Clone Name | rbasd11p08 |
---|---|
Clone Library Name | barley_pub |
>dbj|AB042069.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:6, subclone:16 Length = 5980 Score = 741 bits (374), Expect = 0.0 Identities = 554/604 (91%), Gaps = 14/604 (2%) Strand = Plus / Minus Query: 1 ccgcttgttgtatattataaatatggcacaggtgttgtatatgtgtaggccgtgctagaa 60 ||||||||||||||| |||||||| ||| |||||||||||||||||| | ||||||||| Sbjct: 1470 ccgcttgttgtatataataaatatcacactggtgttgtatatgtgtagccggtgctagaa 1411 Query: 61 tttacatatgcatatatgctccacaaccaatgctcgtacaaacacagatcatagagaag- 119 ||||||||||||| ||||||||||| ||| |||||||||||||||||||| |||| Sbjct: 1410 tttacatatgcat----gctccacaacctatgttcgtacaaacacagatcataccgaagg 1355 Query: 120 aaaattatgctctagtcggaaagcagagtcatggacaaaagtgaagttcacagaagacct 179 |||| |||||||| ||||| |||||||||| ||||||||||||||||||||| ||||| Sbjct: 1354 aaaaatatgctctggtcgggaagcagagtcctggacaaaagtgaagttcacaaaagacaa 1295 Query: 180 tcatacgacataggccattgtttcacctcgtagtttatgccttgccggactcctcgcaac 239 |||||| |||||||||||||| | ||||||||||| |||||||| ||||||||||||| Sbjct: 1294 tcatac---ataggccattgttttaactcgtagtttaggccttgccagactcctcgcaac 1238 Query: 240 ccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 299 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 1237 ccggtggcctgaatgcgatgaagctgacgcactgcacctggcgcaggttgtcgaagccga 1178 Query: 300 tgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgttaagcacnc 359 ||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||| | Sbjct: 1177 tgacgcggacataggcgtcagggtactccttcttgacctcctccacctcgttgagcac-c 1119 Query: 360 tgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngt 419 || ||||| ||||||||| ||||||||||||||||||||||||||||||||||| || || Sbjct: 1118 tgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagtatcgacc-gt 1061 Query: 420 cgtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcg 479 |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||| Sbjct: 1060 cgtagtacccggaggag-ctgttgtgctcacggaagacgaagccaaccttgctgaactcg 1002 Query: 480 aggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggagggccctccg 539 |||||||||||||||||||||||||||| |||||| | ||||||||||||||| |||||| Sbjct: 1001 aggcagggcacccacttggagcggatcaggtagtcga-cctgcttcaggaggg-cctccg 944 Query: 540 tggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccaca 599 ||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 943 tggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaatcggccaca 884 Query: 600 cctg 603 |||| Sbjct: 883 cctg 880 Score = 420 bits (212), Expect = e-114 Identities = 509/597 (85%), Gaps = 15/597 (2%) Strand = Plus / Minus Query: 2 cgcttgttgtatattataaatatggcacaggtgttgtatatgtgtaggccgtgctagaat 61 |||||| ||||||| |||||||| || ||||||||||||||||||| | |||||||||| Sbjct: 5872 cgcttgctgtatataataaatatcacataggtgttgtatatgtgtagtcagtgctagaat 5813 Query: 62 ttacatatgcatatatgctccacaaccaatgctcgtacaaacacagatcatagagaa-ga 120 ||||| ||||| ||||||||||||||| ||||||| ||||| || ||| |||| || Sbjct: 5812 ttacacatgcac----gctccacaaccaatgttcgtacatacacatattatacagaacga 5757 Query: 121 aaattatgctctagtcggaaagcagagtcatggacaaaagtgaagttcacagaagacctt 180 ||| |||||||| || || | |||||||| |||| |||||||||||||||| |||||||| Sbjct: 5756 aaaatatgctctggtaggca-gcagagtcgtggagaaaagtgaagttcacaaaagacctt 5698 Query: 181 catacgacataggccattgtttcacctcgtagtttatgccttgccggactcctcgcaacc 240 | ||| |||||||||||||||| ||| |||| || ||||||||||||||||| ||| Sbjct: 5697 cgtac---ataggccattgtttcaactcatagtctaggccttgccggactcctcacaagt 5641 Query: 241 cggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgat 300 |||| | ||||||| |||||| ||||||| |||||||| | || ||||||||||||| | Sbjct: 5640 cggtagactgaaggtgatgaaagtgacgcaatgcacctggcacatgttgtcgaagccgtt 5581 Query: 301 gatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgttaagcacnct 360 |||| |||| || ||||| |||||||||||||||||||||||||||| || ||||| || Sbjct: 5580 gataaggacatagccgtcaaggtactccttcttgacctcctccacctccttgagcac-ct 5522 Query: 361 gtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtc 420 ||||||| ||| ||||| ||||||||||||| ||||||| |||||| ||||| ||| || Sbjct: 5521 gtgtggc-gtcagtgcacccgaacataggcaacttccactttgtccggtatcagcca-tc 5464 Query: 421 gtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcga 480 |||||||| |||||| | |||||||||||||||||||||| ||||||||||| |||| Sbjct: 5463 atagtacccaggggag-ttattgtgctcacggaagacgaagctgaccttgctgaagtcga 5405 Query: 481 ggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggagggccctccgt 540 ||||||||||||||||||||||||||| ||||| | ||||| | ||||||| |||| | Sbjct: 5404 ggcagggcacccacttggagcggatcaggtagttga-cctgcgtaaggaggg-cctctat 5347 Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggcca 597 || ||||||||||||||||||||||||||| |||||||| || ||||| ||| |||| Sbjct: 5346 ggagaggggtggcaagtaagacagggtctcaaacttcttcatgccctcgatcagcca 5290 Score = 260 bits (131), Expect = 5e-66 Identities = 314/367 (85%), Gaps = 8/367 (2%) Strand = Plus / Minus Query: 237 aacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagc 296 |||| ||||||| ||||| ||||||||||||||||| |||||| |||||||||||||||| Sbjct: 4301 aaccaggtggcccgaaggtgatgaagctgacgcactacacctggcgcaggttgtcgaagc 4242 Query: 297 cgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgttaagca 356 ||||||| | ||| || ||||||||||||||||||||||||||||||||||| || |||| Sbjct: 4241 cgatgatgcagacataggcgtcagggtactccttcttgacctcctccacctccttgagca 4182 Query: 357 cnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatcggcc 416 | | | ||| ||||||||| || || ||||| |||||||||||||| ||||| | | Sbjct: 4181 ccttct-tgg-tgtcggtgcacccaaagataggtagcttccacattgtttagtattag-c 4125 Query: 417 ngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaac 476 ||| |||||||| ||||| ||| ||| |||||||||| | |||||||| || |||||| Sbjct: 4124 ggtcatagtacccagggga-cctattgcgctcacggaatatgaagccaatgttactgaac 4066 Query: 477 tcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggagggccct 536 |||||||||||||| ||||||||| |||||| |||||| | ||||||| ||||||| ||| Sbjct: 4065 tcgaggcagggcactcacttggaggggatcaggtagtcga-cctgcttgaggaggg-cct 4008 Query: 537 ccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggcc 596 || ||| ||||| |||||||| |||||| |||||||||||||||| ||||| ||||||| Sbjct: 4007 ccatggagagggatggcaagt--gacaggatctcgaacttcttgatgccctcgatcggcc 3950 Query: 597 acacctg 603 | ||||| Sbjct: 3949 aaacctg 3943 Score = 101 bits (51), Expect = 3e-18 Identities = 143/171 (83%), Gaps = 7/171 (4%) Strand = Plus / Minus Query: 1 ccgcttgttgtatattataaatatggcacaggtgttgtatatgtgtaggccgtgctagaa 60 ||||||||||||||| |||| ||| ||| ||||||||||||| || | |||||||| Sbjct: 4522 ccgcttgttgtatataataattatcacaccagtgttgtatatgt--agccggtgctagag 4465 Query: 61 tttacatatgcatatatgctccacaaccaatgctcgtacaaacacagatcatagagaaga 120 |||||| |||||| ||||||||||| ||| | ||||| |||||||||||| |||| | Sbjct: 4464 tttacacatgcat----gctccacaacctatgtttgtacatacacagatcatacagaaca 4409 Query: 121 aaa-ttatgctctagtcggaaagcagagtcatggacaaaagtgaagttcac 170 ||| ||||||| |||||||||||||||| |||| ||||||||||||||| Sbjct: 4408 aaaattatgcttaggtcggaaagcagagtcgtggagaaaagtgaagttcac 4358 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 771 acctgcatgcacctgatccttccgccattgctgac 737
>dbj|AB020943.1| Hordeum vulgare DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Hor-A Length = 605 Score = 640 bits (323), Expect = e-180 Identities = 367/374 (98%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 545 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct: 485 ttaagcac-ctgtgtggc-gtcggtgcatccgaacataggcagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcaa-cctgcttcagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>gb|M37328.1|WHTRUBIAA T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, exons 1 and 2 Length = 2205 Score = 607 bits (306), Expect = e-170 Identities = 422/453 (93%), Gaps = 6/453 (1%) Strand = Plus / Minus Query: 151 tggacaaaagtgaagttcacagaagaccttcatacgacataggccattgtttcacctcgt 210 ||||||||||||||||||||| |||| ||||||| || |||||||||||||||| ||| | Sbjct: 1572 tggacaaaagtgaagttcacaaaagatcttcatatgagataggccattgtttcaactcat 1513 Query: 211 agtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgca 270 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1512 agtttaggccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgca 1453 Query: 271 ctgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactcctt 330 ||||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||| Sbjct: 1452 ctgcacctggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactcctt 1393 Query: 331 cttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggc 390 ||||||||||||||||||||| ||||| ||||||||| ||||||||| |||||||||||| Sbjct: 1392 cttgacctcctccacctcgttgagcac-ctgtgtggc-gtcggtgcacccgaacataggc 1335 Query: 391 agcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcac 450 ||||||||||||||||||||||| || ||||||||||||||| ||| ||||||||||||| Sbjct: 1334 agcttccacattgtccagtatcgacc-gtcgtagtacccgggagag-ctgttgtgctcac 1277 Query: 451 ggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangt 510 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1276 ggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggt 1217 Query: 511 agtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctc 570 |||| | |||||||| ||||| | ||||||| ||||||||||||||||||||||||||| Sbjct: 1216 agtcga-cctgcttcgagaggg-cttccgtggagaggggtggcaagtaagacagggtctc 1159 Query: 571 gaacttcttgataccctcaatcggccacacctg 603 ||||||||||| |||||||| ||||||||||| Sbjct: 1158 aaacttcttgatgccctcaattggccacacctg 1126 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||| |||||||| Sbjct: 841 acctgcatgcacctgatccttccgccgttgctgac 807
>emb|AJ635206.1| Triticum durum ssp. durum partial mRNA for putative rubisco small subunit (rbcS gene) Length = 518 Score = 589 bits (297), Expect = e-165 Identities = 392/416 (94%), Gaps = 6/416 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 514 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 455 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 454 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 395 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||||||| Sbjct: 394 tcctccacctcgttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttcc 337 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||||||||| || ||| ||||| ||||||||| || ||||||||||||||||| Sbjct: 336 acattgtccagtatcgacc-gtcatagtatccgggggag-ctattgtgctcacggaagac 279 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 278 gaaaccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcga- 220 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||||||||||| ||||||||| ||||||||||| |||||||||||||||||||||| Sbjct: 219 cctgcttcaggaggg-cctccgtggagaggggtggcaggtaagacagggtctcgaacttc 161 Query: 578 ttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 160 ttgatgccctcaatcggccacacctgcatgcacctgatccttccgccgttgctgac 105
>dbj|AB020944.1| Agropyron intermedium DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Agr-A Length = 604 Score = 553 bits (279), Expect = e-154 Identities = 356/374 (95%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB042065.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase Small subunit, complete cds, clone:p6-1 Length = 638 Score = 553 bits (279), Expect = e-154 Identities = 365/386 (94%), Gaps = 6/386 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct: 634 gccttgccggactcctcgcaacccggtggcctgaatgcgatgaagctgacgcactgcacc 575 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 574 tggcgcaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 515 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| ||||| ||| ||||| ||||||||| ||||||||||||||||||| Sbjct: 514 tcctccacctcgttgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttcc 457 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||||||||| || |||||||||||||| |||| |||||||||||||||||||| Sbjct: 456 acattgtccagtatcgacc-gtcgtagtacccggaggag-ctgttgtgctcacggaagac 399 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 398 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtagtcga- 340 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 339 cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttc 281 Query: 578 ttgataccctcaatcggccacacctg 603 ||||| |||||||||||||||||||| Sbjct: 280 ttgatgccctcaatcggccacacctg 255 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 146 acctgcatgcacctgatccttccgccattgctgac 112
>emb|AJ131737.1|SCE131737 Secale cereale mRNA for hypothetical protein, clone 5 Length = 845 Score = 545 bits (275), Expect = e-152 Identities = 390/421 (92%), Gaps = 6/421 (1%) Strand = Plus / Minus Query: 213 tttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcact 272 |||||||||||||||| |||||||| | |||||||||||||| |||||||||||||||| Sbjct: 596 tttatgccttgccggattcctcgcagcntggtggcctgaaggcaatgaagctgacgcact 537 Query: 273 gcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttct 332 ||||||| |||| ||||||||||||||||| ||||| || ||||||||||||||||||| Sbjct: 536 gcacctggcgcatgttgtcgaagccgatgacgcggacataggcgtcagggtactccttct 477 Query: 333 tgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcag 392 |||||||||||||||| || ||||| ||| ||||| ||||||||| ||||||||||||| Sbjct: 476 tgacctcctccacctcattgagcac-ctgcgtggc-gtcggtgcacccgaacataggcaa 419 Query: 393 cttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacgg 452 ||||||||||||||||||||| || ||||||||||||||||||| |||||||||||||| Sbjct: 418 cttccacattgtccagtatcgacc-gtcgtagtacccgggggag-ttgttgtgctcacgg 361 Query: 453 aagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtag 512 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 360 aagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaggtag 301 Query: 513 tcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcga 572 || | ||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 300 tcga-cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagggtctcga 243 Query: 573 acttcttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctga 632 |||||||||| |||||||| ||||||||||||||||| |||||||||||||| ||||||| Sbjct: 242 acttcttgatgccctcaattggccacacctgcatgcatctgatccttccgccgttgctga 183 Query: 633 c 633 | Sbjct: 182 c 182
>dbj|AB020946.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-B Length = 787 Score = 545 bits (275), Expect = e-152 Identities = 355/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 668 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 667 ctgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 610 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 609 atcgacc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 552 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 551 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 493 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 492 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 434 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 433 atcggccacacctg 420 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020936.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-A Length = 605 Score = 545 bits (275), Expect = e-152 Identities = 355/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| |||||||||||||||||||||||||||||||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataagcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgacc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>gb|M37477.1|WHTRUBIAB T.aestivum ribulose-1,5-bisphosphate carboxylase/oxygenase (RUBISCO) gene, complete cds Length = 779 Score = 541 bits (273), Expect = e-151 Identities = 386/416 (92%), Gaps = 6/416 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 ||||||||||| |||||||| || |||||||||||||| |||||||||||||| |||||| Sbjct: 581 gccttgccggattcctcgcagcctggtggcctgaaggcaatgaagctgacgcattgcacc 522 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||| ||||||||| ||||||| ||||| || || ||||||||||||||||| ||| Sbjct: 521 tggcgcatgttgtcgaaaccgatgacgcggacatacgcatcagggtactccttcttaacc 462 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| ||||| |||||||||| |||||||| ||||||||||||||||||| Sbjct: 461 tcctccacctcgttgagcac-ctgtgtggcg-tcggtgcacccgaacataggcagcttcc 404 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 403 acattgtccagtatcgacc-gtcgtagtacccgggggagc-tgttgtgctcacggaagac 346 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct: 345 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcgac 286 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 | ||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||| Sbjct: 285 c-tgcttcaagagggcc-tccgtggagaggggtggcaagtaagacagggtctcgaacttc 228 Query: 578 ttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||| Sbjct: 227 ttgatgccctcaattggccacacctgcatgcatctgatccttccgccattgctgac 172
>dbj|AB020955.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-B Length = 787 Score = 537 bits (271), Expect = e-149 Identities = 354/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 667 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 610 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 609 atcgacc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 552 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 551 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 493 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 492 ggg-cttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 434 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 433 attggccacacctg 420 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020939.1| Triticum timopheevii subsp. armeniacum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ara-A Length = 604 Score = 537 bits (271), Expect = e-149 Identities = 357/378 (94%), Gaps = 6/378 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||| ||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacatagtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcggcc-gtcgtagtatccgggggag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctgcatg 607 |||||||||||||||||| Sbjct: 250 atcggccacacctgcatg 233 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020928.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-A Length = 604 Score = 537 bits (271), Expect = e-149 Identities = 354/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacccggtggcctgaaggcgctgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 || |||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcaaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 484 ttgagcac-ctgtgtggc-gtcggtgcacccgaacatagggagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>emb|AJ131738.1|SCE131738 Secale cereale mRNA for hypothetical protein, clone 9 Length = 875 Score = 531 bits (268), Expect = e-148 Identities = 389/422 (92%), Gaps = 6/422 (1%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 |||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 616 gtttatgccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 557 Query: 272 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 331 |||||||| |||| ||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 556 tgcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 497 Query: 332 ttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggca 391 |||||||||||||||||||| | ||| ||||||||| ||||||||| ||||||||||||| Sbjct: 496 ttgacctcctccacctcgttgatcac-ctgtgtggc-gtcggtgcacccgaacataggca 439 Query: 392 gcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacg 451 ||||||||||||||||||| ||||| |||||||||||||| || | |||||||||||| Sbjct: 438 gcttccacattgtccagtaccggcca-tcgtagtacccgggaga-cgcgttgtgctcacg 381 Query: 452 gaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangta 511 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 380 gaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggta 321 Query: 512 gtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcg 571 ||| | ||||||| ||||||| ||||||||||||| |||||||||||||||||||||||| Sbjct: 320 gtcga-cctgcttgaggaggg-cctccgtggtgagcggtggcaagtaagacagggtctcg 263 Query: 572 aacttcttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctg 631 ||||||||||| ||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 262 aacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgctg 203 Query: 632 ac 633 || Sbjct: 202 ac 201
>dbj|AB020950.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-B Length = 792 Score = 531 bits (268), Expect = e-148 Identities = 353/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 672 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 615 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 614 atcgacca-tcgtagtatccgggggag-ctgttgtgctcacggaagacgaagccaacctt 557 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 556 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 498 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 497 ggg-cttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 439 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 438 attggccacacctg 425 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||| ||||||||||||||||||||||||| Sbjct: 135 acctgcatgtacctgatccttccgccattgctgac 101
>dbj|AB020949.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-B Length = 792 Score = 531 bits (268), Expect = e-148 Identities = 353/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 792 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 733 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 732 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 673 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 672 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 615 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 614 atcgacca-tcgtagtatccgggggag-ctgttgtgctcacggaagacgaagccaacctt 557 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 556 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 498 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 497 ggg-cttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 439 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 438 attggccacacctg 425 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB042068.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p13-1 Length = 985 Score = 531 bits (268), Expect = e-148 Identities = 362/386 (93%), Gaps = 6/386 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| Sbjct: 981 gccttgccggactcctcgcaacccggtggcctgaaggcaatgaagctgacgcactgcacc 922 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || || ||||||||||||||||||| ||||| || |||||||||||||||||||||||| Sbjct: 921 tggcgtaggttgtcgaagccgatgacgcggacataggcgtcagggtactccttcttgacc 862 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| ||||| |||||| || ||||||||| ||||||||||||||||||| Sbjct: 861 tcctccacctcgttgagcac-ctgtgtagc-gtcggtgcacccgaacataggcagcttcc 804 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||||||||| || |||||||||||||||||| ||||||||||||||||| || Sbjct: 803 acattgtccagtatcgacca-tcgtagtacccgggggag-ctgttgtgctcacggaaaac 746 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | Sbjct: 745 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcaagtagtcga- 687 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||||||||||| ||||||||| ||||||||||||||||||||| |||||||||||| Sbjct: 686 cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagacagagtctcgaacttc 628 Query: 578 ttgataccctcaatcggccacacctg 603 ||||| |||||||||||||||||||| Sbjct: 627 ttgatgccctcaatcggccacacctg 602 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||| |||||||| Sbjct: 149 acctgcatgcacctgatccttccgccgttgctgac 115
