ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11o19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY846831.1| Triticum aestivum ribosomal protein S29 mRNA, com... 500 e-138
2ref|NM_194080.1| Oryza sativa (japonica cultivar-group), mRNA 272 1e-69
3gb|AY109342.1| Zea mays CL3469_4 mRNA sequence 204 2e-49
4gb|AF457936.1| Zea mays clone cho1c.pk002.j14, mRNA sequence 196 5e-47
5gb|AY110912.1| Zea mays CL3469_2 mRNA sequence 196 5e-47
6gb|BT017321.1| Zea mays clone EL01N0319C08.c mRNA sequence 186 4e-44
7dbj|AK059123.1| Oryza sativa (japonica cultivar-group) cDNA clon... 172 7e-40
8gb|AY109560.1| Zea mays CL3469_8 mRNA sequence 155 2e-34
9gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 153 6e-34
10gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genom... 153 6e-34
11dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 153 6e-34
12gb|DQ083212.1| Oryza sativa (indica cultivar-group) clone 7S11G3... 121 2e-24
13dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 121 2e-24
14gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 121 2e-24
15emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa... 121 2e-24
16gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
17dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 113 5e-22
18gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 113 5e-22
19gb|AY310769.1| Nicotiana benthamiana clone 8-039 unknown mRNA 101 2e-18
20gb|AY389605.1| Hyacinthus orientalis ribosomal protein S29 (RPS2... 88 3e-14
21emb|Y16127.1|LES16127 Lycopersicon esculentum mRNA for hypotheti... 86 1e-13
22ref|NM_114266.1| Arabidopsis thaliana structural constituent of ... 78 3e-11
23ref|NM_114269.2| Arabidopsis thaliana structural constituent of ... 78 3e-11
24gb|AF349528.1| Arabidopsis thaliana putative ribosomal S29 prote... 78 3e-11
25gb|AF326888.1| Arabidopsis thaliana putative ribosomal S29 prote... 78 3e-11
26gb|AY129480.1| Arabidopsis thaliana AT3g43980/T15B3_120 mRNA, co... 78 3e-11
27gb|AF361851.1| Arabidopsis thaliana AT3g43980/T15B3_120 mRNA, co... 78 3e-11
28gb|AF324695.2|AF324695 Arabidopsis thaliana AT3g43980 (AT3g43980... 78 3e-11
29emb|BX826239.1|CNS0A7QD Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
30emb|BX825142.1|CNS0A7PE Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
31emb|BX824534.1|CNS0A7RP Arabidopsis thaliana Full-length cDNA Co... 78 3e-11
32gb|BT004344.1| Arabidopsis thaliana clone U20117 putative riboso... 78 3e-11
33gb|AY086767.1| Arabidopsis thaliana clone 2749 mRNA, complete se... 78 3e-11
34gb|BT002766.1| Arabidopsis thaliana clone RAFL15-04-A21 (R20117)... 78 3e-11
35emb|BX822718.1|CNS0A7T6 Arabidopsis thaliana Full-length cDNA Co... 72 2e-09
36gb|AY088245.1| Arabidopsis thaliana clone 473 mRNA, complete seq... 72 2e-09
37emb|BX825609.1|CNS0A7QE Arabidopsis thaliana Full-length cDNA Co... 70 7e-09
38ref|NM_119544.3| Arabidopsis thaliana structural constituent of ... 68 3e-08
39gb|AF325031.2|AF325031 Arabidopsis thaliana AT3g43980 (AT3g43980... 68 3e-08
40emb|BX841605.1|CNS09YHD Arabidopsis thaliana Full-length cDNA Co... 68 3e-08
41dbj|AK176861.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
42dbj|AK176439.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
43dbj|AK176332.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
44dbj|AK176322.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
45dbj|AK176295.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
46dbj|AK176294.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
47dbj|AK176060.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
48dbj|AK175918.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
49dbj|AK175739.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
50dbj|AK175283.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
51dbj|AK175173.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
52dbj|AK175172.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
53dbj|AK175152.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
54dbj|AK175132.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 68 3e-08
55dbj|AK118617.1| Arabidopsis thaliana At4g33865 mRNA for putative... 68 3e-08
56emb|BX825823.1|CNS0A6FH Arabidopsis thaliana Full-length cDNA Co... 64 4e-07
57emb|BX828871.1|CNS0A3J1 Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
58gb|AY086371.1| Arabidopsis thaliana clone 24629 mRNA, complete s... 60 7e-06
59dbj|AK176815.1| Arabidopsis thaliana mRNA for ribosomal S29 subu... 60 7e-06
60ref|XM_426478.1| PREDICTED: Gallus gallus similar to ribosomal p... 56 1e-04
61emb|BX932172.1| Gallus gallus finished cDNA, clone ChEST468g22 56 1e-04
62gb|DQ108688.1| Arabidopsis thaliana clone 107113 mRNA sequence 56 1e-04
63emb|AL163975.1|ATT15B3 Arabidopsis thaliana DNA chromosome 3, BA... 54 4e-04
64emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, ... 54 4e-04
65emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BA... 54 4e-04
66emb|BX841514.1|CNS09YHL Arabidopsis thaliana Full-length cDNA Co... 54 4e-04
67gb|DQ214468.1| Taeniopygia guttata clone 0058P0046G06 40S riboso... 52 0.002
68gb|DQ214467.1| Taeniopygia guttata clone 0064P0002B10 40S riboso... 52 0.002
69gb|DQ108844.1| Arabidopsis thaliana clone 32764 mRNA sequence 46 0.10
70gb|DQ214470.1| Taeniopygia guttata clone 0058P0004E08 40S riboso... 44 0.41
71gb|DQ214469.1| Taeniopygia guttata clone 0058P0009G02 40S riboso... 44 0.41
72emb|Z79602.1|CEK09E9 Caenorhabditis elegans Cosmid K09E9, comple... 42 1.6
73emb|CR931730.1| Medicago truncatula chromosome 5 clone mth2-17o... 42 1.6
74gb|L24003.1|TOMTRALTAC Lycopersicon esculentum (DB113) meloidogy... 42 1.6
75gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chr... 40 6.3
76emb|BX530066.21| Zebrafish DNA sequence from clone DKEY-48C13 in... 40 6.3
77emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 m... 40 6.3
78emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 ... 40 6.3
79gb|AE011988.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.3
80gb|AE012444.1| Xanthomonas campestris pv. campestris str. ATCC 3... 40 6.3
81gb|DQ401084.1| Chlamydomonas sp. ICE-L ribosomal protein S29 sub... 40 6.3
82gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 40 6.3
83gb|AC093596.3| Homo sapiens BAC clone RP11-98M12 from 4, complet... 40 6.3
84gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 6.3
85gb|AY357068.1| Hippocampus comes 40S ribosomal protein S29 mRNA,... 40 6.3
86gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome 40 6.3
87gb|U50465.1|OCU50465 Oryctolagus cuniculus cardiac ryanodine rec... 40 6.3
88gb|M59743.1|RABCA2RE Rabbit cardiac muscle Ca-2+ release channel... 40 6.3 
>gb|AY846831.1| Triticum aestivum ribosomal protein S29 mRNA, complete cds
          Length = 398

