Clone Information

BLAST Search Result

Clone Name	rbasd11p10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)	320	2e-87
2	RS3A_HELAN (P49198) 40S ribosomal protein S3a	299	7e-81
3	RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)	298	2e-80
4	RS3A_ARATH (Q42262) 40S ribosomal protein S3a	290	2e-78
5	RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific ...	280	3e-75
6	RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a	241	2e-63
7	RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a	223	4e-58
8	RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformat...	222	8e-58
9	RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a	221	1e-57
10	RS3A_XENTR (Q642T2) 40S ribosomal protein S3a	221	1e-57
11	RS3A_XENLA (Q801S3) 40S ribosomal protein S3a	221	2e-57
12	RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)	221	2e-57
13	RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a	220	3e-57
14	RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a	220	3e-57
15	RS3A_HUMAN (P61247) 40S ribosomal protein S3a	220	3e-57
16	RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a	220	3e-57
17	RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)	220	3e-57
18	RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformatio...	220	4e-57
19	RS3A_MOUSE (P97351) 40S ribosomal protein S3a	220	4e-57
20	RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a	219	7e-57
21	RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)	217	3e-56
22	RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)	216	8e-56
23	RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich prote...	215	1e-55
24	RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)	211	2e-54
25	RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)	203	4e-52
26	RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)	203	4e-52
27	RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)	194	3e-49
28	RS3A_CAEEL (P48154) 40S ribosomal protein S3a	192	1e-48
29	RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)	184	2e-46
30	RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae	82	2e-15
31	RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae	80	7e-15
32	RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae	80	9e-15
33	RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae	80	9e-15
34	RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae	79	2e-14
35	RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae	79	2e-14
36	RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae	79	2e-14
37	RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae	74	6e-13
38	RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae	72	1e-12
39	RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae	71	4e-12
40	RS3A_METTH (O27630) 30S ribosomal protein S3Ae	70	7e-12
41	RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae	69	1e-11
42	RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae	66	1e-10
43	RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae	64	6e-10
44	RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae	60	9e-09
45	RS3A_METJA (P54059) 30S ribosomal protein S3Ae	59	2e-08
46	RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae	56	1e-07
47	RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae	55	2e-07
48	RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae	45	2e-04
49	RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae	44	4e-04

>RS3A_ORYSA (P49397) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 261

 Score =  320 bits (821), Expect = 2e-87
 Identities = 163/183 (89%), Positives = 171/183 (93%), Gaps = 1/183 (0%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           YRKIRLRAEDVQG NVLTNFWGM FTTDKLRSLV+KWQTLIEAHVDVKTTD YMLR+F I
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMSFTTDKLRSLVKKWQTLIEAHVDVKTTDGYMLRLFCI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIM NQA+SCDLKELV+KFIPEVIGKEIEKA
Sbjct: 140 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMANQASSCDLKELVSKFIPEVIGKEIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVA 204
           TSSIFPLQNV+VRKVKILKAPKFDLGKLMEVHGDY KED+G KLDRP  DE + G +EVA
Sbjct: 200 TSSIFPLQNVFVRKVKILKAPKFDLGKLMEVHGDYAKEDIGTKLDRPAEDEAMAG-QEVA 258

Query: 203 AAE 195
           AAE
Sbjct: 259 AAE 261

to top

>RS3A_HELAN (P49198) 40S ribosomal protein S3a|
          Length = 259

 Score =  299 bits (765), Expect = 7e-81
 Identities = 149/181 (82%), Positives = 162/181 (89%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           YRKIRLRAEDVQG NVLTNFWGMD TTDKLRSLV+KWQ+LIEAHVDVKTTDN+ LRMF I
Sbjct: 80  YRKIRLRAEDVQGKNVLTNFWGMDVTTDKLRSLVKKWQSLIEAHVDVKTTDNFTLRMFCI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQVKRTCYAQ+SQI+QIRRKM EIMV QA +CDLKELV KFIPE IG+EIEKA
Sbjct: 140 GFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQAQTCDLKELVQKFIPESIGREIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 201
           TSSI+PLQNV++RKVKILKAPKFD+GKLMEVHGDY EDVGVKLDRP  +E  P A EV  
Sbjct: 200 TSSIYPLQNVFIRKVKILKAPKFDIGKLMEVHGDYSEDVGVKLDRP-AEEAAPEATEVIG 258

Query: 200 A 198
           A
Sbjct: 259 A 259

to top

>RS3A_CATRO (P33444) 40S ribosomal protein S3a (CYC07 protein)|
          Length = 259