>dbj|AB020954.1| Triticum urartu DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ura-B Length = 787 Score = 529 bits (267), Expect = e-147 Identities = 353/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 727 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 667 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 610 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||| ||||||||||||||||||||||||||| Sbjct: 609 atcgacc-gtcgtagtacccgggggag-ctgtagtgctcacggaagacgaagccaacctt 552 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 551 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 493 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 492 ggg-cttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 434 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 433 attggccacacctg 420 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020938.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-A Length = 607 Score = 529 bits (267), Expect = e-147 Identities = 353/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 607 tcctcgcaacctggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 548 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 547 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 488 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 487 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 430 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 429 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 372 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 371 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 313 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 312 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 254 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 253 atcggccacacctg 240 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020937.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-A Length = 611 Score = 529 bits (267), Expect = e-147 Identities = 353/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 611 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctgacgcaggttg 552 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 551 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 492 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 491 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 434 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 433 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 376 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 375 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 317 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 316 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 258 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 257 atcggccacacctg 244 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020935.1| Aegilops sharonensis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sha-A Length = 605 Score = 523 bits (264), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || |||||||| ||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgacca-tcgtagtatccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaagtagtcga-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||| ||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaatttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB042067.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p10-1 Length = 629 Score = 523 bits (264), Expect = e-145 Identities = 361/386 (93%), Gaps = 6/386 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct: 625 gccttgccggactcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacc 566 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||||||||||||||||| ||| |||||| || || ||||||||||||||||||||| Sbjct: 565 tggcgcaggttgtcgaagccgttgacacggacataggcatcagggtactccttcttgacc 506 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| ||||| || ||||| ||||||||| ||||||||||||||||||| Sbjct: 505 tcctccacctcgttgagcact-tgcgtggc-gtcggtgcacccgaacataggcagcttcc 448 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||||||||| || ||||||||||||||| ||| |||||||||||||||||||| Sbjct: 447 acattgtccagtatcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagac 390 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||| | Sbjct: 389 gaagccaaccttgctaaactcgaggcagggcacccacttggagcggatcaggtagtcta- 331 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||||||| Sbjct: 330 cctgctttaggaggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttc 272 Query: 578 ttgataccctcaatcggccacacctg 603 |||||||||||||||||||||||||| Sbjct: 271 ttgataccctcaatcggccacacctg 246 Score = 60.0 bits (30), Expect = 9e-06 Identities = 30/30 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattg 628 |||||||||||||||||||||||||||||| Sbjct: 143 acctgcatgcacctgatccttccgccattg 114
>dbj|AB020958.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B2 Length = 781 Score = 521 bits (263), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 721 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| || ||||| |||||||||||||||||||||| Sbjct: 661 ttgagcac-ctgtgtggc-gtcggtgcacccaaacatgggcagcttccacattgtccagt 604 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 603 atcgacc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 546 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 545 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 487 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| |||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 486 ggg-cttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctca 428 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 427 attggccacacctg 414 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||| ||||||||||| Sbjct: 135 acctgcatgcacctgatccttcccccattgctgac 101
>dbj|AB020934.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A3 Length = 605 Score = 521 bits (263), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 485 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggtagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgtcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020933.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A2 Length = 605 Score = 521 bits (263), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 485 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggtagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgtcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020932.1| Aegilops longissima DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Lon-A1 Length = 605 Score = 521 bits (263), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||||| Sbjct: 545 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctcaacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||||||||| ||||||||||| ||||||||||||||||||| Sbjct: 485 ttgagcac-ctgcgtggc-gtcggtgcacccgaacataggtagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgtcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020930.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A2 Length = 604 Score = 521 bits (263), Expect = e-145 Identities = 352/374 (94%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020959.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-B Length = 789 Score = 513 bits (259), Expect = e-142 Identities = 348/370 (94%), Gaps = 6/370 (1%) Strand = Plus / Minus Query: 234 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcga 293 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| Sbjct: 785 cgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcga 726 Query: 294 agccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgttaa 353 ||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || | Sbjct: 725 agccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcattga 666 Query: 354 gcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 |||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||||||| Sbjct: 665 gcac-ctgagtggc-gtcggtgcacccgaacataggcagcttccacattgtccagtatcg 608 Query: 414 gccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgctg 473 || ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| Sbjct: 607 acc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaaccttgctg 550 Query: 474 aactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggagggc 533 |||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| Sbjct: 549 aactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcaggaggg- 492 Query: 534 cctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcg 593 ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| | Sbjct: 491 cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattg 432 Query: 594 gccacacctg 603 |||||||||| Sbjct: 431 gccacacctg 422 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020952.1| Aegilops searsii DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sea-B Length = 728 Score = 513 bits (259), Expect = e-142 Identities = 351/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 728 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 669 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 668 tcgaagccgatgacgcggacatacgcgtcagggtactccttcttgacctcctccacctcg 609 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 608 ttgagcac-ctgtgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 551 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||| ||||| || |||||| |||||||||||||||||||||||||||||||| Sbjct: 550 atcgacc-gtcatagtaaccaggggag-ctgttgtgctcacggaagacgaagccaacctt 493 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 492 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 434 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| |||||||||||||||||| |||||||||||||||||||| |||||| Sbjct: 433 ggg-cctccgtggagaggggtggcaagtaagatagggtctcgaacttcttgatgccctca 375 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 374 attggccacacctg 361 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020931.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A3 Length = 604 Score = 513 bits (259), Expect = e-142 Identities = 351/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcccaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020929.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-A1 Length = 604 Score = 513 bits (259), Expect = e-142 Identities = 351/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || ||||||| |||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagagtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020927.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe1-A1 Length = 604 Score = 513 bits (259), Expect = e-142 Identities = 351/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020926.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 604 Score = 513 bits (259), Expect = e-142 Identities = 351/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||| Sbjct: 604 tcctcgcaacctggtggcctgaaggcgatgaaactgacgcactgcacctggcgcaggttg 545 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 544 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 485 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 484 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 427 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 426 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 369 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 368 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 310 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 309 ggg-cctccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 251 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 250 atcggccacacctg 237 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020941.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-A Length = 605 Score = 507 bits (256), Expect = e-140 Identities = 350/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcact-tgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||| |||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctaaactcgaggcagggcacccacttggagcggatcaggtagtcta-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020940.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-A Length = 605 Score = 507 bits (256), Expect = e-140 Identities = 350/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 605 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 546 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || || ||||||||||||||||||||||||||||||||| Sbjct: 545 tcgaagccgatgacacggacataggcatcagggtactccttcttgacctcctccacctcg 486 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| || ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 485 ttgagcact-tgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 428 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 427 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 370 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||| |||||||||||||||||||||||||||||||||| |||||| | ||||||| |||| Sbjct: 369 gctaaactcgaggcagggcacccacttggagcggatcaggtagtcta-cctgctttagga 311 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 ggg-cctctgtggagaggggtggcaagtaagacagggtctcgaacttcttgataccctca 252 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 251 atcggccacacctg 238 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020953.1| Aegilops squarrosa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Squ-B Length = 781 Score = 505 bits (255), Expect = e-140 Identities = 350/374 (93%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 781 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 722 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 721 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctcg 662 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 661 ttgagcac-ctgtgtggc-gtcggtgcacccgaacatgggcagcttccacattgtccagt 604 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||||||| |||||||||||||||||||||| ||| ||||| Sbjct: 603 atcgacc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgatgcctacctt 546 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||||||||||||||||||||||| |||||| | |||||||||||| Sbjct: 545 gctgaactcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcagga 487 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| |||||||||||||||||||| |||||||||||||||||| |||||| Sbjct: 486 ggg-cttccgtggagaggggtggcaagtaagacaaggtctcgaacttcttgatgccctca 428 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 427 attggccacacctg 414 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020951.1| Aegilops bicornis DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bic-B Length = 783 Score = 505 bits (255), Expect = e-140 Identities = 346/369 (93%), Gaps = 6/369 (1%) Strand = Plus / Minus Query: 235 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaa 294 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 783 gcaacccggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttgtcgaa 724 Query: 295 gccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgttaag 354 |||||||| |||||| || ||||||||||||||||||||||||||||||||||| || || Sbjct: 723 gccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcattgag 664 Query: 355 cacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatcgg 414 ||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||| | Sbjct: 663 cac-ctgtgtggc-gtcggtgcaaccgaacataggcagcttccacattgtccagtatc-g 607 Query: 415 ccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgctga 474 | |||||||||||||||||| ||||||||||||||||||||||||||||||||||| | Sbjct: 606 actatcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaaccttgctaa 548 Query: 475 actcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggagggcc 534 ||||||||||||||||||||||||||||||||| |||||| | ||||||||||||||| | Sbjct: 547 actcgaggcagggcacccacttggagcggatcaggtagtcga-cctgcttcaggaggg-c 490 Query: 535 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 594 ||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| || Sbjct: 489 ttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctcaattgg 430 Query: 595 ccacacctg 603 ||||||||| Sbjct: 429 ccacacctg 421 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020957.1| Triticum aestivum DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone CS-B1 Length = 787 Score = 504 bits (254), Expect = e-139 Identities = 349/373 (93%), Gaps = 6/373 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 667 atcagcac-ctgtgtggc-gtcagtgcacccgaacataggcagcttccacattgtccagt 610 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 609 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 552 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||| ||||||| Sbjct: 551 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgtttcagga 493 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 492 ggg-cctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctca 434 Query: 590 atcggccacacct 602 || |||||||||| Sbjct: 433 attggccacacct 421 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020956.1| Triticum turgidum subsp. dicoccoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Dic-B Length = 787 Score = 504 bits (254), Expect = e-139 Identities = 349/373 (93%), Gaps = 6/373 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| Sbjct: 787 tcctcgcaacccggtggcctataggcgatgaagctgacgcactgcacctggcgcaggttg 728 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 727 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 668 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||||||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 667 ttcagcac-ctgtgtggc-gtcagtgcacccgaacataggcagcttccacattgtccagt 610 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 ||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 609 atcggcc-gtcgtagtacccgggggag-ctgttgtgctcacggaagacgaagccaacctt 552 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||| ||||||| Sbjct: 551 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgtttcagga 493 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| |||||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 492 ggg-cctccgtggataggggtggcaggtaagacagggtctcgaacttcttgatgccctca 434 Query: 590 atcggccacacct 602 || |||||||||| Sbjct: 433 attggccacacct 421 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020948.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe3-B Length = 772 Score = 504 bits (254), Expect = e-139 Identities = 349/373 (93%), Gaps = 6/373 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct: 772 tcctcgcaacctggtggcctgaaggcgatgaagctgacgcactgcacctggcgcaggttg 713 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| |||||| || |||||||||||||||||||||||||||||||||||| Sbjct: 712 tcgaagccgatgacacggacataggcgtcagggtactccttcttgacctcctccacctcg 653 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | ||||| ||| ||||| ||||||||| ||||||||||||||||||||||||||||||| Sbjct: 652 ctgagcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttccacattgtccagt 595 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 |||| || ||||||||||||||| ||| |||||||||||||||||||||||||||||||| Sbjct: 594 atcgacc-gtcgtagtacccgggagag-ctgttgtgctcacggaagacgaagccaacctt 537 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||||| Sbjct: 536 gctgaactcgaggcagggcacccactttgagcggatcaggtagtcga-cctgcttcagga 478 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||||||| |||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 477 ggg-cctccgtggataggggtggcaagtaagacagggtctcgaacttcttgatgccctca 419 Query: 590 atcggccacacct 602 || |||||||||| Sbjct: 418 attggccacacct 406 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020947.1| Aegilops speltoides DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Spe2-B Length = 738 Score = 486 bits (245), Expect = e-134 Identities = 322/340 (94%), Gaps = 6/340 (1%) Strand = Plus / Minus Query: 264 tgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggt 323 |||||||||||||||| ||||||||||| |||||||||| |||||| || |||||||||| Sbjct: 738 tgacgcactgcacctggcgcaggttgtcaaagccgatgacacggacataggcgtcagggt 679 Query: 324 actccttcttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaa 383 |||||||||||||||||||||||||| | ||||| |||||||||| |||||||| ||||| Sbjct: 678 actccttcttgacctcctccacctcgctgagcac-ctgtgtggcg-tcggtgcacccgaa 621 Query: 384 cataggcagcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttg 443 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||| Sbjct: 620 cataggcagcttccacattgtccagtatcggcc-gtcgtagtacccgggggagc-tgttg 563 Query: 444 tgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcgg 503 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 562 tgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcgg 503 Query: 504 atcangtagtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagaca 563 |||| |||||| | ||||||||||||||| ||||||||| |||||||||||||||||||| Sbjct: 502 atcaggtagtcga-cctgcttcaggaggg-cctccgtggagaggggtggcaagtaagaca 445 Query: 564 gggtctcgaacttcttgataccctcaatcggccacacctg 603 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 444 gggtctcgaacttcttgatgccctcaatcggccacacctg 405 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>dbj|AB020942.1| Secale cereale DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Sec-A Length = 591 Score = 482 bits (243), Expect = e-133 Identities = 347/374 (92%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||| Sbjct: 591 tcctcgcaacccggtggcctaaaggcgatgaagctgacgcactgcacctggcgcaggttg 532 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 531 tcgaagccgatgacgcggacataggcgtcagggtactccttcttgacctcctccacctca 472 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || ||||| ||| ||||| ||| ||||| ||||||||||||||||||||||||||||||| Sbjct: 471 ttgagcac-ctgagtggc-gtccgtgcagccgaacataggcagcttccacattgtccagt 414 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | ||||| ||||||||| ||||||||| ||||||||||| |||||||||||||||||||| Sbjct: 413 accggcc-gtcgtagtaaccgggggag-ctgttgtgctcgcggaagacgaagccaacctt 356 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||| ||||||||||||||||||| |||||| | ||||||||| || Sbjct: 355 gctgaactcgaggcagggtacccacttggagcggatcaggtagtcga-cctgcttcaaga 297 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| | ||||||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 296 ggg-cttccgtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 238 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 237 atcggccacacctg 224 Score = 69.9 bits (35), Expect = 1e-08 Identities = 35/35 (100%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| Sbjct: 135 acctgcatgcacctgatccttccgccattgctgac 101
