ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbasd11o15 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009584.1| Triticum aestivum clone wre1n.pk0044.b2:fis, full insert mRNA sequence Length = 876 Score = 837 bits (422), Expect = 0.0 Identities = 476/494 (96%) Strand = Plus / Minus Query: 210 gtcagaactccttacgcgagctctataacaagtgcagatgcaccgccaccgccgttgcag 269 |||||| |||||||||| ||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 666 gtcagagctccttacgccagctccataacgagcgcagatgcaccgccaccgccgttgcag 607 Query: 270 acaccagcaactccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaa 329 ||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||| Sbjct: 606 acaccagcaactccgatcttgccactcttctccctaagaacaccgagaagggtgaccaaa 547 Query: 330 atgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacattt 389 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 546 atgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacattt 487 Query: 390 atcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgct 449 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||| Sbjct: 486 atcttttctgaaggaattccgagaagcttttgatttgcaagtgcaacagccgaaaaggct 427 Query: 450 tcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtgagagccttc 509 ||||| |||||||||||||||| |||||||||||||||||||||||| |||||||||||| Sbjct: 426 tcattgatttcataaaaatcaatacgagaggactctaggccagcatttgtgagagccttc 367 Query: 510 ggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagcaaat 569 |||||||||||||||||||||||||||||||||||||||||||||||||| || |||||| Sbjct: 366 ggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcatcggcaaat 307 Query: 570 cccttgatccttgcaaggacttgcaatccaagttcttgagccttctttccactcaccaat 629 ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 306 cccttaatccttgcaaggacttgcaatccaagttcttgagccttcttcccactcaccaat 247 Query: 630 actaatgctgcagcgccatcacttatactagaagcatttccagcagtaacagtaccagca 689 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 246 actaatgctgcagcaccatcacttatactagaagcatttccagcagtaacagtaccagca 187 Query: 690 ttttccttgaatgc 703 || ||||||||||| Sbjct: 186 ttctccttgaatgc 173 Score = 125 bits (63), Expect = 2e-25 Identities = 115/131 (87%), Gaps = 1/131 (0%) Strand = Plus / Minus Query: 14 aaaacagctacaccagaaaataaaagaacaataaccttgagtaagatcagaaaccggcac 73 |||||||||||| ||||||| |||| || || || |||||||||||||||||||||| Sbjct: 814 aaaacagctacaacagaaaagaaaattgaaacaatctagagtaagatcagaaaccggcac 755 Query: 74 aggagttctaagttaaccaattacttaatctggcacagcactatcaaatgcagtac-tag 132 | ||||||||||||| ||||||||||||||| ||||||||||| |||| |||||| ||| Sbjct: 754 acaagttctaagttaatcaattacttaatctgacacagcactatgaaatacagtacatag 695 Query: 133 aattttacatg 143 ||||||||||| Sbjct: 694 aattttacatg 684 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gcaggctccatctttggtgt 199 |||||||||||||||||||| Sbjct: 684 gcaggctccatctttggtgt 665
>ref|XM_450298.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1689 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 302 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1322 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1263 Query: 303 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 362 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1262 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1203 Query: 363 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 422 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1202 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 1143 Query: 423 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 482 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 1142 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 1083 Query: 483 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 542 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 1082 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 1023 Query: 543 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 602 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 1022 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 963 Query: 603 tcttgagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaa 662 ||||| ||||||| |||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 962 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactagaa 903 Query: 663 gcatttccagcagtaacagtaccagcattttccttgaa 700 ||||| |||||||||||||||||| |||| |||||||| Sbjct: 902 gcattcccagcagtaacagtaccaccattctccttgaa 865