 Score =  298 bits (762), Expect = 2e-80
 Identities = 146/180 (81%), Positives = 160/180 (88%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RKIRLRAED+QG NVLTNFWGMDFTTDKLRSLVRKWQ+LIEAHVDVKTTD+Y LRMF I
Sbjct: 80  FRKIRLRAEDIQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIEAHVDVKTTDSYTLRMFCI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ KRTCYAQ+SQIRQIRRKM EIMVNQA SCDLK+LV KFIPE IG+EIEKA
Sbjct: 140 GFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQAQSCDLKDLVQKFIPESIGREIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVAA 201
           TSSI+PLQNV++RKVKILKAPKFDLGKLMEVHGDY ED+G KLDRP  + V    E + A
Sbjct: 200 TSSIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYNEDIGTKLDRPAEEAVAEPTEVIGA 259

to top

>RS3A_ARATH (Q42262) 40S ribosomal protein S3a|
          Length = 261

 Score =  290 bits (743), Expect = 2e-78
 Identities = 145/182 (79%), Positives = 158/182 (86%), Gaps = 1/182 (0%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIEAHVDVKTTD Y LRMF I
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FTKRR NQVKRTCYAQ+SQIRQIRRKM EIMV +A+SCDLKELV KFIPE IG+EIEKA
Sbjct: 140 AFTKRRANQVKRTCYAQSSQIRQIRRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEVA 204
           T  I+PLQNV++RKVKILKAPKFDLGKLMEVHGDY  EDVGVK+DRP  + ++    E+ 
Sbjct: 200 TQGIYPLQNVFIRKVKILKAPKFDLGKLMEVHGDYTAEDVGVKVDRPADETMVEEPTEII 259

Query: 203 AA 198
            A
Sbjct: 260 GA 261

to top

>RS3A_BRARA (P49396) 40S ribosomal protein S3a (S phase-specific protein|
           BIS289)
          Length = 261

 Score =  280 bits (717), Expect = 3e-75
 Identities = 144/183 (78%), Positives = 158/183 (86%), Gaps = 2/183 (1%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           YRKIRLRAEDVQG NVLT FWGMDFTTDKLRSLV+KWQTLIE+HVDVKTTDNY LR+F I
Sbjct: 80  YRKIRLRAEDVQGRNVLTQFWGMDFTTDKLRSLVKKWQTLIESHVDVKTTDNYTLRLFCI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMV-NQAASCDLKELVNKFIPEVIGKEIEK 384
            FTKRR NQVKRTCYAQ+SQIRQIR KM EIM+  +A+SCDLKELV KFIPE IGK+IEK
Sbjct: 140 AFTKRRANQVKRTCYAQSSQIRQIRSKMREIMIKEEASSCDLKELVAKFIPESIGKDIEK 199

Query: 383 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDY-KEDVGVKLDRPDGDEVIPGAEEV 207
           AT  I+PLQNV++RKVKILKAPKFDL KLMEVHGDY  EDVGVK+DRP  DEV+    E+
Sbjct: 200 ATQGIYPLQNVFIRKVKILKAPKFDLRKLMEVHGDYTAEDVGVKVDRP-ADEVVEEPTEI 258

Query: 206 AAA 198
             A
Sbjct: 259 IGA 261

to top

>RS3A_TORRU (Q9XEG7) 40S ribosomal protein S3a|
          Length = 247

 Score =  241 bits (614), Expect = 2e-63
 Identities = 122/164 (74%), Positives = 141/164 (85%), Gaps = 1/164 (0%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RKI+LRAEDVQG NVLTNFWGMDFTTDKLRSLVRKWQ+LI+AHVDVKTTDNY +R+F I
Sbjct: 79  FRKIKLRAEDVQGKNVLTNFWGMDFTTDKLRSLVRKWQSLIQAHVDVKTTDNYQIRIFCI 138

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEK- 384
            FTK+RPN   R  YAQ+SQI  IRRKM EIMV +A +CDLKELV KFIPEVIGKEI++ 
Sbjct: 139 AFTKKRPNHT-RNFYAQSSQI-AIRRKMREIMVKEAQTCDLKELVAKFIPEVIGKEIDEW 196

Query: 383 ATSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 252
            +  I+PLQ+ ++RKVKILKAPKFDL KLMEVHGDY E+VG K+
Sbjct: 197 RSQGIYPLQSTFIRKVKILKAPKFDLMKLMEVHGDYNEEVGAKI 240

to top

>RS3A_TETNG (Q4T8S6) 40S ribosomal protein S3a|
          Length = 265

 Score =  223 bits (569), Expect = 4e-58
 Identities = 109/179 (60%), Positives = 138/179 (77%), Gaps = 9/179 (5%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTKRR NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKRRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           +D G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGTAAKATGDDTGAKVERADGYE 258

to top

>RS3A_ORYLA (O73813) 40S ribosomal protein S3a (V-fos transformation effector|
           protein)
          Length = 265