>gb|U43493.1|HVU43493 Hordeum vulgare ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 816 Score = 476 bits (240), Expect = e-131 Identities = 382/422 (90%), Gaps = 6/422 (1%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 |||||||||||||| ||||||| ||| || |||||| |||| |||||||||||||||||| Sbjct: 550 gtttatgccttgcccgactcctggcagcctggtggcttgaaagcgatgaagctgacgcac 491 Query: 272 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 331 |||||||| |||| ||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 490 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 431 Query: 332 ttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggca 391 |||||||||||||||||||| ||||| ||||||||| ||||||||||||||||||||||| Sbjct: 430 ttgacctcctccacctcgttgagcac-ctgtgtggc-gtcggtgcatccgaacataggca 373 Query: 392 gcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacg 451 ||||||||||||||||||| ||||| ||||||||||| || || | |||||||||||| Sbjct: 372 gcttccacattgtccagtaccggcca-tcgtagtacccaggagatgc-gttgtgctcacg 315 Query: 452 gaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangta 511 ||||| ||| ||||||||||||||||||||||| |||||||||||||||||||||| ||| Sbjct: 314 gaagatgaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggta 255 Query: 512 gtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcg 571 ||| | ||||||| ||||||| |||||||| |||| ||||| | |||||||||||||||| Sbjct: 254 gtcga-cctgcttaaggaggg-cctccgtgctgagtggtggaaggtaagacagggtctcg 197 Query: 572 aacttcttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctg 631 ||||||||||| ||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 196 aacttcttgatgccctcgatgggccacacctgcatgcacctgatccttccaccgttgctg 137 Query: 632 ac 633 || Sbjct: 136 ac 135
>dbj|AB042066.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p9-1 Length = 739 Score = 432 bits (218), Expect = e-118 Identities = 351/388 (90%), Gaps = 6/388 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 735 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 676 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||| ||||||||| |||||||| ||||| || |||||||||||||||||||||||| Sbjct: 675 tgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 616 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| | ||| ||||||||| ||| ||||| ||||||||||||||||||| Sbjct: 615 tcctccacctcgttgatcac-ctgtgtggc-gtcagtgcacccgaacataggcagcttcc 558 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 |||||||||| || ||||| ||||||||||| || || | ||||||||||||||||| Sbjct: 557 acattgtccaataccggcca-tcgtagtacccaggagatgc-gttgtgctcacggaagat 500 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 ||| ||||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 499 gaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcga- 441 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||| ||||||| |||||||| |||| ||||||| |||||||||||||||||||||| Sbjct: 440 cctgcttgaggaggg-cctccgtgctgagcggtggcaggtaagacagggtctcgaacttc 382 Query: 578 ttgataccctcaatcggccacacctgca 605 ||||| ||||| || ||||||||||||| Sbjct: 381 ttgatgccctcgatgggccacacctgca 354 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||| || |||||||| Sbjct: 149 acctgcatgcacctgatccttccaccgttgctgac 115
>dbj|AB042064.1| Triticum aestivum rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds, clone:p2-1 Length = 653 Score = 416 bits (210), Expect = e-113 Identities = 349/388 (89%), Gaps = 6/388 (1%) Strand = Plus / Minus Query: 218 gccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacc 277 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| Sbjct: 649 gccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacc 590 Query: 278 tgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacc 337 || |||| ||||||||| |||||||| ||||| || |||||||||||||||||||||||| Sbjct: 589 tggcgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttcttgacc 530 Query: 338 tcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttcc 397 |||||||||||||| | ||| ||| ||||| ||||||||| ||||||||||||||||||| Sbjct: 529 tcctccacctcgttgatcac-ctgcgtggc-gtcggtgcacccgaacataggcagcttcc 472 Query: 398 acattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagac 457 ||||||||||||| ||||| ||||||||||| ||||| | ||||||||||||||||| Sbjct: 471 acattgtccagtaccggcca-tcgtagtacccaggggatgc-gttgtgctcacggaagat 414 Query: 458 gaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaac 517 || ||||||||||||||||||||||| |||||||||||||||||||||| |||||| | Sbjct: 413 aaacccaaccttgctgaactcgaggcaaggcacccacttggagcggatcaggtagtcga- 355 Query: 518 cctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttc 577 ||||||| ||||||| |||| ||| |||| ||||||| ||| |||||||||||||||||| Sbjct: 354 cctgcttgaggaggg-cctctgtgctgagcggtggcaggtaggacagggtctcgaacttc 296 Query: 578 ttgataccctcaatcggccacacctgca 605 || || ||||| || ||||||||||||| Sbjct: 295 ttaatgccctcgatgggccacacctgca 268 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||| |||||||||||| || |||||||| Sbjct: 149 acctgcatgcgcctgatccttccaccgttgctgac 115
>dbj|AB020960.1| Bromus catharticus DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Bro-B Length = 784 Score = 404 bits (204), Expect = e-109 Identities = 337/374 (90%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||||||||||||| ||||||||||||||||||||||||||||||| |||| ||| Sbjct: 784 tcctcgcaacccggtggcttgaaggcgatgaagctgacgcactgcacctgacgcaagtta 725 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||| |||||||| ||||| || ||||||||||||||||||||||||||||||| ||| Sbjct: 724 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttgacctcctccagctcc 665 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| |||||||||||||||||||||| ||||||||||||||||| Sbjct: 664 ttgatcac-ctgtgaggca-tcggtgcatccgaacataggcaacttccacattgtccagt 607 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | ||||| |||||||| || || || | ||||||||||||||||||||||||||||| Sbjct: 606 aacggcca-tcgtagtatccaggagatgca-ttgtgctcacggaagacgaagccaacctt 549 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||| |||||||||||||||||||||| |||||| | ||||||||||| Sbjct: 548 gctgaactcgaggcacggcacccacttggagcggatcaagtagtcga-tctgcttcagga 490 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||| Sbjct: 489 ggg-cctcggtggagaggggtggcaagtaagacagggtctcgaacttcttgatgccctca 431 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 430 attggccacacctg 417 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||| ||||||| Sbjct: 132 acctgcatgcacctgatccttccgccgctgctgac 98
>emb|X83095.1|ASRBCSSS A.squarrosa mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase, small subunit Length = 837 Score = 396 bits (200), Expect = e-107 Identities = 372/422 (88%), Gaps = 6/422 (1%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 ||||| |||||||||||||||||||| ||||||||| || ||||||||||||||||| || Sbjct: 576 gtttaggccttgccggactcctcgcagcccggtggcttggaggcgatgaagctgacggac 517 Query: 272 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 331 |||||||| |||| ||||||||| |||||||| ||| || | |||||||||||||||| Sbjct: 516 tgcacctgacgcatgttgtcgaatccgatgatgcggcaataggggtcagggtactccttc 457 Query: 332 ttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggca 391 ||||||||||||||||| | ||| ||| |||| || ||| ||||||||||||||| | Sbjct: 456 ctgacctcctccacctcggggatcac-ctgggtggggg-cggggcatccgaacataggga 399 Query: 392 gcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacg 451 | ||||||||||||||||| ||||| ||||||||||| ||||| | |||||| ||||| Sbjct: 398 gtttccacattgtccagtaccggcca-tcgtagtacccaggggatac-gttgtgttcacg 341 Query: 452 gaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangta 511 ||||| ||| |||||||| || |||||||||||||||||||||||||||||||||| ||| Sbjct: 340 gaagatgaacccaacctttctaaactcgaggcagggcacccacttggagcggatcaggta 281 Query: 512 gtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcg 571 ||| ||| ||||| |||||| ||||||||| |||| ||||||||||| |||||||||||| Sbjct: 280 gtcgacc-tgcttaaggagg-ccctccgtgctgagcggtggcaagtaggacagggtctcg 223 Query: 572 aacttcttgataccctcaatcggccacacctgcatgcacctgatccttccgccattgctg 631 ||||||||||||||||| || ||||||||||||||||||||||||||||| || |||||| Sbjct: 222 aacttcttgataccctcgatgggccacacctgcatgcacctgatccttccaccgttgctg 163 Query: 632 ac 633 || Sbjct: 162 ac 161
>gb|AF192776.1|AF192776 Avena clauda clone Cl5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 383 bits (193), Expect = e-103 Identities = 357/404 (88%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 atcggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF192775.1|AF192775 Avena strigosa clone Str5 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 383 bits (193), Expect = e-103 Identities = 357/404 (88%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| || || || ||||||||||||| ||||||||||||||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatgac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 143 atcggccacacctgcatgcacctgatccttccgccgttgctgac 100
>gb|AF192774.1|AF192774 Avena strigosa clone Str3 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 383 bits (193), Expect = e-103 Identities = 357/404 (88%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| || || || ||||||||||||| ||||||||||||||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatgac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 143 atcggccacacctgcatgcacctgatccttccgccgttgctgac 100
>emb|X00234.1|TARUB1 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39) (ribulosebisphosphate carboxylase, clone 512) Length = 611 Score = 377 bits (190), Expect = e-101 Identities = 315/349 (90%), Gaps = 6/349 (1%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 ||||| |||||||||||||||||||| ||||||||| ||||||| ||||||||||||||| Sbjct: 344 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcaatgaagctgacgcac 285 Query: 272 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 331 |||||||| |||| ||||||||| |||||||| |||||||| |||||||||||||||||| Sbjct: 284 tgcacctggcgcatgttgtcgaatccgatgatgcggacgtacgcgtcagggtactccttc 225 Query: 332 ttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggca 391 |||||||||||||||||||| | ||| ||||||||| ||||||||| ||||||||||||| Sbjct: 224 ttgacctcctccacctcgttgatcac-ctgtgtggc-gtcggtgcacccgaacataggca 167 Query: 392 gcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacg 451 ||||||||||||||||||| ||||| ||||||||||||||| || | ||||||||||| Sbjct: 166 gcttccacattgtccagtagcggcc-gtcgtagtacccgggaga-cgcattgtgctcacg 109 Query: 452 gaagacgaagccaaccttgctgaactcgaggcagggcacccacttggagcggatcangta 511 ||||| ||| || |||||||||||||| ||||| |||||||||||||||||||||| ||| Sbjct: 108 gaagatgaacccgaccttgctgaactcaaggcaaggcacccacttggagcggatcaggta 49 Query: 512 gtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaag 560 ||| | ||||||| ||||||| |||||||| |||| ||||||| ||||| Sbjct: 48 gtcca-cctgcttgaggaggg-cctccgtgctgagcggtggcaggtaag 2
>gb|AF192779.1|AF192779 Avena maroccana clone Ma4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 377 bits (190), Expect = e-101 Identities = 354/401 (88%), Gaps = 6/401 (1%) Strand = Plus / Minus Query: 233 tcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcg 292 ||||| ||||||||| ||||||||||||||||||||||||||||||| || | ||||||| Sbjct: 494 tcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttgtcg 435 Query: 293 aagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcgtta 352 ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| || Sbjct: 434 aagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctccttg 375 Query: 353 agcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 | ||| ||||| ||| ||||||||| |||||||| ||||||||||||||||||||||| | Sbjct: 374 atcac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagtacc 317 Query: 413 ggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaaccttgct 472 ||| ||||||||| ||||| | | ||| |||||| ||||||| ||||||||||||||| Sbjct: 316 tgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaaccttgct 259 Query: 473 gaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcaggaggg 532 |||||| |||||||| ||||||||||||||||||| | |||| | |||||||||||||| Sbjct: 258 gaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcaggaggg 200 Query: 533 ccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatc 592 ||||| | ||| ||||||| ||||||||||||||||||||||||||| ||||||||| Sbjct: 199 -cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctcaatc 141 Query: 593 ggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 140 ggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF097360.1|AF097360 Avena strigosa ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 375 bits (189), Expect = e-100 Identities = 356/404 (88%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||||||||||| || || || ||||||||||||| ||||||||| ||||||||||| Sbjct: 437 acgaagccgatgatgcgaacataggcgtcagggtacttcttcttgacgtcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatgac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| |||||||||||||| |||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctccgagagtggtggcaagtaagaaagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||||||||||||||||||||||||| |||||||| Sbjct: 143 atcggccacacctgcatgcacctgatccttccgccgttgctgac 100
>gb|AF192777.1|AF192777 Avena clauda clone Cl9 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 367 bits (185), Expect = 3e-98 Identities = 355/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctctacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||| | ||| |||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatgac-ctgcgaggca-tcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||||| || || |||||| ||||||| |||||| ||||| Sbjct: 319 acctgcc-gtcgtagtatccgggggtgc-tgccgtgctcgcggaagatgaagcccacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | | |||||||||| Sbjct: 261 gctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatc-tgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||||| ||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 gggcc-tcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| || |||||||| Sbjct: 143 atcggccacacctgcatgcacctgatccttccaccgttgctgac 100
>gb|AF097361.1|AF097361 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 367 bits (185), Expect = 3e-98 Identities = 355/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||| |||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatgac-ctgtgaggc-gtcggtgcacccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||||| | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggggtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactcaaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| ||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| ||||| ||||| || |||||||| Sbjct: 143 atcggccacacctgcatgcatctgattcttccaccgttgctgac 100
>gb|AF104250.1|AF104250 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 367 bits (185), Expect = 3e-98 Identities = 355/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| |||| ||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| ||| ||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggc-gtcagtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactcgaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | || ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 143 attggccacacctgcatgcacctgatccttccgccgttgctgac 100
>gb|AF192780.1|AF192780 Avena maroccana clone Ma7 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 359 bits (181), Expect = 7e-96 Identities = 354/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| |||| ||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| || || || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 | | ||| ||||| |||| || ||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ctgatcac-ctgtgaggcg-tcagtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | || || |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtgc-tgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactcgaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | || ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 || |||||||||||||||||||||||||||||||| |||||||| Sbjct: 143 attggccacacctgcatgcacctgatccttccgccgttgctgac 100
>gb|AF192773.1|AF192773 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 359 bits (181), Expect = 7e-96 Identities = 354/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| ||||||||||||||||||| ||||||||||| || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| || ||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtactcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 atcggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF097359.1|AF097359 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 343 bits (173), Expect = 4e-91 Identities = 352/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| ||||||||||||||||||| |||||||| || || | |||| Sbjct: 497 tcctcgcagcctggtggcttgaaggcgatgaagctgacacactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 || ||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tctaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | | || | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaattcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | ||| ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 atcggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF104249.1|AF104249 Avena vaviloviana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 343 bits (173), Expect = 4e-91 Identities = 352/404 (87%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| || || || ||||||||||||||||||||||||||||| ||||| Sbjct: 437 tcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcaacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| |||| |||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggcg-tcggtgcagccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | || || |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcgtagtatccgggagtgc-tgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||| || ||||||||||||||||||| | |||| | | |||||||||| Sbjct: 261 gctgaactcgaggcaaggaacccacttggagcggatcaagaagtcgatc-tgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||||| ||| | ||| || |||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 gggcc-tcctctgagagtggcggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 || ||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 ataggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF202646.1|AF202646 Avena clauda clone ClG4 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 586 Score = 341 bits (172), Expect = 2e-90 Identities = 333/379 (87%), Gaps = 6/379 (1%) Strand = Plus / Minus Query: 224 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 283 ||||| |||||||| || |||||| |||||||||||||||||||||||||||| || || Sbjct: 585 ccggattcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacgg 526 Query: 284 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctcc 343 | |||||||||||||||||| ||||| || |||||||||||||||||||||||||||||| Sbjct: 525 atgttgtcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctcc 466 Query: 344 acctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattg 403 ||||| || | ||| ||||| ||| ||||||||| |||||||| |||| ||||||||||| Sbjct: 465 acctccttgatcac-ctgtgaggc-gtcggtgcacccgaacatgggcaacttccacattg 408 Query: 404 tccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagcc 463 ||||||| | ||| ||||||||| ||||||| | ||| |||||| ||||||| |||||| Sbjct: 407 tccagtacctgcc-gtcgtagtatccgggggtg-ctgccgtgctcgcggaagatgaagcc 350 Query: 464 aaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgct 523 ||||||||||||||| |||||||| ||||||||||||||||||| | |||| | ||||| Sbjct: 349 aaccttgctgaactcaaggcagggaacccacttggagcggatcaagaagtcga-tctgct 291 Query: 524 tcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgata 583 | ||||||| ||||| | ||| |||||||||||||| |||||||||||||||||||| Sbjct: 290 ttaggaggg-cctcctctgagagtggtggcaagtaagaaagggtctcgaacttcttgatg 232 Query: 584 ccctcaatcggccacacct 602 ||||||||||||||||||| Sbjct: 231 ccctcaatcggccacacct 213 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||| ||||||||||| || |||||||| Sbjct: 134 acctgcatgcatctgatccttccaccgttgctgac 100
>gb|AF192778.1|AF192778 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 504 Score = 335 bits (169), Expect = 1e-88 Identities = 351/404 (86%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||| |||||||||||||| || || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaaactgacgcactgcacttgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactctttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||||| ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 377 ttgatcac-ctgtgaggc-gtcggtgcacccgaacatgggcagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||| ||||| || || | | ||| |||||| ||||||| |||||||||||| Sbjct: 319 acctgcc-gtcatagtatccaggagtg-ctgccgtgctcgcggaagatgaagccaacctt 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactccaggcagggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| ||||| ||||||| |||||||||||||||||| |||||||| |||||| Sbjct: 202 ggg-cctcctctgtgagtggtggcaggtaagacagggtctcgaatttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 || ||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 ataggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF096617.1|AF096617 Avena sterilis subsp. ludoviciana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 504 Score = 335 bits (169), Expect = 1e-88 Identities = 351/404 (86%), Gaps = 6/404 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| ||||||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 497 tcctcgcagcccggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 438 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 437 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 378 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | ||| ||| | ||| |||||||||||||||||| || ||||||||||||||||||| Sbjct: 377 ttgatcac-ctgggaggc-gtcggtgcatccgaacatggggagcttccacattgtccagt 320 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||| ||||| || || | | ||| |||||| ||||||| ||||||| | | Sbjct: 319 acctgcc-gtcatagtatccaggagtg-ctgccgtgctcgcggaagatgaagccaccttg 262 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||||||||| || ||||||||||||||||||| | |||| | ||||||||||| Sbjct: 261 gctgaactcgaggcaaggaacccacttggagcggatcaagaagtcga-tctgcttcagga 203 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| ||||| ||||||| ||||||||||||||||||||||||||| |||||| Sbjct: 202 ggg-cctcctctgtgagtggtggcaggtaagacagggtctcgaacttcttgatgccctca 144 Query: 590 atcggccacacctgcatgcacctgatccttccgccattgctgac 633 || ||||||||||||||||| | ||| ||||| || |||||||| Sbjct: 143 ataggccacacctgcatgcatcggattcttccaccgttgctgac 100