>dbj|AK102536.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096I21, full insert sequence Length = 1689 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 302 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1322 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1263 Query: 303 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 362 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1262 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1203 Query: 363 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 422 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1202 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 1143 Query: 423 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 482 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 1142 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 1083 Query: 483 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 542 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 1082 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 1023 Query: 543 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 602 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 1022 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 963 Query: 603 tcttgagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaa 662 ||||| ||||||| |||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 962 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactagaa 903 Query: 663 gcatttccagcagtaacagtaccagcattttccttgaa 700 ||||| |||||||||||||||||| |||| |||||||| Sbjct: 902 gcattcccagcagtaacagtaccaccattctccttgaa 865
>dbj|AK059654.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-C10, full insert sequence Length = 1609 Score = 527 bits (266), Expect = e-146 Identities = 410/458 (89%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 302 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 1148 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 1089 Query: 303 ctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcct 362 |||||||||||||| |||||||||||||| |||||||||||||| ||||| || |||||| Sbjct: 1088 ctaagaacaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcct 1029 Query: 363 aaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttga 422 ||||| |||||||||||||||||||| || |||||||||||||| || |||||||||||| Sbjct: 1028 aaagacacagctcctccatgtacattaattttttctgaaggaattccaagaagcttttga 969 Query: 423 tttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacgagaggac 482 ||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||| Sbjct: 968 tttgcaagtgcaacagctgaaaaggcttcattaatttcatagtaatcaacacgagaagac 909 Query: 483 tctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggtaaatagt 542 || | ||||||||| | |||||||| |||||||||||||| ||| |||||||||||| | Sbjct: 908 tccaagccagcattagcaagagccttaggtatggcaagtgccgggctagtggtaaataat 849 Query: 543 tcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagt 602 ||||||||||| ||||| || |||||||| ||||| | ||||| ||||||| ||||||| Sbjct: 848 tcaggagcttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagt 789 Query: 603 tcttgagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaa 662 ||||| ||||||| |||||||||||||||||||| ||||| || ||||||||||||||| Sbjct: 788 tcttgtgccttctgcccactcaccaatactaatgcggcagcaccgtcacttatactagaa 729 Query: 663 gcatttccagcagtaacagtaccagcattttccttgaa 700 ||||| |||||||||||||||||| |||| |||||||| Sbjct: 728 gcattcccagcagtaacagtaccaccattctccttgaa 691
>gb|AY103699.1| Zea mays PCO140839 mRNA sequence Length = 1749 Score = 470 bits (237), Expect = e-129 Identities = 408/465 (87%) Strand = Plus / Minus Query: 236 aacaagtgcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacc 295 |||||| || ||||| || || ||||||||||||||||||||||| ||||||||||| || Sbjct: 1397 aacaagagctgatgctccacctccgccgttgcagacaccagcaacaccgatcttgccgcc 1338 Query: 296 cttctccctaagaacaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgg 355 ||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| || Sbjct: 1337 cttttccctaaggacaccaagaagggtgaccaaaatgcgagcaccgctgcacccaagagg 1278 Query: 356 gtgtcctaaagatacagctcctccatgtacatttatcttttctgaaggaatcccgagaag 415 || |||| ||| |||||||||||||| ||||| |||||||||||||||||||| ||||| Sbjct: 1277 atgccctagagacacagctcctccatggacattaatcttttctgaaggaatcccaagaag 1218 Query: 416 cttttgatttgcaagtgcaacagccgaaaatgcttcattaatttcataaaaatcaacacg 475 |||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||||||| | Sbjct: 1217 cttttgatttgcaagtgcgacagcagaaaatgcttcattaatctcaaaaaaatcaacatg 1158 Query: 476 agaggactctaggccagcattcgtgagagccttcggtatggcaagtgctggggtagtggt 535 || ||||||| |||||||| | | |||||| ||||| |||||||||||||| || || Sbjct: 1157 ggatgactctaatccagcatttgatatagcctttggtatcgcaagtgctggggtggttgt 1098 Query: 536 aaatagttcaggagcttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaa 595 ||| ||||| |||||||| || || || ||| |||| ||||||||||||||||||||| Sbjct: 1097 aaaaagttccggagcttgagccgcatctgcatatcctctgatccttgcaaggacttgcag 1038 Query: 596 tccaagttcttgagccttctttccactcaccaatactaatgctgcagcgccatcacttat 655 ||||| ||||||||||||| ||||||||||| |||||||| || || ||||||||||| Sbjct: 1037 gccaagctcttgagccttctgcccactcaccaaaactaatgcagccgccccatcacttat 978 Query: 656 actagaagcatttccagcagtaacagtaccagcattttccttgaa 700 |||||||||||||||||| ||||| |||||| |||| |||||||| Sbjct: 977 actagaagcatttccagctgtaacggtaccaccattctccttgaa 933
