>RBS_HORVU (Q40004) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 174
Score = 132 bits (331), Expect = 1e-30
Identities = 78/146 (53%), Positives = 85/146 (58%), Gaps = 7/146 (4%)
Frame = -1
Query: 633 VSNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXX 454
VSNGGRIRCMQVWPIEGIKKFETLSYLPPL+TE + +
Sbjct: 38 VSNGGRIRCMQVWPIEGIKKFETLSYLPPLSTEALLKQ-VDYLIRSKWVPCLEFSKVGFI 96
Query: 453 XXSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIG 295
SPGYYD Y M + P VLN EYPDAYVRIIG
Sbjct: 97 FREHNASPGYYD--------GRYWTMWKLPMFGCTDATQVLNEVEEVKKEYPDAYVRIIG 148
Query: 294 FDNLRQVQCVSFIAFRPPGCEESGKA 217
FDN+RQVQCVSFIAF+PPGC+ESGKA
Sbjct: 149 FDNMRQVQCVSFIAFKPPGCQESGKA 174
Score = 59.7 bits (143), Expect(2) = 3e-17
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
+VDY IRSKWVPCLEFSKVGF+FREHN P
Sbjct: 75 QVDYLIRSKWVPCLEFSKVGFIFREHNASP 104
Score = 48.5 bits (114), Expect(2) = 3e-17
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 102 ASPGYYDGRYWTMWKLPMFGCTD 124
>RBS3_WHEAT (P07398) Ribulose bisphosphate carboxylase small chain clone 512|
(EC 4.1.1.39) (RuBisCO small subunit) (Fragment)
Length = 113
Score = 82.4 bits (202), Expect(2) = 2e-27
Identities = 46/80 (57%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Frame = -1
Query: 435 SPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
SPGYYD Y M + P V+N EYPDAYVRIIGFDN+RQ
Sbjct: 42 SPGYYD--------GRYWTMWKLPMFGCTDATQVINEVEEVKKEYPDAYVRIIGFDNMRQ 93
Query: 276 VQCVSFIAFRPPGCEESGKA 217
VQCVSFIAF+PPGCEESGKA
Sbjct: 94 VQCVSFIAFKPPGCEESGKA 113
Score = 59.7 bits (143), Expect(2) = 2e-27
Identities = 25/30 (83%), Positives = 27/30 (90%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
+VDY IRSKWVPCLEFSKVGF+FREHN P
Sbjct: 14 QVDYLIRSKWVPCLEFSKVGFIFREHNASP 43
Score = 48.5 bits (114), Expect = 2e-05
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 41 ASPGYYDGRYWTMWKLPMFGCTD 63
>RBS_MALSP (Q02980) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 97.8 bits (242), Expect = 2e-20
Identities = 57/138 (41%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G+KKFETLSYLPPL+TE +
Sbjct: 53 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSTESLAKEVDYLLRKNWVPCLEFELEHGFVY 112
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP +++RIIGF
Sbjct: 113 RENHRSPGYYD--------GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGF 164
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 165 DNVRQVQCISFIAYKPAG 182
Score = 41.6 bits (96), Expect = 0.002
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R WVPCLEF + GFV+RE++R P
Sbjct: 90 VDYLLRKNWVPCLEFELEHGFVYRENHRSP 119
>RBS_PYRPY (P24007) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 96.7 bits (239), Expect = 5e-20
Identities = 56/138 (40%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G+KKFETLSYLPPL++E +
Sbjct: 53 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKEVDYLLRKNWVPCLEFELETGFVY 112
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP +++RIIGF
Sbjct: 113 RENHRSPGYYD--------GRYWTMWKLPMFGCTDSSQVLKELEEAKKAYPQSFIRIIGF 164
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 165 DNVRQVQCISFIAYKPAG 182
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R WVPCLEF + GFV+RE++R P
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSP 119
>RBS_MAIZE (P05348) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 170
Score = 95.1 bits (235), Expect = 2e-19
Identities = 58/141 (41%), Positives = 71/141 (50%), Gaps = 7/141 (4%)
Frame = -1
Query: 633 VSNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXX 454
VSNGGRIRCMQVWP G KKFETLSYLPPL+T+ + +
Sbjct: 39 VSNGGRIRCMQVWPAYGNKKFETLSYLPPLSTDDLLKQ-VDYLLRNGWIPCLEFSKVGFV 97
Query: 453 XXSTTGSPGYYDXPILDNVEAAYVRMHRPPHXVLNXXX-------XXXXEYPDAYVRIIG 295
+ SP YYD Y M + P N YPDA+ R+IG
Sbjct: 98 YRENSTSPCYYD--------GRYWTMWKLPMFGCNDATQVYKELQEAIKSYPDAFHRVIG 149
Query: 294 FDNLRQVQCVSFIAFRPPGCE 232
FDN++Q QCVSFIA++PPG +
Sbjct: 150 FDNIKQTQCVSFIAYKPPGSD 170
Score = 49.3 bits (116), Expect(2) = 2e-12
Identities = 19/30 (63%), Positives = 26/30 (86%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
+VDY +R+ W+PCLEFSKVGFV+RE++ P
Sbjct: 76 QVDYLLRNGWIPCLEFSKVGFVYRENSTSP 105
Score = 42.4 bits (98), Expect(2) = 2e-12
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 416 GRYWTMWKLPMFGCTD 369
GRYWTMWKLPMFGC D
Sbjct: 110 GRYWTMWKLPMFGCND 125
>RBS_MANES (Q42915) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 94.4 bits (233), Expect = 3e-19
Identities = 55/139 (39%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGG+++CM+VWP G+KKFETLSYLPPLT E
Sbjct: 52 SNGGKVQCMKVWPTLGMKKFETLSYLPPLTREQLASEVEYLLRSGWIPCLEFELEHGLVY 111
Query: 450 XSTTGSPGYYD--------XPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
PGYYD P+ +AA VL +PD Y RIIG
Sbjct: 112 REHARVPGYYDGRYWTMWKLPMFGCTDAA---------QVLKELDELIKHHPDGYARIIG 162
Query: 294 FDNLRQVQCVSFIAFRPPG 238
FDN+RQVQC+SF+A++PPG
Sbjct: 163 FDNVRQVQCISFLAYKPPG 181
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/32 (56%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
S V+Y +RS W+PCLEF + G V+REH R+P
Sbjct: 87 SEVEYLLRSGWIPCLEFELEHGLVYREHARVP 118
>RBS_BETVE (Q96542) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 94.4 bits (233), Expect = 3e-19
Identities = 57/138 (41%), Positives = 69/138 (50%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G+KKFETLSYLPPL++E +
Sbjct: 52 SNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAKEVDYLLRKNLIPCLEFELEHGFVY 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 112 REHNRSPGYYD--------GRYWTMWKLPMFGCNDSSQVLKELEECKKAYPSAFIRIIGF 163
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN RQVQ +SFIA++PPG
Sbjct: 164 DNKRQVQIISFIAYKPPG 181
Score = 40.8 bits (94), Expect = 0.003
Identities = 18/30 (60%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R +PCLEF + GFV+REHNR P
Sbjct: 89 VDYLLRKNLIPCLEFELEHGFVYREHNRSP 118
>RBS3_AMAHP (Q9XGX4) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 180
Score = 94.0 bits (232), Expect = 3e-19
Identities = 59/138 (42%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPL+
Sbjct: 50 SNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNNGWIPCIEFELEHPFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
SPGY D Y M + P VLN YP A++RIIGF
Sbjct: 110 RENHRSPGYQD--------GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN RQVQCVSFIAF+PPG
Sbjct: 162 DNKRQVQCVSFIAFKPPG 179
Score = 46.6 bits (109), Expect(2) = 5e-09
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 431 PGTTTGRYWTMWKLPMFGCTD 369
PG GRYWTMWKLPM+GCTD
Sbjct: 116 PGYQDGRYWTMWKLPMYGCTD 136
Score = 33.5 bits (75), Expect(2) = 5e-09
Identities = 13/32 (40%), Positives = 23/32 (71%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
++V Y + + W+PC+EF + FV+RE++R P
Sbjct: 85 AQVQYLLNNGWIPCIEFELEHPFVYRENHRSP 116
>RBS2_SPIOL (Q43832) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 180
Score = 93.6 bits (231), Expect = 4e-19
Identities = 56/138 (40%), Positives = 71/138 (51%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP + +K++ETLSYLPPLTT+
Sbjct: 50 SNGGRVQCMKVWPTQNMKRYETLSYLPPLTTDQLARQVDYLLNNKWVPCLEFETDHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VLN EYP+A++RIIGF
Sbjct: 110 REHHNSPGYYD--------GRYWTMWKLPMFGCTDPAQVLNELEECKKEYPNAFIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
D+ RQVQCVSFIA++P G
Sbjct: 162 DSNRQVQCVSFIAYKPAG 179
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/31 (58%), Positives = 24/31 (77%), Gaps = 1/31 (3%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
+VDY + +KWVPCLEF + GFV+REH+ P
Sbjct: 86 QVDYLLNNKWVPCLEFETDHGFVYREHHNSP 116
>RBS4_MESCR (Q08184) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 183
Score = 93.2 bits (230), Expect = 6e-19
Identities = 55/136 (40%), Positives = 69/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G+KKFETLSYLPPL+ E +
Sbjct: 51 SNGGRVQCMQVWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A++RIIGF
Sbjct: 111 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQCVSFIA++P
Sbjct: 163 DNVRQVQCVSFIAYKP 178
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 88 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 117
>RBS_MEDSA (O65194) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 93.2 bits (230), Expect = 6e-19
Identities = 59/136 (43%), Positives = 66/136 (48%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP G KKFETLSYLPPLT E +
Sbjct: 50 SNGGRVNCMQVWPPVGKKKFETLSYLPPLTEEQLAKEVEYLIRKGWIPCLEFELEKGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M R P VL EYPD+++RIIGF
Sbjct: 110 RENHRSPGYYD--------GRYWTMWRLPLFGATDSSQVLKELADCKAEYPDSFIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA P
Sbjct: 162 DNVRQVQCISFIAHTP 177
Score = 40.0 bits (92), Expect = 0.006
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y IR W+PCLEF + GFV+RE++R P
Sbjct: 87 VEYLIRKGWIPCLEFELEKGFVYRENHRSP 116
>RBS_HEVBR (P29684) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 183