>gb|AF202645.1|AF202645 Avena clauda clone ClG2 ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 600 Score = 331 bits (167), Expect = 2e-87 Identities = 328/374 (87%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 593 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 534 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 533 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 474 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||| | |||| |||||||| |||||||| |||||||||||||||||||||| Sbjct: 473 ttgatgac-ctgggaggcg-tcggtgcagccgaacatgggcagcttccacattgtccagt 416 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||||| || || |||||| ||||||| |||||||||||| Sbjct: 415 acctgcc-gtcgtagtatccgggggtgc-tgccgtgctcgcggaagatgaagccaacctt 358 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 |||||||||||||||||| ||||||||||||||||||| | |||| | ||| ||||||| Sbjct: 357 gctgaactcgaggcagggaacccacttggagcggatcaagaagtcga-tctgtttcagga 299 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| || ||| ||||||| |||||| |||||||||||||||||||| |||||| Sbjct: 298 ggg-cctcctcggagagtggtggcaggtaagaaagggtctcgaacttcttgatgccctca 240 Query: 590 atcggccacacctg 603 ||||||||||||| Sbjct: 239 gtcggccacacctg 226
>dbj|AK121444.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141B14, full insert sequence Length = 984 Score = 327 bits (165), Expect = 3e-86 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 725 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 666 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 665 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 606 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 605 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 548 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| | ||| || ||||||| ||||||| || || Sbjct: 547 agtacctgcca-tcgtagtatccgggggatc-tgtggttctcacggtagacgaatccgac 490 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 489 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 431 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 430 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 372 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 371 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 325
>dbj|AK119219.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-046-F11, full insert sequence Length = 828 Score = 327 bits (165), Expect = 3e-86 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 571 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 512 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 511 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 452 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 451 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 394 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| | ||| || ||||||| ||||||| || || Sbjct: 393 agtacctgcca-tcgtagtatccgggggatc-tgtggttctcacggtagacgaatccgac 336 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 335 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 277 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 276 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 218 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 217 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 171
>gb|AF202648.1|AF202648 Avena maroccana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 620 Score = 327 bits (165), Expect = 3e-86 Identities = 332/380 (87%), Gaps = 6/380 (1%) Strand = Plus / Minus Query: 224 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 283 ||||| |||||||| ||||||||| |||| ||||||||||||||||||||||| || || Sbjct: 619 ccggattcctcgcagcccggtggcttgaatgcgatgaagctgacgcactgcacttgacgg 560 Query: 284 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctcc 343 | |||||||||||||||||| || || || |||||||||||||||||||||||||||||| Sbjct: 559 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 500 Query: 344 acctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattg 403 ||||| || | ||| ||||| ||| ||| ||||| |||||||| |||||||||||||||| Sbjct: 499 acctccttgatcac-ctgtgaggc-gtcagtgcagccgaacatgggcagcttccacattg 442 Query: 404 tccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagcc 463 ||||||| | ||| ||||||||| ||||| | | ||| |||||| ||||||| |||||| Sbjct: 441 tccagtacctgcc-gtcgtagtatccgggagtg-ctgccgtgctcgcggaagatgaagcc 384 Query: 464 aaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgct 523 |||||||||||||||||||||||| ||||||||||||||||||| | |||| | ||||| Sbjct: 383 aaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcga-tctgct 325 Query: 524 tcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgata 583 ||||||||| ||||| | || ||||||| ||||||||||||||||||||||||||| Sbjct: 324 tcaggaggg-cctcctctgacagtggtggcaggtaagacagggtctcgaacttcttgatg 266 Query: 584 ccctcaatcggccacacctg 603 |||||||| ||||||||||| Sbjct: 265 ccctcaattggccacacctg 246 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||| |||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgac 100
>dbj|AK070556.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062J10, full insert sequence Length = 2409 Score = 327 bits (165), Expect = 3e-86 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 572 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 513 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 512 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 453 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 452 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 395 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| | ||| || ||||||| ||||||| || || Sbjct: 394 agtacctgcca-tcgtagtatccgggggatc-tgtggttctcacggtagacgaatccgac 337 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 336 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 278 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 277 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 219 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 218 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 172
>dbj|AK061611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F07, full insert sequence Length = 830 Score = 327 bits (165), Expect = 3e-86 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 574 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 515 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 514 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 455 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 454 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 397 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| | ||| || ||||||| ||||||| || || Sbjct: 396 agtacctgcca-tcgtagtatccgggggatc-tgtggttctcacggtagacgaatccgac 339 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 338 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 280 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 279 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 221 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 220 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 174
>dbj|D00643.1|RICRUBPC1 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS1139 Length = 830 Score = 327 bits (165), Expect = 3e-86 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 569 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 510 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 509 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 450 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 449 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 392 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| | ||| || ||||||| ||||||| || || Sbjct: 391 agtacctgcca-tcgtagtatccgggggatc-tgtggttctcacggtagacgaatccgac 334 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 333 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 275 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 274 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 216 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 215 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 169
>gb|L22155.1|RICCPRBCLA Oryza sativum mitochondrial ribulose bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 808 Score = 325 bits (164), Expect = 1e-85 Identities = 352/407 (86%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 549 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctaacg 490 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 489 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 430 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 429 tccttgagcac-ctgggtggcg-tcggtgcacccgaacatgggcagcttccacatggtcc 372 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| ||||||||| || ||||| | ||| || ||||||| |||| || || || Sbjct: 371 agtacctgcc-gtcgtagtatccagggga-cttgtggttctcacggtagacaaatccgac 314 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 313 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 255 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 254 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 196 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 195 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 149
>gb|AF200303.1|AF200303 Avena clauda ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, nuclear gene encoding chloroplast protein, partial cds Length = 594 Score = 323 bits (163), Expect = 4e-85 Identities = 327/374 (87%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| |||||||||||||||||||||||||||| || || | |||| Sbjct: 587 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacttgacggatgttg 528 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 |||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||| Sbjct: 527 tcgaagccgatgatgcggacataggcgtcagggtactccttcttgacctcctccacctcc 468 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||||| |||| || ||||| |||||||| |||| ||||||||||||||||| Sbjct: 467 ttgatgac-ctgtgaggcg-tctgtgcagccgaacatgggcaacttccacattgtccagt 410 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||||| || || |||| | ||||||| |||||||||||| Sbjct: 409 acctgcc-gtcgtagtatccgggggtgc-tgccgtgcacgcggaagatgaagccaacctt 352 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | | |||||||||| Sbjct: 351 gctgaactcaaggcagggaacccacttggagcggatcaagaagtcgatc-tgcttcagga 293 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||||| ||| | ||| ||||||||||||||||||||||||||||||||||| |||||| Sbjct: 292 gggcc-tcctcagagagtggtggcaagtaagacagggtctcgaacttcttgatgccctca 234 Query: 590 atcggccacacctg 603 || ||||||||||| Sbjct: 233 attggccacacctg 220 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||| |||||||| Sbjct: 134 acctgcatgcacctgatccttccgccgttgctgac 100
>gb|AF202647.1|AF202647 Avena agadiriana ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 593 Score = 321 bits (162), Expect = 2e-84 Identities = 331/380 (87%), Gaps = 6/380 (1%) Strand = Plus / Minus Query: 224 ccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgc 283 ||||| |||||||| || |||||| |||| ||||||||||||||||||||||| || || Sbjct: 592 ccggattcctcgcagcctggtggcttgaatgcgatgaagctgacgcactgcacttggcgg 533 Query: 284 aggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctcc 343 | |||||||||||||||||| || || || |||||||||||||||||||||||||||||| Sbjct: 532 atgttgtcgaagccgatgatgcgaacataggcgtcagggtactccttcttgacctcctcc 473 Query: 344 acctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattg 403 ||||| || | ||| ||||| ||| || ||||| |||||||| |||||||||||||||| Sbjct: 472 acctccttgatcac-ctgtgaggca-tcagtgcagccgaacatgggcagcttccacattg 415 Query: 404 tccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagcc 463 ||||||| | ||| |||||||| ||||| | || || |||||| ||||||| |||||| Sbjct: 414 tccagtacctgcca-tcgtagtatccgggagtgc-tgccgtgctcgcggaagatgaagcc 357 Query: 464 aaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgct 523 |||||||||||||||||||||||| ||||||||||||||||||| | |||||| ||||| Sbjct: 356 aaccttgctgaactcgaggcagggaacccacttggagcggatcaagaagtcaa-tctgct 298 Query: 524 tcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgata 583 ||||||||| ||||| | ||| ||||||| ||||||||||||||||||||||||||| Sbjct: 297 tcaggaggg-cctcctctgagagtggtggcaggtaagacagggtctcgaacttcttgatg 239 Query: 584 ccctcaatcggccacacctg 603 |||||||||||||| ||||| Sbjct: 238 ccctcaatcggccatacctg 219
>gb|AF017364.1|AF017364 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 854 Score = 311 bits (157), Expect = 2e-81 Identities = 350/407 (85%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||| ||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 597 gactcttcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 538 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 537 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 478 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| ||| ||||| |||||||| |||||||||||||| |||| Sbjct: 477 tccttgagcac-ctgggtggc-gtcagtgcacccgaacatgggcagcttccacatggtcc 420 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| |||| || ||||||| |||| || || || Sbjct: 419 agtacctgcca-tcgtagtatccggggga-tctgtggttctcacggtagacaaatccgac 362 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| | ||| || | |||||||| Sbjct: 361 cttgctgaactcgaggcagggcacccacttggaacggaggaggtactcga-tctgcttca 303 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||| || ||||| |||||| ||||||| |||||| |||||||||||||||||||| ||| Sbjct: 302 gga-ggtcctccacggtgagcggtggcaggtaagagagggtctcgaacttcttgatgccc 244 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 243 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 197
>gb|AF052305.1|AF052305 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 835 Score = 303 bits (153), Expect = 4e-79 Identities = 349/407 (85%), Gaps = 6/407 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || |||||||||| |||| | ||||||||||| | | Sbjct: 560 gactcctcgcagcccgggggcttgtaggcgatgaaactgatgagctgcacctgcctgacg 501 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||| | |||||||| ||||||| | | Sbjct: 500 ttgtcgaagccgatgatacggacgaatgcatcagggttcgccttcttggcctcctcgagc 441 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| |||||| || ||||| |||||||| |||||||||||||| |||| Sbjct: 440 tccttgagcac-ctgggtggcg-tcagtgcacccgaacatgggcagcttccacatggtcc 383 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| ||||| || |||||||| | ||| || ||||||| ||||||| || || Sbjct: 382 agtacctgcca-tcgtaatatccgggggatc-tgtggttctcacggtagacgaatccgac 325 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | | ||||||| Sbjct: 324 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcgatc-tgcttca 266 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||||| || ||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 265 ggaggtcc-tccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 207 Query: 587 tcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 206 tcaatcggccacacctgcatgcacctgatcctgccgccattgctgac 160
>dbj|AB020945.1| Avena sativa DNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds, clone Ave-A Length = 590 Score = 299 bits (151), Expect = 6e-78 Identities = 324/374 (86%), Gaps = 6/374 (1%) Strand = Plus / Minus Query: 230 tcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttg 289 |||||||| || |||||| ||||||||||||||||||||||||||||||| || | |||| Sbjct: 590 tcctcgcagcctggtggcttgaaggcgatgaagctgacgcactgcacctgacggatgttg 531 Query: 290 tcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacctcg 349 ||||| |||||||| ||||| || |||||||||||||||||||| |||||||||||||| Sbjct: 530 tcgaaaccgatgatgcggacataggcgtcagggtactccttcttcacctcctccacctcc 471 Query: 350 ttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtccagt 409 || | || ||| | ||| ||||||||| |||||||| |||||||||||||||||||||| Sbjct: 470 ttgatgac-ctgggaggc-gtcggtgcagccgaacatgggcagcttccacattgtccagt 413 Query: 410 atcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaacctt 469 | | ||| ||||||||| ||||| | | ||| |||||||||||||| |||||| ||||| Sbjct: 412 acctgcc-gtcgtagtatccgggagtg-ctgccgtgctcacggaagatgaagcccacctt 355 Query: 470 gctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttcagga 529 ||||||||| |||||||| ||||||||||||||||||| | |||| | |||||||| || Sbjct: 354 gctgaactccaggcagggaacccacttggagcggatcaggaagtcga-tctgcttcaaga 296 Query: 530 gggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctca 589 ||| ||||| | || ||||||| |||||||||||||||||||||||||| |||||| Sbjct: 295 ggg-cctcctctgacagtggtggcagataagacagggtctcgaacttcttgatgccctca 237 Query: 590 atcggccacacctg 603 |||||||||||||| Sbjct: 236 atcggccacacctg 223 Score = 46.1 bits (23), Expect = 0.14 Identities = 32/35 (91%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||| ||||||||||| || |||||||| Sbjct: 135 acctgcatgcatctgatccttccaccgttgctgac 101
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 274 bits (138), Expect = 3e-70 Identities = 322/376 (85%), Gaps = 6/376 (1%) Strand = Plus / Plus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 10079783 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079842 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 10079843 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079902 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| ||| ||||| |||||||| |||||||||||||| |||| Sbjct: 10079903 tccttgagcac-ctgggtggc-gtcagtgcacccgaacatgggcagcttccacatggtcc 10079960 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| |||| || ||||||| ||||||| || || Sbjct: 10079961 agtacctgcca-tcgtagtatccggggga-tctgtggttctcacggtagacgaatccgac 10080018 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | |||||||| Sbjct: 10080019 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcga-tctgcttca 10080077 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||| || ||||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 10080078 gga-ggtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 10080136 Query: 587 tcaatcggccacacct 602 |||||||||||||||| Sbjct: 10080137 tcaatcggccacacct 10080152 Score = 178 bits (90), Expect = 1e-41 Identities = 231/273 (84%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 11262298 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11262239 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 11262238 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11262179 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 11262178 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 11262121 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||||||| ||||||| ||||| Sbjct: 11262120 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcacggtagacgaatccaac 11262063 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 11262062 cttgctgaactcgaggcaaggcacccacttgga 11262030 Score = 174 bits (88), Expect = 2e-40 Identities = 314/382 (82%), Gaps = 6/382 (1%) Strand = Plus / Minus Query: 223 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 282 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 11276965 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276906 Query: 283 caggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctc 342 | |||||||||||||||||| || || | || || || || |||||||| ||||||| Sbjct: 11276905 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276846 Query: 343 cacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacatt 402 | ||| || ||||| ||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 11276845 gagctccttgagcac-ctgggtggca-tcagtgcatccgaacataggcagcttccacatg 11276788 Query: 403 gtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagc 462 |||||||| | ||| || |||||||| || || ||||| || ||||||| ||||||| | Sbjct: 11276787 gtccagtacctgcca-tcatagtacccaggaga-cctgtggttctcacggtagacgaacc 11276730 Query: 463 caaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgc 522 | ||||| || ||||||||||| |||||||| ||||| |||| || ||| || | |||| Sbjct: 11276729 cgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcga-tctgc 11276671 Query: 523 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 582 |||| || || |||| ||||| ||||||| ||| ||||||||||| ||||||||||| Sbjct: 11276670 ttcaaga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgat 11276612 Query: 583 accctcaatcggccacacctgc 604 || |||||||||||||||||| Sbjct: 11276611 gccttcaatcggccacacctgc 11276590 Score = 93.7 bits (47), Expect = 7e-16 Identities = 218/270 (80%), Gaps = 4/270 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 11320108 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11320049 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||| ||||| ||||| || ||| | || |||||||| ||||||| ||||||| | | Sbjct: 11320048 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319989 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct: 11319988 tccttgagcact-tgggtggc-atcggtgcatccaaacatgggcagtttccacatggtcc 11319931 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | || ||| ||||| ||||| || |||| | ||||||| ||||||| || || Sbjct: 11319930 agtacctacc-gtcatagtatccgggtga-tctgtgattctcacggtagacgaatccgac 11319873 Query: 467 cttgctgaactcgaggcagggcacccactt 496 |||||||||||| | ||| ||||||||||| Sbjct: 11319872 cttgctgaactccaagcaaggcacccactt 11319843 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 11261990 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 11261931 Query: 601 ctg 603 ||| Sbjct: 11261930 ctg 11261928 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctg 603 |||||||| ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 11319790 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 11319738 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||| ||||||||||||||||||||||| Sbjct: 11319639 acctgcatgcatctgatccttccgccattgctgac 11319605 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||| |||||||||||||||||||||| Sbjct: 11261821 acctgcatgcacttgatccttccgccattgctgac 11261787 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| |||||||||||||| Sbjct: 10080252 acctgcatgcacctgatcctgccgccattgctgac 10080286 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgcc 624 |||||||||||| ||||||||||||| Sbjct: 11264859 acctgcatgcacttgatccttccgcc 11264834 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 299 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 11266884 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 11266837