 Score =  222 bits (566), Expect = 8e-58
 Identities = 108/179 (60%), Positives = 138/179 (77%), Gaps = 9/179 (5%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQV++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA
Sbjct: 140 GFTKKRNNQVRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD---------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           +D G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGAGGAAKASGDDTGAKVERADGYE 258

to top

>RS3A_BRARE (Q6PBY1) 40S ribosomal protein S3a|
          Length = 266

 Score =  221 bits (564), Expect = 1e-57
 Identities = 107/180 (59%), Positives = 138/180 (76%), Gaps = 10/180 (5%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLVTEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ +GK+IEKA
Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSVGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD----------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+           + D G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGSTSAAAKPAEGDTGAKVERADGYE 259

to top

>RS3A_XENTR (Q642T2) 40S ribosomal protein S3a|
          Length = 263

 Score =  221 bits (564), Expect = 1e-57
 Identities = 107/177 (60%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPAGDETGAKVERADGYE 256

to top

>RS3A_XENLA (Q801S3) 40S ribosomal protein S3a|
          Length = 263

 Score =  221 bits (562), Expect = 2e-57
 Identities = 107/177 (60%), Positives = 137/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMFEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGTGKPAGDETGAKVERADGYE 256

to top

>RS3A_EIMTE (O43999) 40S ribosomal protein S3a (EtS3a)|
          Length = 263

 Score =  221 bits (562), Expect = 2e-57
 Identities = 107/177 (60%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMFSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTGEFQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGAGKPSGDEAGAKVERADGYE 256

to top

>RS3A_OPHHA (Q98TX2) 40S ribosomal protein S3a|
          Length = 263

 Score =  220 bits (561), Expect = 3e-57
 Identities = 106/177 (59%), Positives = 137/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N L NF GMD T DK+ S+V+KWQT+IEAH+DVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLINFHGMDLTRDKMCSMVKKWQTMIEAHIDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KMVEIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRTNQIRKTSYAQHQQVRQIRKKMVEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +VYVRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVYVRKVKMLKKPKFELGKLMELHGEGGGSGKPSGDETGAKVERADGYE 256

to top

>RS3A_MACFA (Q4R4Z6) 40S ribosomal protein S3a|
          Length = 263

 Score =  220 bits (561), Expect = 3e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

to top

>RS3A_HUMAN (P61247) 40S ribosomal protein S3a|
          Length = 263

 Score =  220 bits (561), Expect = 3e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

to top

>RS3A_BOVIN (Q56JV9) 40S ribosomal protein S3a|
          Length = 263

 Score =  220 bits (561), Expect = 3e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

to top

>RS3A_FELCA (P61246) 40S ribosomal protein S3a (Fragment)|
          Length = 260

 Score =  220 bits (561), Expect = 3e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 77  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 136

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 137 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 196

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 197 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 253

to top

>RS3A_RAT (P49242) 40S ribosomal protein S3a (V-fos transformation effector|
           protein) [Contains: 40S ribosomal protein S3b]
          Length = 263

 Score =  220 bits (560), Expect = 4e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKTTGDETGAKVERADGYE 256

to top

>RS3A_MOUSE (P97351) 40S ribosomal protein S3a|
          Length = 263

 Score =  220 bits (560), Expect = 4e-57
 Identities = 106/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK+IEKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-------YKEDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGGSSGKAAGDETGAKVERADGYE 256

to top

>RS3A_GECJA (Q6DV02) 40S ribosomal protein S3a|
          Length = 263

 Score =  219 bits (558), Expect = 7e-57
 Identities = 105/177 (59%), Positives = 138/177 (77%), Gaps = 7/177 (3%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L  EDVQG N LTNF GMD T DK+ S+V+KWQT+IEAHVDVKTTD Y+LR+F +
Sbjct: 80  FRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTMIEAHVDVKTTDGYLLRLFCV 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQ+++T YAQ  Q+RQIR+KM+EIM  +  + DLKE+VNK IP+ IGK++EKA
Sbjct: 140 GFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDMEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYK-------EDVGVKLDRPDGDE 231
             SI+PL +V+VRKVK+LK PKF+LGKLME+HG+         ++ G K++R DG E
Sbjct: 200 CQSIYPLHDVFVRKVKMLKKPKFELGKLMELHGEGSSSGKATGDETGAKVERADGYE 256

to top

>RS3A_CANAL (P40910) 40S ribosomal protein S3aE (S1)|
          Length = 255

 Score =  217 bits (552), Expect = 3e-56
 Identities = 103/173 (59%), Positives = 142/173 (82%), Gaps = 1/173 (0%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           YRKI+LR ++VQG N+LTNF G+DFT+DKLRSLVRKWQ+L+EA+V VKT+D+Y+LR+FAI
Sbjct: 80  YRKIKLRVDEVQGKNLLTNFHGLDFTSDKLRSLVRKWQSLVEANVTVKTSDDYVLRVFAI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FTKR+PNQ+K T YAQ+S++R+ R+KM+EI+  + ++C L +L +K IPEVIG+EIEK+
Sbjct: 140 AFTKRQPNQIKETTYAQSSKLREARKKMIEIIEREVSNCTLAQLTSKLIPEVIGREIEKS 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD-YKEDVGVKLDRPDGDEVI 225
           T +IFPLQNV++RKVK+LK PKFD G L+ +HG+   E+ G K+     D V+
Sbjct: 200 TQTIFPLQNVHIRKVKLLKQPKFDWGSLLALHGEGSTEEKGKKVSSGFKDVVL 252

