ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbasd11p07 |
|---|---|
| Clone Library Name | barley_pub |
>RS29_GRIJA (Q7XYB0) 40S ribosomal protein S29| Length = 56 Score = 95.9 bits (237), Expect = 2e-20 Identities = 39/56 (69%), Positives = 44/56 (78%) Frame = -2 Query: 363 MGHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 MGH N+W SHP+ G GSR C++CGN HGLIRKY + CRQCFR AKDIGFIKYR Sbjct: 1 MGHQNIWYSHPRKYGKGSRSCKICGNKHGLIRKYSMNICRQCFREYAKDIGFIKYR 56
>RS29_SPOFR (Q8WQI3) 40S ribosomal protein S29| Length = 56 Score = 87.0 bits (214), Expect = 1e-17 Identities = 37/54 (68%), Positives = 40/54 (74%) Frame = -2 Query: 363 MGHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 MGH+N+W SHP+ G GSR CR C N HGLIRKYGL CRQCFR A DIGF K Sbjct: 1 MGHANIWYSHPRRYGQGSRSCRACSNRHGLIRKYGLNICRQCFREYAHDIGFKK 54
>RS29_NEUCR (Q9C2P2) 40S ribosomal protein S29| Length = 56 Score = 84.3 bits (207), Expect = 6e-17 Identities = 37/56 (66%), Positives = 41/56 (73%) Frame = -2 Query: 363 MGHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 M H +VWNS P+ G GSR CRVC +S GLIRKYGL CRQCFR A DIGF K+R Sbjct: 1 MSHESVWNSRPRTYGKGSRSCRVCTHSAGLIRKYGLNICRQCFREKANDIGFTKHR 56
>RS29_RAT (P62275) 40S ribosomal protein S29| Length = 55 Score = 84.0 bits (206), Expect = 8e-17 Identities = 37/53 (69%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGFIK Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53
>RS29_MOUSE (P62274) 40S ribosomal protein S29| Length = 55 Score = 84.0 bits (206), Expect = 8e-17 Identities = 37/53 (69%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGFIK Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53
>RS29_HUMAN (P62273) 40S ribosomal protein S29| Length = 55 Score = 84.0 bits (206), Expect = 8e-17 Identities = 37/53 (69%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGFIK Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53
>RS29_BOVIN (P62276) 40S ribosomal protein S29| Length = 55 Score = 84.0 bits (206), Expect = 8e-17 Identities = 37/53 (69%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGFIK Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53
>RS29_ICTPU (Q90YP2) 40S ribosomal protein S29| Length = 55 Score = 83.6 bits (205), Expect = 1e-16 Identities = 36/53 (67%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGF+K Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 53
>RS29_HIPCM (Q6UZG0) 40S ribosomal protein S29| Length = 55 Score = 83.6 bits (205), Expect = 1e-16 Identities = 36/53 (67%), Positives = 40/53 (75%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 GH ++ SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGF+K Sbjct: 1 GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFVK 53
>RS29_CULQU (Q9NB51) 40S ribosomal protein S29| Length = 56 Score = 83.6 bits (205), Expect = 1e-16 Identities = 35/54 (64%), Positives = 41/54 (75%) Frame = -2 Query: 363 MGHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 MG +++W SHP+ G GSR CR C N+HG+IRKYGL CRQCFR AKDIGF K Sbjct: 1 MGFADLWYSHPRKYGQGSRFCRACSNNHGMIRKYGLNICRQCFREYAKDIGFRK 54