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 274 bits (138), Expect = 3e-70 Identities = 322/376 (85%), Gaps = 6/376 (1%) Strand = Plus / Plus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 10079668 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 10079727 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 10079728 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 10079787 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| ||| ||||| |||||||| |||||||||||||| |||| Sbjct: 10079788 tccttgagcac-ctgggtggc-gtcagtgcacccgaacatgggcagcttccacatggtcc 10079845 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| |||| || ||||||| ||||||| || || Sbjct: 10079846 agtacctgcca-tcgtagtatccggggga-tctgtggttctcacggtagacgaatccgac 10079903 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | |||||||| Sbjct: 10079904 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcga-tctgcttca 10079962 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||| || ||||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 10079963 gga-ggtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 10080021 Query: 587 tcaatcggccacacct 602 |||||||||||||||| Sbjct: 10080022 tcaatcggccacacct 10080037 Score = 178 bits (90), Expect = 1e-41 Identities = 231/273 (84%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 11261969 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 11261910 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 11261909 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 11261850 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 11261849 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 11261792 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||||||| ||||||| ||||| Sbjct: 11261791 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcacggtagacgaatccaac 11261734 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 11261733 cttgctgaactcgaggcaaggcacccacttgga 11261701 Score = 174 bits (88), Expect = 2e-40 Identities = 314/382 (82%), Gaps = 6/382 (1%) Strand = Plus / Minus Query: 223 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 282 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 11276636 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 11276577 Query: 283 caggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctc 342 | |||||||||||||||||| || || | || || || || |||||||| ||||||| Sbjct: 11276576 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 11276517 Query: 343 cacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacatt 402 | ||| || ||||| ||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 11276516 gagctccttgagcac-ctgggtggca-tcagtgcatccgaacataggcagcttccacatg 11276459 Query: 403 gtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagc 462 |||||||| | ||| || |||||||| || || ||||| || ||||||| ||||||| | Sbjct: 11276458 gtccagtacctgcca-tcatagtacccaggaga-cctgtggttctcacggtagacgaacc 11276401 Query: 463 caaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgc 522 | ||||| || ||||||||||| |||||||| ||||| |||| || ||| || | |||| Sbjct: 11276400 cgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcga-tctgc 11276342 Query: 523 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 582 |||| || || |||| ||||| ||||||| ||| ||||||||||| ||||||||||| Sbjct: 11276341 ttcaaga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgat 11276283 Query: 583 accctcaatcggccacacctgc 604 || |||||||||||||||||| Sbjct: 11276282 gccttcaatcggccacacctgc 11276261 Score = 93.7 bits (47), Expect = 7e-16 Identities = 218/270 (80%), Gaps = 4/270 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 11319779 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 11319720 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||| ||||| ||||| || ||| | || |||||||| ||||||| ||||||| | | Sbjct: 11319719 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 11319660 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct: 11319659 tccttgagcact-tgggtggc-atcggtgcatccaaacatgggcagtttccacatggtcc 11319602 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | || ||| ||||| ||||| || |||| | ||||||| ||||||| || || Sbjct: 11319601 agtacctacc-gtcatagtatccgggtga-tctgtgattctcacggtagacgaatccgac 11319544 Query: 467 cttgctgaactcgaggcagggcacccactt 496 |||||||||||| | ||| ||||||||||| Sbjct: 11319543 cttgctgaactccaagcaaggcacccactt 11319514 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 11261661 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 11261602 Query: 601 ctg 603 ||| Sbjct: 11261601 ctg 11261599 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctg 603 |||||||| ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 11319461 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 11319409 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||| ||||||||||||||||||||||| Sbjct: 11319310 acctgcatgcatctgatccttccgccattgctgac 11319276 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||| |||||||||||||||||||||| Sbjct: 11261492 acctgcatgcacttgatccttccgccattgctgac 11261458 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| |||||||||||||| Sbjct: 10080137 acctgcatgcacctgatcctgccgccattgctgac 10080171 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgcc 624 |||||||||||| ||||||||||||| Sbjct: 11264530 acctgcatgcacttgatccttccgcc 11264505 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 299 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 11266555 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 11266508
>emb|AL731739.4|CNS08C7O Oryza sativa chromosome 12, . BAC OSJNBa0056I18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 145890 Score = 274 bits (138), Expect = 3e-70 Identities = 322/376 (85%), Gaps = 6/376 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||| ||||| ||| || ||||||||||||||| | ||||||||||| | | Sbjct: 82838 gactcctcgcagcccgggggcttgtaggcgatgaagctgatgagctgcacctgcctgacg 82779 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||||| | || ||||||||| |||||||| ||||||| | | Sbjct: 82778 ttgtcgaagccgatgatacggacgaatgcatcagggtacgccttcttggcctcctcgagc 82719 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| ||| ||||| |||||||| |||||||||||||| |||| Sbjct: 82718 tccttgagcac-ctgggtggc-gtcagtgcacccgaacatgggcagcttccacatggtcc 82661 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | ||| |||||||| |||||||| |||| || ||||||| ||||||| || || Sbjct: 82660 agtacctgcca-tcgtagtatccggggga-tctgtggttctcacggtagacgaatccgac 82603 Query: 467 cttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgcttca 526 ||||||||||||||||||||||||||||||||| |||| || ||| || | |||||||| Sbjct: 82602 cttgctgaactcgaggcagggcacccacttggaacggagcaggtactcga-tctgcttca 82544 Query: 527 ggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccc 586 ||| || ||||| |||||| ||||||| ||| || |||||||||||||||||||| ||| Sbjct: 82543 gga-ggtcctccacggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccc 82485 Query: 587 tcaatcggccacacct 602 |||||||||||||||| Sbjct: 82484 tcaatcggccacacct 82469 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| |||||||||||||| Sbjct: 82369 acctgcatgcacctgatcctgccgccattgctgac 82335
>emb|X00235.1|TARUB2 Wheat mRNA fragment for small subunit precursor of RuBPCase (EC 4.1.1.39 ribulosebisphosphate carboxylase) clones 234 and 406 Length = 743 Score = 244 bits (123), Expect = 3e-61 Identities = 178/194 (91%), Gaps = 2/194 (1%) Strand = Plus / Minus Query: 440 gttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacccacttgga 499 ||||||||||||||||| ||| ||||||||||||||||||||||| |||||||||||||| Sbjct: 271 gttgtgctcacggaagatgaacccaaccttgctgaactcgaggcaaggcacccacttgga 212 Query: 500 gcggatcangtagtcaaccctgcttcaggagggccctccgtggtgaggggtggcaagtaa 559 |||||||| |||||| ||| ||||| ||||||||| |||||| |||| ||||||| |||| Sbjct: 211 gcggatcaggtagtcgacc-tgcttgaggagggcc-tccgtgctgagcggtggcaggtaa 154 Query: 560 gacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcacctgatcctt 619 ||||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 153 gacagggtctcgaacttcttgatgccctcgatgggccacacctgcatgcacctgatcctt 94 Query: 620 ccgccattgctgac 633 || || |||||||| Sbjct: 93 ccaccgttgctgac 80 Score = 200 bits (101), Expect = 4e-48 Identities = 128/137 (93%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 495 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 436 Query: 272 tgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttc 331 |||||||| |||| ||||||||| |||||||| ||||| || |||||||||||||||||| Sbjct: 435 tgcacctgacgcatgttgtcgaatccgatgatgcggacatacgcgtcagggtactccttc 376 Query: 332 ttgacctcctccacctc 348 ||||||||||||||||| Sbjct: 375 ttgacctcctccacctc 359
>emb|X07515.1|OSRBCS Rice rbcS gene for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1110 Score = 208 bits (105), Expect = 2e-50 Identities = 298/352 (84%), Gaps = 8/352 (2%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| | ||||||||||| | ||||||||||||||||||||||||| Sbjct: 836 aggcgatgaagctgatgagctgcacctgcctaacgttgtcgaagccgatgatacggacga 777 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 | || ||||||||| |||||||| ||||||| | ||| || | || ||| |||||| || Sbjct: 776 atgcatcagggtacgccttcttggcctcctcgagctccttgacgac-ctgggtggcg-tc 719 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | ||| ||||||||| || | Sbjct: 718 ggtgcacccgaacatgggcagcttccacatggtccagtacctgcc-gtcgtagtatccag 660 Query: 432 gggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacc 491 |||| | ||| || ||||||| |||| || || ||||||||||||||||||||||||| | Sbjct: 659 ggga-cttgtggttctcacggtagacaaatccgaccttgctgaactcgaggcagggca-c 602 Query: 492 cacttggagcggatc-angtagtcaaccctgcttcaggagggccctccgtggtgaggggt 550 |||||||| |||| | | ||| || | ||||||||||| || ||||| |||||| ||| Sbjct: 601 cacttggaacggagctaggtactcga-tctgcttcagga-ggtcctccacggtgagcggt 544 Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacct 602 |||| ||| || |||||||||||||||||||| ||||||||||||||||||| Sbjct: 543 ggcaggtaggagagggtctcgaacttcttgatgccctcaatcggccacacct 492 Score = 48.1 bits (24), Expect = 0.035 Identities = 27/28 (96%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccat 626 |||||||||||||||||||| ||||||| Sbjct: 403 acctgcatgcacctgatcctgccgccat 376
>dbj|AK099574.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013036G21, full insert sequence Length = 947 Score = 200 bits (101), Expect = 4e-48 Identities = 339/411 (82%), Gaps = 6/411 (1%) Strand = Plus / Minus Query: 223 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 282 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 587 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 528 Query: 283 caggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctc 342 | |||||||||||||||||| || || | || || || || |||||||| ||||||| Sbjct: 527 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 468 Query: 343 cacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacatt 402 | ||| || ||||| ||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 467 gagctccttgagcac-ctgggtggca-tcagtgcatccgaacataggcagcttccacatg 410 Query: 403 gtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagc 462 |||||||| | ||| || |||||||| || || ||||| || ||||||| ||||||| | Sbjct: 409 gtccagtacctgcca-tcatagtacccaggaga-cctgtggttctcacggtagacgaacc 352 Query: 463 caaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgc 522 | ||||| || ||||||||||| |||||||| ||||| |||| || ||| || | | ||| Sbjct: 351 cgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcgatc-tgc 293 Query: 523 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 582 |||| |||| || || ||||| ||||||| ||| ||||||||||| ||||||||||| Sbjct: 292 ttcaagaggtcc-tcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgat 234 Query: 583 accctcaatcggccacacctgcatgcacctgatccttccgccattgctgac 633 || |||||||||||||||||||| || ||||||||||| || |||||||| Sbjct: 233 gccttcaatcggccacacctgcatacagctgatccttccaccgttgctgac 183
>gb|AY445627.1| Oryza sativa (japonica cultivar-group) ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; chloroplast Length = 860 Score = 178 bits (90), Expect = 1e-41 Identities = 231/273 (84%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 566 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 507 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 506 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 447 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 446 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 389 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||||||| ||||||| ||||| Sbjct: 388 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcacggtagacgaatccaac 331 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 330 cttgctgaactcgaggcaaggcacccacttgga 298 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 258 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 199 Query: 601 ctgcatgcacctgatccttccgccattgctgac 633 |||||||||| |||||||||||||||||||||| Sbjct: 198 ctgcatgcacttgatccttccgccattgctgac 166
>dbj|AK068555.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013156H12, full insert sequence Length = 899 Score = 178 bits (90), Expect = 1e-41 Identities = 231/273 (84%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 583 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 524 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 523 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 464 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 463 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 406 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||||||| ||||||| ||||| Sbjct: 405 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcacggtagacgaatccaac 348 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 347 cttgctgaactcgaggcaaggcacccacttgga 315 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 275 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 216 Query: 601 ctgcatgcacctgatccttccgccattgctgac 633 |||||||||| |||||||||||||||||||||| Sbjct: 215 ctgcatgcacttgatccttccgccattgctgac 183
>emb|BX119951.3|CNS09S4U Oryza sativa chromosome 12, . BAC OJ1523_A01 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 127267 Score = 178 bits (90), Expect = 1e-41 Identities = 231/273 (84%), Gaps = 4/273 (1%) Strand = Plus / Plus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 109756 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 109815 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 109816 ttgtcgaagccgatgatacggacaaaggcatcggggtaggccttcttggcctcctcgagc 109875 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 109876 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 109933 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||||||| ||||||| ||||| Sbjct: 109934 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcacggtagacgaatccaac 109991 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 109992 cttgctgaactcgaggcaaggcacccacttgga 110024 Score = 174 bits (88), Expect = 2e-40 Identities = 314/382 (82%), Gaps = 6/382 (1%) Strand = Plus / Plus Query: 223 gccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccg 282 ||||||||||||||||||||| ||| || ||||||||||||| | |||||||||||| Sbjct: 95089 gccggactcctcgcaacccgggggcttgtaggcgatgaagctaatcaactgcacctgcct 95148 Query: 283 caggttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctc 342 | |||||||||||||||||| || || | || || || || |||||||| ||||||| Sbjct: 95149 gacgttgtcgaagccgatgatgcgaacaaatgcatctggatatgccttcttggcctcctc 95208 Query: 343 cacctcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacatt 402 | ||| || ||||| ||| ||||| || ||||||||||||||||||||||||||||| Sbjct: 95209 gagctccttgagcac-ctgggtggca-tcagtgcatccgaacataggcagcttccacatg 95266 Query: 403 gtccagtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagc 462 |||||||| | ||| || |||||||| || || ||||| || ||||||| ||||||| | Sbjct: 95267 gtccagtacctgcca-tcatagtacccaggaga-cctgtggttctcacggtagacgaacc 95324 Query: 463 caaccttgctgaactcgaggcagggcacccacttggagcggatcangtagtcaaccctgc 522 | ||||| || ||||||||||| |||||||| ||||| |||| || ||| || | |||| Sbjct: 95325 cgaccttactaaactcgaggcaaggcacccatttggaccggagcaggtactcga-tctgc 95383 Query: 523 ttcaggagggccctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgat 582 |||| || || |||| ||||| ||||||| ||| ||||||||||| ||||||||||| Sbjct: 95384 ttcaaga-ggtcctcgaccgtgagcggtggcaggtacgacagggtctcaaacttcttgat 95442 Query: 583 accctcaatcggccacacctgc 604 || |||||||||||||||||| Sbjct: 95443 gccttcaatcggccacacctgc 95464 Score = 93.7 bits (47), Expect = 7e-16 Identities = 218/270 (80%), Gaps = 4/270 (1%) Strand = Plus / Plus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 51946 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 52005 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||| ||||| ||||| || ||| | || |||||||| ||||||| ||||||| | | Sbjct: 52006 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 52065 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct: 52066 tccttgagcact-tgggtggc-atcggtgcatccaaacatgggcagtttccacatggtcc 52123 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | || ||| ||||| ||||| || |||| | ||||||| ||||||| || || Sbjct: 52124 agtacctacc-gtcatagtatccgggtga-tctgtgattctcacggtagacgaatccgac 52181 Query: 467 cttgctgaactcgaggcagggcacccactt 496 |||||||||||| | ||| ||||||||||| Sbjct: 52182 cttgctgaactccaagcaaggcacccactt 52211 Score = 77.8 bits (39), Expect = 4e-11 Identities = 57/63 (90%) Strand = Plus / Plus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 110064 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 110123 Query: 601 ctg 603 ||| Sbjct: 110124 ctg 110126 Score = 73.8 bits (37), Expect = 6e-10 Identities = 49/53 (92%) Strand = Plus / Plus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctg 603 |||||||| ||||| |||||||||||||| || |||||||||||||||||||| Sbjct: 52264 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctg 52316 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||| |||||||||||||||||||||| Sbjct: 110233 acctgcatgcacttgatccttccgccattgctgac 110267 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Plus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||| ||||||||||||||||||||||| Sbjct: 52415 acctgcatgcatctgatccttccgccattgctgac 52449 Score = 44.1 bits (22), Expect = 0.55 Identities = 25/26 (96%) Strand = Plus / Plus Query: 599 acctgcatgcacctgatccttccgcc 624 |||||||||||| ||||||||||||| Sbjct: 107195 acctgcatgcacttgatccttccgcc 107220 Score = 40.1 bits (20), Expect = 8.6 Identities = 41/48 (85%) Strand = Plus / Plus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccga 299 ||||||||||||| | ||||||||| |||| | |||||| ||||||| Sbjct: 105170 aggcgatgaagctaatgcactgcacatgcctgacgttgtcaaagccga 105217
>dbj|D00644.1|RICRUBPC2 Oryza sativa (japonica cultivar-group) mRNA for the small subunit of ribulose-1,5-bisphosphate carboxylase, complete cds, clone pOSSS2106 Length = 895 Score = 163 bits (82), Expect = 9e-37 Identities = 229/273 (83%), Gaps = 4/273 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 |||||||||||||| || ||| || ||||||||||||| | |||||||||||| | | Sbjct: 581 gactcctcgcaacctgggggcttgtaggcgatgaagctaatcaactgcacctgcctgacg 522 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 |||||||||||||||||||||| | || || ||||| |||||||| ||||||| | | Sbjct: 521 ttgtcgaagccgatgatacggataaaggcatcggggtaggccttcttggcctcctcgagc 462 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| ||| ||||| |||||||| |||||||| |||||||||||||| |||| Sbjct: 461 tccttgagcac-ctgggtggca-tcggtgcagccgaacatgggcagcttccacatggtcc 404 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 | || | ||| |||||||||||||| || ||||| || ||| ||| ||||||| ||||| Sbjct: 403 aatacctgcca-tcgtagtacccgggaga-cctgtggttctcgcggtagacgaatccaac 346 Query: 467 cttgctgaactcgaggcagggcacccacttgga 499 |||||||||||||||||| |||||||||||||| Sbjct: 345 cttgctgaactcgaggcaaggcacccacttgga 313 Score = 121 bits (61), Expect = 3e-24 Identities = 85/93 (91%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 273 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 214 Query: 601 ctgcatgcacctgatccttccgccattgctgac 633 ||||||| || |||||||||||||||||||||| Sbjct: 213 ctgcatgaacttgatccttccgccattgctgac 181
>gb|AF017363.1|AF017363 Oryza sativa ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 918 Score = 129 bits (65), Expect = 1e-26 Identities = 86/93 (92%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| |||||||| |||||||| Sbjct: 259 ggtgagtggtggcaggtacgatagggtctcgaacttcttgatgccctcaattggccacac 200 Query: 601 ctgcatgcacctgatccttccgccattgctgac 633 |||||||||| |||||||||||||||||||||| Sbjct: 199 ctgcatgcacttgatccttccgccattgctgac 167 Score = 125 bits (63), Expect = 2e-25 Identities = 192/230 (83%), Gaps = 4/230 (1%) Strand = Plus / Minus Query: 270 actgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcgtcagggtactcct 329 |||||||||||| | |||||||||||||||||||||||| | || |||||||| ||| Sbjct: 524 actgcacctgcctgacgttgtcgaagccgatgatacggacaaaggcatcagggtaggcct 465 Query: 330 tcttgacctcctccacctcgttaagcacnctgtgtggcggtcggtgcatccgaacatagg 389 ||||| | || || | || || ||||| ||| ||||| |||||||| |||||||| || Sbjct: 464 tcttggcatcttcgagttccttgagcac-ctgggtggca-tcggtgcagccgaacatggg 407 Query: 390 cagcttccacattgtccagtatcggccngtcgtagtacccgggggagcctgttgtgctca 449 |||||||||||| ||||| || | ||| |||||||| ||||| || ||||| || |||| Sbjct: 406 cagcttccacatggtccaatacctgcca-tcgtagtatccgggaga-cctgtggttctca 349 Query: 450 cggaagacgaagccaaccttgctgaactcgaggcagggcacccacttgga 499 ||| ||||||| |||||||||||||||||||| || |||||||||||||| Sbjct: 348 cggtagacgaacccaaccttgctgaactcgagacaaggcacccacttgga 299
>dbj|AK070257.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023042N11, full insert sequence Length = 845 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||| Sbjct: 261 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctgcatgcat 202 Query: 611 ctgatccttccgccattgctgac 633 ||||||||||||||||||||||| Sbjct: 201 ctgatccttccgccattgctgac 179 Score = 93.7 bits (47), Expect = 7e-16 Identities = 218/270 (80%), Gaps = 4/270 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 579 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 520 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||| ||||| ||||| || ||| | || |||||||| ||||||| ||||||| | | Sbjct: 519 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 460 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct: 459 tccttgagcact-tgggtggc-atcggtgcatccaaacatgggcagtttccacatggtcc 402 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | || ||| ||||| ||||| || |||| | ||||||| ||||||| || || Sbjct: 401 agtacctacc-gtcatagtatccgggtga-tctgtgattctcacggtagacgaatccgac 344 Query: 467 cttgctgaactcgaggcagggcacccactt 496 |||||||||||| | ||| ||||||||||| Sbjct: 343 cttgctgaactccaagcaaggcacccactt 314
>dbj|AK068266.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A10, full insert sequence Length = 1999 Score = 125 bits (63), Expect = 2e-25 Identities = 78/83 (93%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||||||| ||||| |||||||||||||| || |||||||||||||||||||||||||| Sbjct: 263 ggcaagtacgacagagtctcgaacttcttaatgccctcaatcggccacacctgcatgcat 204 Query: 611 ctgatccttccgccattgctgac 633 ||||||||||||||||||||||| Sbjct: 203 ctgatccttccgccattgctgac 181 Score = 93.7 bits (47), Expect = 7e-16 Identities = 218/270 (80%), Gaps = 4/270 (1%) Strand = Plus / Minus Query: 227 gactcctcgcaacccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcagg 286 ||||||||||||||||||||| | | ||||||||||||| |||||||||||| | | Sbjct: 581 gactcctcgcaacccggtggcttatacgcgatgaagctgattaactgcacctgcctaacg 522 Query: 287 ttgtcgaagccgatgatacggacgtaagcgtcagggtactccttcttgacctcctccacc 346 ||||| ||||| ||||| || ||| | || |||||||| ||||||| ||||||| | | Sbjct: 521 ttgtcaaagccaatgatgcgaacgaaggcatcagggtatgccttctttgcctcctcgagc 462 Query: 347 tcgttaagcacnctgtgtggcggtcggtgcatccgaacataggcagcttccacattgtcc 406 || || ||||| || ||||| ||||||||||| ||||| ||||| |||||||| |||| Sbjct: 461 tccttgagcact-tgggtggca-tcggtgcatccaaacatgggcagtttccacatggtcc 404 Query: 407 agtatcggccngtcgtagtacccgggggagcctgttgtgctcacggaagacgaagccaac 466 |||| | || ||| ||||| ||||| || |||| | ||||||| ||||||| || || Sbjct: 403 agtacctacc-gtcatagtatccgggtga-tctgtgattctcacggtagacgaatccgac 346 Query: 467 cttgctgaactcgaggcagggcacccactt 496 |||||||||||| | ||| ||||||||||| Sbjct: 345 cttgctgaactccaagcaaggcacccactt 316
