>gb|AY104407.1| Zea mays PCO114073 mRNA sequence
          Length = 1726

 Score = 52.0 bits (26), Expect = 4e-04
 Identities = 64/78 (82%)
 Strand = Plus / Minus

                                                                        
Query: 54   atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
            ||||||||||| | ||| || || |||||||| ||  ||||||||||||  || ||||||
Sbjct: 1372 atcggttggtccgcgaaaggcccgtatagccagcctttggcgatatggcggtaggcagcc 1313

                              
Query: 114  tncgtnaagtgaatgccg 131
            | ||| | ||||||||||
Sbjct: 1312 tccgtcaggtgaatgccg 1295

>ref|XM_464842.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1149

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                        
Query: 54   atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
            ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 1133 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 1074

                             
Query: 114  tncgtnaagtgaatgcc 130
            |  || | |||||||||
Sbjct: 1073 tctgtcaggtgaatgcc 1057

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                           
Query: 54      atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
               ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 8503788 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 8503729

                                
Query: 114     tncgtnaagtgaatgcc 130
               |  || | |||||||||
Sbjct: 8503728 tctgtcaggtgaatgcc 8503712

>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0011N12
          Length = 158586

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                          
Query: 54     atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
              ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 156638 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 156579

                               
Query: 114    tncgtnaagtgaatgcc 130
              |  || | |||||||||
Sbjct: 156578 tctgtcaggtgaatgcc 156562

>dbj|AP004018.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1113_G05
          Length = 131445

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                         
Query: 54    atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
             ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 53058 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 52999

                              
Query: 114   tncgtnaagtgaatgcc 130
             |  || | |||||||||
Sbjct: 52998 tctgtcaggtgaatgcc 52982

>dbj|AK070671.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M20, full
            insert sequence
          Length = 3220

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                        
Query: 54   atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
            ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 2934 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 2875

                             
Query: 114  tncgtnaagtgaatgcc 130
            |  || | |||||||||
Sbjct: 2874 tctgtcaggtgaatgcc 2858

>dbj|AK061300.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E12, full
           insert sequence
          Length = 1100

 Score = 42.1 bits (21), Expect = 0.39
 Identities = 62/77 (80%)
 Strand = Plus / Minus

                                                                       
Query: 54  atcggttggtctgngaangggccatatagccaacccctggcgatatggccataagcagcc 113
           ||||||||||| | ||| || ||||||| |||||| ||||| || || || ||||| |||
Sbjct: 814 atcggttggtcagcgaaaggaccatatacccaacctctggcaatgtgaccgtaagccgcc 755

                            
Query: 114 tncgtnaagtgaatgcc 130
           |  || | |||||||||
Sbjct: 754 tctgtcaggtgaatgcc 738


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 360,022
Number of Sequences: 3902068
Number of extensions: 360022
Number of successful extensions: 18277
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 18264
Number of HSP's gapped (non-prelim): 13
length of query: 131
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 110
effective length of database: 17,151,101,840
effective search space: 1886621202400
effective search space used: 1886621202400
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)