Score = 92.8 bits (229), Expect = 7e-19
Identities = 57/140 (40%), Positives = 67/140 (47%), Gaps = 7/140 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G K +ETLSYLPPLT E +
Sbjct: 52 SNGGRVQCMQVWPPRGKKFYETLSYLPPLTREQLAKEVEYLLRKGWVPCLEFELEHGTVY 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YPD Y RIIGF
Sbjct: 112 REYHRSPGYYD--------GRYWTMWKLPMFGCTDAVQVLQELDEMIKAYPDCYGRIIGF 163
Query: 291 DNLRQVQCVSFIAFRPPGCE 232
DN+RQVQC+SF+A++P G E
Sbjct: 164 DNVRQVQCISFLAYKPKGAE 183
Score = 36.6 bits (83), Expect = 0.064
Identities = 16/30 (53%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R WVPCLEF + G V+RE++R P
Sbjct: 89 VEYLLRKGWVPCLEFELEHGTVYREYHRSP 118
>RBS6_LEMGI (P19312) Ribulose bisphosphate carboxylase small chain SSU5B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU5B)
Length = 177
Score = 92.8 bits (229), Expect = 7e-19
Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVY 108
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ YP+ +VRIIGF
Sbjct: 109 RENHASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGF 160
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQC+SFIA++P
Sbjct: 161 DNKRQVQCISFIAYKP 176
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 113 ASPGYYDGRYWTMWKLPMFGCTD 135
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE++ P
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASP 115
>RBS5_LEMGI (P19311) Ribulose bisphosphate carboxylase small chain SSU5A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU5A)
Length = 177
Score = 92.8 bits (229), Expect = 7e-19
Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVY 108
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ YP+ +VRIIGF
Sbjct: 109 RENHASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGF 160
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQC+SFIA++P
Sbjct: 161 DNKRQVQCISFIAYKP 176
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 113 ASPGYYDGRYWTMWKLPMFGCTD 135
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE++ P
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASP 115
>RBS4_LEMGI (P19310) Ribulose bisphosphate carboxylase small chain SSU40B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU40B)
Length = 177
Score = 92.8 bits (229), Expect = 7e-19
Identities = 56/136 (41%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 50 SNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVY 108
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ YP+ +VRIIGF
Sbjct: 109 RENHASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGF 160
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQC+SFIA++P
Sbjct: 161 DNKRQVQCISFIAYKP 176
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 113 ASPGYYDGRYWTMWKLPMFGCTD 135
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE++ P
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASP 115
>RBS3_MESCR (Q08183) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 183
Score = 91.7 bits (226), Expect = 2e-18
Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPL+ E +
Sbjct: 51 SNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A++RIIGF
Sbjct: 111 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA++P
Sbjct: 163 DNVRQVQCISFIAYKP 178
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 88 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 117
>RBS2_LEMGI (P19308) Ribulose bisphosphate carboxylase small chain SSU26,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU26)
Length = 177
Score = 91.7 bits (226), Expect = 2e-18
Identities = 55/136 (40%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGG++ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 50 SNGGKVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVY 108
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ YP+ +VRIIGF
Sbjct: 109 RENHASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGF 160
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQC+SFIA++P
Sbjct: 161 DNKRQVQCISFIAYKP 176
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 113 ASPGYYDGRYWTMWKLPMFGCTD 135
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE++ P
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASP 115
>RBS1_LEMGI (P00872) Ribulose bisphosphate carboxylase small chain SSU1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU1)
Length = 173
Score = 91.7 bits (226), Expect = 2e-18
Identities = 55/136 (40%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
S+GGR+ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 46 SSGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVY 104
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ YP+ +VRIIGF
Sbjct: 105 RENNASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGF 156
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQC+SFIA++P
Sbjct: 157 DNKRQVQCISFIAYKP 172
Score = 48.5 bits (114), Expect(2) = 5e-14
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 109 ASPGYYDGRYWTMWKLPMFGCTD 131
Score = 48.5 bits (114), Expect(2) = 5e-14
Identities = 19/29 (65%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE+N P
Sbjct: 83 VDYLLRNDWVPCIEFSKEGFVYRENNASP 111
>RBS3_LEMGI (P19309) Ribulose bisphosphate carboxylase small chain SSU40A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU40A)
Length = 177
Score = 91.3 bits (225), Expect = 2e-18
Identities = 55/135 (40%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Frame = -1
Query: 627 NGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXXX 448
NGGR+ CMQVWP EG+KKFETLSYLPPL+ E + +
Sbjct: 51 NGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAKE-VDYLLRNDWVPCIEFSKEGFVYR 109
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
SPGYYD Y M + P V+ YP+ +VRIIGFD
Sbjct: 110 ENHASPGYYD--------GRYWTMWKLPMFGCTDASQVIAEVEEAKKAYPEYFVRIIGFD 161
Query: 288 NLRQVQCVSFIAFRP 244
N RQVQC+SFIA++P
Sbjct: 162 NKRQVQCISFIAYKP 176
Score = 48.5 bits (114), Expect(2) = 2e-13
Identities = 19/23 (82%), Positives = 19/23 (82%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A PG GRYWTMWKLPMFGCTD
Sbjct: 113 ASPGYYDGRYWTMWKLPMFGCTD 135
Score = 46.6 bits (109), Expect(2) = 2e-13
Identities = 18/29 (62%), Positives = 24/29 (82%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
VDY +R+ WVPC+EFSK GFV+RE++ P
Sbjct: 87 VDYLLRNDWVPCIEFSKEGFVYRENHASP 115
>RBS_TRIRP (P17673) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 90.9 bits (224), Expect = 3e-18
Identities = 57/137 (41%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNG R+ CMQVWP G KKFETLSYLPPLT E +
Sbjct: 48 SNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQLLKEVEYLLRKGWVPCVEFELEKGFVH 107
Query: 450 XSTTGSPGYYD--------XPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ +AA VL EYP+A++RIIG
Sbjct: 108 RQYNSSPGYYDGRYWTMWRLPLFGTTDAA---------QVLKEVAECKAEYPEAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN+RQVQC+SFIA P
Sbjct: 159 FDNVRQVQCISFIASTP 175
Score = 35.8 bits (81), Expect = 0.11
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R WVPC+EF + GFV R++N P
Sbjct: 85 VEYLLRKGWVPCVEFELEKGFVHRQYNSSP 114
>RBS2_PETHY (P04715) Ribulose bisphosphate carboxylase small chain SSU11A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU11A)
Length = 180
Score = 90.9 bits (224), Expect = 3e-18
Identities = 56/138 (40%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KK+ETLSYLP LT E +
Sbjct: 50 SNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SP YYD Y M + P VL YP+A++RIIGF
Sbjct: 110 REYHASPRYYD--------GRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++PPG
Sbjct: 162 DNVRQVQCISFIAYKPPG 179
Score = 45.4 bits (106), Expect(2) = 8e-10
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A P GRYWTMWKLPMFGCTD
Sbjct: 114 ASPRYYDGRYWTMWKLPMFGCTD 136
Score = 37.4 bits (85), Expect(2) = 8e-10
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLPR 428
++Y + WVPCLEF ++ GFV+RE++ PR
Sbjct: 87 IEYLLNKGWVPCLEFETEHGFVYREYHASPR 117
>RBS1_PETHY (P04714) Ribulose bisphosphate carboxylase small chain SSU8,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit SSU8)
Length = 180
Score = 90.9 bits (224), Expect = 3e-18
Identities = 56/138 (40%), Positives = 68/138 (49%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KK+ETLSYLP LT E +
Sbjct: 50 SNGGRVQCMQVWPPYGKKKYETLSYLPDLTDEQLLKEIEYLLNKGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SP YYD Y M + P VL YP+A++RIIGF
Sbjct: 110 REYHASPRYYD--------GRYWTMWKLPMFGCTDATQVLGELQEAKKAYPNAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++PPG
Sbjct: 162 DNVRQVQCISFIAYKPPG 179
Score = 45.4 bits (106), Expect(2) = 8e-10
Identities = 18/23 (78%), Positives = 18/23 (78%)
Frame = -2
Query: 437 APPGTTTGRYWTMWKLPMFGCTD 369
A P GRYWTMWKLPMFGCTD
Sbjct: 114 ASPRYYDGRYWTMWKLPMFGCTD 136
Score = 37.4 bits (85), Expect(2) = 8e-10
Identities = 15/31 (48%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLPR 428