>gb|AF113522.1|AF113522 Zea mays cultivar TX-5855 acetoacetyl CoA thiolase mRNA, partial cds Length = 971 Score = 466 bits (235), Expect = e-128 Identities = 391/443 (88%) Strand = Plus / Minus Query: 258 ccgccgttgcagacaccagcaactccgatcttgccacccttctccctaagaacaccaaga 317 ||||||||||||||||||||||| ||||||||||| ||||| |||||||| ||||||||| Sbjct: 579 ccgccgttgcagacaccagcaacaccgatcttgccgcccttttccctaaggacaccaaga 520 Query: 318 agggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcct 377 ||||||||||||||||||||||| ||||||||||| || || |||| ||| ||||||||| Sbjct: 519 agggtgaccaaaatgcgagcaccgctgcacccaagaggatgccctagagacacagctcct 460 Query: 378 ccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaaca 437 ||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||| ||| Sbjct: 459 ccatggacattaatcttttctgaaggaatcccaagaagcttttgatttgcaagtgcgaca 400 Query: 438 gccgaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattc 497 || ||||||||||||||||| ||| ||||||||||| | || ||||||| |||||||| Sbjct: 399 gcagaaaatgcttcattaatctcaaaaaaatcaacatgggatgactctaatccagcattt 340 Query: 498 gtgagagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggct 557 | | |||||| ||||| |||||||||||||| || ||||| ||||| |||||||| || Sbjct: 339 gatatagcctttggtatcgcaagtgctggggtggttgtaaaaagttccggagcttgagcc 280 Query: 558 gcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgagccttcttt 617 || || ||| |||| ||||||||||||||||||||| ||||| ||||||||||||| Sbjct: 279 gcatctgcatatcctctgatccttgcaaggacttgcaggccaagctcttgagccttctgc 220 Query: 618 ccactcaccaatactaatgctgcagcgccatcacttatactagaagcatttccagcagta 677 ||||||||||| |||||||| || || ||||||||||||||||||||||||||||| ||| Sbjct: 219 ccactcaccaaaactaatgcagccgccccatcacttatactagaagcatttccagctgta 160 Query: 678 acagtaccagcattttccttgaa 700 || |||||| |||| |||||||| Sbjct: 159 acggtaccaccattctccttgaa 137
>gb|BT018966.1| Zea mays clone Contig360.F mRNA sequence Length = 1615 Score = 438 bits (221), Expect = e-119 Identities = 416/481 (86%) Strand = Plus / Minus Query: 220 cttacgcgagctctataacaagtgcagatgcaccgccaccgccgttgcagacaccagcaa 279 |||| |||||||| | |||||| || ||||| || || || ||||||||||||||||||| Sbjct: 1339 cttatgcgagctccagaacaagagctgatgctccccctcccccgttgcagacaccagcaa 1280 Query: 280 ctccgatcttgccacccttctccctaagaacaccaagaagggtgaccaaaatgcgagcac 339 |||| || ||||||| |||| |||| |||||||||| |||||| |||||||||||||||| Sbjct: 1279 ctcccattttgccactcttcgccctgagaacaccaataagggtaaccaaaatgcgagcac 1220 Query: 340 cactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttctg 399 | |||| ||| || || |||||||||||||||||||| ||||| ||||| |||||||||| Sbjct: 1219 ccctgcccccgagaggatgtcctaaagatacagctcccccatgaacattaatcttttctg 1160 Query: 400 aaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaattt 459 ||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||| | Sbjct: 1159 aaggaattccaagaagcttttgatttgcaagtgcaacagccgaaaaggcttcattaatct 1100 Query: 460 cataaaaatcaacacgagaggactctaggccagcattcgtgagagccttcggtatggcaa 519 |||| ||||||||| | || ||||||| || ||||| | || |||||| ||||| |||| Sbjct: 1099 catagaaatcaacatgggatgactctaatcccgcatttgcgatagcctttggtattgcaa 1040 Query: 520 gtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagcaaatcccttgatcc 579 ||||||| || || ||||| || || |||||||| ||||| |||||| | || ||||||| Sbjct: 1039 gtgctggagtggttgtaaaaagctccggagcttgagctgcatcagcataacctttgatcc 980 Query: 580 ttgcaaggacttgcaatccaagttcttgagccttctttccactcaccaatactaatgctg 639 ||||||||||||| | |||| ||||||||||||| |||||||||||| |||||||| | Sbjct: 979 ttgcaaggacttgaagggcaagctcttgagccttctgtccactcaccaaaactaatgcag 920 Query: 640 cagcgccatcacttatactagaagcatttccagcagtaacagtaccagcattttccttga 699 |||| || |||||||||||||||||||||||||| ||||| |||||| |||| ||||||| Sbjct: 919 cagctccctcacttatactagaagcatttccagctgtaactgtaccatcattctccttga 860 Query: 700 a 700 | Sbjct: 859 a 859
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 441 gaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtg 500 ||||| ||||||||||||||||| ||||||||||||| ||||| | ||||||||| | Sbjct: 3920354 gaaaaggcttcattaatttcatagtaatcaacacgagaagactccaagccagcattagca 3920295 Query: 501 agagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagc 550 |||||||| |||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 3920294 agagccttaggtatggcaagtgccgggctagtggtaaataattcaggagc 3920245 Score = 113 bits (57), Expect = 8e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 309 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 368 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 3920759 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 3920700 Query: 369 acagctcctccatgtacatttatcttttc 397 |||||||||||||||||||| || ||||| Sbjct: 3920699 acagctcctccatgtacattaattttttc 3920671 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 302 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 3921080 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 3921021 Query: 303 ctaagaac 310 |||||||| Sbjct: 3921020 ctaagaac 3921013 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 550 cttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgag 609 |||| ||||| || |||||||| ||||| | ||||| ||||||| |||||||||||| | Sbjct: 3920039 cttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagttcttgtg 3919980 Query: 610 ccttctttccactcaccaatactaatgctgcagcgccatcact 652 |||||| |||||||||||||||||||| ||||| || ||||| Sbjct: 3919979 ccttctgcccactcaccaatactaatgcggcagcaccgtcact 3919937 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 651 cttatactagaagcatttccagcagtaacagtaccagcattttccttgaa 700 ||||||||||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 3919298 cttatactagaagcattcccagcagtaacagtaccaccattctccttgaa 3919249 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 397 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 440 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 3920499 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 3920456