 Score =  500 bits (252), Expect = e-138
 Identities = 315/334 (94%), Gaps = 4/334 (1%)
 Strand = Plus / Minus

                                                                       
Query: 74  ctcaaacagcagtcaccaacatggtttcacggatttgtcactccaattcaaacattaaca 133
           |||||||||||||| | ||||||||||||||| ||||||||    |||||||||| || |
Sbjct: 368 ctcaaacagcagtcgctaacatggtttcacggttttgtcaccaggattcaaacat-aata 310

                                                                       
Query: 134 gtagttcattacatagtttataggataataaagatcggcctcgatgaagcaccgcagttc 193
           |||||||||||||||| |||||||||||   ||||| |||||||||||||||| ||||||
Sbjct: 309 gtagttcattacatagcttataggataa---agatcagcctcgatgaagcaccacagttc 253

                                                                       
Query: 194 gatgataatttcctagtccttgcttcctttgaggtttccattcttaacggtacttgatga 253
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 gttgataatttcctagtccttgcttcctttgaggtttccattcttaacggtacttgatga 193

                                                                       
Query: 254 agccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagcccgtacttgc 313
           |||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agccaatgtccttggcgtcgctgcggaagcactgcctgcagcacatcagcccgtacttgc 133

                                                                       
Query: 314 ggatcaggccatgcgagttgccgcagacacggcaaaccctggatccggggccgtagttct 373
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 132 ggatcaggccatgcgagttgccgcagacacggcaaaccctggatccggcgccgtagttct 73

                                             
Query: 374 tggggtgcgagttccagacgttcgagtgtcccat 407
           ||||||||||||||||||||||||||||||||||
Sbjct: 72  tggggtgcgagttccagacgttcgagtgtcccat 39
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>ref|NM_194080.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 509

 Score =  272 bits (137), Expect = 1e-69
 Identities = 161/169 (95%)
 Strand = Plus / Minus

                                                                       
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcaca 298
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacggtacttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcaca 142

                                                                       
Query: 299 tcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatc 358
           | ||||||||||| ||||||| |||||||| ||||||||| |||||||||||||||||||
Sbjct: 141 tgagcccgtacttccggatcaagccatgcgggttgccgcaaacacggcaaaccctggatc 82

                                                            
Query: 359 cggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 81  cggggccgtagttcttggggtgcgagttccacacgttggagtgtcccat 33
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>gb|AY109342.1| Zea mays CL3469_4 mRNA sequence
          Length = 814

 Score =  204 bits (103), Expect = 2e-49
 Identities = 151/167 (90%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 225 cggtacttgatgaagccaatgtccttggcattgctgcggaagcactgcctgcagcacatc 166

                                                                       
Query: 301 agcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccg 360
           ||||||||||| | |||||| ||||| | |||  | ||||||||||| || | |||||||
Sbjct: 165 agcccgtacttcctgatcagtccatgagggttcgcacagacacggcagacgcgggatccg 106