>RS29A_YEAST (P41057) 40S ribosomal protein S29-A (S36) (YS29)| Length = 55 Score = 82.4 bits (202), Expect = 2e-16 Identities = 36/54 (66%), Positives = 39/54 (72%) Frame = -2 Query: 357 HSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 H NVW SHP+ G GSR CRVC + GLIRKYGL CRQCFR A DIGF K+R Sbjct: 2 HENVWFSHPRRYGKGSRQCRVCSSHTGLIRKYGLNICRQCFREKANDIGFNKFR 55
>RS29_DROME (Q9VH69) 40S ribosomal protein S29| Length = 56 Score = 81.3 bits (199), Expect = 5e-16 Identities = 35/54 (64%), Positives = 38/54 (70%) Frame = -2 Query: 363 MGHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 MG + +W SHP+ G GSR CR C N HGLIRKYGL CRQCFR A DIGF K Sbjct: 1 MGFATLWYSHPRKYGQGSRCCRACSNRHGLIRKYGLNICRQCFREYANDIGFKK 54
>RS29B_YEAST (P41058) 40S ribosomal protein S29-B (S36) (YS29)| Length = 55 Score = 80.9 bits (198), Expect = 7e-16 Identities = 35/54 (64%), Positives = 38/54 (70%) Frame = -2 Query: 357 HSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 H NVW SHP+ G GSR CRVC + GL+RKY L CRQCFR A DIGF KYR Sbjct: 2 HENVWFSHPRRFGKGSRQCRVCSSHTGLVRKYDLNICRQCFREKANDIGFHKYR 55
>RS29_PIG (Q6QAP6) 40S ribosomal protein S29| Length = 55 Score = 79.3 bits (194), Expect = 2e-15 Identities = 36/53 (67%), Positives = 38/53 (71%) Frame = -2 Query: 360 GHSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 G + SHP+ G GSR CRVC N HGLIRKYGL CRQCFR AKDIGFIK Sbjct: 1 GPQGFYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 53
>RS29_SCHPO (O74329) 40S ribosomal protein S29| Length = 55 Score = 70.5 bits (171), Expect = 1e-12 Identities = 33/54 (61%), Positives = 35/54 (64%) Frame = -2 Query: 357 HSNVWNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 H NVW SHP+ G GSR C G GLIRKYGL RQ FR A DIGF+KYR Sbjct: 2 HENVWFSHPRKYGKGSRQCAHTGRRLGLIRKYGLNISRQSFREYANDIGFVKYR 55
>RS14_METTH (O26125) 30S ribosomal protein S14P| Length = 50 Score = 57.4 bits (137), Expect = 8e-09 Identities = 25/45 (55%), Positives = 29/45 (64%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 P+ G SR C CG+ L+R+YGLM CRQCFR A IGF KY Sbjct: 5 PRKYGKASRKCSRCGDHSALVRRYGLMLCRQCFRELAPKIGFKKY 49
>RS14_ARCFU (O28368) 30S ribosomal protein S14P| Length = 51 Score = 55.8 bits (133), Expect = 2e-08 Identities = 25/44 (56%), Positives = 28/44 (63%) Frame = -2 Query: 330 KNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 K G G+ CR CG GLIR YGL CRQCFR A ++GF KY Sbjct: 7 KVFGRGANECRRCGRRRGLIRMYGLYLCRQCFREVASELGFKKY 50
>RS14_METVA (P14041) 30S ribosomal protein S14P| Length = 53 Score = 53.1 bits (126), Expect = 2e-07 Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%) Frame = -2 Query: 321 GPGSRVCRVCGNSH-GLIRKYGLMCCRQCFRSNAKDIGFIKY 199 G GS+VC+ CG G+IRKYGL CRQCFR A +GF KY Sbjct: 11 GQGSKVCKRCGRKGPGIIRKYGLDLCRQCFRELAPKLGFKKY 52
>RS14_SULTO (Q975J4) 30S ribosomal protein S14P| Length = 57 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/45 (51%), Positives = 30/45 (66%) Frame = -2 Query: 330 KNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 + G G +VCR CG+ +I+KYGL CRQCFR A ++GF K R Sbjct: 13 RKYGRGVQVCRRCGSRDSVIQKYGLYLCRQCFREVAYEMGFKKTR 57