++Y + WVPCLEF ++ GFV+RE++ PR
Sbjct: 87 IEYLLNKGWVPCLEFETEHGFVYREYHASPR 117
>RBS_LACSA (Q40250) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 90.5 bits (223), Expect = 4e-18
Identities = 54/138 (39%), Positives = 70/138 (50%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G+KK+ETLSYLPPL+ E +
Sbjct: 50 SNGGRVQCMKVWPPIGLKKYETLSYLPPLSDEALSKEIDYLIRNKWIPCLEFELEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP+A++R+IGF
Sbjct: 110 REHHHSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKEVGECKKEYPNAFIRVIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFI +PPG
Sbjct: 162 DNIRQVQCISFIVAKPPG 179
Score = 44.7 bits (104), Expect = 2e-04
Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
+DY IR+KW+PCLEF + GFV+REH+ P
Sbjct: 87 IDYLIRNKWIPCLEFELEHGFVYREHHHSP 116
>RBS1_MESCR (P16032) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 182
Score = 90.5 bits (223), Expect = 4e-18
Identities = 53/136 (38%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
+NGGR++CMQVWP G KKFETLSYLPPL+ E +
Sbjct: 50 TNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A++RIIGF
Sbjct: 110 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA++P
Sbjct: 162 DNVRQVQCISFIAYKP 177
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 87 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 116
>RBS6_MESCR (Q08186) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6)
Length = 186
Score = 90.5 bits (223), Expect = 4e-18
Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGG+++CMQVWP G KKFETLSYLPPL+ E +
Sbjct: 54 SNGGKVQCMQVWPPLGKKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVY 113
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A++RIIGF
Sbjct: 114 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGF 165
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQCVSFIA++P
Sbjct: 166 DNVRQVQCVSFIAYKP 181
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 91 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 120
>RBS_GLYTA (Q42823) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 90.5 bits (223), Expect = 4e-18
Identities = 55/137 (40%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLP L +
Sbjct: 48 SNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP+A++RIIGF
Sbjct: 108 REHHRSPGYYD--------GRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNAFIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPP 241
DN+RQVQC+SFIA++PP
Sbjct: 160 DNVRQVQCISFIAYKPP 176
Score = 41.6 bits (96), Expect = 0.002
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R W+PCLEF + GFV+REH+R P
Sbjct: 85 VEYLLRKGWIPCLEFELEHGFVYREHHRSP 114
>RBS3_PEA (P07689) Ribulose bisphosphate carboxylase small chain 3A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3A)
Length = 180
Score = 90.5 bits (223), Expect = 4e-18
Identities = 56/137 (40%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPLT + +
Sbjct: 50 SNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVY 109
Query: 450 XSTTGSPGYYD--------XPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ +A+ VL YP A+VRIIG
Sbjct: 110 REHNKSPGYYDGRYWTMWKLPMFGTTDAS---------QVLKELDEVVAAYPQAFVRIIG 160
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN+RQVQC+SFIA P
Sbjct: 161 FDNVRQVQCISFIAHTP 177
Score = 43.1 bits (100), Expect = 7e-04
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R WVPCLEF + GFV+REHN+ P
Sbjct: 87 VEYLLRKGWVPCLEFELEKGFVYREHNKSP 116
>RBS2_PEA (P00869) Ribulose bisphosphate carboxylase small chain 3C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3C) (PSS15)
Length = 180
Score = 90.5 bits (223), Expect = 4e-18
Identities = 56/137 (40%), Positives = 66/137 (48%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPLT + +
Sbjct: 50 SNGGRVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELEKGFVY 109
Query: 450 XSTTGSPGYYD--------XPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ +A+ VL YP A+VRIIG
Sbjct: 110 REHNKSPGYYDGRYWTMWKLPMFGTTDAS---------QVLKELDEVVAAYPQAFVRIIG 160
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN+RQVQC+SFIA P
Sbjct: 161 FDNVRQVQCISFIAHTP 177
Score = 43.1 bits (100), Expect = 7e-04
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R WVPCLEF + GFV+REHN+ P
Sbjct: 87 VEYLLRKGWVPCLEFELEKGFVYREHNKSP 116
>RBS2_MESCR (Q04450) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 180
Score = 90.5 bits (223), Expect = 4e-18
Identities = 54/136 (39%), Positives = 67/136 (49%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPL+ E +
Sbjct: 48 SNGGRVQCMQVWPPLGKKKFETLSYLPPLSEESLMKEVQYLLNNGWVPCLEFEPTHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A+ RIIGF
Sbjct: 108 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFTRIIGF 159
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA++P
Sbjct: 160 DNVRQVQCISFIAYKP 175
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 85 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 114
>RBS_STELP (Q41351) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 90.1 bits (222), Expect = 5e-18
Identities = 54/137 (39%), Positives = 67/137 (48%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L++E
Sbjct: 50 SNGGRVRCMQVWPPINMKKYETLSYLPDLSSEQLLSEIEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
T SPGYYD P+ +A V YPDA++RIIG
Sbjct: 110 REHTSSPGYYDGRYWTMWKLPMFGCTDATQVAAE---------VQEAKKAYPDAHIRIIG 160
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN+RQVQC+SFIA++P
Sbjct: 161 FDNVRQVQCISFIAYKP 177
Score = 40.0 bits (92), Expect = 0.006
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y +++ WVPCLEF ++ GFV+REH P
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYREHTSSP 116
>RBS_FAGCR (O22077) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 90.1 bits (222), Expect = 5e-18
Identities = 54/137 (39%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G++KFETLSYLPPL+ E +
Sbjct: 52 SNGGRVQCMKVWPPLGLQKFETLSYLPPLSIESLAKQIEYLILKGWIPCLEFELEHPFVY 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP +++RIIGF
Sbjct: 112 RENNRSPGYYD--------GRYWVMWKLPMFGCTDATQVLAELQEASKTYPTSHIRIIGF 163
Query: 291 DNLRQVQCVSFIAFRPP 241
DN RQVQC+SFIA++PP
Sbjct: 164 DNKRQVQCISFIAYKPP 180
Score = 35.8 bits (81), Expect = 0.11
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
+++Y I W+PCLEF + FV+RE+NR P
Sbjct: 88 QIEYLILKGWIPCLEFELEHPFVYRENNRSP 118
>RBS1_LYCES (P08706) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1) (LESS17)
Length = 181
Score = 90.1 bits (222), Expect = 5e-18
Identities = 56/138 (40%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E
Sbjct: 51 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETERGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A+VRIIGF
Sbjct: 111 RENNSSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGF 162
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 163 DNVRQVQCISFIAYKPEG 180
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/32 (50%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y +++ WVPCLEF ++ GFV+RE+N P
Sbjct: 86 SEIEYLLKNGWVPCLEFETERGFVYRENNSSP 117
>RBS1_AMAHP (Q42516) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 183
Score = 89.7 bits (221), Expect = 6e-18
Identities = 57/138 (41%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPL+
Sbjct: 52 SNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVY 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
SPGY D Y M + P VLN YP A++RIIGF
Sbjct: 112 RENHRSPGYQD--------GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPSAFIRIIGF 163
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN RQVQCVSFIA++P G
Sbjct: 164 DNKRQVQCVSFIAYKPAG 181
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 431 PGTTTGRYWTMWKLPMFGCTD 369
PG GRYWTMWKLPM+GCTD
Sbjct: 118 PGYQDGRYWTMWKLPMYGCTD 138
Score = 33.1 bits (74), Expect(2) = 6e-09
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
++V Y + W+PC+EF + FV+RE++R P
Sbjct: 87 AQVQYLLNKGWIPCIEFELEHPFVYRENHRSP 118
>RBS_GLYTO (Q42822) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 89.7 bits (221), Expect = 6e-18
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLP L +
Sbjct: 48 SNGGRVQCMQVWPTTGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ +A+ V L YP+ ++RIIG
Sbjct: 108 RENHRSPGYYDGRYWTMWKLPVFGCTDASQV---------LKELQEAKTAYPNGFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPP 241
FDN+RQVQC+SFIA++PP
Sbjct: 159 FDNVRQVQCISFIAYKPP 176
Score = 38.9 bits (89), Expect = 0.013
Identities = 16/30 (53%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R W+PCLEF + GFV+RE++R P
Sbjct: 85 VEYLLRKGWIPCLEFELEHGFVYRENHRSP 114
>RBSC_SOLTU (P26577) Ribulose bisphosphate carboxylase small chain 2C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2C)
Length = 180
Score = 89.7 bits (221), Expect = 6e-18
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E +