>dbj|AP005590.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0574F11 Length = 159891 Score = 115 bits (58), Expect = 2e-22 Identities = 97/110 (88%) Strand = Plus / Minus Query: 441 gaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtg 500 ||||| ||||||||||||||||| ||||||||||||| ||||| | ||||||||| | Sbjct: 51866 gaaaaggcttcattaatttcatagtaatcaacacgagaagactccaagccagcattagca 51807 Query: 501 agagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagc 550 |||||||| |||||||||||||| ||| |||||||||||| ||||||||| Sbjct: 51806 agagccttaggtatggcaagtgccgggctagtggtaaataattcaggagc 51757 Score = 113 bits (57), Expect = 8e-22 Identities = 81/89 (91%) Strand = Plus / Minus Query: 309 acaccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagat 368 |||||||| |||||||||||||| |||||||||||||| ||||| || ||||||||||| Sbjct: 52271 acaccaagcagggtgaccaaaattcgagcaccactgcatccaagaggatgtcctaaagac 52212 Query: 369 acagctcctccatgtacatttatcttttc 397 |||||||||||||||||||| || ||||| Sbjct: 52211 acagctcctccatgtacattaattttttc 52183 Score = 87.7 bits (44), Expect = 5e-14 Identities = 62/68 (91%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccgatcttgccacccttctcc 302 |||||||| ||||| ||||| ||||| ||||||||||||||||| |||||||| |||||| Sbjct: 52592 gcagatgctccgcctccgccattgcaaacaccagcaactccgattttgccacctttctcc 52533 Query: 303 ctaagaac 310 |||||||| Sbjct: 52532 ctaagaac 52525 Score = 85.7 bits (43), Expect = 2e-13 Identities = 88/103 (85%) Strand = Plus / Minus Query: 550 cttgggctgcgtcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgag 609 |||| ||||| || |||||||| ||||| | ||||| ||||||| |||||||||||| | Sbjct: 51551 cttgagctgcatctgcaaatcctttgattcgtgcaataacttgcagtccaagttcttgtg 51492 Query: 610 ccttctttccactcaccaatactaatgctgcagcgccatcact 652 |||||| |||||||||||||||||||| ||||| || ||||| Sbjct: 51491 ccttctgcccactcaccaatactaatgcggcagcaccgtcact 51449 Score = 75.8 bits (38), Expect = 2e-10 Identities = 47/50 (94%) Strand = Plus / Minus Query: 651 cttatactagaagcatttccagcagtaacagtaccagcattttccttgaa 700 ||||||||||||||||| |||||||||||||||||| |||| |||||||| Sbjct: 50810 cttatactagaagcattcccagcagtaacagtaccaccattctccttgaa 50761 Score = 71.9 bits (36), Expect = 3e-09 Identities = 42/44 (95%) Strand = Plus / Minus Query: 397 ctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 440 |||||||||| || |||||||||||||||||||||||||||||| Sbjct: 52011 ctgaaggaattccaagaagcttttgatttgcaagtgcaacagcc 51968
>gb|AY748246.1| Nicotiana tabacum peroxisomal acetoacetyl-coenzyme A thiolase (AACT2) mRNA, complete cds Length = 1522 Score = 107 bits (54), Expect = 5e-20 Identities = 204/254 (80%) Strand = Plus / Minus Query: 447 gcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtgagagcc 506 |||||||| ||||||||| | |||| |||| ||||| ||||||| |||| | | || Sbjct: 1106 gcttcatttatttcataatagtcaatttgagatgactcaaggccagaattcttaattgct 1047 Query: 507 ttcggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcgtcagca 566 || ||||| ||||| ||||| | || ||||||| ||||| || || ||||| || ||| Sbjct: 1046 tttggtattgcaagagctggagctgttgtaaataactcaggtgcctgagctgcatctgca 987 Query: 567 aatcccttgatccttgcaaggacttgcaatccaagttcttgagccttctttccactcacc 626 ||||| ||||||| ||| ||||||||||||||||| | ||||| | |||||||||| Sbjct: 986 aatcctctgatcctaccaattacttgcaatccaagttcaagtgccttttgtccactcacc 927 Query: 627 aatactaatgctgcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 | ||||||||||||||||||||||||||| | |||||||| || ||||| |||| ||| Sbjct: 926 agaactaatgctgcagcgccatcacttataatggaagcattgcctgcagtgacagaacct 867 Query: 687 gcattttccttgaa 700 |||| |||||||| Sbjct: 866 ccattctccttgaa 853