                                                          
Query: 361 gggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           || |||||||||||||||||||||||||||||||| ||||| |||||
Sbjct: 105 ggcccgtagttcttggggtgcgagttccagacgttggagtgccccat 59
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>gb|AF457936.1| Zea mays clone cho1c.pk002.j14, mRNA sequence
          Length = 402

 Score =  196 bits (99), Expect = 5e-47
 Identities = 150/167 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 cggtacttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcacatc 136

                                                                       
Query: 301 agcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccg 360
           ||||||||||| | |||||| ||||| | |||  | ||||| ||||| || | |||||||
Sbjct: 135 agcccgtacttcctgatcagtccatgagggttcgcacagacccggcagacgcgggatccg 76

                                                          
Query: 361 gggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           || |||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 75  ggcccgtagttcttggggtgcgagttccacacgttggagtgccccat 29
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>gb|AY110912.1| Zea mays CL3469_2 mRNA sequence
          Length = 489

 Score =  196 bits (99), Expect = 5e-47
 Identities = 148/166 (89%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 257 cggtacttgatgaagccaatgtccttggcgttgctgcggaagcactgtctgcagcacatg 198

                                                                       
Query: 301 agcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccg 360
           ||||||||||| ||||||| ||| |     ||  |||| |||||||||||||| ||||| 
Sbjct: 197 agcccgtactttcggatcaagccgtnnnnnttagcgcacacacggcaaaccctagatcca 138

                                                         
Query: 361 gggccgtagttcttggggtgcgagttccagacgttcgagtgtccca 406
           ||||||||||||||||||||||||||||| ||||| ||||||||||
Sbjct: 137 gggccgtagttcttggggtgcgagttccacacgttggagtgtccca 92
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>gb|BT017321.1| Zea mays clone EL01N0319C08.c mRNA sequence
          Length = 424

 Score =  186 bits (94), Expect = 4e-44
 Identities = 148/166 (89%)
 Strand = Plus / Minus

                                                                       
Query: 242 ggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatca 301
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ggtacttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcacatca 149

                                                                       
Query: 302 gcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccgg 361
            ||||||||| | |||||| ||||| | |||  | ||||| ||||| || | ||||||||
Sbjct: 148 ccccgtacttcctgatcagtccatgagggttcgcacagacccggcagacgcgggatccgg 89

                                                         
Query: 362 ggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           | |||||||||||||||||||||||||| ||||| ||||| |||||
Sbjct: 88  gcccgtagttcttggggtgcgagttccacacgttggagtgccccat 43
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>dbj|AK059123.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-022-F08, full
           insert sequence
          Length = 457

 Score =  172 bits (87), Expect = 7e-40
 Identities = 147/167 (88%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 254 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgtctgcagcacatg 195

                                                                       
Query: 301 agcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccg 360
           ||||||||||| | |||||| ||||| | ||| ||||| || ||||| || | ||| || 
Sbjct: 194 agcccgtacttcctgatcagtccatgagggttcccgcacacccggcagacgcgggagccc 135

                                                          
Query: 361 gggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           || ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 134 ggcccgtagttcttggggtgggagttccacacgttggagtgccccat 88
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>gb|AY109560.1| Zea mays CL3469_8 mRNA sequence
          Length = 586

 Score =  155 bits (78), Expect = 2e-34
 Identities = 145/169 (85%)
 Strand = Plus / Minus

                                                                       
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcaca 298
           |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacggtacttgatgaaaccaatgtccttggcgttgctgcggaagcactgcctgcagcaca 142

                                                                       
Query: 299 tcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatc 358
           | ||||||||||| | |||||| || |     ||  ||||||| ||||| || | ||| |
Sbjct: 141 tgagcccgtacttcctgatcagaccgtnnnnnttcgcgcagacccggcagacgcgggagc 82

                                                            
Query: 359 cggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           | |||||||||||||| |||||||||||||| ||||| ||||| |||||
Sbjct: 81  cagggccgtagttcttagggtgcgagttccaaacgttggagtggcccat 33
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  153 bits (77), Expect = 6e-34
 Identities = 95/101 (94%)
 Strand = Plus / Plus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 31739005 cttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcacatgagccc 31739064

                                                         
Query: 306      gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
                |||||| ||||||| |||||||| ||||||||| |||||||
Sbjct: 31739065 gtacttccggatcaagccatgcgggttgccgcaaacacggc 31739105



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                            
Query: 346      caaaccctggatccggggccgtagttcttggggtgcgagttccagacgttcgagtgtccc 405
                |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 31739363 caaaccctggatccggggccgtagttcttggggtgcgagttccacacgttggagtgtccc 31739422

                  
Query: 406      at 407
                ||
Sbjct: 31739423 at 31739424
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>gb|AC092781.6| Oryza sativa chromosome 3 BAC OSJNBb0094O03 genomic sequence, complete
             sequence
          Length = 134496

 Score =  153 bits (77), Expect = 6e-34
 Identities = 95/101 (94%)
 Strand = Plus / Plus

