcttcacagcctagaatc 239
>gb|U62792.1|CNU62792 Chusquea nudiramea ribosomal protein L16 (rpl16) gene, chloroplast gene encoding chloroplast protein, intron, partial sequence Length = 1034 Score = 319 bits (161), Expect = 6e-84 Identities = 259/293 (88%), Gaps = 7/293 (2%) Strand = Plus / Minus Query: 163 atttcgcgggcgaatatttactctttcctgtcttatttgttaatttata-----aactta 217 ||||||||||||||| | ||||||| ||||||||| |||| |||||||| | |||| Sbjct: 696 atttcgcgggcgaatgtatactcttgcctgtcttaattgtcaatttatattataacctta 637 Query: 218 ccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagtgttaggattc 277 ||||||||| ||| |||||||||||||||||||||||||||||| ||||||||| Sbjct: 636 ccaaataaggcaatttttttggtttgttccgccatcccacccaatgaagtattaggattc 577 Query: 278 ttttcaataaaatcctatggaatcataggttctgtcgttcccactgcttctccttgaatg 337 ||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||| |||| Sbjct: 576 ttttcaaaaaaatcctatgcagtcataggttctgtcgttcccactacttctcctttaatg 517 Query: 338 gttaggtctgaatcccgcaacggagcttccaaaaaatttctttccgagt--taattttct 395 |||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| Sbjct: 516 gttaggtctgaatcccacaatggagcttccaaaaaatttctttccgagtaaaaattttct 457 Query: 396 cagttttattaacccgggcggctctttattattgcttaaaatttgtagttctt 448 ||||||||||||||||||| ||||||||||||||||| |||||| || ||||| Sbjct: 456 cagttttattaacccgggccgctctttattattgcttcaaatttttatttctt 404 Score = 230 bits (116), Expect = 5e-57 Identities = 156/168 (92%), Gaps = 1/168 (0%) Strand = Plus / Minus Query: 469 attctctattagttttattatattgatgctttttcacattgccttttatgatgtaattca 528 ||||||| ||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 394 attctctgttatttttattatattgatgctttatcacattgccttttatgatgtaactca 335 Query: 529 tagaccatacacagtggaattctatatcttatttatttcctcttccttctttctatcatc 588 ||||||||||| | |||||| ||||||||| ||||| ||||||| |||||||||||||| Sbjct: 334 tagaccatacatattggaatcctatatctttcttatt-cctcttctttctttctatcatc 276 Query: 589 cctccctttatccacatccctttagttttgcttcacaacctagaatcc 636 ||||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 275 cctccttttatccacatccctttagttttgcttcacaacctagaatcc 228 Score = 63.9 bits (32), Expect = 6e-07 Identities = 93/111 (83%), Gaps = 8/111 (7%) Strand = Plus / Minus Query: 29 atctagaatatatnccagatgtgtgtggatatttatctaaattctatatttatagataat 88 ||||||||||||| | ||||||||||| |||||||| ||| |||||||||||||||| Sbjct: 807 atctagaatatat-ctagatgtgtgtgtctatttatccgtattatatatttatagataat 749 Query: 89 aatgtagtccttct----aaaaaatatccttatttttactcttattgaatc 135 ||| || |||| ||||||| ||||||||||||||||||||||||| Sbjct: 748 ---gtaatctttcttaaaaaaaaatctccttatttttactcttattgaatc 701
>gb|AY847101.1| Orthoclada laxa ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1068 Score = 301 bits (152), Expect = 2e-78 Identities = 278/322 (86%), Gaps = 4/322 (1%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||||||||| Sbjct: 716 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttgttaatt 657 Query: 208 tataaacttaccaaataagacaannnnnnnggtttgttccgccatcccacccaatgaagt 267 ||||| |||||||||||| | | |||||||||||||||||||||||||||| | Sbjct: 656 tataaccttaccaaataaagccatttttttggtttgttccgccatcccacccaatgaaat 597 Query: 268 gttaggattcttttcaataaaat----cctatggaatcataggttctgtcgttcccactg 323 |||||||||||||||||||||| ||||| | ||||||||| |||||||||||| | Sbjct: 596 attaggattcttttcaataaaataaatcctatccagtcataggttttgtcgttcccacag 537 Query: 324 cttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatttctttccg 383 ||||||||| |||||||||| ||||| | |||| ||||||||||||||||||||||||| Sbjct: 536 cttctcctttaatggttaggattgaattctgcaatggagcttccaaaaaatttctttccg 477 Query: 384 agttaattttctcagttttattaacccgggcggctctttattattgcttaaaatttgtag 443 || |||||||||||||||||||||||||| ||||||| ||||||||| ||||||| | Sbjct: 476 agcccattttctcagttttattaacccgggctgctcttttttattgctttaaatttggat 417 Query: 444 ttcttctttcaagttacaattt 465 || || ||||||| ||| |||| Sbjct: 416 ttattgtttcaaggtacgattt 395 Score = 182 bits (92), Expect = 1e-42 Identities = 129/140 (92%), Gaps = 1/140 (0%) Strand = Plus / Minus Query: 496 gctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattctatat 555 |||||||||||||||||||||||||||||||||||| ||||||||| |||||| |||||| Sbjct: 357 gctttttcacattgccttttatgatgtaattcatagcccatacacattggaatcctatat 298 Query: 556 cttatttatttcctcttccttctttctatcatccctccctttatccacatccctttagtt 615 ||| ||| | | |||||||||| ||||||||||||| ||||||||||||||||||||| Sbjct: 297 ctttcttaat-cttcttccttctacctatcatccctccttttatccacatccctttagtt 239 Query: 616 ttgcttcacaacctagaatc 635 |||||||||||||||||||| Sbjct: 238 ttgcttcacaacctagaatc 219