>RS14_AERPE (P58731) 30S ribosomal protein S14P| Length = 54 Score = 52.0 bits (123), Expect = 4e-07 Identities = 23/46 (50%), Positives = 29/46 (63%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 PK G G++ C+ CG +I+KYGL CRQCFR A +GF K R Sbjct: 9 PKRMGRGAQRCQRCGTRDAVIQKYGLYLCRQCFREIAPTLGFRKNR 54
>RS14_THEVO (Q97BW2) 30S ribosomal protein S14P| Length = 53 Score = 51.2 bits (121), Expect = 6e-07 Identities = 20/35 (57%), Positives = 24/35 (68%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 C CG G++RKYGL CRQCFR A+ +GF KY Sbjct: 18 CVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEKY 52
>RS14_THEAC (Q9HIS1) 30S ribosomal protein S14P| Length = 53 Score = 50.1 bits (118), Expect = 1e-06 Identities = 19/35 (54%), Positives = 24/35 (68%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 C CG G++R+YGL CRQCFR A+ +GF KY Sbjct: 18 CVRCGRKRGIVRRYGLHLCRQCFRETARQLGFEKY 52
>RS14_SULSO (Q97ZQ5) 30S ribosomal protein S14P| Length = 57 Score = 50.1 bits (118), Expect = 1e-06 Identities = 20/44 (45%), Positives = 29/44 (65%) Frame = -2 Query: 330 KNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 + G G + C+ CG+ +I+KYG+ CRQCFR A ++GF KY Sbjct: 13 RKYGKGVQSCQRCGSKDSVIQKYGIYLCRQCFREVAYELGFRKY 56
>RS29_ENCCU (Q8SS73) 40S ribosomal protein S29| Length = 55 Score = 49.3 bits (116), Expect = 2e-06 Identities = 26/48 (54%), Positives = 29/48 (60%) Frame = -2 Query: 342 NSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 +SH K G GSR C C G+IRK LM CR+CFR A DIGF Y Sbjct: 9 HSHRKPFGKGSRSCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIY 54
>RS14_SULAC (O05635) 30S ribosomal protein S14P| Length = 54 Score = 48.9 bits (115), Expect = 3e-06 Identities = 21/45 (46%), Positives = 29/45 (64%) Frame = -2 Query: 330 KNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKYR 196 + G G ++C+ CG+ +I+KYGL CRQCFR A +GF K R Sbjct: 10 RRFGKGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRKTR 54
>RS14_METJA (P54110) 30S ribosomal protein S14P| Length = 53 Score = 48.9 bits (115), Expect = 3e-06 Identities = 25/44 (56%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = -2 Query: 330 KNXGPGSRVCRVCGN-SHGLIRKYGLMCCRQCFRSNAKDIGFIK 202 K G G R C+ CG+ GLIRKYGL CRQCFR A +GF K Sbjct: 8 KKYGYGIRPCQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKK 51
>RS14_PYRHO (P62013) 30S ribosomal protein S14P| Length = 56 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 P+ G G+R C CG +IR +GLM CR CFR A +GF KY Sbjct: 11 PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55
>RS14_PYRAB (P62012) 30S ribosomal protein S14P| Length = 56 Score = 48.5 bits (114), Expect = 4e-06 Identities = 22/45 (48%), Positives = 27/45 (60%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 P+ G G+R C CG +IR +GLM CR CFR A +GF KY Sbjct: 11 PRKFGKGARRCIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKY 55
>RS14_HALSA (Q9HPC0) 30S ribosomal protein S14P| Length = 52 Score = 47.8 bits (112), Expect = 7e-06 Identities = 19/35 (54%), Positives = 23/35 (65%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 CR CG GL+ KY + CRQCFR A+ +GF KY Sbjct: 17 CRRCGREQGLVGKYDIWLCRQCFREIARSMGFKKY 51