>gb|AF429383.1|AF429383 Hevea brasiliensis acetyl Co-A acetyltransferase mRNA, complete cds Length = 1669 Score = 93.7 bits (47), Expect = 7e-16 Identities = 281/359 (78%) Strand = Plus / Minus Query: 321 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 380 |||||||| || ||||| |||||||| || | ||| ||||| |||||||||||||||||| Sbjct: 1263 gtgaccaagatacgagctccactgcatcctaatggatgtcccaaagatacagctcctcca 1204 Query: 381 tgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagtgcaacagcc 440 || ||||||| ||||| | | || || || | ||||||||| ||||| || ||| | Sbjct: 1203 tgaacatttaatttttcaggattaagaccaagtatcttttgattggcaagggccacaaca 1144 Query: 441 gaaaatgcttcattaatttcataaaaatcaacacgagaggactctaggccagcattcgtg 500 |||||||||||||| ||||||||| |||||| | || | ||| | |||||||| | Sbjct: 1143 gaaaatgcttcatttatttcataataatcaatctgggaagcctccaacccagcatttgaa 1084 Query: 501 agagccttcggtatggcaagtgctggggtagtggtaaatagttcaggagcttgggctgcg 560 | ||| || ||||| ||||||||||| | || ||||||| ||||| || || || || Sbjct: 1083 atagcttttggtatcgcaagtgctggtgctgttgtaaataactcaggggcctgagcagca 1024 Query: 561 tcagcaaatcccttgatccttgcaaggacttgcaatccaagttcttgagccttctttcca 620 ||| || |||| | ||||| |||| |||||||||||||| || ||||| | ||| Sbjct: 1023 tcaccatatcctcttatcctagcaatcacttgcaatccaagctcaattgccttttctccg 964 Query: 621 ctcaccaatactaatgctgcagcgccatcacttatactagaagcatttccagcagtaac 679 ||||||| |||||||| || || ||||||||||| |||||||||||||||| ||||| Sbjct: 963 ctcaccaggactaatgcagctgcaccatcacttatgatagaagcatttccagctgtaac 905
>ref|NM_180823.1| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.1 mRNA, complete cds Length = 1731 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1148 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1089 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1088 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1029 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 1028 tcatagtaatcaac 1015 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagt 682 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 842 ccatcacttatgctagacgcatttccagctgtaacagt 805
>ref|NM_124198.2| Arabidopsis thaliana EMB1276; acetyl-CoA C-acetyltransferase AT5G48230 (EMB1276) transcript variant AT5G48230.2 mRNA, complete cds Length = 1993 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1410 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1351 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1350 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1291 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 1290 tcatagtaatcaac 1277 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagt 682 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 1104 ccatcacttatgctagacgcatttccagctgtaacagt 1067
>gb|AY091271.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1228 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1079 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1020 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1019 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 960 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 959 tcatagtaatcaac 946 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagt 682 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 773 ccatcacttatgctagacgcatttccagctgtaacagt 736
>gb|AY059736.1| Arabidopsis thaliana putative acetyl-CoA C-acetyltransferase (At5g48230) mRNA, complete cds Length = 1531 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1150 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1091 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1090 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1031 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 1030 tcatagtaatcaac 1017 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagt 682 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 844 ccatcacttatgctagacgcatttccagctgtaacagt 807
>gb|AF364059.1| Arabidopsis thaliana acetoacetyl-CoA thiolase (AAT1) mRNA, complete cds Length = 1736 Score = 91.7 bits (46), Expect = 3e-15 Identities = 112/134 (83%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || ||||||||||| || ||||||||||||| ||| || | || ||| Sbjct: 1281 ccactgcagcctagagggtgtcctaaggagacagctcctccatttacgttcactttctct 1222 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | || ||||||||| |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1221 ggagcaatcccgagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1162 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 1161 tcatagtaatcaac 1148 Score = 52.0 bits (26), Expect = 0.003 Identities = 35/38 (92%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagt 682 ||||||||||| ||||| ||||||||||| |||||||| Sbjct: 975 ccatcacttatgctagacgcatttccagctgtaacagt 938
>gb|AY748245.1| Nicotiana tabacum cytosolic acetoacetyl-coenzyme A thiolase (AACT1) mRNA, complete cds Length = 1455 Score = 79.8 bits (40), Expect = 1e-11 Identities = 124/152 (81%) Strand = Plus / Minus Query: 312 ccaagaagggtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagataca 371 |||||||| || ||||| || ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 1142 ccaagaagtgtaaccaatatacgagctccactgcatccaagagggtgccccaaagataca 1083 Query: 372 gctcctccatgtacatttatcttttctgaaggaatcccgagaagcttttgatttgcaagt 431 ||||| ||||||||||| | ||||||| | || || || ||||||||||||||||| Sbjct: 1082 gctccaccatgtacattaactttttctggattaagaccaagcagcttttgatttgcaaga 1023 Query: 432 gcaacagccgaaaatgcttcattaatttcata 463 | || | | ||| ||||||||||||||||| Sbjct: 1022 gataccacagcaaaagcttcattaatttcata 991 Score = 73.8 bits (37), Expect = 7e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 609 gccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcattt 668 ||||||| |||||| || || || ||||| ||||| ||||||||||| |||||||| || Sbjct: 845 gccttctctccacttactaagaccaatgcagcagctccatcacttatgctagaagcgtta 786 Query: 669 ccagcagtaacagtaccagcattttcctt 697 |||||||| ||||||||| | |||||||| Sbjct: 785 ccagcagtcacagtaccatccttttcctt 757