Sbjct: 50 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/30 (53%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 87 VEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBSB_SOLTU (P26576) Ribulose bisphosphate carboxylase small chain 2B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2B)
Length = 180
Score = 89.7 bits (221), Expect = 6e-18
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E +
Sbjct: 50 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/30 (53%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 87 VEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBSA_SOLTU (P26575) Ribulose bisphosphate carboxylase small chain 2A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2A)
Length = 180
Score = 89.7 bits (221), Expect = 6e-18
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E +
Sbjct: 50 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/30 (53%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 87 VEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBS1_SOLTU (P26574) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 181
Score = 89.7 bits (221), Expect = 6e-18
Identities = 56/138 (40%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP LT E +
Sbjct: 51 SNGGRVRCMQVWPPINMKKYETLSYLPDLTDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 111 RENHKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQECKKSYPQAWIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 163 DNVRQVQCISFIAYKPEG 180
Score = 37.7 bits (86), Expect = 0.029
Identities = 15/30 (50%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+++ P
Sbjct: 88 VEYLLKNGWVPCLEFETEHGFVYRENHKSP 117
>RBS0_SOLTU (P10647) Ribulose bisphosphate carboxylase small chain C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit C)
Length = 181
Score = 89.7 bits (221), Expect = 6e-18
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E +
Sbjct: 51 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 111 REHNSSPGYYD--------GRYWTMWKLPMFGCTDGTQVLAEVQEAKNAYPQAWIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 163 DNVRQVQCISFIAYKPEG 180
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/30 (56%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+REHN P
Sbjct: 88 VEYLLKNGWVPCLEFETEHGFVYREHNSSP 117
>RBS3_SOLTU (P32764) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 181
Score = 89.0 bits (219), Expect = 1e-17
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+RCMQVWP +KK+ETLSYLP L+ E +
Sbjct: 51 SNGGRVRCMQVWPPINMKKYETLSYLPDLSDEQLLKEVEYLLKNGWVPCLEFETEHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 111 RENHKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 163 DNVRQVQCISFIAYKPEG 180
Score = 37.7 bits (86), Expect = 0.029
Identities = 15/30 (50%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+++ P
Sbjct: 88 VEYLLKNGWVPCLEFETEHGFVYRENHKSP 117
>RBS1A_ARATH (P10795) Ribulose bisphosphate carboxylase small chain 1A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1A)
Length = 180
Score = 89.0 bits (219), Expect = 1e-17
Identities = 56/138 (40%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP G KKFETLSYLP LT +
Sbjct: 48 SNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ ++A V L EYP+A++RIIG
Sbjct: 108 REHGNSPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVEECKKEYPNAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPP 241
FDN RQVQC+SFIA++PP
Sbjct: 159 FDNTRQVQCISFIAYKPP 176
Score = 43.5 bits (101), Expect = 5e-04
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY IR+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLIRNKWIPCVEFELEHGFVYREHGNSP 114
>RBS_HELAN (P08705) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 178
Score = 88.2 bits (217), Expect = 2e-17
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G+KK+ETLSYLPPLT +
Sbjct: 48 SNGGRVQCMKVWPPLGLKKYETLSYLPPLTETQLAKEVDYLLRKKWVPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 108 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELAECKKEYPQAWIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+ FIA RP G
Sbjct: 160 DNVRQVQCIMFIASRPDG 177
Score = 42.4 bits (98), Expect = 0.001
Identities = 19/30 (63%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R KWVPCLEF + GFV+RE+ R P
Sbjct: 85 VDYLLRKKWVPCLEFELEHGFVYRENARSP 114
>RBS1_SOYBN (P00865) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 178
Score = 87.8 bits (216), Expect = 2e-17
Identities = 54/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLP L +
Sbjct: 48 SNGGRVQCMQVWPPIGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SP YYD Y M + P VL YP+ ++RIIGF
Sbjct: 108 REHNRSPXYYD--------GRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++PPG
Sbjct: 160 DNVRQVQCISFIAYKPPG 177
Score = 43.5 bits (101), Expect = 5e-04
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
V+Y +R W+PCLEF + GFV+REHNR P
Sbjct: 85 VEYLLRKGWIPCLEFELEHGFVYREHNRSP 114
>RBS2_AMAHP (Q9XGX5) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 184
Score = 87.4 bits (215), Expect = 3e-17
Identities = 56/136 (41%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLPPL+
Sbjct: 53 SNGGRVQCMQVWPPVGKKKFETLSYLPPLSDAQLLAQVQYLLNKGWIPCIEFELEHPFVY 112
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
SPGY D Y M + P VLN YP A++RIIGF
Sbjct: 113 RENHRSPGYQD--------GRYWTMWKLPMYGCTDPAQVLNEVEEAKKAYPTAFIRIIGF 164
Query: 291 DNLRQVQCVSFIAFRP 244
DN RQVQCVSFIA++P
Sbjct: 165 DNKRQVQCVSFIAYKP 180
Score = 46.6 bits (109), Expect(2) = 6e-09
Identities = 17/21 (80%), Positives = 18/21 (85%)
Frame = -2
Query: 431 PGTTTGRYWTMWKLPMFGCTD 369
PG GRYWTMWKLPM+GCTD
Sbjct: 119 PGYQDGRYWTMWKLPMYGCTD 139
Score = 33.1 bits (74), Expect(2) = 6e-09
Identities = 13/32 (40%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
++V Y + W+PC+EF + FV+RE++R P
Sbjct: 88 AQVQYLLNKGWIPCIEFELEHPFVYRENHRSP 119
>RBS2A_LYCES (P07179) Ribulose bisphosphate carboxylase small chain 2A,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2A) (LESS 5)
Length = 180
Score = 87.0 bits (214), Expect = 4e-17
Identities = 55/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP +KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A+VRIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 40.8 bits (94), Expect = 0.003
Identities = 16/32 (50%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBS5_MESCR (Q08185) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 182
Score = 86.7 bits (213), Expect = 5e-17
Identities = 54/136 (39%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM VWP G+KKFETLSYLPPL+ E +
Sbjct: 51 SNGGRVQCM-VWPPLGMKKFETLSYLPPLSEESLLKEVQYLLNNGWVPCLEFEPTHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
+PGYYD Y M + P V+ YP+A++RIIGF
Sbjct: 110 REHGNTPGYYD--------GRYWTMWKLPMFGCTDPSQVVAELEEAKKAYPEAFIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQCVSFIA++P
Sbjct: 162 DNVRQVQCVSFIAYKP 177
Score = 38.1 bits (87), Expect = 0.022
Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLP 431
V Y + + WVPCLEF GFV+REH P
Sbjct: 87 VQYLLNNGWVPCLEFEPTHGFVYREHGNTP 116
>RBS_SILPR (P18960) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 177
Score = 86.7 bits (213), Expect = 5e-17
Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
+NGGR+ CMQVWP +KKFETLSYLP L+ E +
Sbjct: 49 TNGGRVNCMQVWPPRNLKKFETLSYLPTLSEESLLKEINYLLIKGWVPCLEFEVGPAHVY 108
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
SPGYYD P+ +A+ V YPDA+VRIIG
Sbjct: 109 RENNKSPGYYDGRYWTMWKLPMFGCTDASQVAAE---------VVECKNAYPDAHVRIIG 159
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN RQVQC+SFIA++P
Sbjct: 160 FDNKRQVQCISFIAYKP 176
Score = 31.2 bits (69), Expect = 2.7
Identities = 15/31 (48%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKVG--FVFREHNRLP 431
++Y + WVPCLEF +VG V+RE+N+ P
Sbjct: 86 INYLLIKGWVPCLEF-EVGPAHVYRENNKSP 115
>RBS2_NICSY (P22433) Ribulose bisphosphate carboxylase small chain S41,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit S41)
Length = 181
Score = 86.3 bits (212), Expect = 7e-17
Identities = 54/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP KK+ETLSYLP L+ E
Sbjct: 51 SNGGRVQCMQVWPPINKKKYETLSYLPDLSEEQLLREVEYLLKNGWVPCLEFETEHGFVY 110
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 111 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 162
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 163 DNVRQVQCISFIAYKPEG 180
Score = 39.7 bits (91), Expect = 0.008
Identities = 16/30 (53%), Positives = 25/30 (83%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 88 VEYLLKNGWVPCLEFETEHGFVYRENNKSP 117
>RBS1_BRANA (P05346) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 86.3 bits (212), Expect = 7e-17
Identities = 55/139 (39%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = -1
Query: 633 VSNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXX 454
VSNGGR+ CM+VWP G KKFETLSYLP LT +
Sbjct: 47 VSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFV 106
Query: 453 XXSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRII 298
+PGYYD P+ ++A V L EYP+A++RII