>RS14_PYRAE (Q8ZVW1) 30S ribosomal protein S14P| Length = 54 Score = 45.4 bits (106), Expect = 3e-05 Identities = 19/35 (54%), Positives = 22/35 (62%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 C CG +IRKYGL CR+CFR A +GF KY Sbjct: 19 CLRCGTREAVIRKYGLYLCRRCFREVAPQLGFKKY 53
>RS14_HALMA (P26816) 30S ribosomal protein S14P (HmaS14)| Length = 61 Score = 44.7 bits (104), Expect = 6e-05 Identities = 17/35 (48%), Positives = 23/35 (65%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKDIGFIKY 199 C+ CG GL+ KY + CRQCFR ++ +GF KY Sbjct: 26 CQRCGREQGLVGKYDIWLCRQCFREISRGMGFRKY 60
>RS14_CLOAB (Q97EJ1) 30S ribosomal protein S14| Length = 61 Score = 39.7 bits (91), Expect = 0.002 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 345 WNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 223 W PK C++CG H +++KYG+ CR CFR A Sbjct: 10 WKKEPKYSTRAYTRCKICGRPHSVLKKYGI--CRICFRELA 48
>RS14_CLOPE (Q8XHT6) 30S ribosomal protein S14| Length = 61 Score = 38.1 bits (87), Expect = 0.005 Identities = 16/41 (39%), Positives = 22/41 (53%) Frame = -2 Query: 345 WNSHPKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 223 W PK CR+CG H +++K+G+ CR CFR A Sbjct: 10 WKKEPKYKTRAYTRCRLCGRPHSVLKKFGI--CRICFRELA 48
>INVO_MOUSE (P48997) Involucrin| Length = 467 Score = 33.9 bits (76), Expect = 0.099 Identities = 19/60 (31%), Positives = 30/60 (50%) Frame = -1 Query: 352 ERLELAPQELRPRIQGLPCLRQLAWPDPQVRADVLQAVLPQQRQGHRXHQVPLRMETSKE 173 + L L Q+L QGL CL Q +PQ++ L+ QQ+Q + Q + ET ++ Sbjct: 98 QELHLEKQQLPQEPQGLLCLEQQQQQEPQMQEQHLRQQQQQQQQQQQQQQQQQQQETQEQ 157
>RS14_HELPJ (Q9ZJS5) 30S ribosomal protein S14| Length = 61 Score = 32.7 bits (73), Expect = 0.22 Identities = 13/29 (44%), Positives = 17/29 (58%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKD 217 CR+CG H + R +GL CR C R A + Sbjct: 24 CRICGRPHSVYRDFGL--CRVCLRKMASE 50
>RS14_MYCGA (O52345) 30S ribosomal protein S14| Length = 61 Score = 31.6 bits (70), Expect = 0.49 Identities = 12/24 (50%), Positives = 16/24 (66%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFR 232 C+ CG H + RK+G+ CR CFR Sbjct: 24 CKRCGRPHAVYRKFGI--CRLCFR 45
>RS14A_STRCO (P66417) 30S ribosomal protein S14-1| Length = 61 Score = 31.6 bits (70), Expect = 0.49 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 223 PK G C+ CG H + RK+GL CR C R A Sbjct: 14 PKFGVRGYTRCQRCGRPHSVYRKFGL--CRVCLREMA 48
>RS14A_STRAW (P66418) 30S ribosomal protein S14-1| Length = 61 Score = 31.6 bits (70), Expect = 0.49 Identities = 16/37 (43%), Positives = 19/37 (51%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 223 PK G C+ CG H + RK+GL CR C R A Sbjct: 14 PKFGVRGYTRCQRCGRPHSVYRKFGL--CRVCLREMA 48
>RS14_MYCPU (Q98PZ5) 30S ribosomal protein S14| Length = 61 Score = 31.2 bits (69), Expect = 0.64 Identities = 12/29 (41%), Positives = 19/29 (65%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNAKD 217 C++CG H ++RK+ + CR CFR A + Sbjct: 24 CQLCGRPHAVLRKFEI--CRICFRKLAHE 50
>RS14_MYCCT (P10130) 30S ribosomal protein S14| Length = 61 Score = 31.2 bits (69), Expect = 0.64 Identities = 12/27 (44%), Positives = 17/27 (62%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H +++K+G+ CR CFR A Sbjct: 24 CNHCGRPHAVLKKFGI--CRLCFRKFA 48