>gb|AY847111.1| Zeugites sagittatus ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1018 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 570 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 511 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 510 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 451 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 450 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 391 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 475 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 390 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 333 Score = 182 bits (92), Expect = 1e-42 Identities = 144/160 (90%), Gaps = 6/160 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 318 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 259 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| |||||| | | |||||||| ||||||||||||| |||||| Sbjct: 258 attggaatcctatatcttttttatt-ctttttccttctacctatcatccctccttttatc 200 Query: 601 cacatccctttagttt-----tgcttcacaacctagaatc 635 |||||||||||||||| || |||||||||||||||| Sbjct: 199 cacatccctttagtttagttttgtttcacaacctagaatc 160 Score = 107 bits (54), Expect = 5e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 659 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 600 Query: 208 tataaacttaccaaataa 225 ||||| |||||||||||| Sbjct: 599 tataaccttaccaaataa 582
>gb|AY847102.1| Lophatherum gracile ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 1078 Score = 281 bits (142), Expect = 1e-72 Identities = 214/238 (89%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| Sbjct: 630 ggtttgttccgccatcccccccaatgaagtattaggattcttttcaataaaatcctatcc 571 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| Sbjct: 570 agtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaa 511 Query: 358 cggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggc 417 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||| || Sbjct: 510 tggagcttccaaaaaatttctttccgagtcaattttctcagttttattaacccgggctgc 451 Query: 418 tctttattattgcttaaaatttgtagttcttctttcaagttacaatttttcattctct 475 ||||| ||||||||| ||||| | || || ||||||||||| |||| | ||||||| Sbjct: 450 tcttttttattgcttgcaatttttttttattgtttcaagttacgatttctaattctct 393 Score = 182 bits (92), Expect = 1e-42 Identities = 144/160 (90%), Gaps = 6/160 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 378 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 319 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| |||||| | | |||||||| ||||||||||||| |||||| Sbjct: 318 attggaatcctatatcttttttatt-ctttttccttctacctatcatccctccttttatc 260 Query: 601 cacatccctttagttt-----tgcttcacaacctagaatc 635 |||||||||||||||| || |||||||||||||||| Sbjct: 259 cacatccctttagtttagttttgtttcacaacctagaatc 220 Score = 107 bits (54), Expect = 5e-20 Identities = 72/78 (92%) Strand = Plus / Minus Query: 148 tctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatttgttaatt 207 |||||| |||||| ||||||||||||||| ||||||||||||||||||||||| ||||| Sbjct: 719 tctaatccaataaagatttcgcgggcgaatgtttactctttcctgtcttatttggtaatt 660 Query: 208 tataaacttaccaaataa 225 ||||| |||||||||||| Sbjct: 659 tataaccttaccaaataa 642
>gb|AY847113.1| Micraira lazaridis ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 757 Score = 278 bits (140), Expect = 2e-71 Identities = 214/238 (89%), Gaps = 2/238 (0%) Strand = Plus / Minus Query: 195 ttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcc 254 |||||||||||||||||| |||||||||||| ||| ||||||||||||||||| Sbjct: 325 ttatttgttaatttataa-cttaccaaataaagcaatttttt-ggtttgttccgccatcc 268 Query: 255 cacccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcg 314 ||||||||||||| |||||||||||||||||||||||||||| | ||||||||| ||||| Sbjct: 267 cacccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttgtcg 208 Query: 315 ttcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaat 374 ||||||| |||||||||| ||||||||||| ||||||| |||| |||||||||||||||| Sbjct: 207 ttcccacagcttctcctttaatggttaggtttgaatcctgcaatggagcttccaaaaaat 148 Query: 375 ttctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 432 || ||||||||| ||||||||||||||||||||||||||| |||||||||| ||||| Sbjct: 147 ttatttccgagtcaattttctcagttttattaacccgggctactctttattaatgctt 90 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcctttta 516 ||||| |||||||||||||| ||||||||||||||| Sbjct: 36 ttttaatatattgatgctttatcacattgcctttta 1 Score = 52.0 bits (26), Expect = 0.002 Identities = 49/54 (90%), Gaps = 2/54 (3%) Strand = Plus / Minus Query: 107 aatatccttatttttactct-tattgaatcgcggtaaagtattctaattcaata 159 |||| ||||||||||||||| |||| ||||| |||||||||||||||| ||||| Sbjct: 378 aatacccttatttttactctatatt-aatcgtggtaaagtattctaatacaata 326
>emb|X86563.2|ZMA86563 Zea mays complete chloroplast genome Length = 140384 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Plus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 80231 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 80290 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 80291 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaattttgt 80350 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 ||||||| ||||||||| ||||||||||||||||||||||| ||||||| ||||||| Sbjct: 80351 -ggtttgt-ccgccatcca--ccaatgaagtgttaggattcttt-caataaa-tcctatg 80404 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 80405 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 80464 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 80465 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 80521 Query: 417 ctctttatt 425 ||||||||| Sbjct: 80522 ctctttatt 80530 Score = 139 bits (70), Expect = 1e-29 Identities = 139/159 (87%), Gaps = 6/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 80600 ttttattatattgatgctttatcacattgccttttttttatgatg-aattcatagaccat 80658 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 80659 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 80717 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 ||||||| |||||||||||||||||| | ||||||||| Sbjct: 80718 tatccactaccctttagttttgcttcatagcctagaatc 80756
>gb|M15176.1|MZECPPG Zea mays chloroplast Eco x DNA Length = 1368 Score = 272 bits (137), Expect = 1e-69 Identities = 271/309 (87%), Gaps = 9/309 (2%) Strand = Plus / Minus Query: 117 tttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaa 176 |||||| ||||||||||||| |||||||||||||||| ||||||| |||||||||||||| Sbjct: 346 tttttattcttattgaatcgtggtaaagtattctaatccaataaggatttcgcgggcgaa 287 Query: 177 tatttactctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnn 236 ||||||||||||||||||||||||||||||||| || |||| ||||||| ||| Sbjct: 286 tatttactctttcctgtcttatttgttaatttagaaccttatcaaataaagcaa-ttttg 228 Query: 237 nggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatg 296 |||||| |||||||||| |||||||||||||||||||| ||||||| |||||||||| Sbjct: 227 tggtttg-tccgccatcc--accaatgaagtgttaggattc-tttcaat-aaatcctatg 173 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||||||||| |||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct: 172 tagtcataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgca 113 Query: 357 acggagcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcgg 416 | ||||||||| || ||| ||||||||| ||||||||||||||||||||||| ||| | Sbjct: 112 atggagcttcc--aatttttttttccgagtcaattttctcagttttattaaccc-ggctg 56 Query: 417 ctctttatt 425 ||||||||| Sbjct: 55 ctctttatt 47
>gb|AY847097.1| Chasmanthium curvifolium ribosomal protein L16 large subunit (rpl16) gene, intron and partial cds; chloroplast Length = 982 Score = 270 bits (136), Expect = 5e-69 Identities = 210/237 (88%) Strand = Plus / Minus Query: 196 tatttgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatccc 255 ||||||||||||||||| || ||||||||| ||| || ||||||||||||||| Sbjct: 660 tatttgttaatttataacctaaccaaataaagcaatttttttggcttgttccgccatccc 601 Query: 256 acccaatgaagtgttaggattcttttcaataaaatcctatggaatcataggttctgtcgt 315 |||||||||||| |||||||||||||||||||||||||||| | ||||||||| | |||| Sbjct: 600 acccaatgaagtattaggattcttttcaataaaatcctatgcagtcataggttttctcgt 541 Query: 316 