                                                                         
Query: 246   cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
             |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 64231 cttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcacatgagccc 64290

                                                      
Query: 306   gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
             |||||| ||||||| |||||||| ||||||||| |||||||
Sbjct: 64291 gtacttccggatcaagccatgcgggttgccgcaaacacggc 64331



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                         
Query: 346   caaaccctggatccggggccgtagttcttggggtgcgagttccagacgttcgagtgtccc 405
             |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 64589 caaaccctggatccggggccgtagttcttggggtgcgagttccacacgttggagtgtccc 64648

               
Query: 406   at 407
             ||
Sbjct: 64649 at 64650
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  153 bits (77), Expect = 6e-34
 Identities = 95/101 (94%)
 Strand = Plus / Plus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 31829521 cttgatgaagccaatgtccttggcgttgctgcggaagcactgcctgcagcacatgagccc 31829580

                                                         
Query: 306      gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
                |||||| ||||||| |||||||| ||||||||| |||||||
Sbjct: 31829581 gtacttccggatcaagccatgcgggttgccgcaaacacggc 31829621



 Score =  107 bits (54), Expect = 3e-20
 Identities = 60/62 (96%)
 Strand = Plus / Plus

                                                                            
Query: 346      caaaccctggatccggggccgtagttcttggggtgcgagttccagacgttcgagtgtccc 405
                |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 31829879 caaaccctggatccggggccgtagttcttggggtgcgagttccacacgttggagtgtccc 31829938

                  
Query: 406      at 407
                ||
Sbjct: 31829939 at 31829940
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>gb|DQ083212.1| Oryza sativa (indica cultivar-group) clone 7S11G34 mRNA sequence
          Length = 346

 Score =  121 bits (61), Expect = 2e-24
 Identities = 67/69 (97%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| 
Sbjct: 69  cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgtctgcagcacatg 10

                    
Query: 301 agcccgtac 309
           |||||||||
Sbjct: 9   agcccgtac 1
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 19578218 cttgatgaagccgatgtccttggcgttgctgcggaagcactgtctgcagcacatgagccc 19578159

                                     
Query: 306      gtacttgcggatcaggccatg 326
                |||||| | |||||| |||||
Sbjct: 19578158 gtacttcctgatcagtccatg 19578138



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 364      ccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
                ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19577550 ccgtagttcttggggtgggagttccacacgttggagtgccccat 19577507
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 19504431 cttgatgaagccgatgtccttggcgttgctgcggaagcactgtctgcagcacatgagccc 19504372

                                     
Query: 306      gtacttgcggatcaggccatg 326
                |||||| | |||||| |||||
Sbjct: 19504371 gtacttcctgatcagtccatg 19504351



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                            
Query: 364      ccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
                ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 19503763 ccgtagttcttggggtgggagttccacacgttggagtgccccat 19503720
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>emb|AL731759.2|CNS07YPA Oryza sativa chromosome 12, . BAC OSJNBa0009K11 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 144596

 Score =  121 bits (61), Expect = 2e-24
 Identities = 76/81 (93%)
 Strand = Plus / Minus

                                                                          
Query: 246    cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
              |||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||
Sbjct: 110399 cttgatgaagccgatgtccttggcgttgctgcggaagcactgtctgcagcacatgagccc 110340

                                   
Query: 306    gtacttgcggatcaggccatg 326
              |||||| | |||||| |||||
Sbjct: 110339 gtacttcctgatcagtccatg 110319



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                          
Query: 364    ccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
              ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 109731 ccgtagttcttggggtgggagttccacacgttggagtgccccat 109688
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>gb|AC118346.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0039F06, complete sequence
          Length = 133022

 Score =  113 bits (57), Expect = 5e-22
 Identities = 90/101 (89%)
 Strand = Plus / Plus

                                                                         
Query: 246   cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
             |||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 86375 cttgatgaagccaatatccttggcgttgctgcggaagcactgcctgcagcacatgagccc 86434

                                                      
Query: 306   gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
              ||||| | |||||| ||||| | ||| |||||||| ||||
Sbjct: 86435 atacttcctgatcagcccatgagggttcccgcagacccggc 86475



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Plus

                                                               
Query: 358   ccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
             ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 87330 ccgggcccgtagttcttggggtgggagttccacacgttggagtggcccat 87379
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  113 bits (57), Expect = 5e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 24119051 cttgatgaagccaatatccttggcgttgctgcggaagcactgcctgcagcacatgagccc 24118992

                                                         
Query: 306      gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
                 ||||| | |||||| ||||| | ||| |||||||| ||||
Sbjct: 24118991 atacttcctgatcagcccatgagggttcccgcagacccggc 24118951



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 358      ccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
                ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 24118096 ccgggcccgtagttcttggggtgggagttccacacgttggagtggcccat 24118047
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  113 bits (57), Expect = 5e-22
 Identities = 90/101 (89%)
 Strand = Plus / Minus

                                                                            
Query: 246      cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
                |||||||||||| || |||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 24430720 cttgatgaagccaatatccttggcgttgctgcggaagcactgcctgcagcacatgagccc 24430661