>RS14_HELPY (P56021) 30S ribosomal protein S14| Length = 61 Score = 31.2 bits (69), Expect = 0.64 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFR 232 CR+CG H + R +GL CR C R Sbjct: 24 CRICGRPHSVYRDFGL--CRVCLR 45
>TRFL_PIG (P14632) Lactotransferrin precursor (EC 3.4.21.-) (Lactoferrin)| Length = 704 Score = 31.2 bits (69), Expect = 0.64 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 9/48 (18%) Frame = -2 Query: 318 PGSRVCRVC-GNSHGLI--------RKYGLMCCRQCFRSNAKDIGFIK 202 PGS +C +C GN G+ R YG +C NA D+ F+K Sbjct: 512 PGSNLCALCVGNDQGVDKCVPNSNERYYGYTGAFRCLAENAGDVAFVK 559
>RS14A_LISMO (P66401) 30S ribosomal protein S14-1| Length = 61 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H +IRK+ L CR CFR A Sbjct: 24 CERCGRPHSVIRKFKL--CRICFRELA 48
>RS14A_LISIN (P66402) 30S ribosomal protein S14-1| Length = 61 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H +IRK+ L CR CFR A Sbjct: 24 CERCGRPHSVIRKFKL--CRICFRELA 48
>RS14A_BACSU (P12878) 30S ribosomal protein S14-1 (BS-A)| Length = 60 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H +IRK+ L CR CFR A Sbjct: 23 CERCGRPHSVIRKFKL--CRICFRELA 47
>SERC_PHOLL (Q7N6D6) Phosphoserine aminotransferase (EC 2.6.1.52) (PSAT)| Length = 362 Score = 30.0 bits (66), Expect = 1.4 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%) Frame = +3 Query: 93 VHYIVYRIIK-IGLDEAPQFDDNFLVLASFEVSILNG 200 VHY I I + E P F DN +++A + SIL+G Sbjct: 146 VHYCPNETIDGIAIHEQPDFSDNKIIIADYSSSILSG 182
>RS14_THEMA (Q9ZAE6) 30S ribosomal protein S14| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C +CG + R++GL CR CFR A Sbjct: 24 CHICGRPRAVYREFGL--CRICFRKLA 48
>RS14_BACHD (Q9Z9K1) 30S ribosomal protein S14| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H ++RK+ L CR CFR A Sbjct: 24 CERCGRPHSVMRKFKL--CRICFRELA 48
>RS14A_STRP8 (P66423) 30S ribosomal protein S14-1| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CEKCGRPHSVYRKFKL--CRVCFRELA 48
>RS14A_STRP6 (Q5XEC2) 30S ribosomal protein S14-1| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CEKCGRPHSVYRKFKL--CRVCFRELA 48
>RS14A_STRP3 (P66422) 30S ribosomal protein S14-1| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CEKCGRPHSVYRKFKL--CRVCFRELA 48
>RS14A_STRP1 (P66421) 30S ribosomal protein S14-1| Length = 61 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CEKCGRPHSVYRKFKL--CRVCFRELA 48
>RS14_UREPA (Q9PQP7) 30S ribosomal protein S14| Length = 61 Score = 28.9 bits (63), Expect = 3.2 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+G+ CR CFR A Sbjct: 24 CVRCGRPHAVNRKFGV--CRLCFRDLA 48
>RS14_CAMJE (Q9PLY4) 30S ribosomal protein S14| Length = 61 Score = 28.9 bits (63), Expect = 3.2 Identities = 10/24 (41%), Positives = 15/24 (62%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFR 232 C++CG H + R +G+ CR C R Sbjct: 24 CQICGRPHSVYRDFGI--CRVCLR 45
>C71BJ_ARATH (Q9LTM4) Cytochrome P450 71B19 (EC 1.14.-.-)| Length = 502 Score = 28.9 bits (63), Expect = 3.2 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 7/45 (15%) Frame = -2 Query: 276 LIRKYGLMCCRQ-------CFRSNAKDIGFIKYR*EWKPQRKQGL 163 ++R + L CC + + KDIGF Y EWK +RK L Sbjct: 86 VLRTHDLDCCSRPKLVGTRLLSRDFKDIGFTPYGNEWKARRKFAL 130