>emb|X78116.1|RSLAACT R.sativus L. (Saxa knacker) AACT mRNA Length = 1462 Score = 67.9 bits (34), Expect = 4e-08 Identities = 109/134 (81%) Strand = Plus / Minus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccatgtacatttatcttttct 398 |||||||| || || || |||||||| || || |||||||||| |||||| | ||| || Sbjct: 1145 ccactgcagcctagaggatgtcctaaggagacggctcctccatttacattcaccttctcc 1086 Query: 399 gaaggaatcccgagaagcttttgatttgcaagtgcaacagccgaaaatgcttcattaatt 458 | | |||||| || |||||||||||||||||||| ||| | | |||||||||||| || Sbjct: 1085 ggactaatcccaagtagcttttgatttgcaagtgctacaactgcaaatgcttcattgatc 1026 Query: 459 tcataaaaatcaac 472 ||||| ||||||| Sbjct: 1025 tcatagtaatcaac 1012 Score = 48.1 bits (24), Expect = 0.039 Identities = 48/56 (85%) Strand = Plus / Minus Query: 645 ccatcacttatactagaagcatttccagcagtaacagtaccagcattttccttgaa 700 ||||||||||| ||||| ||||||||||| ||||| || || |||| |||||||| Sbjct: 833 ccatcacttatgctagaggcatttccagctgtaactgtgcctccattctccttgaa 778
>gb|DQ195208.1| Clostridium pasteurianum strain W5 thiolase (thl) gene, complete cds Length = 1179 Score = 61.9 bits (31), Expect = 3e-06 Identities = 46/51 (90%) Strand = Plus / Minus Query: 636 gctgcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 |||||||| |||||| |||||| ||||||||||||||||| ||||||||| Sbjct: 767 gctgcagctccatcatttatacctgaagcatttccagcagttacagtacca 717
>ref|NM_203172.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.4 mRNA, complete cds Length = 2029 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 924 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 865 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 864 ttccagcagt 855
>ref|NM_001036951.1| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.5 mRNA, complete cds Length = 2167 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 1062 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 1003 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 1002 ttccagcagt 993
>ref|NM_180819.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.1 mRNA, complete cds Length = 2054 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 949 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 890 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 889 ttccagcagt 880
>ref|NM_203171.1| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.3 mRNA, complete cds Length = 1986 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 881 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 822 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 821 ttccagcagt 812
>ref|NM_124146.2| Arabidopsis thaliana acetyl-CoA C-acetyltransferase AT5G47720 transcript variant AT5G47720.2 mRNA, complete cds Length = 1447 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 904 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 845 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 844 ttccagcagt 835
>gb|AF411795.1|AF411795 Arabidopsis thaliana AT5g47720/MCA23_4 mRNA sequence Length = 1492 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 948 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 889 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 888 ttccagcagt 879
>emb|BX831231.1|CNS0A1WG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS6ZD09 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1392 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 860 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 801 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 800 ttccagcagt 791
>emb|BX830943.1|CNS0A1NZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZE08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1417 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 904 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 845 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 844 ttccagcagt 835
>emb|BX831798.1|CNS09ZQ5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH30ZA02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1386 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 881 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 822 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 821 ttccagcagt 812
>emb|BX830740.1|CNS09ZD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS19ZD08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1449 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 934 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 875 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 874 ttccagcagt 865