>gb|K02324.1|WHTRBCC Wheat (T. aestivum) chloroplast ribulosebisphosphate carboxylase small subunit mRNA, clone pTS406, 3' end Length = 317 Score = 111 bits (56), Expect = 3e-21 Identities = 65/68 (95%) Strand = Plus / Minus Query: 212 gtttatgccttgccggactcctcgcaacccggtggcctgaaggcgatgaagctgacgcac 271 ||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||| Sbjct: 69 gtttaggccttgccggactcctcgcagcccggtggcttgaaggcgatgaagctgacgcac 10 Query: 272 tgcacctg 279 |||||||| Sbjct: 9 tgcacctg 2
>gb|AY693395.1| Lolium perenne ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, partial cds Length = 195 Score = 109 bits (55), Expect = 1e-20 Identities = 117/135 (86%), Gaps = 2/135 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| |||||||| ||||||||||||||||||||||| | ||| ||||||||| ||||| Sbjct: 188 gtgcagccgaacatgggcagcttccacattgtccagtacctgcc-gtcgtagtatccggg 130 Query: 433 ggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcaccc 492 | || || | ||||||||||| ||||||||||||||||||||| | |||||| |||| Sbjct: 129 agtgc-tgccgaactcacggaagatgaagccaaccttgctgaactccaagcagggaaccc 71 Query: 493 acttggagcggatca 507 | ||||||||||||| Sbjct: 70 atttggagcggatca 56
>emb|X17230.1|LGRBCS5A Lemna gibba rbcS gene SSU5A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 858 Score = 99.6 bits (50), Expect = 1e-17 Identities = 151/181 (83%), Gaps = 3/181 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 597 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 538 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 || || ||||| |||||||| |||||||||||||| | ||| ||| ||||| || Sbjct: 537 aatactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggcg-tc 480 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 479 ggtgcagccgaacatgggcagcttccacatcgtccagta-ccgcccgtcgtagtacccgg 421 Query: 432 g 432 | Sbjct: 420 g 420 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgcacctgatccttccg 622 ||||||||||||||||||| ||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 623 ccattgctg 631 || |||||| Sbjct: 155 ccgttgctg 147
>emb|X00137.1|LGRUBP Lemna gibba ribulose 1.5-bisphospate carboxylase small subunit (cDNA clone pLg ssu1) Length = 776 Score = 93.7 bits (47), Expect = 7e-16 Identities = 197/242 (81%), Gaps = 4/242 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 523 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 464 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 || || ||||| |||||||| |||||||||||||| | ||| ||| |||| ||| Sbjct: 463 aatactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggc-gtc 406 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | || |||||||||||||| Sbjct: 405 ggtgcagccgaacatgggcagcttccacatcgtccagta-cctcccgtcgtagtacccgg 347 Query: 432 gggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacc 491 | || | ||||| ||||||| | ||||| || ||||| |||||||| |||||| ||| Sbjct: 346 gcga-cgcgttgttctcacggtacacgaacccctccttggagaactcgatgcagggaacc 288 Query: 492 ca 493 || Sbjct: 287 ca 286 Score = 48.1 bits (24), Expect = 0.035 Identities = 48/56 (85%) Strand = Plus / Minus Query: 554 aagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgca 609 ||||| || ||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 227 aagtaggagagggtctcgaacttcttcaggccctccggcggccacacctgcatgca 172
>emb|X17231.1|LGRBCS5B Lemna gibba rbcS gene SSU5B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 800 Score = 93.7 bits (47), Expect = 7e-16 Identities = 148/178 (83%), Gaps = 3/178 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 621 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 562 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 || || ||||| |||||||| |||||||||||||| | ||| ||| |||| ||| Sbjct: 561 aatactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggc-gtc 504 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtaccc 429 |||||| |||||||| |||||||||||||| |||||||| | ||| |||||||||||| Sbjct: 503 ggtgcagccgaacatgggcagcttccacatcgtccagta-ccgcccgtcgtagtaccc 447 Score = 58.0 bits (29), Expect = 4e-05 Identities = 59/69 (85%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgcacctgatccttccg 622 ||||||||||||||||||| ||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttgaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 623 ccattgctg 631 || |||||| Sbjct: 155 ccgttgctg 147
>emb|X17235.1|LGRBCS1 Lemna gibba rbcS mRNA SSU1 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 764 Score = 93.7 bits (47), Expect = 7e-16 Identities = 197/242 (81%), Gaps = 4/242 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 508 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 449 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 || || ||||| |||||||| |||||||||||||| | ||| ||| |||| ||| Sbjct: 448 aatactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggc-gtc 391 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | || |||||||||||||| Sbjct: 390 ggtgcagccgaacatgggcagcttccacatcgtccagta-cctcccgtcgtagtacccgg 332 Query: 432 gggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggcacc 491 | || | ||||| ||||||| | ||||| || ||||| |||||||| |||||| ||| Sbjct: 331 gcga-cgcgttgttctcacggtacacgaacccctccttggagaactcgatgcagggaacc 273 Query: 492 ca 493 || Sbjct: 272 ca 271 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgca 609 ||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 203 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 157
>emb|X17234.1|LGRBCS4B Lemna gibba rbcS gene SSU40B for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 91.7 bits (46), Expect = 3e-15 Identities = 150/181 (82%), Gaps = 3/181 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 602 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 543 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 | || ||||| |||||||| |||||||||||||| | ||| ||| ||||| || Sbjct: 542 agtactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggcg-tc 485 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 484 ggtgcagccgaacatgggcagcttccacatcgtccagta-ccgcccgtcgtagtacccgg 426 Query: 432 g 432 | Sbjct: 425 g 425 Score = 50.1 bits (25), Expect = 0.009 Identities = 58/69 (84%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgcacctgatccttccg 622 ||||||||||||||||| | ||||| |||||||||||||||||| || | ||| ||| Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgcagctaaccctgccg 156 Query: 623 ccattgctg 631 || |||||| Sbjct: 155 ccgttgctg 147
>emb|X17233.1|LGRBCS4A Lemna gibba rbcS gene SSU40A for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 791 Score = 91.7 bits (46), Expect = 3e-15 Identities = 150/181 (82%), Gaps = 3/181 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 600 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 541 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 | || ||||| |||||||| |||||||||||||| | ||| ||| ||||| || Sbjct: 540 agtactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggcg-tc 483 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||||||||||||| |||||||| | ||| |||||||||||||| Sbjct: 482 ggtgcagccgaacatgggcagcttccacatcgtccagta-ccgcccgtcgtagtacccgg 424 Query: 432 g 432 | Sbjct: 423 g 423 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgca 609 ||||||||||||||||| | ||||| |||||||||||||||||| Sbjct: 215 agggtctcgaacttcttcaggccctccggcggccacacctgcatgca 169
>gb|M86717.1|SCFBCS1A Saccharum hybrid cultivar H32-8560 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit gene, complete cds Length = 2328 Score = 89.7 bits (45), Expect = 1e-14 Identities = 107/125 (85%), Gaps = 2/125 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 ||||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 1638 gtcggtgcagccgaacatgggcagcttccacatggtccagtaccggcc-gtcgtagtagc 1580 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcagggc 488 |||||| || || ||| ||| | |||||||| ||||||||||||||||||||||| Sbjct: 1579 acggggag-gtggagttctcgcggtacacgaagccttccttgctgaactcgaggcagggc 1521 Query: 489 accca 493 ||||| Sbjct: 1520 accca 1516 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||| |||||||||||| |||||||| Sbjct: 1317 acctgcatgcaccggatccttccgccgttgctgac 1283
>gb|AY023648.1| Oryza sativa microsatellite MRG5973 containing (TTC)X13, closest to marker S10704, genomic sequence Length = 239 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 541 ggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacac 600 |||||| ||||||| ||| || |||||||||||||||||||| ||||||||||||||||| Sbjct: 234 ggtgagcggtggcaggtaggagagggtctcgaacttcttgatgccctcaatcggccacac 175 Query: 601 ct 602 || Sbjct: 174 ct 173 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| |||||||||||||| Sbjct: 73 acctgcatgcacctgatcctgccgccattgctgac 39
>gb|AF008214.1|AF008214 Musa acuminata ribulose-1,5-bisphosphate carboxylase small subunit (rbcS1) mRNA, complete cds Length = 853 Score = 81.8 bits (41), Expect = 3e-12 Identities = 83/97 (85%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| |||||||||||| || |||||||||||||||||| |||| | Sbjct: 591 aggcgatgaaactgatgcactgcacctggcggttgttgtcgaagccgatgatgcggatga 532 Query: 312 aagcgtcagggtactccttcttgacctcctccacctc 348 | |||| ||||||||||||||| |||||||||||| Sbjct: 531 aggcgtgggggtactccttcttgcactcctccacctc 495 Score = 67.9 bits (34), Expect = 4e-08 Identities = 55/61 (90%), Gaps = 1/61 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 ||||||||| |||||||| |||||||||||||| |||||||| | ||| ||||||||||| Sbjct: 476 gtcggtgcacccgaacatgggcagcttccacatggtccagta-ccgcccgtcgtagtacc 418 Query: 429 c 429 | Sbjct: 417 c 417 Score = 54.0 bits (27), Expect = 6e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 560 gacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 ||||||||||| |||||||| | ||||| ||||||||||||| ||||||| Sbjct: 289 gacagggtctcaaacttcttcacgccctcgatcggccacaccttcatgcac 239
>gb|AY267351.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS2) mRNA, complete cds Length = 787 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 440 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 397 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | |||||| || ||||||||||||| Sbjct: 555 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 496 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 495 atgcctgagggtactccttcttg 473
>gb|AF044400.1|AF044400 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2A (rbcS-P2A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 534 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>gb|AF044399.1|AF044399 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1B (rbcS-P1B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 629 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>gb|AF044398.1|AF044398 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P1A (rbcS-P1A) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 608 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 218 Score = 52.0 bits (26), Expect = 0.002 Identities = 65/78 (83%) Strand = Plus / Minus Query: 257 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcg 316 ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| | || Sbjct: 371 atgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatccatgcc 312 Query: 317 tcagggtactccttcttg 334 | |||||||||||||||| Sbjct: 311 tgagggtactccttcttg 294
>gb|AF044396.1|AF044396 Flaveria ramosissima ribulose-1,5-bisphosphate carboxylase small subunit R2 (rbcS-R2) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 574 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 261 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 218
>gb|U29939.1|FPU29939 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS7) mRNA, complete cds Length = 743 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 420 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 377
>gb|U29938.1|FPU29938 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS6) mRNA, complete cds Length = 724 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 405 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 362 Score = 44.1 bits (22), Expect = 0.55 Identities = 64/78 (82%) Strand = Plus / Minus Query: 257 atgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaagcg 316 ||||| |||| ||| ||||| || || | ||||||||| ||||||||||||| | || Sbjct: 515 atgaaactgatgcattgcacttgacggacgttgtcgaatccgatgatacggatccatgcc 456 Query: 317 tcagggtactccttcttg 334 | |||||||||||||||| Sbjct: 455 tgagggtactccttcttg 438
>gb|U29937.1|FPU29937 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS5) mRNA, complete cds Length = 731 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 408 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 365
>gb|U29936.1|FPU29936 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS4) mRNA, complete cds Length = 753 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 437 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 394
>gb|U29935.1|FPU29935 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS3) mRNA, complete cds Length = 746 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 422 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 379
>gb|U29934.1|FPU29934 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS2) mRNA, complete cds Length = 763 Score = 79.8 bits (40), Expect = 1e-11 Identities = 43/44 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 434 gtcggtgcatccgaacataggcaacttccacattgtccagtatc 391 Score = 42.1 bits (21), Expect = 2.2 Identities = 66/81 (81%) Strand = Plus / Minus Query: 254 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgtaa 313 |||||||| |||| |||||| || || || | |||||| || ||||||||||||| | Sbjct: 547 gcgatgaaactgatgcactgaacttgacgaacgttgtcaaatccgatgatacggatccat 488 Query: 314 gcgtcagggtactccttcttg 334 || | |||||||||||||||| Sbjct: 487 gcctgagggtactccttcttg 467
>emb|Y00322.1|ZMRBCS Maize rbcS gene for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (EC 4.1.1.39) Length = 1648 Score = 77.8 bits (39), Expect = 4e-11 Identities = 101/119 (84%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 |||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 1025 gtcgttgcagccgaacatgggcagcttccacatggtccagtagcggcc-gtcgtagtagc 967 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||| || || ||| ||| | |||||||| ||||||||||||||||||||||| Sbjct: 966 acggggag-gtggagttctcgcggtacacgaagccgaccttgctgaactcgaggcaggg 909 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 239 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 298 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 1153 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 1094 Query: 299 atga 302 |||| Sbjct: 1093 atga 1090 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||| |||||||||||| |||||||| Sbjct: 639 acctgcatgcaccggatccttccgccgttgctgac 605
>emb|X06535.1|ZMRUBSSU Maize mRNA for ribulose-1,5-bisphosphate carboxylase small subunit (RuBPC; EC 4.1.1.39) Length = 830 Score = 77.8 bits (39), Expect = 4e-11 Identities = 101/119 (84%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 |||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 440 gtcgttgcagccgaacatgggcagcttccacatggtccagtagcggcc-gtcgtagtagc 382 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||| || || ||| ||| | |||||||| ||||||||||||||||||||||| Sbjct: 381 acggggag-gtggagttctcgcggtacacgaagccgaccttgctgaactcgaggcaggg 324 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||| ||| ||||| ||||||||||||||| | || | ||||||||||||||||||| Sbjct: 262 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 203 Query: 611 ctgatccttccgccattgctgac 633 | |||||||||||| |||||||| Sbjct: 202 cggatccttccgccgttgctgac 180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 239 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 298 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 299 atga 302 |||| Sbjct: 508 atga 505
>dbj|D00170.1|MZEPCSSU Zea mays mRNA for ribulose 1,5-bisphosphate carboxylase small subunit, complete cds Length = 830 Score = 77.8 bits (39), Expect = 4e-11 Identities = 101/119 (84%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 |||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 440 gtcgttgcagccgaacatgggcagcttccacatggtccagtagcggcc-gtcgtagtagc 382 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||| || || ||| ||| | |||||||| ||||||||||||||||||||||| Sbjct: 381 acggggag-gtggagttctcgcggtacacgaagccgaccttgctgaactcgaggcaggg 324 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||| ||| ||||| ||||||||||||||| | || | ||||||||||||||||||| Sbjct: 262 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 203 Query: 611 ctgatccttccgccattgctgac 633 | |||||||||||| |||||||| Sbjct: 202 cggatccttccgccgttgctgac 180 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 239 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 298 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 568 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 509 Query: 299 atga 302 |||| Sbjct: 508 atga 505
>dbj|D00572.1|PYPRBCO Pyrus pyrifolia var. culta mRNA for RuBisCO small subunit, complete cds Length = 844 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 462 gtcggtgcatccgaacatgggcagcttccacattgtccagta 421 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 254 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 575 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 521 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 |||||| ||||||||||||||||| Sbjct: 276 gtaagagagggtctcgaacttctt 253
>emb|X17232.1|LGRBCS26 Lemna gibba rbcS gene SSU26 for small subunit of ribulose bisphosphate carboxylase (EC 4.1.1.39) Length = 936 Score = 75.8 bits (38), Expect = 2e-10 Identities = 148/181 (81%), Gaps = 3/181 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||| |||||| || || ||| |||||||||||||||||| | |||| Sbjct: 578 aggcgatgaagctgatgcactggacttggcgcttgttgtcgaagccgatgattctgacga 519 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 | || ||||| |||||||| |||||||||||||| | ||| ||| ||||| || Sbjct: 518 agtactcggggtaggccttcttggcctcctccacctcggcgatcac-ctggctggcg-tc 461 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgg 431 |||||| |||||||| |||| ||||||||| |||||||| | || |||||||||||||| Sbjct: 460 ggtgcagccgaacatgggcaacttccacatcgtccagtacct-cccgtcgtagtacccgg 402 Query: 432 g 432 | Sbjct: 401 g 401 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgca 609 |||||||| |||||||||| ||||| |||||||||||||||||| Sbjct: 215 agggtctcaaacttcttgaggccctccggcggccacacctgcatgca 169
>emb|X65494.1|MSCARB Malus (unidentified species of crab apple) mRNA for rubisco-1,5-bisphosphate carboxylase Length = 853 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 466 gtcggtgcatccgaacatgggcagcttccacattgtccagta 425 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 254 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 579 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 525 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 |||||| ||||||||||||||||| Sbjct: 280 gtaagagagggtctcgaacttctt 257
>gb|L24497.1|PYPRBCS Pyrus malus X domestica ribulose-1,5-bisphosphate carboxylase small subunit (rbcS) mRNA, complete cds Length = 813 Score = 75.8 bits (38), Expect = 2e-10 Identities = 41/42 (97%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||||||||| ||||||||||||||||||||||| Sbjct: 430 gtcggtgcatccgaacatgggcagcttccacattgtccagta 389 Score = 46.1 bits (23), Expect = 0.14 Identities = 47/55 (85%) Strand = Plus / Minus Query: 254 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 |||||||| |||| ||||||||| || || | |||||||| ||||||||||||| Sbjct: 543 gcgatgaaactgatgcactgcacttgacggacattgtcgaatccgatgatacgga 489 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 |||||| ||||||||||||||||| Sbjct: 244 gtaagagagggtctcgaacttctt 221
>gb|AF034479.1| Zantedeschia aethiopica ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 968 Score = 73.8 bits (37), Expect = 6e-10 Identities = 67/77 (87%) Strand = Plus / Minus Query: 535 ctccgtggtgaggggtggcaagtaagacagggtctcgaacttcttgataccctcaatcgg 594 |||| ||||||| ||||||| ||| |||||||||||||||||||| | ||||| ||| Sbjct: 280 ctccctggtgagtggtggcaggtaggacagggtctcgaacttcttcttgccctccggcgg 221 Query: 595 ccacacctgcatgcacc 611 ||||||||||||||||| Sbjct: 220 ccacacctgcatgcacc 204 Score = 63.9 bits (32), Expect = 6e-07 Identities = 59/67 (88%), Gaps = 1/67 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 ||||||||| |||||||| |||| ||||||||| |||||||| || || ||||||||||| Sbjct: 442 gtcggtgcacccgaacatgggcaacttccacatggtccagtagcg-cccgtcgtagtacc 384 Query: 429 cggggga 435 | ||||| Sbjct: 383 ccgggga 377 Score = 50.1 bits (25), Expect = 0.009 Identities = 40/45 (88%) Strand = Plus / Minus Query: 259 gaagctgacgcactgcacctgccgcaggttgtcgaagccgatgat 303 |||||||| ||||||||| || ||| |||||||||||||||||| Sbjct: 550 gaagctgatgcactgcacttggcgcgtgttgtcgaagccgatgat 506
>gb|AY267350.1| Flaveria bidentis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (RbcS1) mRNA, complete cds Length = 735 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 |||||||||||| |||||||||| |||||||||||||||||||| Sbjct: 416 gtcggtgcatccaaacataggcaacttccacattgtccagtatc 373 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 531 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 472 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 471 atgcctgagggtactccttcttg 449
>emb|AJ843972.1| Plantago major mRNA for Rubisco SSU (rbcs1 gene) Length = 806 Score = 71.9 bits (36), Expect = 2e-09 Identities = 77/88 (87%), Gaps = 2/88 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| |||||||| |||| |||||||||||||||||| || || ||| ||||| ||||| Sbjct: 438 gtgcaaccgaacatgggcaacttccacattgtccagtagcgtcc-gtcatagtatccggg 380 Query: 433 ggagcctgttgtgctcacggaagacgaa 460 ||| |||||||| ||||||| ||||||| Sbjct: 379 gga-cctgttgttctcacggtagacgaa 353
>gb|AF044401.1|AF044401 Flaveria palmeri ribulose-1,5-bisphosphate carboxylase small subunit P2B (rbcS-P2B) mRNA, nuclear gene encoding chloroplast protein, partial cds Length = 532 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 261 gtcggtgcatccgaacataggcaacttccacatcgtccagtatc 218 Score = 54.0 bits (27), Expect = 6e-04 Identities = 69/83 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 376 aggcaatgaaactgacgcattgcacttgacgaacgttgtcgaatccgatgatacggatcc 317 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 316 atgcctgagggtactccttcttg 294