                                                         
Query: 306      gtacttgcggatcaggccatgcgagttgccgcagacacggc 346
                 ||||| | |||||| ||||| | ||| |||||||| ||||
Sbjct: 24430660 atacttcctgatcagcccatgagggttcccgcagacccggc 24430620



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 45/50 (90%)
 Strand = Plus / Minus

                                                                  
Query: 358      ccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
                ||||| ||||||||||||||||| |||||||| ||||| ||||| |||||
Sbjct: 24429765 ccgggcccgtagttcttggggtgggagttccacacgttggagtggcccat 24429716
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>gb|AY310769.1| Nicotiana benthamiana clone 8-039 unknown mRNA
          Length = 392

 Score =  101 bits (51), Expect = 2e-18
 Identities = 60/63 (95%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||||||||||||  | |||||||||||||||||||||||||||||||||||
Sbjct: 228 ttaacggtacttgatgaagccagtttccttggcgttgctgcggaagcactgcctgcagca 169

              
Query: 297 cat 299
           |||
Sbjct: 168 cat 166



 Score = 46.1 bits (23), Expect = 0.10
 Identities = 41/47 (87%)
 Strand = Plus / Minus

                                                          
Query: 361 gggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           |||||||||||||||||||| |  ||||||| ||| ||||| |||||
Sbjct: 104 gggccgtagttcttggggtgagcattccagatgttagagtgacccat 58
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>gb|AY389605.1| Hyacinthus orientalis ribosomal protein S29 (RPS29) mRNA, partial
           cds
          Length = 481

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 138/168 (82%), Gaps = 1/168 (0%)
 Strand = Plus / Minus

                                                                       
Query: 241 cggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatc 300
           |||||||| || ||||| || |||||||| ||||| ||||||||||||||||||||||| 
Sbjct: 220 cggtacttaataaagccaatttccttggcattgctacggaagcactgcctgcagcacata 161

                                                                       
Query: 301 agcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctggatccg 360
           || || ||||| || ||||  |||||||  ||||| || || ||||||   |  ||||| 
Sbjct: 160 agtccatacttccgaatcaaaccatgcggattgccacaaactcggcaagttcgagatcct 101

                                                           
Query: 361 gggccgtag-ttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||||||||| | |||||| ||||| ||||| ||||| |||||||||||
Sbjct: 100 gggccgtagctgcttgggatgcgaattccaaacgttggagtgtcccat 53
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>emb|Y16127.1|LES16127 Lycopersicon esculentum mRNA for hypothetical protein
          Length = 474

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 58/63 (92%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           ||||||||||||||||||||| || |||||||| ||||||||||||||||| ||||| ||
Sbjct: 224 ttaacggtacttgatgaagccaatttccttggcattgctgcggaagcactgtctgcaaca 165

              
Query: 297 cat 299
           |||
Sbjct: 164 cat 162
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>ref|NM_114266.1| Arabidopsis thaliana structural constituent of ribosome AT3G43980
           mRNA, complete cds
          Length = 400

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 247 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 188

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 187 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 128

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 127 tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 77
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>ref|NM_114269.2| Arabidopsis thaliana structural constituent of ribosome AT3G44010
           mRNA, complete cds
          Length = 483

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 239 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 180

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 179 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 129
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>gb|AF349528.1| Arabidopsis thaliana putative ribosomal S29 protein (At3g43980)
           mRNA, complete cds
          Length = 221

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 171 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 112

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 111 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 52

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 51  tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 1
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>gb|AF326888.1| Arabidopsis thaliana putative ribosomal S29 protein (At3g43980)
           mRNA, complete cds
          Length = 536

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 229 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 170

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 169 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 110

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 109 tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 59
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>gb|AY129480.1| Arabidopsis thaliana AT3g43980/T15B3_120 mRNA, complete cds
          Length = 171

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 171 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 112

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 111 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 52

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 51  tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 1
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>gb|AF361851.1| Arabidopsis thaliana AT3g43980/T15B3_120 mRNA, complete cds
          Length = 379

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 229 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 170

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 169 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 110

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 109 tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 59
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>gb|AF324695.2|AF324695 Arabidopsis thaliana AT3g43980 (AT3g43980/T15B3_120) mRNA, complete
           cds
          Length = 483

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 229 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 170

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 169 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 110

                                                              
Query: 357 tccggggccgtagttcttggggtgcgagttccagacgttcgagtgtcccat 407
           ||| || ||||| ||||| || || ||||||||||| || ||||| |||||
Sbjct: 109 tccaggaccgtacttcttcggatgagagttccagacattagagtgacccat 59
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>emb|BX826239.1|CNS0A7QD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL93ZC06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 360

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 191 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 132

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 131 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 81
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>emb|BX825142.1|CNS0A7PE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL15ZD07 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 459

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 215 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 156

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 155 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 105
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>emb|BX824534.1|CNS0A7RP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH54ZG05 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 394

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 224 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 165