tcccactgcttctccttgaatggttaggtctgaatcccgcaacggagcttccaaaaaatt 375 |||||| |||||||||| |||||||||| ||||||| |||| ||||||||||||||||| Sbjct: 540 tcccacagcttctcctttcatggttaggtttgaatcctgcaatggagcttccaaaaaatt 481 Query: 376 tctttccgagttaattttctcagttttattaacccgggcggctctttattattgctt 432 ||||||||||| ||||||||||||||||||||||| ||| ||||||| ||||||||| Sbjct: 480 tctttccgagtcaattttctcagttttattaacccaggctgctcttttttattgctt 424 Score = 222 bits (112), Expect = 1e-54 Identities = 146/156 (93%), Gaps = 1/156 (0%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacac 540 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 369 ttttattatattgatgctttatcacattgccttttatgatgtaattcatagaccatacac 310 Query: 541 agtggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatc 600 | |||||| ||||||||| ||| ||| |||||||||| |||||||||||||| |||||| Sbjct: 309 attggaatcctatatctttctta-ttcttcttccttctatctatcatccctccttttatc 251 Query: 601 cacatccctttagttttgcttcacaacctagaatcc 636 | |||||||||||||||||||||||||||||||||| Sbjct: 250 cccatccctttagttttgcttcacaacctagaatcc 215
>dbj|AP007101.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: SES205A, clone: SSE-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007100.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Jw385, clone: SJw-79kb Length = 672 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007099.1| Saccharum spontaneum chloroplast gene for ribosomal protein L16, partial cds, strain: Glagah, clone: SGl-79kb Length = 671 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 260 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 319 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 320 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 378 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 379 tatccagatccctttagttttgcttcacagcctagaatc 417
>dbj|AP007098.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: COL/PAPUA N.G/TARC/E12, clone: EPN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007097.1| Saccharum edule chloroplast gene for ribosomal protein L16, partial cds, strain: IN95-009, clone: EIN-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007096.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Ooshima, clone: SiO-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007095.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Chunnee, clone: BCh-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007094.1| Saccharum sinense chloroplast gene for ribosomal protein L16, partial cds, strain: Tekcha, clone: SiTe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007093.1| Saccharum barberi chloroplast gene for ribosomal protein L16, partial cds, strain: Kewali14, clone: BKe-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007092.1| Saccharum robustum chloroplast gene for ribosomal protein L16, exon 2, partial sequence Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007091.1| Saccharum robustum chloroplast gene for ribosomal protein L16, partial cds, strain: 6, clone: R6-79kb Length = 666 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 255 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 314 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 315 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 373 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 374 tatccagatccctttagttttgcttcacagcctagaatc 412
>dbj|AP007090.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Fiji40, clone: OFi-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 314 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 372 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 373 tatccagatccctttagttttgcttcacagcctagaatc 411