Sbjct: 107 YREHGSTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVQECKTEYPNAFIRII 157
Query: 297 GFDNLRQVQCVSFIAFRPP 241
GFDN RQVQC+SFIA++PP
Sbjct: 158 GFDNNRQVQCISFIAYKPP 176
Score = 42.7 bits (99), Expect = 9e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGSTP 114
>RBS_TOBAC (P69249) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
(TSSU3-8)
Length = 180
Score = 86.3 bits (212), Expect = 7e-17
Identities = 54/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 85 SEVEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBS3B_LYCES (P05349) Ribulose bisphosphate carboxylase small chain 3B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3B)
Length = 180
Score = 86.3 bits (212), Expect = 7e-17
Identities = 55/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP +KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A+VRIIGF
Sbjct: 110 RENHKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 38.9 bits (89), Expect = 0.013
Identities = 15/32 (46%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y +++ WVPCLEF ++ GFV+RE+++ P
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYRENHKSP 116
>RBS3A_LYCES (P07180) Ribulose bisphosphate carboxylase small chain 3A/3C,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3A/3C)
Length = 180
Score = 86.3 bits (212), Expect = 7e-17
Identities = 55/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CMQVWP +KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVSCMQVWPPINMKKYETLSYLPDLSDEQLLSEIEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A+VRIIGF
Sbjct: 110 RENHKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVQEAKKAYPQAWVRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 38.9 bits (89), Expect = 0.013
Identities = 15/32 (46%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y +++ WVPCLEF ++ GFV+RE+++ P
Sbjct: 85 SEIEYLLKNGWVPCLEFETEHGFVYRENHKSP 116
>RBS1_NICSY (P69250) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 86.3 bits (212), Expect = 7e-17
Identities = 54/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEVEYLLKNGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A++RIIGF
Sbjct: 110 RENNKSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 41.2 bits (95), Expect = 0.003
Identities = 17/32 (53%), Positives = 26/32 (81%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S V+Y +++ WVPCLEF ++ GFV+RE+N+ P
Sbjct: 85 SEVEYLLKNGWVPCLEFETEHGFVYRENNKSP 116
>RBS_FLATR (P07089) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 173
Score = 85.1 bits (209), Expect = 2e-16
Identities = 55/138 (39%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G KK+ETLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPVGKKKYETLSYLPELTEAQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENASSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQCVSFIA +P G
Sbjct: 155 DNVRQVQCVSFIASKPTG 172
Score = 40.4 bits (93), Expect = 0.004
Identities = 18/30 (60%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENASSP 109
>RBS8_NICPL (P26573) Ribulose bisphosphate carboxylase small chain 8B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 8B)
Length = 180
Score = 85.1 bits (209), Expect = 2e-16
Identities = 55/138 (39%), Positives = 65/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP KK+ETLSYLP L+ E
Sbjct: 50 SNGGRVQCMQVWPPINKKKYETLSYLPDLSQEQLLSEIEYLLKSGWVPCLEFETERGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VL YP A+VRIIGF
Sbjct: 110 REHHHSPGYYD--------GRYWTMWKLPMFGCTDATQVLAEVEEAKKAYPQAWVRIIGF 161
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 162 DNVRQVQCISFIAYKPEG 179
Score = 42.0 bits (97), Expect = 0.002
Identities = 17/32 (53%), Positives = 25/32 (78%), Gaps = 1/32 (3%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
S ++Y ++S WVPCLEF ++ GFV+REH+ P
Sbjct: 85 SEIEYLLKSGWVPCLEFETERGFVYREHHHSP 116
>RBS4_SOYBN (P12468) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 178
Score = 84.7 bits (208), Expect = 2e-16
Identities = 53/137 (38%), Positives = 64/137 (46%), Gaps = 7/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLP L +
Sbjct: 48 SNGGRVQCMQVWPPVGKKKFETLSYLPDLDDAQLAKEVEYLLRKGWIPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
S GYYD Y M + P VL YP+ ++RIIGF
Sbjct: 108 REHNRSLGYYD--------GRYWTMWKLPMFGCTDASQVLKELQEAKTAYPNGFIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPP 241
DN+RQVQC+SFIA++PP
Sbjct: 160 DNVRQVQCISFIAYKPP 176
Score = 44.7 bits (104), Expect(2) = 7e-11
Identities = 17/20 (85%), Positives = 17/20 (85%)
Frame = -2
Query: 428 GTTTGRYWTMWKLPMFGCTD 369
G GRYWTMWKLPMFGCTD
Sbjct: 115 GYYDGRYWTMWKLPMFGCTD 134
Score = 41.6 bits (96), Expect(2) = 7e-11
Identities = 17/28 (60%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNR 437
V+Y +R W+PCLEF + GFV+REHNR
Sbjct: 85 VEYLLRKGWIPCLEFELEHGFVYREHNR 112
>RBS2_BRANA (P27985) Ribulose bisphosphate carboxylase small chain F1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit F1)
Length = 181
Score = 84.7 bits (208), Expect = 2e-16
Identities = 54/138 (39%), Positives = 67/138 (48%), Gaps = 8/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM+VWP G KKFETLSYLP LT +
Sbjct: 48 SNGGRVSCMKVWPPVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
+PGYYD P+ ++A V L EYP+A++RIIG
Sbjct: 108 REHGSTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVQECKTEYPNAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPP 241
FDN RQVQC+SFIA++PP
Sbjct: 159 FDNNRQVQCISFIAYKPP 176
Score = 42.7 bits (99), Expect = 9e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGSTP 114
>RBS_GOSHI (P31333) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 182
Score = 84.7 bits (208), Expect = 2e-16
Identities = 55/138 (39%), Positives = 67/138 (48%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CMQVWP G KKFETLSYLP LT +
Sbjct: 52 SNGGRVQCMQVWPPLGKKKFETLSYLPDLTPVQLAKEVDYLLRSKWIPCLEFELEEGFVH 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
+ P YYD Y M + P VL EYP+A++RIIGF
Sbjct: 112 RKYSSLPTYYD--------GRYWTMWKLPMFGCTDSAQVLEELENCKKEYPNAFIRIIGF 163
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA++P G
Sbjct: 164 DNVRQVQCISFIAYKPKG 181
Score = 44.3 bits (103), Expect(2) = 6e-11
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 416 GRYWTMWKLPMFGCTD 369
GRYWTMWKLPMFGCTD
Sbjct: 123 GRYWTMWKLPMFGCTD 138
Score = 42.4 bits (98), Expect(2) = 6e-11
Identities = 18/30 (60%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +RSKW+PCLEF + GFV R+++ LP
Sbjct: 89 VDYLLRSKWIPCLEFELEEGFVHRKYSSLP 118
>RBS1B_ARATH (P10796) Ribulose bisphosphate carboxylase small chain 1B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1B)
Length = 181
Score = 84.3 bits (207), Expect = 3e-16
Identities = 54/138 (39%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM+VWP G KKFETLSYLP LT +
Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
+PGYYD P+ ++A V L EYP A++RIIG
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVEECKKEYPGAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPP 241
FDN RQVQC+SFIA++PP
Sbjct: 159 FDNTRQVQCISFIAYKPP 176
Score = 43.1 bits (100), Expect = 7e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGNTP 114
>RBS3B_ARATH (P10798) Ribulose bisphosphate carboxylase small chain 3B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3B)
Length = 181
Score = 84.0 bits (206), Expect = 3e-16
Identities = 54/143 (37%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM+VWP G KKFETLSYLP L+ +
Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
+PGYYD P+ ++A V L EYP A++RIIG
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVEECKKEYPGAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPPGCEES 226
FDN RQVQC+SFIA++PP E+
Sbjct: 159 FDNTRQVQCISFIAYKPPSFTEA 181
Score = 43.1 bits (100), Expect = 7e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGNTP 114
>RBS2B_ARATH (P10797) Ribulose bisphosphate carboxylase small chain 2B,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2B)
Length = 181
Score = 84.0 bits (206), Expect = 3e-16
Identities = 54/143 (37%), Positives = 68/143 (47%), Gaps = 8/143 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM+VWP G KKFETLSYLP L+ +
Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
+PGYYD P+ ++A V L EYP A++RIIG
Sbjct: 108 REHGNTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVEECKKEYPGAFIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPPGCEES 226
FDN RQVQC+SFIA++PP E+
Sbjct: 159 FDNTRQVQCISFIAYKPPSFTEA 181
Score = 43.1 bits (100), Expect = 7e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGNTP 114
>RBS_CUCSA (P08474) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 189
Score = 84.0 bits (206), Expect = 3e-16
Identities = 49/136 (36%), Positives = 68/136 (50%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SN G+++CM+VWP G++KFETLSYLP ++ E +
Sbjct: 52 SNAGKVQCMKVWPPLGLRKFETLSYLPDMSNEQLSKECDYLLRNGWVPCVEFDIGSGFVY 111