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 164 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 114
to top
>gb|BT004344.1| Arabidopsis thaliana clone U20117 putative ribosomal protein S29
           (At3g44010) mRNA, complete cds
          Length = 202

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 171 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 112

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 111 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 61
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>gb|AY086767.1| Arabidopsis thaliana clone 2749 mRNA, complete sequence
          Length = 482

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 239 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 180

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 179 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 129
to top
>gb|BT002766.1| Arabidopsis thaliana clone RAFL15-04-A21 (R20117) putative
           ribosomal protein S29 (At3g44010) mRNA, complete cds
          Length = 421

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 93/111 (83%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 239 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 180

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 179 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 129
to top
>emb|BX822718.1|CNS0A7T6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB5ZC08 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 371

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 202 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 143
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>gb|AY088245.1| Arabidopsis thaliana clone 473 mRNA, complete sequence
          Length = 401

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 54/60 (90%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 248 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactgtctgcagca 189
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>emb|BX825609.1|CNS0A7QE Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL48ZG03 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 460

 Score = 69.9 bits (35), Expect = 7e-09
 Identities = 92/111 (82%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| |||||  |||||||
Sbjct: 215 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtttgcagca 156

                                                              
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggca 347
             |||  || ||||| |||||||| || |||||||| ||||| ||||||||
Sbjct: 155 gttcaaaccatacttccggatcagaccgtgcgagttcccgcacacacggca 105
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>ref|NM_119544.3| Arabidopsis thaliana structural constituent of ribosome AT4G33865
           mRNA, complete cds
          Length = 439

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 251 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 194
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>gb|AF325031.2|AF325031 Arabidopsis thaliana AT3g43980 (AT3g43980/T15B3_120) mRNA, complete
           cds
          Length = 420

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 248 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 191
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>emb|BX841605.1|CNS09YHD Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL66ZF11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 358

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 184 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 127
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>dbj|AK176861.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL25-41-O05
          Length = 359

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 212 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 155
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>dbj|AK176439.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL24-19-N14
          Length = 367

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK176332.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-32-J11
          Length = 385

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 253 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 196
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>dbj|AK176322.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-29-F01
          Length = 370

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK176295.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-24-M01
          Length = 368

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 218 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 161
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>dbj|AK176294.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL23-24-E02
          Length = 370

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK176060.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-80-C13
          Length = 407

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK175918.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-58-A09
          Length = 407

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 225 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 168
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>dbj|AK175739.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL22-28-I01
          Length = 407

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK175283.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-72-B11
          Length = 388

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK175173.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-59-B22
          Length = 359

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 212 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 155
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>dbj|AK175172.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-59-A02
          Length = 370

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 220 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 163
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>dbj|AK175152.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-57-E24
          Length = 423

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 236 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 179
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>dbj|AK175132.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL21-54-P17
          Length = 394

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 212 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 155
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>dbj|AK118617.1| Arabidopsis thaliana At4g33865 mRNA for putative ribosomal S29
           subunit, complete cds, clone: RAFL19-88-C17
          Length = 427

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 52/58 (89%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 269 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgcagca 212
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>emb|BX825823.1|CNS0A6FH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL65ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 412

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 125/156 (80%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| ||||| ||||||||||| |||||||| ||||  ||||||||
Sbjct: 175 ttaacggtacttaatgaatccgatctccttggcgttactgcggaaacactttctgcagca 116

                                                                       
Query: 297 catcagcccgtacttgcggatcaggccatgcgagttgccgcagacacggcaaaccctgga 356
             |||  || ||||| | ||| || || || ||||| ||||| |||||||| |  |  ||
Sbjct: 115 attcaaaccatacttcctgataagcccgtgtgagttcccgcacacacggcataaacgaga 56

                                               
Query: 357 tccggggccgtagttcttggggtgcgagttccagac 392
           ||| || ||||| ||||| || || |||||||||||
Sbjct: 55  tccaggaccgtacttcttcggatgagagttccagac 20
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>emb|BX828871.1|CNS0A3J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL45ZE11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 382

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| |||||  |||||||
Sbjct: 206 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtttgcagca 149
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>gb|AY086371.1| Arabidopsis thaliana clone 24629 mRNA, complete sequence
          Length = 423

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| | ||||||
Sbjct: 251 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtcggcagca 194
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>dbj|AK176815.1| Arabidopsis thaliana mRNA for ribosomal S29 subunit, complete cds,
           clone: RAFL25-36-M09
          Length = 496

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||| ||||| ||||| |||||||||||||| ||||| ||||| ||| ||||
Sbjct: 225 aacggtacttaatgaatccgatttccttggcgttgctacggaaacactgtctgtagca 168
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>ref|XM_426478.1| PREDICTED: Gallus gallus similar to ribosomal protein S29
           (LOC428924), mRNA
          Length = 522

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 246 cttgatgaagccgatgtccttggcgttgctgcggaagcactgcc 289
           ||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 162 cttgatgaagccgatgtccttggcgtactggcggaagcactgcc 119
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>emb|BX932172.1| Gallus gallus finished cDNA, clone ChEST468g22
          Length = 871