to top

>RS3B_SCHPO (O94438) 40S ribosomal protein S3aE-B (S1-A)|
          Length = 251

 Score =  216 bits (549), Expect = 8e-56
 Identities = 105/163 (64%), Positives = 133/163 (81%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK++LR ED+QG + LT+F G+  T+DKLRSLVRKWQT IEA   +KTTD Y+ R+F I
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGLSITSDKLRSLVRKWQTTIEADQTIKTTDGYLCRVFVI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFT+RR NQVK+T YAQ+SQIR IR+KM +++ NQ +SC ++ELV K IPEVIG+EIE+A
Sbjct: 140 GFTRRRANQVKKTTYAQSSQIRAIRQKMFQVIQNQTSSCSMRELVQKLIPEVIGREIERA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 252
           T SIFPLQNV VRKVKILKAPK D  KL+E+HG+  +DVG K+
Sbjct: 200 TGSIFPLQNVLVRKVKILKAPKHDAQKLLELHGE-SQDVGTKV 241

to top

>RS3A_APLCA (P49395) 40S ribosomal protein S3a (Lysine-rich protein KRP-A)|
          Length = 264

 Score =  215 bits (548), Expect = 1e-55
 Identities = 107/178 (60%), Positives = 138/178 (77%), Gaps = 8/178 (4%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L AE+VQG NVLTNF GM  T DKL S+V+KWQTLIEA+VDVKTTD Y+LR+FAI
Sbjct: 80  FRKFKLIAEEVQGRNVLTNFSGMSLTRDKLCSMVKKWQTLIEANVDVKTTDGYLLRVFAI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFTK+R NQVK+TCYAQ +Q++ IR+KMVEI+  + +S D+KE+VNK IP+ IGK+IEK+
Sbjct: 140 GFTKKRNNQVKKTCYAQHAQVKAIRKKMVEIVSREVSSNDMKEVVNKLIPDSIGKDIEKS 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 231
              I+PL +V + KVK+LK PKFD+GKLME+HG+           + G K+DR DG E
Sbjct: 200 CQGIYPLHDVLIHKVKVLKKPKFDVGKLMELHGEGSTTTSKGVTSEGGEKVDRVDGYE 257

to top

>RS3A_SCHPO (Q09781) 40S ribosomal protein S3aE-A (S1-A)|
          Length = 251

 Score =  211 bits (537), Expect = 2e-54
 Identities = 103/163 (63%), Positives = 132/163 (80%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK++LR ED+QG + LT+F G D T+DKLRSLVRKWQ+ IEA+  +KTTD Y+ R+F I
Sbjct: 80  FRKVKLRVEDIQGKSCLTSFNGFDMTSDKLRSLVRKWQSTIEANQTIKTTDGYLCRIFVI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFT RR NQVK+T YAQ+SQIR I +KM +++ NQA  C +KELV K IPEVIG+ IEKA
Sbjct: 140 GFTSRRVNQVKKTTYAQSSQIRAIHQKMFQVIQNQANGCSMKELVQKLIPEVIGRAIEKA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKL 252
           T++I+PLQNV+VRKVKILKAPK D  KL+E+HG+  +DVG K+
Sbjct: 200 TNNIYPLQNVFVRKVKILKAPKHDAQKLLELHGE-SQDVGSKV 241

to top

>RS3B_YEAST (P23248) 40S ribosomal protein S1-B (RP10B)|
          Length = 254

 Score =  203 bits (517), Expect = 4e-52
 Identities = 97/154 (62%), Positives = 126/154 (81%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK++LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI
Sbjct: 80  FRKVKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FT+++ NQVKR  YAQ+S IR IR+ + EI+  +  +  L +L +K IPEVI KEIE A
Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEILTREVQNSTLAQLTSKLIPEVINKEIENA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 279
           T  IFPLQN++VRKVK+LK PKFD+G LM +HG+
Sbjct: 200 TKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233

to top

>RS3A_YEAST (P33442) 40S ribosomal protein S1-A (RP10A)|
          Length = 254

 Score =  203 bits (517), Expect = 4e-52
 Identities = 98/154 (63%), Positives = 125/154 (81%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RKI+LR ++VQG N+LTNF GMDFTTDKLRS+VRKWQTLIEA+V VKT+D+Y+LR+FAI
Sbjct: 80  FRKIKLRVDEVQGKNLLTNFHGMDFTTDKLRSMVRKWQTLIEANVTVKTSDDYVLRIFAI 139

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FT+++ NQVKR  YAQ+S IR IR+ + EI+  +     L +L +K IPEVI KEIE A
Sbjct: 140 AFTRKQANQVKRHSYAQSSHIRAIRKVISEILTKEVQGSTLAQLTSKLIPEVINKEIENA 199

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 279
           T  IFPLQN++VRKVK+LK PKFD+G LM +HG+
Sbjct: 200 TKDIFPLQNIHVRKVKLLKQPKFDVGALMALHGE 233

to top

>RS3A_DROME (P55830) 40S ribosomal protein S3a (C3 protein)|
          Length = 267