>dbj|AP007089.1| Saccharum officinarum chloroplast gene for ribosomal protein L16, partial cds, strain: Badila, clone: OBa-79kb Length = 665 Score = 264 bits (133), Expect = 3e-67 Identities = 186/201 (92%), Gaps = 2/201 (0%) Strand = Plus / Plus Query: 242 tgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatggaatc 301 ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | || Sbjct: 1 tgttccgccatcccacccaatgaagtgttaggattctttccaataaaatcctatgtagtc 60 Query: 302 ataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacgga 361 ||||||| |||||||||||| |||||||||| ||||||||||| ||||||| |||| ||| Sbjct: 61 ataggttttgtcgttcccacagcttctcctttaatggttaggtttgaatcctgcaatgga 120 Query: 362 gcttccaaaaaatttctttccgagttaattttctcagttttattaacccgggcggctctt 421 ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||||| Sbjct: 121 gcttccaaaaaatttctttccgagtcaattttctcagttttattaaccc-ggctgctctt 179 Query: 422 ta-ttattgcttaaaatttgt 441 || ||||||||| | |||||| Sbjct: 180 tatttattgctttatatttgt 200 Score = 170 bits (86), Expect = 4e-39 Identities = 142/159 (89%), Gaps = 5/159 (3%) Strand = Plus / Plus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct: 254 ttttattatattgatgctttatcacattgccttttttttatgatgtaattcataaaccat 313 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||||| ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 314 acacatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 372 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 |||||| |||||||||||||||||||||| ||||||||| Sbjct: 373 tatccagatccctttagttttgcttcacagcctagaatc 411
>ref|XM_450631.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2141 Score = 188 bits (95), Expect = 2e-44 Identities = 140/155 (90%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattcttttcaataaaatcctatgg 297 |||||||||||||||||||||||||||||| || ||||||||||||| |||||||||| Sbjct: 156 ggtttgttccgccatcccacccaatgaagtattgggattcttttcaagaaaatcctatcc 97 Query: 298 aatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaa 357 | |||||||||||||||||||||| |||||||||| ||||||||||| | |||| | ||| Sbjct: 96 agtcataggttctgtcgttcccacggcttctcctttaatggttaggttttaatctcacaa 37 Query: 358 cggagcttccaaaaaatttctttccgagttaattt 392 |||||||||||||||||||||||| ||| ||||| Sbjct: 36 tggagcttccaaaaaatttctttccaagtcaattt 2 Score = 165 bits (83), Expect = 2e-37 Identities = 86/87 (98%) Strand = Plus / Minus Query: 118 ttttactcttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaat 177 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 263 ttttactcttattgaatcgcggtaaagtattctaattcaataaaaatttcgcgggcgaat 204 Query: 178 atttactctttcctgtcttatttgtta 204 ||||||||||||||||||||||||||| Sbjct: 203 atttactctttcctgtcttatttgtta 177 Score = 50.1 bits (25), Expect = 0.009 Identities = 64/75 (85%), Gaps = 3/75 (4%) Strand = Plus / Minus Query: 6 aatatatagtcnaaaaagnaagcatctagaatatatnccagatgtgtgtggatatttatc 65 ||||||||||| | |||| || ||||||||||||| | |||||||| || |||||||| Sbjct: 367 aatatatagtcaagaaag--aggatctagaatatat-ctagatgtgtatgtttatttatc 311 Query: 66 taaattctatattta 80 || |||||||||||| Sbjct: 310 tatattctatattta 296
>gb|AF276969.1| Spartina anglica ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 125 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 184 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 185 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 244 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 245 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 291 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatc 135 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF276968.1| Spartina alterniflora ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 680 Score = 186 bits (94), Expect = 6e-44 Identities = 148/167 (88%), Gaps = 1/167 (0%) Strand = Plus / Minus Query: 125 cttattgaatcgcggtaaagtattctaattcaataagaatttcgcgggcgaatatttact 184 ||||||||||| ||||||||||||||| |||||| |||||||||||||||||||||| Sbjct: 206 cttattgaatcatagtaaagtattctaatccaataaagatttcgcgggcgaatatttact 147 Query: 185 ctttcctgtcttatttgttaatttataaacttaccaaataagacaannnnnnnggtttgt 244 ||||| |||||||||||||||||||||| |||||||||||| ||| ||||||| Sbjct: 146 ctttcttgtcttatttgttaatttataaccttaccaaataaagcaatttttttggtttgt 87 Query: 245 tccgccatcccacccaatgaagtgttaggattcttttcaataaaatc 291 ||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct: 86 tccgccatccc-cccaatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatc 135 |||||||||||||||| ||||||||||| Sbjct: 272 aatatccttatttttaaccttattgaatc 244