>C71B4_ARATH (O65786) Cytochrome P450 71B4 (EC 1.14.-.-)| Length = 504 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/41 (36%), Positives = 20/41 (48%), Gaps = 7/41 (17%) Frame = -2 Query: 273 IRKYGLMCCRQ-------CFRSNAKDIGFIKYR*EWKPQRK 172 ++ + L CC + F N KDIGF Y EW+ RK Sbjct: 89 LKTHDLECCSRPITMASRVFSRNGKDIGFGVYGDEWRELRK 129
>RS14_MYCLE (O32996) 30S ribosomal protein S14| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/37 (40%), Positives = 17/37 (45%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNA 223 PK G C CG + RK+GL CR C R A Sbjct: 14 PKFTVRGYTRCSKCGRPRAVFRKFGL--CRICLREMA 48
>RS14_BORBU (O51444) 30S ribosomal protein S14| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/39 (33%), Positives = 20/39 (51%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGNSHGLIRKYGLMCCRQCFRSNAKD 217 PK + C++CG G +R + + CR CFR A + Sbjct: 14 PKYKTRQNNRCKLCGRPRGYLRDFCM--CRICFRKYASE 50
>RS14_BACST (P54798) 30S ribosomal protein S14 (BS21)| Length = 60 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 23 CERCGRPHSVYRKFKL--CRICFRELA 47
>RS14A_STAAW (P66413) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>RS14A_STAAS (Q6G784) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>RS14A_STAAR (Q6GEJ6) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>RS14A_STAAN (P66412) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>RS14A_STAAM (P66411) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>RS14A_STAAC (Q5HDX1) 30S ribosomal protein S14-1| Length = 61 Score = 28.5 bits (62), Expect = 4.1 Identities = 13/27 (48%), Positives = 15/27 (55%) Frame = -2 Query: 303 CRVCGNSHGLIRKYGLMCCRQCFRSNA 223 C CG H + RK+ L CR CFR A Sbjct: 24 CERCGRPHSVYRKFKL--CRICFRELA 48
>TOR3A_MOUSE (Q9ER38) Torsin-3A precursor (Torsin family 3 member A)| (ATP-dependent interferon-responsive protein) Length = 385 Score = 28.5 bits (62), Expect = 4.1 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 13/45 (28%) Frame = +2 Query: 218 SLALLRKHCLQHISPYLRIRPC-------------ELPQTRQTLD 313 S LL+KH + H P+L + C +LP T +TLD Sbjct: 308 SSGLLKKHLIDHFIPFLPLEYCHVRLCVRDAFLGQDLPYTEETLD 352
>NHR90_CAEEL (O17025) Nuclear hormone receptor family member nhr-90| Length = 393 Score = 28.1 bits (61), Expect = 5.4 Identities = 8/24 (33%), Positives = 14/24 (58%) Frame = -2 Query: 309 RVCRVCGNSHGLIRKYGLMCCRQC 238 + C++CG + +G+ CCR C Sbjct: 7 QTCKICGAENTRGNHFGVQCCRAC 30
>POL_JSRV (P31623) Pol polyprotein [Contains: Reverse| transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)] Length = 870 Score = 28.1 bits (61), Expect = 5.4 Identities = 16/51 (31%), Positives = 24/51 (47%) Frame = +2 Query: 200 YLMXPMSLALLRKHCLQHISPYLRIRPCELPQTRQTLDPGPXFLGCEFQTF 352 +LM + +HC+QH+ +PQT +T D GP + FQ F Sbjct: 678 FLMASLHTGESTRHCIQHL--LFCFSTSGIPQTLKT-DNGPGYTSRSFQRF 725
>MUTL_AGRT5 (Q8UHI3) DNA mismatch repair protein mutL| Length = 606 Score = 28.1 bits (61), Expect = 5.4 Identities = 20/60 (33%), Positives = 26/60 (43%) Frame = +1 Query: 196 TVLDEXDVLGVAAEALPAAHQPVLADQAMRVAADTANPGSGAXVLGVRVPDVRVSHGGGG 375 T LD+ LG EALP+ +A + A GS V G +V DVR + G Sbjct: 82 TTLDDIRTLGFRGEALPSIGS--VAKLTITSRQQGAEQGSVISVTGGKVSDVRPAASNAG 139