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 40/44 (90%)
 Strand = Plus / Minus

                                                       
Query: 246 cttgatgaagccgatgtccttggcgttgctgcggaagcactgcc 289
           ||||||||||||||||||||||||||    ||||||||||||||
Sbjct: 751 cttgatgaagccgatgtccttggcgtactggcggaagcactgcc 708
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>gb|DQ108688.1| Arabidopsis thaliana clone 107113 mRNA sequence
          Length = 393

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Minus

                                                                       
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
           |||||||||||| ||||| || || ||||| |||||||| ||||| ||||| ||||||||
Sbjct: 187 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactgtctgcagca 128
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>emb|AL163975.1|ATT15B3 Arabidopsis thaliana DNA chromosome 3, BAC clone T15B3
          Length = 114656

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 250   atgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
             ||||| ||||| ||||||||||| |||||||| ||||| ||||||||
Sbjct: 68323 atgaatccgatctccttggcgttactgcggaaacactgtctgcagca 68369
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>emb|AL161584.2|ATCHRIV80 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 80
          Length = 192861

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 250   atgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
             ||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 82516 atgaatccgatttccttggcgttgctacggaagcactgtctacagca 82470



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 250   atgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
             ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 67064 atgaatccgatttccttggcgttgctacggaaacactgtctgcagca 67110
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>emb|AL031032.1|ATF17I5 Arabidopsis thaliana DNA chromosome 4, BAC clone  F17I5 (ESSA project)
          Length = 86748

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Minus

                                                            
Query: 250   atgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
             ||||| ||||| |||||||||||||| ||||||||||| || |||||
Sbjct: 33492 atgaatccgatttccttggcgttgctacggaagcactgtctacagca 33446



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                            
Query: 250   atgaagccgatgtccttggcgttgctgcggaagcactgcctgcagca 296
             ||||| ||||| |||||||||||||| ||||| ||||| ||||||||
Sbjct: 18040 atgaatccgatttccttggcgttgctacggaaacactgtctgcagca 18086
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>emb|BX841514.1|CNS09YHL Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB28ZE07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 413

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Minus

                                                      
Query: 239 aacggtacttgatgaagccgatgtccttggcgttgctgcggaa 281
           |||||||||| ||||| ||||| |||||||||||||| |||||
Sbjct: 225 aacggtacttaatgaatccgatttccttggcgttgctacggaa 183
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>gb|DQ214468.1| Taeniopygia guttata clone 0058P0046G06 40S ribosomal protein
           S29-like mRNA, complete sequence
          Length = 386

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 246 cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
           ||||||||| ||||||||||||||||    |||||||||||||| |||     | |||||
Sbjct: 251 cttgatgaacccgatgtccttggcgtactggcggaagcactgccggcacatgttgagccc 192

                             
Query: 306 gtacttgcggatcaggcc 323
           |||||||||||| |||||
Sbjct: 191 gtacttgcggatgaggcc 174
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>gb|DQ214467.1| Taeniopygia guttata clone 0064P0002B10 40S ribosomal protein
           S29-like mRNA, complete sequence
          Length = 386

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                       
Query: 246 cttgatgaagccgatgtccttggcgttgctgcggaagcactgcctgcagcacatcagccc 305
           ||||||||| ||||||||||||||||    |||||||||||||| |||     | |||||
Sbjct: 251 cttgatgaacccgatgtccttggcgtactggcggaagcactgccggcacatgttgagccc 192

                             
Query: 306 gtacttgcggatcaggcc 323
           |||||||||||| |||||
Sbjct: 191 gtacttgcggatgaggcc 174
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>gb|DQ108844.1| Arabidopsis thaliana clone 32764 mRNA sequence
          Length = 347

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 44/51 (86%)
 Strand = Plus / Minus

                                                              
Query: 237 ttaacggtacttgatgaagccgatgtccttggcgttgctgcggaagcactg 287
           |||||||||||| ||||| || || ||||| |||||||| ||||| |||||
Sbjct: 182 ttaacggtacttaatgaatccaatctccttagcgttgctacggaaacactg 132
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>gb|DQ214470.1| Taeniopygia guttata clone 0058P0004E08 40S ribosomal protein
           S29-like mRNA, complete sequence
          Length = 352

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 246 cttgatgaagccgatgtccttggcgt 271
           ||||||||| ||||||||||||||||
Sbjct: 217 cttgatgaacccgatgtccttggcgt 192
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>gb|DQ214469.1| Taeniopygia guttata clone 0058P0009G02 40S ribosomal protein
           S29-like mRNA, complete sequence
          Length = 351

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 246 cttgatgaagccgatgtccttggcgt 271
           ||||||||| ||||||||||||||||
Sbjct: 217 cttgatgaacccgatgtccttggcgt 192
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>emb|Z79602.1|CEK09E9 Caenorhabditis elegans Cosmid K09E9, complete sequence
          Length = 30098

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 130   aacagtagttcattacatagt 150
             |||||||||||||||||||||
Sbjct: 27625 aacagtagttcattacatagt 27645
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>emb|CR931730.1| Medicago truncatula chromosome 5 clone  mth2-17o15, COMPLETE
           SEQUENCE
          Length = 89342