>gb|AF133489.1|AF133489 Anomochloa marantoidea ribosomal protein 16 large subunit (rpl16) gene, intron, chloroplast sequence Length = 1222 Score = 184 bits (93), Expect = 2e-43 Identities = 152/169 (89%), Gaps = 2/169 (1%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||||| Sbjct: 632 ggtttgttccgccatcccacccaatgaagtgttaggattcgttttcaaaagaatcctatg 573 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | |||| ||||||||||||||||| |||||||| | |||||||||||||||| || ||| Sbjct: 572 cagtcatgggttctgtcgttcccacagcttctccattaatggttaggtctgaaccctgca 513 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcagttttat 404 | ||||||||||| |||||| ||||||||| |||||||||||||||| Sbjct: 512 atggagcttccaaccaaatttatttccgagtccattttctcagttttat 464 Score = 135 bits (68), Expect = 2e-28 Identities = 132/152 (86%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 484 tattatattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagt 543 |||| ||| |||||||| ||||| ||||||||| ||||||||||||||||||||| | | Sbjct: 403 tattctatggatgctttatcacactgccttttagaatgtaattcatagaccatacatatt 344 Query: 544 ggaattctatatcttatttatttcctcttccttctttctatcatccctccctttatccac 603 ||||| || || || ||| ||||| ||| ||||||||||||||||||| |||||| || Sbjct: 343 ggaatcctcgatttttctta-ttcctgttctttctttctatcatccctccatttatctac 285 Query: 604 atccctttagttttgcttcacaacctagaatc 635 ||||||||| |||||||||||||||||||||| Sbjct: 284 atccctttatttttgcttcacaacctagaatc 253 Score = 65.9 bits (33), Expect = 2e-07 Identities = 79/93 (84%), Gaps = 1/93 (1%) Strand = Plus / Minus Query: 103 aaaaaatatccttatttttactcttattgaatcgcggtaaagtattctaattc-aataag 161 ||||||| || || |||||| |||||||||||| || |||||||| | | | ||||| Sbjct: 782 aaaaaatctctttctttttattcttattgaatcatgggaaagtattgttactataataaa 723 Query: 162 aatttcgcgggcgaatatttactctttcctgtc 194 |||||||||||||||||||||||||||||||| Sbjct: 722 gatttcgcgggcgaatatttactctttcctgtc 690
>gb|AF276970.1| Spartina maritima ribosomal protein L16 (rpl16) gene, intron and partial cds; chloroplast gene for chloroplast product Length = 656 Score = 180 bits (91), Expect = 4e-42 Identities = 136/152 (89%), Gaps = 1/152 (0%) Strand = Plus / Minus Query: 140 taaagtattctaattcaataagaatttcgcgggcgaatatttactctttcctgtcttatt 199 |||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 191 taaagtattctaatccaataaagatttcgcgggcgaatatttactctttcttgtcttatt 132 Query: 200 tgttaatttataaacttaccaaataagacaannnnnnnggtttgttccgccatcccaccc 259 ||||||||||||| |||||||||||| ||| |||||||||||||||||| ||| Sbjct: 131 tgttaatttataaccttaccaaataaagcaatttttttggtttgttccgccatccc-ccc 73 Query: 260 aatgaagtgttaggattcttttcaataaaatc 291 |||||||| ||||||||||||||||||||||| Sbjct: 72 aatgaagtattaggattcttttcaataaaatc 41 Score = 42.1 bits (21), Expect = 2.2 Identities = 27/29 (93%) Strand = Plus / Minus Query: 107 aatatccttatttttactcttattgaatc 135 |||||||||||||||| ||||||||||| Sbjct: 248 aatatccttatttttaaccttattgaatc 220
>emb|Y00375.1|CHZMRP16 Maize chloroplast rpl16 gene for ribosomal protein L16 exon 1 Length = 548 Score = 139 bits (70), Expect = 1e-29 Identities = 139/159 (87%), Gaps = 6/159 (3%) Strand = Plus / Minus Query: 481 ttttattatattgatgctttttcacattgcctttt----atgatgtaattcatagaccat 536 |||||||||||||||||||| |||||||||||||| |||||| |||||||||||||| Sbjct: 525 ttttattatattgatgctttatcacattgccttttttttatgatg-aattcatagaccat 467 Query: 537 acacagtggaattctatatcttatttatttcctcttccttctttctatcatccctccctt 596 ||| | ||||| ||||||||| ||||| | |||||||||| |||||||||||||| || Sbjct: 466 acatatgggaatcctatatctttcttatt-cttcttccttctatctatcatccctccttt 408 Query: 597 tatccacatccctttagttttgcttcacaacctagaatc 635 ||||||| |||||||||||||||||| | ||||||||| Sbjct: 407 tatccactaccctttagttttgcttcatagcctagaatc 369
>gb|AF446051.1|AF446051S1 Hordeum vulgare Rpl16 (rpl16) gene, exon 1; chloroplast gene for chloroplast product Length = 282 Score = 117 bits (59), Expect = 5e-23 Identities = 59/59 (100%) Strand = Plus / Minus Query: 580 tctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatccca 638 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 282 tctatcatccctccctttatccacatccctttagttttgcttcacaacctagaatccca 224