>NHR7_CAEEL (Q20765) Nuclear hormone receptor family member nhr-7| Length = 536 Score = 27.7 bits (60), Expect = 7.1 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 3/35 (8%) Frame = -2 Query: 312 SRVCRVCGNSHGLIRKYGLMCCRQC---FRSNAKD 217 +R+C VCG++ I YG++ C C FR KD Sbjct: 6 NRICAVCGDTPAKIH-YGVLACFGCKGFFRRAVKD 39
>RXRB_RAT (P49743) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (Nuclear receptor coregulator 1) (Fragment) Length = 458 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGN-SHGLIRKYGLMCCRQC 238 P G G R+C +CG+ S G + YG+ C C Sbjct: 120 PGGPGAGKRLCAICGDRSSG--KHYGVYSCEGC 150
>RXRB_HUMAN (P28702) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGN-SHGLIRKYGLMCCRQC 238 P G G R+C +CG+ S G + YG+ C C Sbjct: 195 PGGPGAGKRLCAICGDRSSG--KHYGVYSCEGC 225
>RXRB_CANFA (Q5TJF7) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| Length = 533 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGN-SHGLIRKYGLMCCRQC 238 P G G R+C +CG+ S G + YG+ C C Sbjct: 195 PGGPGAGKRLCAICGDRSSG--KHYGVYSCEGC 225
>MT2B_ARATH (Q38805) Metallothionein-like protein 2B (MT-2B)| Length = 77 Score = 27.7 bits (60), Expect = 7.1 Identities = 10/24 (41%), Positives = 14/24 (58%) Frame = +3 Query: 228 CCGSTACSTSARTCGSGHASCRRH 299 CCG + SA CG+G C+R+ Sbjct: 3 CCGGSCGCGSACKCGNGCGGCKRY 26
>C71BT_ARATH (Q9SAE4) Cytochrome P450 71B29 (EC 1.14.-.-)| Length = 490 Score = 27.7 bits (60), Expect = 7.1 Identities = 12/19 (63%), Positives = 12/19 (63%) Frame = -2 Query: 228 NAKDIGFIKYR*EWKPQRK 172 N KDIGF Y EWK RK Sbjct: 104 NFKDIGFAPYGEEWKAMRK 122
>RXRB_MOUSE (P28704) Retinoic acid receptor RXR-beta (Retinoid X receptor beta)| (MHC class I regulatory element-binding protein H-2RIIBP) Length = 520 Score = 27.7 bits (60), Expect = 7.1 Identities = 13/33 (39%), Positives = 18/33 (54%), Gaps = 1/33 (3%) Frame = -2 Query: 333 PKNXGPGSRVCRVCGN-SHGLIRKYGLMCCRQC 238 P G G R+C +CG+ S G + YG+ C C Sbjct: 182 PGGPGAGKRLCAICGDRSSG--KHYGVYSCEGC 212
>NANC_SHIFL (P69858) Probable N-acetylneuraminic acid outer membrane channel| protein nanC precursor (Porin nanC) Length = 238 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -2 Query: 222 KDIGF-IKYR*EWKPQRKQGLGNYHRTAVLHRGRSLLSYKLCNELLLMFE 76 KD+ F I+YR +WK R+Q L +HR ++Y + ++ ++ Sbjct: 121 KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQ 170
>NANC_ECOLI (P69856) Probable N-acetylneuraminic acid outer membrane channel| protein nanC precursor (NanR-regulated channel) (Porin nanC) Length = 238 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -2 Query: 222 KDIGF-IKYR*EWKPQRKQGLGNYHRTAVLHRGRSLLSYKLCNELLLMFE 76 KD+ F I+YR +WK R+Q L +HR ++Y + ++ ++ Sbjct: 121 KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQ 170
>NANC_ECO57 (P69857) Probable N-acetylneuraminic acid outer membrane channel| protein nanC precursor (Porin nanC) Length = 238 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 1/50 (2%) Frame = -2 Query: 222 KDIGF-IKYR*EWKPQRKQGLGNYHRTAVLHRGRSLLSYKLCNELLLMFE 76 KD+ F I+YR +WK R+Q L +HR ++Y + ++ ++ Sbjct: 121 KDLNFGIRYRYDWKAYRQQDLSGDMSRDNVHRWDGYVTYHINSDFTFAWQ 170