 Score =  194 bits (492), Expect = 3e-49
 Identities = 95/178 (53%), Positives = 125/178 (70%), Gaps = 8/178 (4%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK RL AEDVQ  NVL NF GMD TTDK RS+V+KWQTLIEA V+ KT D Y+LR+F I
Sbjct: 83  FRKFRLIAEDVQDRNVLCNFHGMDLTTDKYRSMVKKWQTLIEAIVEAKTVDGYLLRVFCI 142

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFT +     ++TCYAQ SQ+R+IR +M +I+ N+ +  DLK+LVNK   + I K+IEK+
Sbjct: 143 GFTAKDQQSQRKTCYAQQSQVRKIRARMTDIITNEVSGADLKQLVNKLALDSIAKDIEKS 202

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--------YKEDVGVKLDRPDGDE 231
              I+PL +VY+RKVK+LK P+FD+ KL+E+HGD             G  +DRP+G E
Sbjct: 203 CQRIYPLHDVYIRKVKVLKKPRFDVSKLLELHGDGGGKSVEAVVSSEGAVIDRPEGYE 260

to top

>RS3A_CAEEL (P48154) 40S ribosomal protein S3a|
          Length = 256

 Score =  192 bits (487), Expect = 1e-48
 Identities = 97/172 (56%), Positives = 124/172 (72%), Gaps = 2/172 (1%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L AEDVQG NVLTNF  M  T DKL S+V+KW TLIEA+  VKTTD Y LR+F I
Sbjct: 78  FRKFKLIAEDVQGKNVLTNFHAMSMTHDKLCSIVKKWHTLIEANTAVKTTDGYTLRVFVI 137

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FTK+  NQVK+T Y + S+IR+IR +M+  +  +   CDLKE+V+K IP+ IGK+IEK 
Sbjct: 138 AFTKKSVNQVKKTSYTKTSKIRKIRSEMIGCIEKEVTGCDLKEVVSKLIPDSIGKDIEKT 197

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD--YKEDVGVKLDRPDGDE 231
            S ++PLQ VY+RKVKI+K PK DLG+L ++HGD       G K+DRPD  E
Sbjct: 198 CSKLYPLQEVYIRKVKIIKRPKVDLGRLHDLHGDSITVGADGEKVDRPDDYE 249

to top

>RS3A_ANOGA (P52813) 40S ribosomal protein S3a (C3 protein)|
          Length = 268

 Score =  184 bits (468), Expect = 2e-46
 Identities = 90/154 (58%), Positives = 113/154 (73%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           +RK +L AE V G +VLTNF GM  TTDKLRS+V KWQTLIE  VDVKTTD +MLR+F I
Sbjct: 83  FRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVNKWQTLIECSVDVKTTDGFMLRVFCI 142

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
           GFT +     ++TCYAQ SQI+ IR KM  I+  +  S DLK +V K +P+ I K+IEKA
Sbjct: 143 GFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTDLKGVVEKLLPDSIAKDIEKA 202

Query: 380 TSSIFPLQNVYVRKVKILKAPKFDLGKLMEVHGD 279
              ++PL +VY+RKVK+LK P+FDL  LME+HGD
Sbjct: 203 CQVVYPLHDVYIRKVKVLKKPRFDLSSLMELHGD 236

to top

>RS3A_PYRFU (Q8TZE1) 30S ribosomal protein S3Ae|
          Length = 198

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 48/140 (34%), Positives = 72/140 (51%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 65  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRKTTRIDGIFNITTKDGYKLRVMAMAI 124

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 125 AMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLESVNGKIAAEIAKEAK 175

Query: 374 SIFPLQNVYVRKVKILKAPK 315
            I+PL+   +RK+K+L+ P+
Sbjct: 176 KIYPLRKAEIRKIKVLEEPQ 195

to top

>RS3A_PYRHO (O57803) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 80.1 bits (196), Expect = 7e-15
 Identities = 48/140 (34%), Positives = 71/140 (50%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 67  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYRLRVMAMAI 126

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 127 AMRR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEGK 177

Query: 374 SIFPLQNVYVRKVKILKAPK 315
            I+PL+   +RK+K+L  P+
Sbjct: 178 KIYPLKKAEIRKIKVLGEPE 197

to top

>RS3A_PYRAB (Q9V2K7) 30S ribosomal protein S3Ae|
          Length = 199

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 48/140 (34%), Positives = 71/140 (50%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +  DV+G N  T F GM      +RSLVR+  T I+   ++ T D Y LR+ A+  
Sbjct: 66  KLYFQVYDVKGQNAYTKFKGMKLARSYIRSLVRRRTTRIDGIFNITTKDGYKLRVMAMVI 125

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
             RR          Q SQ R IR+ M EI+  +A   + K+ V + +   I  EI K   
Sbjct: 126 AARR---------IQTSQERAIRKIMQEIIYKKAEELNFKDFVLEAVNGKIAAEIAKEAK 176