>gb|AY855890.1| Musa x paradisiaca voucher ITC0116 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855889.1| Musa x paradisiaca voucher TM128 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855888.1| Musa x paradisiaca voucher ITC0677 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855887.1| Musa x paradisiaca voucher TM110 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855886.1| Musa x paradisiaca voucher ITC0983 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855885.1| Musa x paradisiaca voucher TM139 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1074 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855884.1| Musa acuminata voucher TM71 (QSG) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855883.1| Musa acuminata subsp. siamea voucher TM051 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || |||| |||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcatatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855882.1| Musa acuminata subsp. siamea voucher TM91 (KU) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 85.7 bits (43), Expect = 2e-13 Identities = 160/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||| ||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaattctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855881.1| Musa banksii voucher ITC0254 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855880.1| Musa acuminata subsp. malaccensis voucher ITC0250 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855879.1| Musa acuminata subsp. malaccensis voucher TM68 ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1073 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 677 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 735 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 736 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 794 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 795 tttatttttgtttcacaacc 814 Score = 93.7 bits (47), Expect = 7e-16 Identities = 161/194 (82%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 460 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 519 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||| ||||| | ||| Sbjct: 520 cagtcacaggttccgtcgttcccatagcttctccgttaatggttaggcctgaactctgca 579 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 580 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 637 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 638 ggctctttattatt 651 Score = 56.0 bits (28), Expect = 1e-04 Identities = 34/36 (94%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||||||||||| |||| ||||| Sbjct: 380 tttcgcgggcgaatatttactctttactgttttatt 415
>gb|AY855878.1| Musa textilis voucher NEU0001 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1033 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855877.1| Musa troglodytarum voucher NEU0388 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855876.1| Musa troglodytarum voucher NEU0385 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY855875.1| Musa jackeyi voucher NEU0389 (CIRAD) ribosomal protein 16 (rpl16) gene, partial cds; chloroplast Length = 1032 Score = 103 bits (52), Expect = 7e-19 Identities = 120/140 (85%), Gaps = 2/140 (1%) Strand = Plus / Plus Query: 489 tattgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaat 548 |||||||||||| ||||||||||||| |||| ||||||||||||||||||| | |||||| Sbjct: 690 tattgatgctttatcacattgccttt-atgaggtaattcatagaccatacatattggaat 748 Query: 549 tctatatcttatttatttcctcttccttctttctatcatccctccctttatccacatccc 608 |||||| | ||||| | ||| |||||||||||||| ||| |||||||||||||| Sbjct: 749 catatatcattgatatttt-tgttctctctttctatcatccttccatttatccacatccc 807 Query: 609 tttagttttgcttcacaacc 628 |||| ||||| ||||||||| Sbjct: 808 tttatttttgtttcacaacc 827 Score = 101 bits (51), Expect = 3e-18 Identities = 162/194 (83%), Gaps = 5/194 (2%) Strand = Plus / Plus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| | || |||||| |||||| || ||||||||| Sbjct: 482 ggttcgttccgccatcccacccaatgaattattcggattcgttttcagtagaatcctatg 541 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||| |||||||||| |||||||| | |||||||||||||||| | ||| Sbjct: 542 cagtcacaggttccgtcgttcccatagcttctccattaatggttaggtctgaactctgca 601 Query: 357 acggagcttccaa-aaaatttctttccgagttaattttctcag-ttttattaacccgggc 414 | |||||| |||| |||||| ||| ||||| ||| | || || |||||||||||| | Sbjct: 602 atggagctcccaacaaaattccttctcgagtcaatctccttagtttttattaaccc--ga 659 Query: 415 ggctctttattatt 428 |||||||||||||| Sbjct: 660 ggctctttattatt 673 Score = 48.1 bits (24), Expect = 0.036 Identities = 33/36 (91%) Strand = Plus / Plus Query: 164 tttcgcgggcgaatatttactctttcctgtcttatt 199 ||||||||||||||||| ||||||| |||| ||||| Sbjct: 402 tttcgcgggcgaatattgactctttactgttttatt 437