>TLP1_PRUPE (P83332) Thaumatin-like protein 1 precursor (PpAZ44)| Length = 246 Score = 27.3 bits (59), Expect = 9.2 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 10/38 (26%) Frame = +3 Query: 219 PW--RCCGSTACSTSAR--------TCGSGHASCRRHG 302 PW R G T CST A CGSG SC +G Sbjct: 70 PWSGRFFGRTRCSTDASGKFTCATADCGSGQVSCNGNG 107
>ITB7_MOUSE (P26011) Integrin beta-7 precursor (Integrin beta-P) (M290 IEL| antigen) Length = 806 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 3/28 (10%) Frame = +3 Query: 225 RC-CGSTACS--TSARTCGSGHASCRRH 299 RC CG +CS +S R C ASC RH Sbjct: 542 RCQCGRCSCSGQSSGRLCECDDASCERH 569
>TISD_HUMAN (P47974) Butyrate response factor 2 (TIS11D protein) (EGF-response| factor 2) (ERF-2) Length = 492 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/30 (36%), Positives = 17/30 (56%) Frame = +3 Query: 219 PWRCCGSTACSTSARTCGSGHASCRRHGKP 308 P C +++CS+SA +C S A+ G P Sbjct: 290 PPSCSSASSCSSSASSCSSASAASTPSGAP 319
>GDA7_WHEAT (P04727) Alpha/beta-gliadin clone PW8142 precursor (Prolamin)| Length = 313 Score = 27.3 bits (59), Expect = 9.2 Identities = 17/57 (29%), Positives = 30/57 (52%) Frame = -1 Query: 328 ELRPRIQGLPCLRQLAWPDPQVRADVLQAVLPQQRQGHRXHQVPLRMETSKEARTRK 158 +L+P Q P L QL +P PQ + Q PQQR + Q P+ + +++ + ++ Sbjct: 74 QLQPFPQPQPFLPQLPYPQPQ--SFPPQQPYPQQRPKYLQPQQPISQQQAQQQQQQQ 128
>NOTC1_RAT (Q07008) Neurogenic locus notch homolog protein 1 precursor (Notch 1)| [Contains: Notch 1 extracellular truncation; Notch 1 intracellular domain] Length = 2531 Score = 27.3 bits (59), Expect = 9.2 Identities = 13/21 (61%), Positives = 14/21 (66%) Frame = +3 Query: 213 RCPWRCCGSTACSTSARTCGS 275 RCP R G+T C ARTCGS Sbjct: 1335 RCPARFEGAT-CENDARTCGS 1354
>IF2_BORPE (Q7VYR2) Translation initiation factor IF-2| Length = 997 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 205 DEXDVLGVAAEALPAAHQPVLADQAMRVAADTANP 309 +E V AEA PA +PV A+ A+ AA P Sbjct: 112 EEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEP 146
>IF2_BORBR (Q7WHG2) Translation initiation factor IF-2| Length = 997 Score = 27.3 bits (59), Expect = 9.2 Identities = 14/35 (40%), Positives = 18/35 (51%) Frame = +1 Query: 205 DEXDVLGVAAEALPAAHQPVLADQAMRVAADTANP 309 +E V AEA PA +PV A+ A+ AA P Sbjct: 112 EEAAAEAVPAEAAPAPAEPVRAEPAVETAAKPVEP 146
>C71BM_ARATH (Q9LTM1) Cytochrome P450 71B22 (EC 1.14.-.-)| Length = 500 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 237 FRSNAKDIGFIKYR*EWKPQRK 172 F N KDIGF +Y +W+ RK Sbjct: 104 FSYNYKDIGFAQYGDDWREMRK 125
>C71BL_ARATH (Q9LTM2) Cytochrome P450 71B21 (EC 1.14.-.-)| Length = 499 Score = 27.3 bits (59), Expect = 9.2 Identities = 11/22 (50%), Positives = 14/22 (63%) Frame = -2 Query: 237 FRSNAKDIGFIKYR*EWKPQRK 172 F N KDIGF +Y +W+ RK Sbjct: 104 FTYNFKDIGFAQYGEDWREMRK 125 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 51,534,348 Number of Sequences: 219361 Number of extensions: 956995 Number of successful extensions: 3222 Number of sequences better than 10.0: 88 Number of HSP's better than 10.0 without gapping: 3064 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3219 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 1407308304 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