Query: 374 SIFPLQNVYVRKVKILKAPK 315
            I+PL+   +RK+K+L  P+
Sbjct: 177 KIYPLKKAEIRKIKVLGEPE 196

to top

>RS3A_ARCFU (O27964) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 79.7 bits (195), Expect = 9e-15
 Identities = 47/141 (33%), Positives = 75/141 (53%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           Y+K+  +   V G N  T FW  + T + L SL R+  + IE  VDV T D Y LR+ ++
Sbjct: 66  YKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLRVKSV 125

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
            FT RR          + SQ R IR  M +I+V +A+S +  + + + +   +  EI K 
Sbjct: 126 VFTVRR---------CKTSQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAEIYKN 176

Query: 380 TSSIFPLQNVYVRKVKILKAP 318
              I+P++ V +RK+++L  P
Sbjct: 177 AKKIYPIRRVEIRKIELLAEP 197

to top

>RS3A_METAC (Q8TKI9) 30S ribosomal protein S3Ae|
          Length = 203

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 47/139 (33%), Positives = 78/139 (56%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDVKT D Y++R+    F
Sbjct: 65  KVILRINNVVGDIATTDLMGHELTTDYIRSIVKRQTSRIDANVDVKTKDGYVIRVKPTCF 124

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T +R         A++SQ++ IR  MVEI+  +AA  D +  + + I   +   I +   
Sbjct: 125 TIKR---------ARSSQMQAIREMMVEIVKKRAAESDFETFMQEAILGRLSAAIYRQAK 175

Query: 374 SIFPLQNVYVRKVKILKAP 318
            I+PL+ V +RK ++   P
Sbjct: 176 FIYPLRRVEIRKTEVETIP 194

to top

>RS3A_PYRAE (Q8ZT21) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 40/139 (28%), Positives = 75/139 (53%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K++ +   V+G+  LT F G++ T D +RSLVRK  + + A  +VKT D  ++R+  +G 
Sbjct: 74  KLKFQIHRVEGLKALTRFKGLELTRDYIRSLVRKGTSKVTAITEVKTKDGMVMRIAVLGI 133

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T  R    +++          +R+KM+E +V +AA  D  + + + +   +  ++     
Sbjct: 134 TTHRIGTAQKSA---------MRKKMIETLVKKAAELDSGQFLKEILEGTLAADLFIVAK 184

Query: 374 SIFPLQNVYVRKVKILKAP 318
            I P++ V + K+K+LK P
Sbjct: 185 KIAPMRKVEIAKIKVLKYP 203

to top

>RS3A_METKA (Q8TVD1) 30S ribosomal protein S3Ae|
          Length = 211

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 45/143 (31%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  R  DV+G    + F G     D +RSLVR+  + I+  +DV T D Y +R+  + F
Sbjct: 58  KVFFRIYDVEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAGLAF 117

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIE 387
           T RR         A+ SQ R IR++M +++   A  CD  E + + +     E I ++I+
Sbjct: 118 TTRR---------AKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPEQIK 168

Query: 386 KATSSIFPLQNVYVRKVKILKAP 318
           +A   I+P++   +RK ++L+ P
Sbjct: 169 EAGRKIYPIRQAEIRKTEVLEEP 191

to top

>RS3A_METMA (Q8Q0F2) 30S ribosomal protein S3Ae|
          Length = 204

 Score = 73.6 bits (179), Expect = 6e-13
 Identities = 43/139 (30%), Positives = 78/139 (56%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+ LR  +V G    T+  G + TTD +RS+V++  + I+A+VDV+T D +++R+    F
Sbjct: 65  KVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTKDGFVIRVKPTCF 124

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T +R         A++SQ++ IR  MV+I+  +A+  D +  + + I   +   I +   
Sbjct: 125 TIKR---------ARSSQMQAIREMMVDIVKKRASETDFETFMQEAILGRLSAAIYRQAK 175

Query: 374 SIFPLQNVYVRKVKILKAP 318
            I+PL+ V +RK ++   P
Sbjct: 176 FIYPLRRVEIRKTQVEAMP 194

to top

>RS3A_SULTO (Q975F8) 30S ribosomal protein S3Ae|
          Length = 193

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 46/141 (32%), Positives = 71/141 (50%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           Y  +  R   V+G  +LT F G + + D +RSLVR+  + I+A  DV T D Y+LR+  +
Sbjct: 61  YVHLYFRVIGVEGDRLLTRFAGHELSRDYIRSLVRRKSSKIDAITDVTTKDGYVLRVKGL 120

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
             T  R         A  SQ  +IR+ +  I+  +A+     E V   +   +  +I + 
Sbjct: 121 ALTTYR---------AHRSQKTEIRKIIWNILSTRASETTFDEFVQDIVFGKLSNDIFQQ 171

Query: 380 TSSIFPLQNVYVRKVKILKAP 318
              I+PL+ V V K K+LKAP
Sbjct: 172 AKKIYPLRKVEVEKTKLLKAP 192

to top

>RS3A_SULAC (Q4JB17) 30S ribosomal protein S3Ae|
          Length = 197

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 45/133 (33%), Positives = 68/133 (51%)
 Frame = -3