>emb|BX833935.1|CNS09Z84 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL84ZC10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1365 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 903 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 844 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 843 ttccagcagt 834
>gb|AY088740.1| Arabidopsis thaliana clone 93821 mRNA, complete sequence Length = 1444 Score = 60.0 bits (30), Expect = 1e-05 Identities = 60/70 (85%) Strand = Plus / Minus Query: 607 gagccttctttccactcaccaatactaatgctgcagcgccatcacttatactagaagcat 666 ||||||||| ||||||||| | ||||| ||||| || ||||||||||| || || |||| Sbjct: 901 gagccttctctccactcactagcactaacgctgccgcaccatcacttatgcttgatgcat 842 Query: 667 ttccagcagt 676 |||||||||| Sbjct: 841 ttccagcagt 832
>gb|AY105770.1| Zea mays PCO104693 mRNA sequence Length = 1879 Score = 56.0 bits (28), Expect = 2e-04 Identities = 43/48 (89%) Strand = Plus / Minus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 ||||||||||||||||||||||||| ||| ||||| || |||| |||| Sbjct: 1047 gcagcgccatcacttatactagaagaattgccagccgttacagaacca 1000
>gb|AC155343.1| Brassica rapa subsp. pekinensis chromosome Cytogenetic chromosome 1 clone KBrH077A05, complete sequence Length = 113253 Score = 56.0 bits (28), Expect = 2e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 321 gtgaccaaaatgcgagcaccactgcacccaagtgggtgtcctaaagatacagctcctcca 380 ||||| |||||||||||||||||||| || ||||| ||||| || | ||||| |||||| Sbjct: 23105 gtgactaaaatgcgagcaccactgcatcccagtggatgtcccaatgcaacagcccctcca 23164 Query: 381 tgtacatt 388 ||| |||| Sbjct: 23165 tgtgcatt 23172
>gb|DQ347964.1| Picrorhiza kurrooa acetoacetyl-CoA thiolase mRNA, complete cds Length = 1515 Score = 52.0 bits (26), Expect = 0.003 Identities = 53/62 (85%) Strand = Plus / Minus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagtaccagcattttccttg 698 ||||| ||||||||||| ||||| ||||| ||||| ||||||| ||| || |||||||| Sbjct: 851 gcagcaccatcacttatgctagatgcattgccagctgtaacagaacccccagtttccttg 792 Query: 699 aa 700 || Sbjct: 791 aa 790
>dbj|AB023039.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MIF21 Length = 59372 Score = 52.0 bits (26), Expect = 0.003 Identities = 29/30 (96%) Strand = Plus / Plus Query: 404 aatcccgagaagcttttgatttgcaagtgc 433 ||||||||| |||||||||||||||||||| Sbjct: 44470 aatcccgagtagcttttgatttgcaagtgc 44499 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Plus Query: 339 ccactgcacccaagtgggtgtcctaaagatacagctcctccat 381 |||||||| || || ||||||||||| || ||||||||||||| Sbjct: 44303 ccactgcagcctagagggtgtcctaaggagacagctcctccat 44345 Score = 40.1 bits (20), Expect = 9.6 Identities = 29/32 (90%) Strand = Plus / Plus Query: 651 cttatactagaagcatttccagcagtaacagt 682 ||||| ||||| ||||||||||| |||||||| Sbjct: 45000 cttatgctagacgcatttccagctgtaacagt 45031
>ref|NM_183522.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1558 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 ||||| ||||||||||||||||||| ||| || ||||| |||| |||| Sbjct: 902 gcagcaccatcacttatactagaagaattgccggcagttacagaacca 855
>dbj|AK103194.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033121P11, full insert sequence Length = 1573 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 ||||| ||||||||||||||||||| ||| || ||||| |||| |||| Sbjct: 897 gcagcaccatcacttatactagaagaattgccggcagttacagaacca 850
>dbj|AK101017.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023149F12, full insert sequence Length = 1558 Score = 48.1 bits (24), Expect = 0.039 Identities = 42/48 (87%) Strand = Plus / Minus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagtacca 686 ||||| ||||||||||||||||||| ||| || ||||| |||| |||| Sbjct: 902 gcagcaccatcacttatactagaagaattgccggcagttacagaacca 855
>gb|AF374939.1| Prunus persica microsatellite BPPCT010 sequence Length = 730 Score = 46.1 bits (23), Expect = 0.16 Identities = 26/27 (96%) Strand = Plus / Plus Query: 659 agaagcatttccagcagtaacagtacc 685 ||||||||| ||||||||||||||||| Sbjct: 418 agaagcattcccagcagtaacagtacc 444
>dbj|D13470.1|YSACTPACTA Candida tropicalis CTPACTA gene for acetoacetyl-CoA thiolase A, complete cds Length = 1702 Score = 46.1 bits (23), Expect = 0.16 Identities = 38/43 (88%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagcaactccga 285 ||||| ||||| |||||||| || |||||||||||||| |||| Sbjct: 1437 gcagacgcaccaccaccgccattacagacaccagcaacaccga 1395
>gb|AC155314.2| Mus musculus BAC clone RP23-275G21 from chromosome 15, complete sequence Length = 205639 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 caccagaaaataaaagaacaat 45 |||||||||||||||||||||| Sbjct: 161185 caccagaaaataaaagaacaat 161164
>gb|AC127562.3| Mus musculus BAC clone RP24-279I22 from chromosome 15, complete sequence Length = 173351 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Minus Query: 24 caccagaaaataaaagaacaat 45 |||||||||||||||||||||| Sbjct: 22434 caccagaaaataaaagaacaat 22413
>gb|AC141108.3| Medicago truncatula clone mth2-22g6, complete sequence Length = 119745 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 419 ttgatttgcaagtgcaacagcc 440 |||||||||||||||||||||| Sbjct: 54124 ttgatttgcaagtgcaacagcc 54145