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGF 292
SPG+YD Y M + P V+ EYPDA++R+IGF
Sbjct: 112 RENHRSPGFYD--------GRYWTMWKLPMFGCTDSSQVIQEIEEAKKEYPDAFIRVIGF 163
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA++P
Sbjct: 164 DNVRQVQCISFIAYKP 179
Score = 37.7 bits (86), Expect = 0.029
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = -3
Query: 514 DYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
DY +R+ WVPC+EF GFV+RE++R P
Sbjct: 90 DYLLRNGWVPCVEFDIGSGFVYRENHRSP 118
>RBS4_FLAPR (Q39746) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 178
Score = 83.2 bits (204), Expect = 6e-16
Identities = 54/138 (39%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G KK+ETLSYLP LT +
Sbjct: 48 SNGGRVQCMKVWPPLGKKKYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 108 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 160 DNVRQVQCISFIASKPDG 177
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 85 VDYLLRNKWVPCLEFELEHGFVYRENARSP 114
>RBS1_FLAPR (Q39743) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 173
Score = 82.8 bits (203), Expect = 8e-16
Identities = 54/138 (39%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G KK+ETLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPLGKKKYETLSYLPDLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 155 DNVRQVQCISFIASKPGG 172
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENARSP 109
>RBS_CAPAN (O65349) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 187
Score = 82.8 bits (203), Expect = 8e-16
Identities = 53/136 (38%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM VWP KK+ETLSYLP L+ E +
Sbjct: 50 SNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLLKEIEYLLQKGWVPCLEFETEHGFVY 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P VLN YP A++RIIGF
Sbjct: 110 REHHRSPGYYD--------GRYWTMWKLPMFGCTDATQVLNEVQEAKKAYPQAWIRIIGF 161
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA++P
Sbjct: 162 DNVRQVQCISFIAYKP 177
Score = 40.4 bits (93), Expect = 0.004
Identities = 16/30 (53%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEF-SKVGFVFREHNRLP 431
++Y ++ WVPCLEF ++ GFV+REH+R P
Sbjct: 87 IEYLLQKGWVPCLEFETEHGFVYREHHRSP 116
>RBS3_FLAPR (Q39745) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 173
Score = 82.4 bits (202), Expect = 1e-15
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G K++ETLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPLGKKRYETLSYLPNLTESQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 155 DNVRQVQCISFIASKPDG 172
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENARSP 109
>RBS2_FLAPR (Q39744) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 178
Score = 82.0 bits (201), Expect = 1e-15
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G K++ETLSYLP LT +
Sbjct: 48 SNGGRVQCMKVWPPLGKKRYETLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVY 107
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 108 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 159
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 160 DNVRQVQCISFIASKPEG 177
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 85 VDYLLRNKWVPCLEFELEHGFVYRENARSP 114
>RBS1_PEA (P00868) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit) (PSSU1)
(Fragment)
Length = 136
Score = 81.6 bits (200), Expect = 2e-15
Identities = 52/136 (38%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNG R++CMQVWP G KKFETLSYLPPLT + +
Sbjct: 6 SNGERVKCMQVWPPIGKKKFETLSYLPPLTRDQLLKEVEYLLRKGWVPCLEFELLKGFVY 65
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHR-------PPHXVLNXXXXXXXEYPDAYVRIIGF 292
SP YYD Y M + P V+ YP+A+VR+IGF
Sbjct: 66 GEHNKSPRYYD--------GRYWTMWKLPMFGTTDPAQVVKEVDEVVAAYPEAFVRVIGF 117
Query: 291 DNLRQVQCVSFIAFRP 244
+N+RQVQC+SFIA P
Sbjct: 118 NNVRQVQCISFIAHTP 133
Score = 42.4 bits (98), Expect(2) = 8e-10
Identities = 18/31 (58%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFSKV-GFVFREHNRLPR 428
V+Y +R WVPCLEF + GFV+ EHN+ PR
Sbjct: 43 VEYLLRKGWVPCLEFELLKGFVYGEHNKSPR 73
Score = 40.4 bits (93), Expect(2) = 8e-10
Identities = 15/16 (93%), Positives = 15/16 (93%)
Frame = -2
Query: 416 GRYWTMWKLPMFGCTD 369
GRYWTMWKLPMFG TD
Sbjct: 77 GRYWTMWKLPMFGTTD 92
>RBS7_FLAPR (Q39749) Ribulose bisphosphate carboxylase small chain 7,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 7)
Length = 173
Score = 81.6 bits (200), Expect = 2e-15
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G K++ETLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 155 DNVRQVQCISFIASKPDG 172
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENARSP 109
>RBS5_FLAPR (Q39747) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 173
Score = 81.6 bits (200), Expect = 2e-15
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 7/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G K++ETLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPLGKKRYETLSYLPNLTEVQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENARSPGYYD--------GRYWTMWKLPMFGCTDSAQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRPPG 238
DN+RQVQC+SFIA +P G
Sbjct: 155 DNVRQVQCISFIASKPDG 172
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENARSP 109
>RBS_RAPSA (P08135) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 181
Score = 81.3 bits (199), Expect = 2e-15
Identities = 53/138 (38%), Positives = 66/138 (47%), Gaps = 8/138 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR+ CM+VWP G KKFETLSYLP L+ +
Sbjct: 48 SNGGRVSCMKVWPPIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVY 107
Query: 450 XSTTGSPGYYDX--------PILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIG 295
+PGYYD P+ ++A V L EYP+A +RIIG
Sbjct: 108 REHGSTPGYYDGRYWTMWKLPLFGCTDSAQV---------LKEVQECKKEYPNALIRIIG 158
Query: 294 FDNLRQVQCVSFIAFRPP 241
FDN RQVQC+SFIA++PP
Sbjct: 159 FDNNRQVQCISFIAYKPP 176
Score = 42.7 bits (99), Expect = 9e-04
Identities = 17/30 (56%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KW+PC+EF + GFV+REH P
Sbjct: 85 VDYLLRNKWIPCVEFELEHGFVYREHGSTP 114
>RBS6_FLAPR (Q39748) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6)
Length = 173
Score = 79.0 bits (193), Expect = 1e-14
Identities = 52/136 (38%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
SNGGR++CM+VWP G KK+ TLSYLP LT +
Sbjct: 43 SNGGRVQCMKVWPPLGKKKYXTLSYLPNLTEAQLAKEVDYLLRNKWVPCLEFELEHGFVY 102
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPPHX-------VLNXXXXXXXEYPDAYVRIIGF 292
SPGYYD Y M + P V+ EYP A++RIIGF
Sbjct: 103 RENARSPGYYD--------GRYWTMWKLPMFGCTDSVQVMKELQECKKEYPQAWIRIIGF 154
Query: 291 DNLRQVQCVSFIAFRP 244
DN+RQVQC+SFIA +P
Sbjct: 155 DNVRQVQCISFIASKP 170
Score = 42.7 bits (99), Expect = 9e-04
Identities = 19/30 (63%), Positives = 24/30 (80%), Gaps = 1/30 (3%)
Frame = -3
Query: 517 VDYXIRSKWVPCLEFS-KVGFVFREHNRLP 431
VDY +R+KWVPCLEF + GFV+RE+ R P
Sbjct: 80 VDYLLRNKWVPCLEFELEHGFVYRENARSP 109
>RBS_SACHY (Q41373) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 168
Score = 77.0 bits (188), Expect = 4e-14
Identities = 54/141 (38%), Positives = 65/141 (46%), Gaps = 7/141 (4%)
Frame = -1
Query: 633 VSNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXX 454
VSNGGRIRCMQVWP G KKFETLSYLPPLT E + +
Sbjct: 38 VSNGGRIRCMQVWPAYGNKKFETLSYLPPLTQEQLLKQ-VDYLLRNNWVPCLEFSKEGFV 96
Query: 453 XXSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIG 295
+ SP YYD Y M + P V YP+ I+G
Sbjct: 97 YRENSTSPCYYD--------GRYWTMWKLPMFGCTDASQVYKELQEAIASYPELRA-ILG 147
Query: 294 FDNLRQVQCVSFIAFRPPGCE 232
FDN+RQ Q ++FIA++P G E
Sbjct: 148 FDNIRQTQWLTFIAYKPAGSE 168
Score = 48.1 bits (113), Expect(2) = 1e-12
Identities = 19/30 (63%), Positives = 25/30 (83%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
+VDY +R+ WVPCLEFSK GFV+RE++ P
Sbjct: 75 QVDYLLRNNWVPCLEFSKEGFVYRENSTSP 104
Score = 44.3 bits (103), Expect(2) = 1e-12
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = -2
Query: 416 GRYWTMWKLPMFGCTD 369
GRYWTMWKLPMFGCTD
Sbjct: 109 GRYWTMWKLPMFGCTD 124
>RBS_MARPA (O64416) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 180
Score = 61.2 bits (147), Expect = 2e-09
Identities = 45/137 (32%), Positives = 56/137 (40%), Gaps = 8/137 (5%)
Frame = -1
Query: 630 SNGGRIRCMQVWPIEGIKKFETLSYLPPLTTEGPPEAGLTTXXXXXXXXXXXXXXXXXXX 451
+NG R+ CMQVW KFETLSYLPPL+ + + +
Sbjct: 51 TNGSRVSCMQVWEPYNNLKFETLSYLPPLSQDALAKQ-IDYVIKSGWAPCIEFDVQGTVT 109
Query: 450 XSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEY-PDAYVRIIG 295
+ PGYYD Y M + P VL Y Y+R +G
Sbjct: 110 REGSTMPGYYD--------GRYWTMWKLPMFGCTDSASVLREIEECKKLYGKKCYIRCLG 161
Query: 294 FDNLRQVQCVSFIAFRP 244
FDN RQVQC SFI +P
Sbjct: 162 FDNTRQVQCASFIVHQP 178
Score = 47.4 bits (111), Expect(2) = 4e-10
Identities = 18/21 (85%), Positives = 18/21 (85%)
Frame = -2
Query: 431 PGTTTGRYWTMWKLPMFGCTD 369
PG GRYWTMWKLPMFGCTD
Sbjct: 116 PGYYDGRYWTMWKLPMFGCTD 136
Score = 36.6 bits (83), Expect(2) = 4e-10