Query: 713 DVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQ 534
           ++ G  + T F+G + + D +RSLVR+  + I A VDV T D YMLR+  +  T  R   
Sbjct: 73  NISGDKLSTIFYGHELSRDYIRSLVRRKSSKINAVVDVTTKDGYMLRVKGLVLTTYR--- 129

Query: 533 VKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQN 354
                 A  SQ   IR+ + +I   +A   D  + V   I   +  +I +    I+PL+ 
Sbjct: 130 ------AHISQKTAIRKVISDITRKKAEESDFDQFVQDVIFGKLSNDIFQEAKKIYPLRK 183

Query: 353 VYVRKVKILKAPK 315
           V + K K+LKAPK
Sbjct: 184 VEIEKTKLLKAPK 196

to top

>RS3A_METTH (O27630) 30S ribosomal protein S3Ae|
          Length = 195

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 42/141 (29%), Positives = 73/141 (51%)
 Frame = -3

Query: 740 YRKIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAI 561
           Y K++ + + V G    T F G   TTD +RS++R+  + ++A V V+T D Y L++  +
Sbjct: 63  YVKLKFQIDSVAGSEATTRFIGHQVTTDYVRSMIRRGTSRVDAPVIVETKDGYKLKVHPL 122

Query: 560 GFTKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKA 381
             T RR         A++SQ + +R+ + E +   A+    +ELV   +   I  EI   
Sbjct: 123 AITIRR---------AKSSQQKYMRQSIEEHLREIASEKTFEELVEGIVTGKIASEIYHQ 173

Query: 380 TSSIFPLQNVYVRKVKILKAP 318
              I+PL+ V + K ++L+ P
Sbjct: 174 AKKIYPLKRVEIIKSRVLEEP 194

to top

>RS3A_PYRKO (Q5JGM4) 30S ribosomal protein S3Ae|
          Length = 200

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 42/139 (30%), Positives = 67/139 (48%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +  DV+G N  T F G       +RSLVR+  T ++   ++ T D Y LR+  +  
Sbjct: 69  KLYFQVYDVKGQNAYTKFKGHTLARSYIRSLVRRRTTRVDGIFNITTKDGYKLRVMGMVI 128

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
             RR          Q SQ R IR+ + +I+  +A   +  + V + +   I  EI K   
Sbjct: 129 AYRR---------IQTSQERAIRKIIQDIIYKKAEELNFADFVLQSVNGQIASEIAKEAR 179

Query: 374 SIFPLQNVYVRKVKILKAP 318
            I+P++   VRK+K+L  P
Sbjct: 180 KIYPIKRAEVRKIKVLAEP 198

to top

>RS3A_HALMA (Q5V296) 30S ribosomal protein S3Ae|
          Length = 213

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 44/167 (26%), Positives = 81/167 (48%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +  +V   +  T F   + T D LRSLVR+  + +EA++ V TTD+Y +++  +  
Sbjct: 62  KLTFKINEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAV 121

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T ++         A ASQ + IRR M++++   A     ++L++  +   +   I     
Sbjct: 122 TTKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAK 172

Query: 374 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGD 234
            I+PL+ V ++K  +   P+       EV  +  E+  V +D  D D
Sbjct: 173 DIYPLRRVEIKKTTLEARPE-------EVAAE--EETAVDVDEEDVD 210

to top

>RS3A_SULSO (Q9UXD4) 30S ribosomal protein S3Ae|
          Length = 208

 Score = 63.5 bits (153), Expect = 6e-10
 Identities = 39/139 (28%), Positives = 73/139 (52%)
 Frame = -3

Query: 707 QGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQVK 528
           +G  ++T F G + + D LRSL+R+  + I +  DV T D Y++R+  +  T  + +Q +
Sbjct: 73  EGDRLITRFVGHELSRDYLRSLIRRKSSKINSIFDVTTKDGYVVRVKGLVLTTYKCHQSQ 132

Query: 527 RTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNVY 348
           +T          IR+ + E +  +A+     +   + +   +  EI +A   I+PL+   
Sbjct: 133 KTA---------IRKIINETVSKKASELSFDDFTQEVVFGRLANEIFEAAKKIYPLRKAE 183

Query: 347 VRKVKILKAPKFDLGKLME 291
           + K K+LK P+ +LGK +E
Sbjct: 184 IEKTKVLKVPE-NLGKQVE 201

to top

>RS3A_HALSA (Q9HRA5) 30S ribosomal protein S3Ae|
          Length = 206

 Score = 59.7 bits (143), Expect = 9e-09
 Identities = 38/140 (27%), Positives = 67/140 (47%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  + +DV   +  T F   + T D  RSLVR+  + +   V V TTD+Y +R+  + +
Sbjct: 61  KLTFQIDDVGSDSASTQFVQAELTRDYQRSLVRRGSSKVAVTVTVLTTDDYRVRIQPVAY 120

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T ++ +Q         SQ   IRR M++++         + L+N  I   +   I    +
Sbjct: 121 TTKQADQ---------SQQHAIRRTMIDLVEEAGEERTFEALLNSIIEGRLSSAIYDEAN 171