>gb|AY500680.1| Physocarpus opulifolius voucher JSh1015 rpl16 gene, intron; chloroplast Length = 932 Score = 93.7 bits (47), Expect = 7e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| |||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| Sbjct: 530 ggttcgttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatg 471 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 | ||| |||||||||||||||||| |||||| | ||||||||||||||||| | || Sbjct: 470 cattcacaggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctaca 411 Query: 357 acggagc 363 ||||||| Sbjct: 410 acggagc 404 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 165 ttcgcgggcgaatatttactctttc 189 ||||||||||||||||||||||||| Sbjct: 615 ttcgcgggcgaatatttactctttc 591
>gb|AY727405.1| Trillium ovatum rpL16 gene, intron; chloroplast Length = 988 Score = 93.7 bits (47), Expect = 7e-16 Identities = 108/127 (85%), Gaps = 1/127 (0%) Strand = Plus / Minus Query: 238 ggtttgttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatg 296 |||| ||||||||||||||||||||||| ||||||||| ||||||||| |||||||| Sbjct: 561 ggttcgttccgccatcccacccaatgaatcattaggattcgttttcaatagaatcctata 502 Query: 297 gaatcataggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgca 356 ||||| |||||||||||||||| ||||| || | |||||||||| |||||| | ||| Sbjct: 501 caatcacgggttctgtcgttcccatagcttcgccattaatggttaggcctgaattctgca 442 Query: 357 acggagc 363 | ||||| Sbjct: 441 atggagc 435 Score = 63.9 bits (32), Expect = 6e-07 Identities = 118/144 (81%), Gaps = 2/144 (1%) Strand = Plus / Minus Query: 492 tgatgctttttcacattgccttttatgatgtaattcatagaccatacacagtggaattct 551 ||||||||| ||||| |||||||||||| | |||||||||||||||| | |||||| | Sbjct: 347 tgatgctttatcacactgccttttatgagatgattcatagaccatacatattggaatcat 288 Query: 552 atatcttatttatttcctcttccttctttctatcatccctccctttatccacatcccttt 611 ||||| | ||||| | ||| |||||||||||| | ||| ||||||||||||||| Sbjct: 287 atatcattgatattt-ttgttctctctttctatcat-cttccatttatccacatccctcc 230 Query: 612 agttttgcttcacaacctagaatc 635 | ||||| ||||||||| |||||| Sbjct: 229 atttttgtttcacaaccgagaatc 206 Score = 42.1 bits (21), Expect = 2.2 Identities = 24/25 (96%) Strand = Plus / Minus Query: 165 ttcgcgggcgaatatttactctttc 189 |||||||||||||||| |||||||| Sbjct: 649 ttcgcgggcgaatattgactctttc 625
>gb|DQ100233.1| Purshia tridentata voucher 20A ribosomal protein 16 large subunit (rpl16) gene, intron; chloroplast Length = 787 Score = 89.7 bits (45), Expect = 1e-14 Identities = 103/121 (85%), Gaps = 1/121 (0%) Strand = Plus / Minus Query: 244 ttccgccatcccacccaatgaagtgttaggattc-ttttcaataaaatcctatggaatca 302 ||||||||||| |||||||||| ||||||||| ||||||||| |||| |||| | ||| Sbjct: 511 ttccgccatcctacccaatgaatcattaggattcgttttcaatagaatcttatgcattca 452 Query: 303 taggttctgtcgttcccactgcttctccttgaatggttaggtctgaatcccgcaacggag 362 |||||||||||||||||| |||||| | ||||||||||||||||| | |||||||| Sbjct: 451 caggttctgtcgttcccaccacttctcgattaatggttaggtctgaattctacaacggag 392 Query: 363 c 363 | Sbjct: 391 c 391 Score = 50.1 bits (25), Expect = 0.009 Identities = 25/25 (100%) Strand = Plus / Minus Query: 165 ttcgcgggcgaatatttactctttc 189 ||||||||||||||||||||||||| Sbjct: 602 ttcgcgggcgaatatttactctttc 578 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 9,364,002 Number of Sequences: 3902068 Number of extensions: 9364002 Number of successful extensions: 232988 Number of sequences better than 10.0: 2918 Number of HSP's better than 10.0 without gapping: 2890 Number of HSP's successfully gapped in prelim test: 31 Number of HSP's that attempted gapping in prelim test: 221118 Number of HSP's gapped (non-prelim): 10229 length of query: 650 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 627 effective length of database: 17,143,297,704 effective search space: 10748847660408 effective search space used: 10748847660408 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