Identities = 14/30 (46%), Positives = 20/30 (66%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLP 431
++DY I+S W PC+EF G V RE + +P
Sbjct: 87 QIDYVIKSGWAPCIEFDVQGTVTREGSTMP 116
>RBS_BATOE (P26985) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 175
Score = 44.7 bits (104), Expect = 2e-04
Identities = 41/140 (29%), Positives = 51/140 (36%), Gaps = 10/140 (7%)
Frame = -1
Query: 633 VSNG--GRIRCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXX 463
+SNG + R M VW K FET SYLPPLT + +
Sbjct: 25 LSNGTISKSRAMMVWEPFNNKFFETFSYLPPLTDDQITKQVDYILRNNWTPCLEFAGSDQ 84
Query: 462 XXXXXSTTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVR 304
T G DN Y M + P VL +PDAY+R
Sbjct: 85 AYVTHDNTVRMGDCASTYQDN---RYWTMWKLPMFGCIDGSQVLTEISACTKAFPDAYIR 141
Query: 303 IIGFDNLRQVQCVSFIAFRP 244
++ FD RQVQ F+ RP
Sbjct: 142 LVCFDANRQVQISGFLVHRP 161
Score = 39.7 bits (91), Expect(2) = 7e-07
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGC D
Sbjct: 106 RYWTMWKLPMFGCID 120
Score = 33.1 bits (74), Expect(2) = 7e-07
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFSKVGFVFREHNRLPRVLRXADTGQ 401
+VDY +R+ W PCLEF+ + H+ R+ A T Q
Sbjct: 64 QVDYILRNNWTPCLEFAGSDQAYVTHDNTVRMGDCASTYQ 103
>RBS_CHLMO (P17537) Ribulose bisphosphate carboxylase small chain, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunit)
Length = 168
Score = 49.7 bits (117), Expect = 7e-06
Identities = 36/132 (27%), Positives = 50/132 (37%), Gaps = 7/132 (5%)
Frame = -1
Query: 603 QVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXXS 445
+VW K++ET SYLPPLT + G T
Sbjct: 30 KVWQPVNNKQYETFSYLPPLTNQKIGRQVDYIINNGWTPCLEFADPSTSFVSNANAVRLQ 89
Query: 444 TTGSPGYYDXPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIGFDNLRQVQCV 265
S GYYD + P VL +P+ Y+R++ FDN++QVQC+
Sbjct: 90 GV-SAGYYDNRYWTMWKLPMFGC-TDPSQVLREVSACQVAFPNVYIRLVAFDNVKQVQCM 147
Query: 264 SFIAFRPPGCEE 229
F+ RP E
Sbjct: 148 GFLVQRPRNAAE 159
Score = 42.7 bits (99), Expect(2) = 1e-06
Identities = 17/25 (68%), Positives = 17/25 (68%)
Frame = -2
Query: 443 QQAPPGTTTGRYWTMWKLPMFGCTD 369
Q G RYWTMWKLPMFGCTD
Sbjct: 89 QGVSAGYYDNRYWTMWKLPMFGCTD 113
Score = 28.9 bits (63), Expect(2) = 1e-06
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY I + W PCLEF+
Sbjct: 57 QVDYIINNGWTPCLEFA 73
>RBS_EUGGR (P16881) Ribulose bisphosphate carboxylase small chains, chloroplast|
precursor (EC 4.1.1.39) (RuBisCO small subunits)
[Contains: Ribulose bisphosphate carboxylase small chain
P1; Ribulose bisphosphate carboxylase small chain P2;
Ribulose bispho
Length = 1273
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 997 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 1056
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 1057 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 1107
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 1108 SVKQVQVISFVVQRPSGSSSS 1128
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 709 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 768
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 769 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 819
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 820 SVKQVQVISFVVQRPSGSSSS 840
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 566 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 625
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 626 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 676
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 677 SVKQVQVISFVVQRPSGSSSS 697
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 279 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 338
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 339 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 389
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 390 SVKQVQVISFVVQRPSGSSSS 410
Score = 51.2 bits (121), Expect = 2e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 135 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 194
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 195 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 245
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 246 SVKQVQVISFVVQRPSGSSSS 266
Score = 50.8 bits (120), Expect = 3e-06
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 422 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 481
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 482 SGTAA-GYYDNH--------YWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 532
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 533 SVKQVQVISFVVQRPSGSSSS 553
Score = 48.1 bits (113), Expect = 2e-05
Identities = 41/135 (30%), Positives = 53/135 (39%), Gaps = 14/135 (10%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 1141 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 1200
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 1201 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRLAAFD 1251
Query: 288 NLRQVQCVSFIAFRP 244
+++QVQ +SF+ RP
Sbjct: 1252 SVKQVQVISFVVQRP 1266
Score = 47.0 bits (110), Expect = 5e-05
Identities = 43/141 (30%), Positives = 55/141 (39%), Gaps = 14/141 (9%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPEA-------GLTTXXXXXXXXXXXXXXXXXXXX 448
M+VW KKFET SYLPPL+ + GL+
Sbjct: 854 MKVWNPVNNKKFETFSYLPPLSDAQIAKQVDMIIAKGLSPCLEFAAPENSFIANDNTVRF 913
Query: 447 STTGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFD 289
S T + GYYD Y M + P VL YP YVR+ FD
Sbjct: 914 SGTAA-GYYDN--------RYWTMWKLPMFGCTDASQVLREISECRRAYPQCYVRL-AFD 963
Query: 288 NLRQVQCVSFIAFRPPGCEES 226
+++QVQ +SF+ RP G S
Sbjct: 964 SVKQVQVISFVVQRPSGSSSS 984
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 1202 GTAAGYYDNRYWTMWKLPMFGCTD 1225
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 1058 GTAAGYYDNRYWTMWKLPMFGCTD 1081
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 915 GTAAGYYDNRYWTMWKLPMFGCTD 938
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 770 GTAAGYYDNRYWTMWKLPMFGCTD 793
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 627 GTAAGYYDNRYWTMWKLPMFGCTD 650
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 340 GTAAGYYDNRYWTMWKLPMFGCTD 363
Score = 42.7 bits (99), Expect = 9e-04
Identities = 18/24 (75%), Positives = 18/24 (75%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G RYWTMWKLPMFGCTD
Sbjct: 196 GTAAGYYDNRYWTMWKLPMFGCTD 219
Score = 40.8 bits (94), Expect = 0.003
Identities = 17/24 (70%), Positives = 17/24 (70%), Gaps = 4/24 (16%)
Frame = -2
Query: 428 GTTTG----RYWTMWKLPMFGCTD 369
GT G YWTMWKLPMFGCTD
Sbjct: 483 GTAAGYYDNHYWTMWKLPMFGCTD 506
>RBS5_ACECL (P16133) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 184
Score = 45.1 bits (105), Expect = 2e-04
Identities = 39/132 (29%), Positives = 47/132 (35%), Gaps = 8/132 (6%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET SYLPPLT E +
Sbjct: 43 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 102
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 103 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 159
Query: 276 VQCVSFIAFRPP 241
VQ F+ RPP
Sbjct: 160 VQISGFLVHRPP 171
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 115 RYWTMWKLPMFGCTD 129
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 73 QVDYILANSWTPCLEFA 89
>RBS3_ACECL (P16131) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 183
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/138 (28%), Positives = 49/138 (35%), Gaps = 8/138 (5%)
Frame = -1
Query: 618 RIRCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXST 442
+ R M VW K FET SYLPPLT E +
Sbjct: 40 KCRDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNEN 99
Query: 441 TGSPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNL 283
G DN Y M + P VL+ +PDAY+R++ FD
Sbjct: 100 CIRMGPVSSTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDAN 156
Query: 282 RQVQCVSFIAFRPPGCEE 229
RQVQ F+ RPP +
Sbjct: 157 RQVQISGFLVHRPPSATD 174
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 114 RYWTMWKLPMFGCTD 128
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 72 QVDYILANSWTPCLEFA 88
>RBS7_ACECL (Q38693) Ribulose bisphosphate carboxylase small chain 7,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 7) (rbcS1)
Length = 183
Score = 46.2 bits (108), Expect = 8e-05
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET SYLPPLT E +
Sbjct: 42 RDMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 102 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSDMQACTKAFPDAYIRLVCFDANRQ 158
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 159 VQICGFLVHRPPSATD 174
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 114 RYWTMWKLPMFGCTD 128
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 72 QVDYILANSWTPCLEFA 88
>RBS5_ACEME (P16138) Ribulose bisphosphate carboxylase small chain 5,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 5)
Length = 183