Query: 374 SIFPLQNVYVRKVKILKAPK 315
           +I+PL+ V V K  +   P+
Sbjct: 172 TIYPLRRVEVEKATLEAHPE 191

to top

>RS3A_METJA (P54059) 30S ribosomal protein S3Ae|
          Length = 222

 Score = 58.9 bits (141), Expect = 2e-08
 Identities = 36/132 (27%), Positives = 67/132 (50%)
 Frame = -3

Query: 710 VQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRRPNQV 531
           V G   +  ++G D T + ++S +R+ ++ I+A +DVKT D + +R  A+  T  R N  
Sbjct: 80  VTGNKAIAQYYGHDTTREFMKSQIRRRRSRIDAILDVKTQDGHKIRTKAMVLTAYRANTK 139

Query: 530 KRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFPLQNV 351
           +++          IR+KM EI+   A      + V   +   + ++I+     IFP++NV
Sbjct: 140 QKS---------DIRKKMEEIIKAMAKEKTFPQYVQAMLFGEMAEKIKNECKKIFPIKNV 190

Query: 350 YVRKVKILKAPK 315
            + K ++L   K
Sbjct: 191 IIYKSEVLSLAK 202

to top

>RS3A_AERPE (Q9YCV8) 30S ribosomal protein S3Ae|
          Length = 221

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 4/143 (2%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K+  +   V+G    T F G +   D +R L R+  + +    +V T D Y LR+ A+ F
Sbjct: 69  KMYFQVVRVEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGYGLRVTAMAF 128

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFI----PEVIGKEIE 387
           T++R          + SQ   IR+ M EI+  +A    L EL+   +       +   I+
Sbjct: 129 TRQR---------CKTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDHEGSLAYLID 179

Query: 386 KATSSIFPLQNVYVRKVKILKAP 318
           ++   I+PL+ V + K K+L  P
Sbjct: 180 ESARKIYPLRKVEIAKSKLLWVP 202

to top

>RS3A_THEVO (Q978Z2) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 40/150 (26%), Positives = 70/150 (46%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K   R  + +G    T F G     D +R LVR+ +  I+   DVKT+DN ++ +  +  
Sbjct: 66  KALFRITNCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSIITVKIVVV 125

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           T  +    K+          QIR+ + + ++N+  S    E V   I + I  ++  AT 
Sbjct: 126 TDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIYNDMISATK 176

Query: 374 SIFPLQNVYVRKVKILKAPKFDLGKLMEVH 285
            I+PL+ + VRK +++      L  + E+H
Sbjct: 177 DIYPLKKIEVRKSELV-----SLSGISEIH 201

to top

>RS3A_THEAC (Q9HJ08) 30S ribosomal protein S3Ae|
          Length = 215

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 38/177 (21%), Positives = 75/177 (42%)
 Frame = -3

Query: 734 KIRLRAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGF 555
           K   R    +G    T F G     D +R LVR+ +  I+   DVKT+D  ++ +  +  
Sbjct: 66  KALFRITGCEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDGSIITVKIVVV 125

Query: 554 TKRRPNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATS 375
           +  +    K++         +IR+ +   +V++ +     + V   I +    ++ +AT 
Sbjct: 126 SDGKLTNTKKS---------EIRKALTSFIVSKGSQLSYADFVRYLIGDDSYNDMVEATK 176

Query: 374 SIFPLQNVYVRKVKILKAPKFDLGKLMEVHGDYKEDVGVKLDRPDGDEVIPGAEEVA 204
           +I+PL+ + +RK            +L+ + G         +  P  +E  PG E +A
Sbjct: 177 NIYPLRKIEIRK-----------SELVSLSG---------MQEPQKNEPAPGGEAIA 213

to top

>RS3A_PICTO (Q6KYU3) 30S ribosomal protein S3Ae|
          Length = 209

 Score = 44.3 bits (103), Expect = 4e-04
 Identities = 29/132 (21%), Positives = 59/132 (44%)
 Frame = -3

Query: 722 RAEDVQGMNVLTNFWGMDFTTDKLRSLVRKWQTLIEAHVDVKTTDNYMLRMFAIGFTKRR 543
           R ++  G    T F G   + D +R +VR+ +  I+  +  KT D Y L +  +  +  +
Sbjct: 69  RVKECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRLVIKIVLVSDSK 128

Query: 542 PNQVKRTCYAQASQIRQIRRKMVEIMVNQAASCDLKELVNKFIPEVIGKEIEKATSSIFP 363
               KR          ++R K++  +  +  S  L EL    I + +  +I      ++P
Sbjct: 129 LTANKRG---------EVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIVDTLKDVYP 179

Query: 362 LQNVYVRKVKIL 327
           ++ + +RK ++L
Sbjct: 180 IKKIEIRKSEVL 191


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,651,644
Number of Sequences: 219361
Number of extensions: 1802853
Number of successful extensions: 4963
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 4780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4941
length of database: 80,573,946
effective HSP length: 109
effective length of database: 56,663,597
effective search space used: 7762912789
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result