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 33/37 (89%)
 Strand = Plus / Minus

                                                
Query: 371 tcttggggtgcgagttccagacgttcgagtgtcccat 407
           |||||||||| ||||||||||| || ||||| |||||
Sbjct: 166 tcttggggtgagagttccagacattggagtgacccat 130
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>gb|L24003.1|TOMTRALTAC Lycopersicon esculentum (DB113) meloidogyne-induced giant cell
           protein mRNA, 3' end
          Length = 210

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 237 ttaacggtacttgatgaagcc 257
           |||||||||||||||||||||
Sbjct: 29  ttaacggtacttgatgaagcc 9
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>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete
              sequence
          Length = 1347793

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 291    gcagcacatcagcccgtact 310
              ||||||||||||||||||||
Sbjct: 515733 gcagcacatcagcccgtact 515752
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>emb|BX530066.21| Zebrafish DNA sequence from clone DKEY-48C13 in linkage group 24,
              complete sequence
          Length = 202859

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 66     ttcagatgctcaaacagcagtcac 89
              ||||||||||||||||||| ||||
Sbjct: 134438 ttcagatgctcaaacagcattcac 134461
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>emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 map 22q22.3, complete
             sequence
          Length = 149587

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    cagcagtcaccaacatggtt 99
             ||||||||||||||||||||
Sbjct: 19261 cagcagtcaccaacatggtt 19242
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>emb|AL954250.1| Pan troglodytes chromosome 22 clone RP43-013I15 map 22q22.3, complete
              sequence
          Length = 192447

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 80     cagcagtcaccaacatggtt 99
              ||||||||||||||||||||
Sbjct: 181383 cagcagtcaccaacatggtt 181364
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>gb|AE011988.1| Xanthomonas axonopodis pv. citri str. 306,  section 366 of 469 of the
            complete genome
          Length = 11904

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 317  tcaggccatgcgagttgccgcaga 340
            |||||||||||| |||||||||||
Sbjct: 3479 tcaggccatgcgggttgccgcaga 3456
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>gb|AE012444.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 352
            of 460 of the complete genome
          Length = 12739

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 317  tcaggccatgcgagttgccgcaga 340
            |||||||||||| |||||||||||
Sbjct: 6894 tcaggccatgcgggttgccgcaga 6871
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>gb|DQ401084.1| Chlamydomonas sp. ICE-L ribosomal protein S29 subunit mRNA,
           complete cds
          Length = 735

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 362 ggccgtagttcttggggtgcgagttccagacg 393
           |||||||||||||||||||   ||||||||||
Sbjct: 95  ggccgtagttcttggggtggctgttccagacg 64
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>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 317     tcaggccatgcgagttgccgcaga 340
               |||||||||||| |||||||||||
Sbjct: 1073461 tcaggccatgcgggttgccgcaga 1073484
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>gb|AC093596.3| Homo sapiens BAC clone RP11-98M12 from 4, complete sequence
          Length = 152347

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 213    ttgcttcctttgaggtttccattc 236
              |||||||| |||||||||||||||
Sbjct: 109073 ttgcttccattgaggtttccattc 109050
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 255    gccgatgtccttggcgttgctgcggaag 282
              |||| |||||||||||||| ||||||||
Sbjct: 982130 gccggtgtccttggcgttgatgcggaag 982103
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>gb|AY357068.1| Hippocampus comes 40S ribosomal protein S29 mRNA, complete cds
          Length = 315

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 252 gaagccgatgtccttggcgt 271
           ||||||||||||||||||||
Sbjct: 176 gaagccgatgtccttggcgt 157
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>gb|CP000102.1| Methanosphaera stadtmanae DSM 3091, complete genome
          Length = 1767403

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 66     ttcagatgctcaaacagcagtcac 89
              ||||||||||||||||||| ||||
Sbjct: 191815 ttcagatgctcaaacagcaatcac 191838
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>gb|U50465.1|OCU50465 Oryctolagus cuniculus cardiac ryanodine receptor (RyR-2) mRNA, complete
             cds
          Length = 16536

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tgaagccgatgtccttggcg 270
             ||||||||||||||||||||
Sbjct: 12602 tgaagccgatgtccttggcg 12583
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>gb|M59743.1|RABCA2RE Rabbit cardiac muscle Ca-2+ release channel (ryanodine receptor) mRNA,
             complete cds
          Length = 16525

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 251   tgaagccgatgtccttggcg 270
             ||||||||||||||||||||
Sbjct: 12592 tgaagccgatgtccttggcg 12573


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,110,473
Number of Sequences: 3902068
Number of extensions: 3110473
Number of successful extensions: 53460
Number of sequences better than 10.0: 88
Number of HSP's better than 10.0 without gapping: 87
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 53170
Number of HSP's gapped (non-prelim): 278
length of query: 470
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 448
effective length of database: 17,147,199,772
effective search space: 7681945497856
effective search space used: 7681945497856
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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