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/136 (27%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET S+LPPLT E +
Sbjct: 42 RDMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 101
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 102 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQ 158
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 159 VQISGFLVHRPPSATD 174
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 114 RYWTMWKLPMFGCTD 128
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 72 QVDYILANSWTPCLEFA 88
>RBS4_ACECL (P16132) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 182
Score = 45.4 bits (106), Expect = 1e-04
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET SYLPPLT E +
Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 101 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 158 VQISGFLVHRPPSATD 173
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 113 RYWTMWKLPMFGCTD 127
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 71 QVDYILANSWTPCLEFA 87
>RBS4_ACEME (P16137) Ribulose bisphosphate carboxylase small chain 4,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 4)
Length = 182
Score = 43.9 bits (102), Expect = 4e-04
Identities = 38/136 (27%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET S+LPPLT E +
Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILANSWTPCLEFAASDQAYAGNENCI 100
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 101 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTNAFPDAYIRLVCFDANRQ 157
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 158 VQISGFLVHRPPSATD 173
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 113 RYWTMWKLPMFGCTD 127
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 71 QVDYILANSWTPCLEFA 87
>RBS1_ACEME (P16134) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 182
Score = 43.9 bits (102), Expect = 4e-04
Identities = 38/136 (27%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET S+LPPLT E +
Sbjct: 41 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 100
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 101 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 158 VQISGFLVHRPPSATD 173
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 113 RYWTMWKLPMFGCTD 127
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 71 QVDYILTNSWTPCLEFA 87
>RBS2_ACEME (P16135) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2) (Fragment)
Length = 173
Score = 43.9 bits (102), Expect = 4e-04
Identities = 38/136 (27%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET S+LPPLT E +
Sbjct: 32 REMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILTNSWTPCLEFAASDQAYAGNENCI 91
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 92 RMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLSEIQACTKAFPDAYIRLVCFDANRQ 148
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 149 VQISGFLVHRPPSATD 164
Score = 42.0 bits (97), Expect(2) = 3e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 104 RYWTMWKLPMFGCTD 118
Score = 28.5 bits (62), Expect(2) = 3e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 62 QVDYILTNSWTPCLEFA 78
>RBS6_ACECL (Q38692) Ribulose bisphosphate carboxylase small chain 6,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 6) (rbcS4)
Length = 182
Score = 45.8 bits (107), Expect = 1e-04
Identities = 39/136 (28%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET SYLPPLT E +
Sbjct: 41 REMMVWQPFNNKMFETFSYLPPLTDEQISKQVDYILANAWTPCLEFAASDQAYAGNENCI 100
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
+ G DN Y M + P VL +PDAY+R++ FD RQ
Sbjct: 101 TMGPVASTYQDN---RYWTMWKLPMFGCTDGSQVLTEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 158 VQISGFLVHRPPSATD 173
Score = 42.0 bits (97), Expect(2) = 4e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 113 RYWTMWKLPMFGCTD 127
Score = 28.1 bits (61), Expect(2) = 4e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 71 QVDYILANAWTPCLEFA 87
>RBS1_CHLRE (P00873) Ribulose bisphosphate carboxylase small chain 1,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 1)
Length = 185
Score = 47.8 bits (112), Expect = 3e-05
Identities = 39/127 (30%), Positives = 47/127 (37%), Gaps = 6/127 (4%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPE------AGLTTXXXXXXXXXXXXXXXXXXXXS 445
M VW K FET SYLPPLT E A
Sbjct: 46 MMVWTPVNNKMFETFSYLPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRF 105
Query: 444 TTGSPGYYDXPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIGFDNLRQVQCV 265
+ S YYD + R P VL +PDAYVR++ FDN +QVQ +
Sbjct: 106 GSVSCLYYDNRYWTMWKLPMFGC-RDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIM 164
Query: 264 SFIAFRP 244
F+ RP
Sbjct: 165 GFLVQRP 171
Score = 39.7 bits (91), Expect(2) = 5e-06
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGC D
Sbjct: 116 RYWTMWKLPMFGCRD 130
Score = 30.0 bits (66), Expect(2) = 5e-06
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFSK 467
++VDY + + W+PCLEF++
Sbjct: 73 AQVDYIVANGWIPCLEFAE 91
>RBS2_CHLRE (P08475) Ribulose bisphosphate carboxylase small chain 2,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 2)
Length = 185
Score = 46.6 bits (109), Expect = 6e-05
Identities = 38/132 (28%), Positives = 48/132 (36%), Gaps = 6/132 (4%)
Frame = -1
Query: 606 MQVWPIEGIKKFETLSYLPPLTTEGPPE------AGLTTXXXXXXXXXXXXXXXXXXXXS 445
M VW K FET SYLPPL+ E A
Sbjct: 46 MMVWTPVNNKMFETFSYLPPLSDEQIAAQVDYIVANGWIPCLEFAESDKAYVSNESAIRF 105
Query: 444 TTGSPGYYDXPILDNVEAAYVRMHRPPHXVLNXXXXXXXEYPDAYVRIIGFDNLRQVQCV 265
+ S YYD + R P VL +PDAYVR++ FDN +QVQ +
Sbjct: 106 GSVSCLYYDNRYWTMWKLPMFGC-RDPMQVLREIVACTKAFPDAYVRLVAFDNQKQVQIM 164
Query: 264 SFIAFRPPGCEE 229
F+ RP +
Sbjct: 165 GFLVQRPKSARD 176
Score = 39.7 bits (91), Expect(2) = 5e-06
Identities = 14/15 (93%), Positives = 14/15 (93%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGC D
Sbjct: 116 RYWTMWKLPMFGCRD 130
Score = 30.0 bits (66), Expect(2) = 5e-06
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -3
Query: 523 SRVDYXIRSKWVPCLEFSK 467
++VDY + + W+PCLEF++
Sbjct: 73 AQVDYIVANGWIPCLEFAE 91
>RBS3_ACEME (P16136) Ribulose bisphosphate carboxylase small chain 3,|
chloroplast precursor (EC 4.1.1.39) (RuBisCO small
subunit 3)
Length = 182
Score = 43.9 bits (102), Expect = 4e-04
Identities = 38/136 (27%), Positives = 48/136 (35%), Gaps = 8/136 (5%)
Frame = -1
Query: 612 RCMQVWPIEGIKKFETLSYLPPLTTEG-PPEAGLTTXXXXXXXXXXXXXXXXXXXXSTTG 436
R M VW K FET S+LPPLT E +
Sbjct: 41 RGMMVWQPFNNKMFETFSFLPPLTDEQISKQVDYILINSWTPCLEFAASDQAYAGNENCI 100
Query: 435 SPGYYDXPILDNVEAAYVRMHRPP-------HXVLNXXXXXXXEYPDAYVRIIGFDNLRQ 277
G DN Y M + P VL+ +PDAY+R++ FD RQ
Sbjct: 101 RMGPVASTYQDN---RYWTMWKLPMFGCTDASQVLSEIQACTKAFPDAYIRLVCFDANRQ 157
Query: 276 VQCVSFIAFRPPGCEE 229
VQ F+ RPP +
Sbjct: 158 VQISGFLVHRPPSATD 173
Score = 42.0 bits (97), Expect(2) = 5e-06
Identities = 15/15 (100%), Positives = 15/15 (100%)
Frame = -2
Query: 413 RYWTMWKLPMFGCTD 369
RYWTMWKLPMFGCTD
Sbjct: 113 RYWTMWKLPMFGCTD 127
Score = 27.7 bits (60), Expect(2) = 5e-06
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = -3
Query: 520 RVDYXIRSKWVPCLEFS 470
+VDY + + W PCLEF+
Sbjct: 71 QVDYILINSWTPCLEFA 87
>RBSC_RALEU (P09658) Ribulose bisphosphate carboxylase small chain, chromosomal|
(EC 4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 26.2 bits (56), Expect(2) = 4.2
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 324 YPDAYVRIIGFDNLRQVQCV--SFIAFRP 244
+P+ Y+R+ FD+ V+ V SFI RP
Sbjct: 75 FPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
Score = 23.1 bits (48), Expect(2) = 4.2
Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)
Frame = -2
Query: 476 VQQGW-LRLP*AQQAPPGTTTGRYWTMWKLPMFGCTD 369
+ QGW + L P T YW M+ LPMF D
Sbjct: 27 LNQGWAVGLEYTDDPHPRNT---YWEMFGLPMFDLRD 60
>RBSP_RALEU (Q59102) Ribulose bisphosphate carboxylase small chain, plasmid (EC|
4.1.1.39) (RuBisCO small subunit)
Length = 139
Score = 26.2 bits (56), Expect(2) = 6.9
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Frame = -1
Query: 324 YPDAYVRIIGFDNLRQVQCV--SFIAFRP 244
+P+ Y+R+ FD+ V+ V SFI RP
Sbjct: 75 FPNHYIRVTAFDSTHTVESVVMSFIVNRP 103
Score = 22.3 bits (46), Expect(2) = 6.9
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 410 YWTMWKLPMFGCTD 369
YW M+ LPMF D
Sbjct: 47 YWEMFGLPMFDLRD 60
Database: uniprot_sprot.fasta
Posted date: May 25, 2006 5:36 PM
Number of letters in database: 80,573,946
Number of sequences in database: 219,361
Lambda K H
0.318 0.135 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,212,914
Number of Sequences: 219361
Number of extensions: 1780527
Number of successful extensions: 4809
Number of sequences better than 10.0: 134
Number of HSP's better than 10.0 without gapping: 4224
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4693
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5881538857
frameshift window, decay const: 50, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)