>emb|X05037.1|FTRBCR Flaveria trinervia mRNA for ribulose 1,5-biphosphate carboxylase Length = 752 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| ||||||||| |||||||||| Sbjct: 412 gtcggtgcatccgaacataggcaacttccacatcgtccagtatc 369 Score = 46.1 bits (23), Expect = 0.14 Identities = 68/83 (81%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||| ||||| |||||||| ||||| || || | |||||| || ||||||||||||| Sbjct: 527 aggcaatgaaactgacgcattgcacttgacggacgttgtcaaatccgatgatacggatcc 468 Query: 312 aagcgtcagggtactccttcttg 334 | || | |||||||||||||||| Sbjct: 467 atgcctgagggtactccttcttg 445
>emb|AJ428877.1|ROB428877 Rumex obtusifolius mRNA for putative ribulose 1,5 biphosphate carboxylase small subunit percursor (rbcs gene) Length = 686 Score = 71.9 bits (36), Expect = 2e-09 Identities = 130/159 (81%), Gaps = 2/159 (1%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 ||||||||||||||||||||||||| || || | ||||||||| ||||| || |||||| Sbjct: 574 aggcgatgaagctgacgcactgcacttgacggacgttgtcgaatccgataatgcggacga 515 Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 |||| | ||||| ||||||| ||||||| | |||| | || ||| ||||| ||| Sbjct: 514 aagcatgtgggtaagccttcttagcctcctcgagctcggcga-caacctgggtggc-gtc 457 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagta 410 ||||| |||||||| |||||||||||||| |||||||| Sbjct: 456 agtgcacccgaacatgggcagcttccacatggtccagta 418
>gb|AF162195.1|AF162195 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit precursor, mRNA, complete cds Length = 956 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 449 gtgcatccgaacataggcaacttccacattgtccagtatc 410 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || |||||||||| |||||||||||||||||| Sbjct: 937 gtgcacccaaacataggcaacttccacattgtccagta 900
>gb|U29933.1|FPU29933 Flaveria pringlei ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit protein (rbcS1) mRNA, complete cds Length = 743 Score = 71.9 bits (36), Expect = 2e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 419 gtcggtgcatccgaacataggcaatttccacattgtccagtatc 376
>dbj|D14001.1|LAURBCS Lettuce mRNA for riburose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 758 Score = 71.9 bits (36), Expect = 2e-09 Identities = 39/40 (97%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||||| |||||||||||||||||||| Sbjct: 441 gtgcatccgaacataggcaacttccacattgtccagtatc 402
>emb|Y09214.1|ZMRUBSMSU Z.mays rubisco small subunit gene Length = 1274 Score = 69.9 bits (35), Expect = 1e-08 Identities = 100/119 (84%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 ||||||||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 688 gtcggtgcagccgaacatgggcagcttccacatggtccagtagcggcc-gtcgtagtagc 630 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||| || || ||| ||| | ||||| || | ||||||||||||||||||||| Sbjct: 629 acggggag-gtggagttctcgcggtacacgaacccgagcttgctgaactcgaggcaggg 572 Score = 61.9 bits (31), Expect = 2e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatga 302 ||||||||||||||||||||||| ||||| | ||||||||||||||||| Sbjct: 803 aggcgatgaagctgacgcactgcgtctgcctgacgttgtcgaagccgatga 753 Score = 54.0 bits (27), Expect = 6e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 ||||||||||||| |||||||||||| |||||||| Sbjct: 344 acctgcatgcaccggatccttccgccgttgctgac 310
>gb|AY103730.1| Zea mays PCO095823 mRNA sequence Length = 1172 Score = 69.9 bits (35), Expect = 1e-08 Identities = 71/83 (85%) Strand = Plus / Minus Query: 551 ggcaagtaagacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||| ||| ||||| ||||||||||||||| | || | ||||||||||||||||||| Sbjct: 382 ggcaggtacgacagcgtctcgaacttcttgttgccgtaggccggccacacctgcatgcac 323 Query: 611 ctgatccttccgccattgctgac 633 | |||||||||||| |||||||| Sbjct: 322 cggatccttccgccgttgctgac 300 Score = 61.9 bits (31), Expect = 2e-06 Identities = 99/119 (83%), Gaps = 2/119 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 |||| |||| |||||||| |||||||||||||| |||||||| ||||| ||||||||| | Sbjct: 560 gtcgttgcagccgaacatgggcagcttccacatggtccagtagcggcc-gtcgtagtagc 502 Query: 429 cgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||| || || ||| ||| | ||||| || | ||||||||||||||||||||| Sbjct: 501 acggggag-gtggagttctcgcggtacacgaacccgagcttgctgaactcgaggcaggg 444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 239 cccggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccg 298 ||||| ||| || ||||||||||||||||||||||| |||| | ||||||||||||| Sbjct: 688 cccgggggcttgtaggcgatgaagctgacgcactgcgtctgcttgatgttgtcgaagccg 629 Query: 299 atga 302 |||| Sbjct: 628 atga 625
>gb|M38316.1|CIPRBCS2 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-2) mRNA, complete cds Length = 680 Score = 69.9 bits (35), Expect = 1e-08 Identities = 77/91 (84%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| |||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 551 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacggatga 492 Query: 312 aagcgtcagggtactccttcttgacctcctc 342 | || |||||||| |||||||| ||||||| Sbjct: 491 aggcctcagggtaagccttcttggcctcctc 461 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 437 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 395 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 ||||||||| |||||||||||||| Sbjct: 250 gtaagacagagtctcgaacttctt 227
>ref|NM_123203.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38420 mRNA, complete cds Length = 837 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 409
>gb|AY163904.1| Chrysanthemum x morifolium ribulose-1,5-bisphosphate carboxylase small subunit gene, complete cds; nuclear gene for chloroplast product Length = 2662 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 374 tgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccgggg 433 |||| |||||||| |||| |||||||||||||||||||| ||| |||||||| |||||| Sbjct: 1578 tgcacccgaacatgggcaacttccacattgtccagtatctgcca-tcgtagtatccgggg 1520 Query: 434 gagc 437 |||| Sbjct: 1519 gagc 1516 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 gttgtcgaagccgatgatacggac 309 ||||||||| |||||||||||||| Sbjct: 1664 gttgtcgaatccgatgatacggac 1641
>emb|AJ843975.1| Plantago major mRNA for Rubisco SSU (rbcs1a gene) Length = 761 Score = 65.9 bits (33), Expect = 2e-07 Identities = 39/41 (95%) Strand = Plus / Minus Query: 370 tcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 434 tcggtgcatccgaacatgggtagcttccacattgtccagta 394 Score = 46.1 bits (23), Expect = 0.14 Identities = 83/103 (80%) Strand = Plus / Minus Query: 242 ggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatg 301 |||||| || |||| ||||| |||| |||||| || || || | |||||||||||||||| Sbjct: 560 ggtggcttggaggcaatgaaactgatgcactggacttggcgaacgttgtcgaagccgatg 501 Query: 302 atacggacgtaagcgtcagggtactccttcttgacctcctcca 344 || | ||| | |||| ||||| ||||||||| |||||||| Sbjct: 500 atcctgacccaggcgttggggtattccttcttgcactcctcca 458
>gb|AY093288.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 586 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 358
>gb|AY062543.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 721 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 405
>gb|AY062458.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 720 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 405
>gb|AY062437.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 728 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 409
>gb|AY059939.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420; MXI10.14) mRNA, complete cds Length = 758 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 449 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 405
>dbj|AB004883.1| Marchantia paleacea var. diptera mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 931 Score = 65.9 bits (33), Expect = 2e-07 Identities = 57/64 (89%), Gaps = 1/64 (1%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacc 428 ||||||||| |||||||| |||| ||||||||| |||||||||||||| |||||||| | Sbjct: 463 gtcggtgcacccgaacatgggcaacttccacatggtccagtatcggcca-tcgtagtatc 405 Query: 429 cggg 432 |||| Sbjct: 404 cggg 401
>emb|BX841713.1|CNS09YLJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL40ZH10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 752 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 441 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 397
>gb|AF303941.1|AF303941 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS3 mRNA, complete cds Length = 772 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/80 (86%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtcca-tcgtagtatcctgg 374 Query: 433 ggagcctgttgtgctcacgg 452 || |||||||||||||||| Sbjct: 373 tga-cctgttgtgctcacgg 355
>gb|AF303940.1|AF303940 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS2 mRNA, complete cds Length = 830 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/80 (86%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtcca-tcgtagtatcctgg 374 Query: 433 ggagcctgttgtgctcacgg 452 || |||||||||||||||| Sbjct: 373 tga-cctgttgtgctcacgg 355
>gb|AF303939.1|AF303939 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit rbcS1 mRNA, complete cds Length = 750 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 551 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 495 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/80 (86%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 432 gtgcaaccaaacataggcagcttccacatggtccagtagcgtcca-tcgtagtatcctgg 374 Query: 433 ggagcctgttgtgctcacgg 452 || |||||||||||||||| Sbjct: 373 tga-cctgttgtgctcacgg 355
>gb|BT003356.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 587 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 358
>gb|U39567.1|GMU39567 Glycine max ribulose-1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 765 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 548 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 492 Score = 58.0 bits (29), Expect = 4e-05 Identities = 69/80 (86%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| || |||||||||||||||||||| |||||||| || || |||||||| || || Sbjct: 429 gtgcaaccaaacataggcagcttccacatggtccagtagcgtcca-tcgtagtatcctgg 371 Query: 433 ggagcctgttgtgctcacgg 452 || |||||||||||||||| Sbjct: 370 tga-cctgttgtgctcacgg 352
>gb|BT002554.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 586 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 358
>dbj|AB005248.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MXI10 Length = 83646 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Plus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 54479 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 54523 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 57626 gtcggtgcatccgaacaatggaagcttccacattgtccagta 57667 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 50777 gtcggtgcatccgaacaatggaagcttccacattgtccagta 50818
>gb|BT002094.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 2b precursor (RuBisCO small subunit 2b) (At5g38420) mRNA, complete cds Length = 586 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 358
>gb|DQ286548.1| Pyrus pyrifolia ribulose-1,5-bisphosphate carboxylase small subunit-like gene, complete sequence; plastid Length = 549 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 254 gcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacg 310 ||||||||||||| ||||||||| || || | ||||||||| ||||||||||||||| Sbjct: 523 gcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacggacg 467 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||| ||||| || |||||||||||||||||||| Sbjct: 410 gtcggtgcatccaaacatgggaagcttccacattgtccagta 369
>gb|U39857.1|GTU39857 Glycine tomentella ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1069 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1048 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 992 Score = 44.1 bits (22), Expect = 0.55 Identities = 34/38 (89%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || |||| ||||||||||||||| |||||||| Sbjct: 929 gtgcagccaaacacaggcagcttccacatggtccagta 892
>gb|U39856.1|GSU39856 Glycine soja ribulose 1,5-bisphosphate carboxylase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1089 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1068 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1012 Score = 50.1 bits (25), Expect = 0.009 Identities = 68/80 (85%), Gaps = 2/80 (2%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||| || |||||||||||||||||||| |||||| | || || |||||||| || || Sbjct: 949 gtgcaaccaaacataggcagcttccacatggtccagcagcgtcca-tcgtagtatcctgg 891 Query: 433 ggagcctgttgtgctcacgg 452 || |||||||||||||||| Sbjct: 890 tga-cctgttgtgctcacgg 872
>emb|X14564.1|ATATSGS A.thaliana ats1B, ats2B and ats3B gene for ribulose-1,5-biphosphate carboxylase small subunit (rbcS) (EC 4.1.1.39) Length = 9647 Score = 65.9 bits (33), Expect = 2e-07 Identities = 42/45 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatcg 413 ||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 5404 gtcggtgcatccgaacaatggaagcttccacattgtccagtatcg 5360 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 9103 gtcggtgcatccgaacaatggaagcttccacattgtccagta 9062 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 2256 gtcggtgcatccgaacaatggaagcttccacattgtccagta 2215
>gb|M16889.1|SOYRUBPA Soybean ribulose 1,5-bisphosphate carboxylase small subunit (SRS4) gene, complete cds Length = 2185 Score = 65.9 bits (33), Expect = 2e-07 Identities = 51/57 (89%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | ||||||||| ||||||||||||| Sbjct: 1719 aggcgatgaagctgatgcactgcacttggcgaacgttgtcgaatccgatgatacgga 1663 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || |||||||||||||||||||| |||||||| Sbjct: 1600 gtgcaaccaaacataggcagcttccacatggtccagta 1563
>emb|X02353.1|NTRUBSS Tobacco gene for ribulose 1,5-bisphosphate carboxylase small subunit Length = 2362 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 1845 gtgcatccgaacataggtagcttccacatggtccagtatc 1806
>emb|X01722.1|NSRUB1 Nicotiana silvestris mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 796 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 464 gtgcatccgaacataggtagcttccacatggtccagtatc 425
>dbj|AB240146.1| Chlorella pyrenoidosa rbcS mRNA for RuBisCO small subunits, partial cds Length = 375 Score = 63.9 bits (32), Expect = 6e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 363 gtggcggtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||| ||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 213 gtggccgtcggtgcagccgaacatgggcagcttccacatggtccagta 166
>emb|AJ538400.1|NTA538400 Nicotiana tabacum cDNA-AFLP-fragment BC1-M23-013 Length = 263 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Plus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 51 gtgcatccgaacataggtagcttccacatggtccagtatc 90
>emb|Y00431.1|HARBCS Sunflower rbcS gene for RuBP carboxylase small subunit (EC 4.1.1.39) (RuBP carboxylase=ribulose 1.5-bisphosphate carboxylase/oxygenase) Length = 1400 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 1167 gtcggtgcaaccgaacataggcaatttccacattgtccagtatc 1124
>emb|X05079.1|HARUBISC Sunflower mRNA for ribulose 1,5-bisphosphate carboxylase RuBisCO SSU (E.C. 4.1.1.39) Length = 674 Score = 63.9 bits (32), Expect = 6e-07 Identities = 41/44 (93%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||| ||||||||||||| ||||||||||||||||||| Sbjct: 423 gtcggtgcaaccgaacataggcaatttccacattgtccagtatc 380
>gb|J01308.1|TOBRBPC Nicotiana sylvestris ribulose-1,5-bisphosphate carboxylase small subunit mRNA Length = 453 Score = 63.9 bits (32), Expect = 6e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||||||||||||||| ||||||||||| |||||||||| Sbjct: 122 gtgcatccgaacataggtagcttccacatggtccagtatc 83
>emb|X07367.1|BNRBCSSU B.napus mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit Length = 726 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 429 gtgcatccgaacaagggaagcttccacattgtccagtaacggcca-tcgtagtatccggg 371 Query: 433 gg 434 || Sbjct: 370 gg 369
>emb|X55937.1|BNRBCSF1 Brassica napus rbcSF1 gene for ribulose-1,5-biphosphate carboxylase/oxygenase small subunit Length = 2006 Score = 61.9 bits (31), Expect = 2e-06 Identities = 55/62 (88%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||||||||||| || |||||||||||||||||||| ||||| |||||||| ||||| Sbjct: 1386 gtgcatccgaacaagggaagcttccacattgtccagtaacggcca-tcgtagtatccggg 1328 Query: 433 gg 434 || Sbjct: 1327 gg 1326
>gb|AF039014.1|AF039014 Fritillaria agrestis clone TA8 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagtatcg 413 |||||||| |||||||||||||||||||||||||| Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcg 502
>gb|AF039011.1|AF039011 Fritillaria agrestis clone TA22 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 591 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagtatcg 413 |||||||| |||||||||||||||||||||||||| Sbjct: 535 ccgaacatgggcagcttccacattgtccagtatcg 501
>gb|AF039008.1|AF039008 Fritillaria agrestis clone TA15 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 592 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagtatcg 413 |||||||| |||||||||||||||||||||||||| Sbjct: 536 ccgaacatgggcagcttccacattgtccagtatcg 502
>gb|L10215.1|CIP345RSS Mesembryanthemum crystallinum (clones: rbcs-3 and -4) rubisco small subunit genes, complete cds, (clone: rbcs-5) rubisco small submnit gene, partial cds Length = 8682 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 1334 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 1275 Query: 312 aagcgtcagggtactccttcttgacctcctc 342 | || |||||||| |||||||| ||||||| Sbjct: 1274 aggcctcagggtaagccttcttggcctcctc 1244 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 7568 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 7526 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 3586 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 3544 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 1220 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 1178 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 ||||||||| |||||||||||||| Sbjct: 918 gtaagacagagtctcgaacttctt 895
>gb|L10214.1|CIP2RSS Mesembryanthemum crystallinum (clone: rbcs-2) rubisco small subunit gene, complete cds Length = 2671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| |||||| || || |||| ||||||||| |||||||||||| | Sbjct: 2033 aggcgatgaaactgatgcactgtacttgacgcacgttgtcgaatccgatgatacgggtga 1974 Query: 312 aagcgtcagggtactccttcttgacctcctc 342 | || |||||||| |||||||| ||||||| Sbjct: 1973 aggcctcagggtaagccttcttggcctcctc 1943 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 1919 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 1877 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 ||||||||| |||||||||||||| Sbjct: 1522 gtaagacagagtctcgaacttctt 1499
>gb|L10212.1|CIP1RSS Mesembryanthemum crystallinum (clone: rbcs-1) rubisco small subunit gene, complete cds Length = 3552 Score = 61.9 bits (31), Expect = 2e-06 Identities = 76/91 (83%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 2520 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 2461 Query: 312 aagcgtcagggtactccttcttgacctcctc 342 | || |||||||| |||||||| ||||||| Sbjct: 2460 aggcctcagggtaagccttcttggcctcctc 2430 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 2406 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 2364
>dbj|AB067656.1| Oryza sativa (japonica cultivar-group) OsrbcS gene for small subunit of ribulose-1,5-bisphosphate carboxylase, promoter region and partial cds Length = 1815 Score = 61.9 bits (31), Expect = 2e-06 Identities = 34/35 (97%) Strand = Plus / Minus Query: 599 acctgcatgcacctgatccttccgccattgctgac 633 |||||||||||||||||||| |||||||||||||| Sbjct: 1699 acctgcatgcacctgatcctgccgccattgctgac 1665
>ref|NM_123204.3| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38430 mRNA, complete cds Length = 808 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 431 gtcggtgcatccgaacaatggaagcttccacattgtccagta 390
>ref|NM_123202.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.1 mRNA, complete cds Length = 925 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagta 412
>ref|NM_001036904.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT5G38410 transcript variant AT5G38410.2 mRNA, complete cds Length = 963 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 491 gtcggtgcatccgaacaatggaagcttccacattgtccagta 450
>gb|AY143814.1| Arabidopsis thaliana At5g38430/F1O19.10 mRNA, complete cds Length = 546 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagta 361
>gb|BT000721.1| Arabidopsis thaliana clone RAFL04-15-J15 (R09791) putative ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410) mRNA, complete cds Length = 772 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 454 gtcggtgcatccgaacaatggaagcttccacattgtccagta 413
>gb|AY142543.1| Arabidopsis thaliana clone RAFL04-14-I04 (R09825) mRNA sequence Length = 2116 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 1807 gtcggtgcatccgaacaatggaagcttccacattgtccagta 1766
>gb|AY051025.1| Arabidopsis thaliana putative RuBisCO small 3b subunit precursor (At5g38410) mRNA, complete cds Length = 577 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagta 361
>gb|AF360124.1| Arabidopsis thaliana putative ribulose bisphosphate carboxylase small chain 3b precursor (At5g38410) mRNA, complete cds Length = 720 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagta 412
>gb|AY098970.1| Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 546 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagta 361
>dbj|AB236868.1| Panax ginseng mRNA for ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit, complete cds Length = 790 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 |||||||| ||||| ||||||||||||||||||||||| Sbjct: 447 gtgcatccaaacatgggcagcttccacattgtccagta 410 Score = 50.1 bits (25), Expect = 0.009 Identities = 76/93 (81%) Strand = Plus / Minus Query: 242 ggtggcctgaaggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatg 301 |||||| ||||||| ||||| |||| ||||||||| || || | ||||||||| || || Sbjct: 576 ggtggcttgaaggcaatgaaactgatgcactgcacttgacggacgttgtcgaatccaata 517 Query: 302 atacggacgtaagcgtcagggtactccttcttg 334 || |||| ||| || | ||||||||||||||| Sbjct: 516 attcggatgtatgcatttgggtactccttcttg 484 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 ||||||||| |||||||||||||| Sbjct: 265 gtaagacagagtctcgaacttctt 242
>gb|AF462822.1|AF462822 Arabidopsis thaliana At5g38410/F1O19.10 mRNA, complete cds Length = 764 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagta 412
>gb|AY065026.1| Arabidopsis thaliana AT5g53140/MFH8_8 mRNA, complete cds Length = 2204 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 77 gtcggtgcatccgaacaatggaagcttccacattgtccagta 36
>gb|AY064686.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 595 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 402 gtcggtgcatccgaacaatggaagcttccacattgtccagta 361
>gb|AY054552.1| Arabidopsis thaliana ribulose bisphosphate carboxylase small chain 3b precursor (RuBisCO small subunit 3b) (At5g38410; MXI10.13) mRNA, complete cds Length = 772 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 445 gtcggtgcatccgaacaatggaagcttccacattgtccagta 404
>gb|AF410314.1|AF410314 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 728 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 453 gtcggtgcatccgaacaatggaagcttccacattgtccagta 412
>gb|AF410283.1|AF410283 Arabidopsis thaliana F1O19.10/F1O19.10 mRNA, complete cds Length = 652 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 428 gtcggtgcatccgaacaatggaagcttccacattgtccagta 387
>emb|BX833384.1|CNS0A1LA Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL51ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 703 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 429 gtcggtgcatccgaacaatggaagcttccacattgtccagta 388
>emb|BX830381.1|CNS0A1HW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZB07 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 717 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 411 gtcggtgcatccgaacaatggaagcttccacattgtccagta 370
>emb|BX830099.1|CNS0A1FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB59ZG04 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 372 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 135 gtcggtgcatccgaacaatggaagcttccacattgtccagta 94
>emb|BX832776.1|CNS0A0L8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL10ZE03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 715 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 441 gtcggtgcatccgaacaatggaagcttccacattgtccagta 400
>emb|BX831203.1|CNS0A0SX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS68ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 706 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 430 gtcggtgcatccgaacaatggaagcttccacattgtccagta 389
>emb|BX833789.1|CNS0A0DD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL77ZC03 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 700 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 424 gtcggtgcatccgaacaatggaagcttccacattgtccagta 383
>emb|BX833660.1|CNS0A0FN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL69ZD11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 716 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 440 gtcggtgcatccgaacaatggaagcttccacattgtccagta 399
>emb|BX832874.1|CNS0A0CD Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL19ZB09 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 709 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 435 gtcggtgcatccgaacaatggaagcttccacattgtccagta 394
>gb|BT005730.1| Arabidopsis thaliana clone RAFL15-16-B15 (R20676) Length = 1794 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| || |||||||||||||||||||| Sbjct: 448 gtcggtgcatccgaacaatggaagcttccacattgtccagta 407
>emb|X13711.1|NPRBCS8B Nicotiana plumbaginifolia rbcS-8B gene for ribulose bisphosphate carboxylase small subunit Length = 2293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1853 gtgcatccgaacataggtagcttccacatggtccagta 1816
>emb|X54464.1|LLRBC5CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC5C) Length = 678 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtaccc 429 ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 379 gtgcatccgaacataggcagcttccacatcacccagtatc-tcccgtcgtagtaccc 324
>emb|X54462.1|LLRBC3CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC3C) Length = 663 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtaccc 429 ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 452 gtgcatccgaacataggcagcttccacatcacccagtatc-tcccgtcgtagtaccc 397
>emb|X16039.1|LLRBCS Larix laricina rbcS gene for ribulose-1,5-carboxylase/oxygenase (EC 4.1.1.39) Length = 3679 Score = 60.0 bits (30), Expect = 9e-06 Identities = 51/57 (89%), Gaps = 1/57 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtaccc 429 ||||||||||||||||||||||||||||| |||||||| || |||||||||||| Sbjct: 2248 gtgcatccgaacataggcagcttccacatcacccagtatc-tcccgtcgtagtaccc 2193
>gb|AF162210.1|AF162210 Lactuca sativa ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; nuclear gene for chloroplast product Length = 835 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| ||||||||||||| |||||||||||||||||| Sbjct: 474 gtgcacccgaacataggcaacttccacattgtccagta 437
>gb|M16888.1|SIPRUBPCS White campion ribulose bisphosphate carboxylase small subunit (RuBPC) mRNA, complete cds Length = 692 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||||| || |||||||||||||||||||| Sbjct: 402 gtgcatccgaacatgggtagcttccacattgtccagta 365
>gb|M36685.1|TOBRBCS8B N.plumbaginifolia ribulose bisphosphate carboxylase (rbcS-8B) gene, complete cds Length = 2293 Score = 60.0 bits (30), Expect = 9e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||||||| ||||||||||| |||||||| Sbjct: 1853 gtgcatccgaacataggtagcttccacatggtccagta 1816
>dbj|AB026685.1| Physcomitrella patens mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit, partial cds Length = 818 Score = 60.0 bits (30), Expect = 9e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| |||||||| |||||||||||||| |||||||| Sbjct: 518 gtcggtgcacccgaacatgggcagcttccacatggtccagta 477
>gb|DQ418485.1| Zingiber officinale ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; chloroplast Length = 367 Score = 58.0 bits (29), Expect = 4e-05 Identities = 44/49 (89%) Strand = Plus / Minus Query: 563 agggtctcgaacttcttgataccctcaatcggccacacctgcatgcacc 611 ||||| ||||||||||| | ||||| |||||||||||||||||||||| Sbjct: 220 agggtttcgaacttcttcttcccctcgatcggccacacctgcatgcacc 172
>emb|X03821.1|PERBCS11 Petunia x hybrida rbcS gene (ssu11A) for ribulose 1,5-bisphosphate carboxylase small subunit Length = 1314 Score = 58.0 bits (29), Expect = 4e-05 Identities = 38/41 (92%) Strand = Plus / Minus Query: 370 tcggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||| |||||||| |||||||||||||| |||||||| Sbjct: 1052 tcggtgcacccgaacatgggcagcttccacatggtccagta 1012
>emb|X54465.1|LLRBC7CM L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC7C) Length = 263 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacat 401 ||||||||||||||||||||||||||||| Sbjct: 48 gtgcatccgaacataggcagcttccacat 20
>emb|X54460.1|LLRBC1C L.laricina mRNA for ribulose bisphosphate carboxylase (LLRBC1C) Length = 117 Score = 58.0 bits (29), Expect = 4e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacat 401 ||||||||||||||||||||||||||||| Sbjct: 50 gtgcatccgaacataggcagcttccacat 22
>gb|U39858.1|GTU39858 Glycine tabacina ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit precursor (rbcS) gene, nuclear gene encoding chloroplast protein, complete cds Length = 1084 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||| ||||| || || | ||||||||| ||||||||||||| Sbjct: 1063 aggcgatgaagctgatgcattgcacttggcgaacgttgtcgaatccgatgatacgga 1007 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || |||||||||||||||||||| |||||||| Sbjct: 944 gtgcagccaaacataggcagcttccacatggtccagta 907
>gb|L10213.1|CIP6RSS Mesembryanthemum crystallinum (clone: rbcs-6) rubisco small subunit gene, complete cds Length = 3024 Score = 58.0 bits (29), Expect = 4e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 |||||||||| ||||| || ||||| || |||| ||||||||| ||||||||||||| Sbjct: 2640 aggcgatgaaactgacacattgcacttgacgcacgttgtcgaatccgatgatacgga 2584 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| |||||||| |||| |||||||||||||||||| Sbjct: 2521 gtgcaaccgaacatgggcaacttccacattgtccagta 2484
>gb|AF493617.1| Acetabularia acetabulum ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS) mRNA, partial cds; chloroplast gene for chloroplast product Length = 411 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 |||||||| |||||||| ||||||||||||||||| |||| Sbjct: 211 gtgcatccaaacataggtagcttccacattgtccaatatc 172
>gb|L76557.1|SPIRBCS Spinacia oleracea chloroplast ribulose 1,5-bisphosphate carboxylase small subunit mRNA, complete cds Length = 756 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtac 427 |||| ||||| |||||||| |||| |||||||||||||||||| || || ||| |||||| Sbjct: 440 ggtcagtgcacccgaacatgggcaacttccacattgtccagtaacgacc-gtcatagtac 382 Query: 428 ccggggga 435 || ||||| Sbjct: 381 cctgggga 374
>emb|X51814.1|AMRBCSM4 Acetabularia mediterranea mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase, small subunit (rbcS gene), clone M4 Length = 741 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 |||||||| |||||||| ||||||||||||||||| |||| Sbjct: 420 gtgcatccaaacataggtagcttccacattgtccaatatc 381
>emb|X97600.1|SORBCS2 S.oleracea mRNA for ribulose-1,5-bisphosphate carboxylase Length = 751 Score = 56.0 bits (28), Expect = 1e-04 Identities = 59/68 (86%), Gaps = 1/68 (1%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtac 427 |||| ||||| |||||||| |||| |||||||||||||||||| || || ||| |||||| Sbjct: 438 ggtcagtgcacccgaacatgggcaacttccacattgtccagtaacgacc-gtcatagtac 380 Query: 428 ccggggga 435 || ||||| Sbjct: 379 cctgggga 372
>gb|AF039015.1|AF039015 Fritillaria agrestis clone TA1 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagta 508
>gb|AF039013.1|AF039013 Fritillaria agrestis clone TA26 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagta 508
>gb|AF039010.1|AF039010 Fritillaria agrestis clone TA24 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagta 508
>gb|AF039009.1|AF039009 Fritillaria agrestis clone TA23 ribulose 1,5 bisphosphate carboxylase small subunit (rbcS) gene, partial cds Length = 595 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 539 ccgaacatgggcagcttccacattgtccagta 508
>gb|AF031543.1|AF031543 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase small subunit type IV (rbcS4) mRNA, complete cds Length = 732 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 414 ccgaacatcggcagcttccacattgtccagta 383
>gb|AF024574.1|AF024574 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type III (rbcS3) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 798 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 419 ccgaacatgggcagcttccacattgtccagta 388
>gb|AF024572.1|AF024572 Fritillaria agrestis ribulose 1,5 bisphosphate carboxylase, small subunit type I (rbcS1) mRNA, nuclear gene encoding chloroplast protein, complete cds Length = 713 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 379 ccgaacataggcagcttccacattgtccagta 410 |||||||| ||||||||||||||||||||||| Sbjct: 413 ccgaacatcggcagcttccacattgtccagta 382
>gb|L26605.1|SLARBCS Stellaria longipes ribulose-1,5-bisphosphate carboxylase/oxygenase (rbcS) mRNA, complete cds Length = 723 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatc 412 ||||| || |||||||||||||||||||| |||||||||| Sbjct: 436 gtgcacccaaacataggcagcttccacatggtccagtatc 397
>gb|M31640.1|CIPRBC Ice plant ribulose-1-5-bisphosphate carboxylase (rbc5) gene, complete cds Length = 776 Score = 56.0 bits (28), Expect = 1e-04 Identities = 73/88 (82%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 559 aggcgatgaaactgatacactgtacttgacgcacgttgtcgaatccgatgatacggatga 500 Query: 312 aagcgtcagggtactccttcttgacctc 339 | || |||||||| |||||||| |||| Sbjct: 499 aggcctcagggtaagccttcttggcctc 472 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 445 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 403
>gb|DQ178607.1| Haematococcus pluvialis ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, complete cds; plastid Length = 810 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| ||||||||||||| ||||||||| Sbjct: 399 ggtcagtgcagccgaacatgggcagcttccacagtgtccagta 357
>gb|AY530156.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS2) gene, complete cds Length = 3321 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 2403 ggtcagtgcagccgaacatgggcagcttccacatggtccagta 2361
>gb|AY530155.1| Dunaliella tertiolecta ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit (rbcS1) gene, complete cds Length = 3256 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1903 ggtcagtgcagccgaacatgggcagcttccacatggtccagta 1861
>gb|J01256.1|PEARBPC Pisum sativum ribulose-1,5-bisphosphate carboxylase small subunit precursor mRNA, partial cds Length = 669 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 263 aacataggaagcttccacattgtccagtatc 233
>gb|BC038257.1| Mus musculus cDNA clone MGC:47002 IMAGE:5148367, complete cds Length = 763 Score = 54.0 bits (27), Expect = 6e-04 Identities = 83/99 (83%), Gaps = 2/99 (2%) Strand = Plus / Minus Query: 312 aagcgtcagggtactccttcttgacctcctccacctcgttaagcacnctgtgtggcggtc 371 |||| |||||||| |||||||||||||||| ||||| || | ||| ||| | | |||| Sbjct: 515 aagcatcagggtaagccttcttgacctcctcaacctcattcaccac-ctgagctg-ggtc 458 Query: 372 ggtgcatccgaacataggcagcttccacattgtccagta 410 ||||| ||||||||||||| ||||||||| |||||||| Sbjct: 457 agtgcacccgaacataggcaacttccacatagtccagta 419 Score = 50.1 bits (25), Expect = 0.009 Identities = 37/41 (90%) Strand = Plus / Minus Query: 539 gtggtgaggggtggcaagtaagacagggtctcgaacttctt 579 |||||||| ||||| | |||||| ||||||||||||||||| Sbjct: 291 gtggtgagaggtggaaggtaagagagggtctcgaacttctt 251
>gb|AY267674.1| Bigelowiella natans ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit 1 mRNA, complete cds; nuclear gene for plastid product Length = 986 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 378 tccgaacataggcagcttccacattgtccagtatcggcc 416 |||||||||||| ||||||||||| |||||||| ||||| Sbjct: 425 tccgaacataggaagcttccacatggtccagtagcggcc 387
>emb|AJ786661.1| Limonium gibertii mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS2 gene) Length = 465 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||||||| |||| || |||||||||||||||||||| Sbjct: 334 ggtcagtgcatccgtacatgggaagcttccacattgtccagta 292 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 560 gacagggtctcgaacttcttgataccctcaatcggccacacctgcatgcac 610 |||| ||||||||||||||| | |||||| |||||||||||||||||| Sbjct: 143 gacaaggtctcgaacttcttcaaaccctctggtggccacacctgcatgcac 93
>emb|AJ786660.1| Limonium gibertii partial mRNA for ribulose 1,5 bisphosphate carboxylase/oxygenase small subunit (rbcS1 gene) Length = 459 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||||||| |||| || |||||||||||||||||||| Sbjct: 334 ggtcagtgcatccgtacatgggaagcttccacattgtccagta 292
>emb|X61097.1|BNRBCS B.napus rbcS gene for the small subunit of ribulose 1,5-bisphosphate carboxylase Length = 2714 Score = 54.0 bits (27), Expect = 6e-04 Identities = 54/62 (87%), Gaps = 1/62 (1%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtacccggg 432 ||||||||||||| || |||||||||||||||||||| || || |||||||| ||||| Sbjct: 2286 gtgcatccgaacaagggaagcttccacattgtccagtaacgtcca-tcgtagtatccggg 2228 Query: 433 gg 434 || Sbjct: 2227 gg 2226
>emb|BX833317.1|CNS0A0CV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL44ZC08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 733 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 372 ggtgcatccgaacataggcagcttccacattgtccagta 410 |||||||||||||| || |||||||||||||||||||| Sbjct: 437 ggtgcatccgaacaatggaagcttccacattgtccagta 399
>gb|M25613.1|PEARUBP2 Pisum sativum ribulose 1,5 bisphosphate carboxylase (RuBP) mRNA, partial cds Length = 674 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 272 aacataggaagcttccacattgtccagtatc 242
>emb|X04334.1|PSRBCS3C Pea rbcS-3C gene for ribulose 1.5-bisphosphate carboxylase (RBC) small subunit Length = 1381 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 892 aacataggaagcttccacattgtccagtatc 862
>emb|X04333.1|PSRBCS3A Pea rbcS-3A gene for ribulose 1.5-bisphosphate carboxylase (RBC) small subunit Length = 2061 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 1384 aacataggaagcttccacattgtccagtatc 1354 Score = 44.1 bits (22), Expect = 0.55 Identities = 28/30 (93%) Strand = Plus / Minus Query: 286 gttgtcgaagccgatgatacggacgtaagc 315 ||||||||| ||||||||||||||| |||| Sbjct: 1478 gttgtcgaaaccgatgatacggacgaaagc 1449
>emb|X51811.1|AMRBCSM1 Acetabularia mediterranea mRNA for ribulose 1,5-bisphosphate carboxylase/oxygenase, small subunit (rbcS gene), clone M1 Length = 833 Score = 54.0 bits (27), Expect = 6e-04 Identities = 36/39 (92%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtcca 407 |||||||||||| |||||||||| ||||||||| ||||| Sbjct: 435 gtcggtgcatccaaacataggcaacttccacatcgtcca 397
>emb|X00806.1|PSRC01 Pea gene for rib-1,5-bisphospate carboxylase (rbcS) small subunit (EC 4.1.1.39) Length = 2351 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 1645 aacataggaagcttccacattgtccagtatc 1615
>emb|X13974.1|CMRBPC Chlamydomonas moewusii rbcS mRNA for ribulose 1,5-bisphosphate carboxylase small subunit (EC 4.1.1.39) Length = 846 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||||||||||||| |||||||| Sbjct: 376 ggtcagtgcagccgaacatgggcagcttccacatggtccagta 334
>gb|J01257.1|PEARUBPA Pea (P.sativum) ribulose 1,5-bisphosphate carboxylase small subunit mRNA, clone pSS15 Length = 619 Score = 54.0 bits (27), Expect = 6e-04 Identities = 30/31 (96%) Strand = Plus / Minus Query: 382 aacataggcagcttccacattgtccagtatc 412 |||||||| |||||||||||||||||||||| Sbjct: 323 aacataggaagcttccacattgtccagtatc 293
>gb|M38318.1|CIPRBCS4 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-4) mRNA, complete cds Length = 747 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 430 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 388
>gb|M38317.1|CIPRBCS3 Mesembryanthemum crystallinum ribulose-1,5- bisphosphate carboxylase/oxygenase small subunit (rbcS-3) mRNA, complete cds Length = 765 Score = 54.0 bits (27), Expect = 6e-04 Identities = 75/91 (82%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacggacgt 311 |||||||||| |||| ||||| || || |||| ||||||||| ||||||||||||| | Sbjct: 542 aggcgatgaaactgatacactggacttgacgcacgttgtcgaatccgatgatacggatga 483 Query: 312 aagcgtcagggtactccttcttgacctcctc 342 | || |||||||| ||||||| ||||||| Sbjct: 482 aggcctcagggtaagccttctttgcctcctc 452 Score = 54.0 bits (27), Expect = 6e-04 Identities = 39/43 (90%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagta 410 |||| ||||| |||||||| |||| |||||||||||||||||| Sbjct: 428 ggtcagtgcaaccgaacatgggcaacttccacattgtccagta 386 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 556 gtaagacagggtctcgaacttctt 579 ||||||||| |||||||||||||| Sbjct: 241 gtaagacagagtctcgaacttctt 218
>ref|NM_202369.1| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.2 mRNA, complete cds Length = 871 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| ||||||| || |||||||||||||||||||| Sbjct: 423 gtcggtgcaaccgaacaagggaagcttccacattgtccagta 382
>ref|NM_105379.2| Arabidopsis thaliana ribulose-bisphosphate carboxylase AT1G67090 transcript variant AT1G67090.1 mRNA, complete cds Length = 878 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| ||||||| || |||||||||||||||||||| Sbjct: 430 gtcggtgcaaccgaacaagggaagcttccacattgtccagta 389
>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete sequence Length = 90387 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Plus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| ||||||| || |||||||||||||||||||| Sbjct: 78309 gtcggtgcaaccgaacaagggaagcttccacattgtccagta 78350
>gb|BT000362.1| Arabidopsis thaliana ribulose bisphosphate carboxylase, small subunit (At1g67090) mRNA, complete cds Length = 583 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| ||||||| || |||||||||||||||||||| Sbjct: 402 gtcggtgcaaccgaacaagggaagcttccacattgtccagta 361
>emb|AJ439989.1|OSA439989 Oryza sativa partial mRNA for ribulose 1,5-bisphosphate carboxylase, small subunit (rbpc-L gene) Length = 432 Score = 52.0 bits (26), Expect = 0.002 Identities = 109/137 (79%), Gaps = 2/137 (1%) Strand = Plus / Minus Query: 368 ggtcggtgcatccgaacataggcagcttccacattgtccagtatcggccngtcgtagtac 427 |||| ||||| ||||| || ||||||||||| || |||||||| | || | |||||| Sbjct: 355 ggtcagtgcacccgaanatgggcagcttccanatggtccagtacctncca-ttgtagtat 297 Query: 428 ccgggggagcctgttgtgctcacggaagacgaagccaaccttgctgaactcgaggcaggg 487 |||||||| || | || |||||| | ||||| || ||||| |||||||||||||||| Sbjct: 296 ccggggga-tctntggttntcacggtaaacgaatccnnccttgttgaactcgaggcaggg 238 Query: 488 cacccacttggagcgga 504 | ||| |||||| |||| Sbjct: 237 cncccccttggaacgga 221
>emb|V00458.1|GMRUBP Glycine max gene encoding ribulose-1,5-bisphosphate carboxylase small subunit Length = 1601 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || |||||||||||||||||||| |||||||| Sbjct: 1166 gtgcagccaaacataggcagcttccacatggtccagta 1129 Score = 50.1 bits (25), Expect = 0.009 Identities = 49/57 (85%) Strand = Plus / Minus Query: 252 aggcgatgaagctgacgcactgcacctgccgcaggttgtcgaagccgatgatacgga 308 ||||||||||||||| ||||||||| || || | |||||| || || |||||||||| Sbjct: 1285 aggcgatgaagctgatgcactgcacttggcgaacgttgtcaaatccaatgatacgga 1229
>emb|X13611.1|ATRBCSA Arabidopsis thaliana ats1A gene for ribulose 1.5-biphoshate carboxylase small subunit (EC 4.1.1.39) Length = 2821 Score = 52.0 bits (26), Expect = 0.002 Identities = 38/42 (90%) Strand = Plus / Minus Query: 369 gtcggtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||| ||||||| || |||||||||||||||||||| Sbjct: 2375 gtcggtgcaaccgaacaagggaagcttccacattgtccagta 2334
>emb|X16435.1|SARUBISC Mustard Rubisco mRNA for the small subunit of ribulose bisphosphate carboxylase Length = 322 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||||||||||| || |||||||||||||||||||| Sbjct: 101 gtgcatccgaacaagggaagcttccacattgtccagta 64
>emb|X66617.1|EGRBCS5 Euglena gracilis partial rbcS gene for ribulose 1-5 bisphosphate carboxylase/oxygenase, exons 1 to 3 Length = 1606 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| |||||||| |||||||||||||| |||||||| Sbjct: 1446 gtgcagccgaacatgggcagcttccacatggtccagta 1409
>gb|AY273795.1| Citrus limon ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 357 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Minus Query: 373 gtgcatccgaacataggcagcttccacattgtccagta 410 ||||| || ||||| ||||||||||||||||||||||| Sbjct: 251 gtgcacccaaacatgggcagcttccacattgtccagta 214 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,300,997 Number of Sequences: 3902068 Number of extensions: 5300997 Number of successful extensions: 116142 Number of sequences better than 10.0: 412 Number of HSP's better than 10.0 without gapping: 409 Number of HSP's successfully gapped in prelim test: 3 Number of HSP's that attempted gapping in prelim test: 114611 Number of HSP's gapped (non-prelim): 1159 length of query: 633 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 610 effective length of database: 17,143,297,704 effective search space: 10457411599440 effective search space used: 10457411599440 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)