>dbj|AP004958.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT20B10, TM0135, complete sequence Length = 96988 Score = 44.1 bits (22), Expect = 0.62 Identities = 22/22 (100%) Strand = Plus / Plus Query: 29 gaaaataaaagaacaataacct 50 |||||||||||||||||||||| Sbjct: 5167 gaaaataaaagaacaataacct 5188
>gb|AC169705.1| Rhesus Macaque BAC CH250-174C17 (Children's Hospital Oakland Research Institute Rhesus macaque Adult Male BAC Library) complete sequence Length = 181644 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 413 aagcttttgatttgcaagtgc 433 ||||||||||||||||||||| Sbjct: 170248 aagcttttgatttgcaagtgc 170268
>gb|AE017341.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 1, complete sequence Length = 2300533 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 636 gctgcagcgccatcacttatactagaagcatttccagcagt 676 |||||||| ||||||| || | |||||||||||||||||| Sbjct: 1343706 gctgcagcaccatcacagatcccagaagcatttccagcagt 1343666
>ref|XM_716682.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_1704), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 aaatgcttcattaatttcataaaaatcaa 471 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_716561.1| Candida albicans SC5314 putative peroxisomal 3-ketoacyl-CoA thiolase (CaO19_9271), mRNA Length = 1233 Score = 42.1 bits (21), Expect = 2.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 443 aaatgcttcattaatttcataaaaatcaa 471 |||||||||||| |||||||||| ||||| Sbjct: 1017 aaatgcttcattgatttcataaatatcaa 989
>ref|XM_566797.1| Cryptococcus neoformans var. neoformans JEC21 acetyl-Coenzyme A acyltransferase 2 (CNA05060) partial mRNA Length = 1429 Score = 42.1 bits (21), Expect = 2.4 Identities = 36/41 (87%) Strand = Plus / Minus Query: 636 gctgcagcgccatcacttatactagaagcatttccagcagt 676 |||||||| ||||||| || | |||||||||||||||||| Sbjct: 937 gctgcagcaccatcacagatcccagaagcatttccagcagt 897
>ref|XM_724739.1| Plasmodium yoelii yoelii str. 17XNL acetyl-coa acetyltransferase (PY01991) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 ttcattaatttcataaaaatcaaca 473 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>ref|XM_736099.1| Plasmodium chabaudi chabaudi hypothetical protein (PC000254.00.0) partial mRNA Length = 267 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 ttcattaatttcataaaaatcaaca 473 |||||||||||||||| |||||||| Sbjct: 39 ttcattaatttcataataatcaaca 15
>ref|XM_674793.1| Plasmodium berghei strain ANKA acetyl-CoA acetyltransferase, (PB001025.03.0) partial mRNA Length = 1194 Score = 42.1 bits (21), Expect = 2.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 449 ttcattaatttcataaaaatcaaca 473 |||||||||||||||| |||||||| Sbjct: 966 ttcattaatttcataataatcaaca 942
>emb|CR388091.9| Zebrafish DNA sequence from clone CH211-114H16 in linkage group 15, complete sequence Length = 186423 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 30 aaaataaaagaacaataacct 50 ||||||||||||||||||||| Sbjct: 4513 aaaataaaagaacaataacct 4493
>emb|AL603724.3|RN141K6 Rattus norvegicus chromosome 20 clone PAC RPCI-31-484K6 strain Brown Norway (BN/ssNHsd), RT1n haplotype Length = 94535 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 gacacacaagcacctgaaact 166 ||||||||||||||||||||| Sbjct: 9519 gacacacaagcacctgaaact 9499
>emb|AL110796.1|CNS018TX Botrytis cinerea strain T4 cDNA library Length = 395 Score = 42.1 bits (21), Expect = 2.4 Identities = 45/53 (84%) Strand = Plus / Minus Query: 237 acaagtgcagatgcaccgccaccgccgttgcagacaccagcaactccgatctt 289 ||||| |||||||| || |||||||||||||| | ||| ||||| || ||||| Sbjct: 298 acaagagcagatgctccaccaccgccgttgcaaataccggcaacaccaatctt 246
>gb|AE016823.1| Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130, chromosome I, complete sequence Length = 4277185 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 387 tttatcttttctgaaggaatc 407 ||||||||||||||||||||| Sbjct: 789869 tttatcttttctgaaggaatc 789889
>emb|AJ430527.1|PWO430527 Passionfruit woodiness virus partial genomic RNA for polyprotein, genomic RNA Length = 1260 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 451 cattaatttcataaaaatcaa 471 ||||||||||||||||||||| Sbjct: 823 cattaatttcataaaaatcaa 803
>emb|AL928992.7| Mouse DNA sequence from clone RP23-208O9 on chromosome 2, complete sequence Length = 136064 Score = 42.1 bits (21), Expect = 2.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 600 agttcttgagccttctttcca 620 ||||||||||||||||||||| Sbjct: 74692 agttcttgagccttctttcca 74672
>gb|AC130671.7| Mus musculus chromosome 15, clone RP24-90K19, complete sequence Length = 205646 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acatggagacacacaagcac 158 |||||||||||||||||||| Sbjct: 45272 acatggagacacacaagcac 45253
>ref|XM_630905.1| Dictyostelium discoideum hypothetical protein (DDB0188659), partial mRNA Length = 1446 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 agctacaccagaaaataaaa 38 |||||||||||||||||||| Sbjct: 114 agctacaccagaaaataaaa 133
>gb|AC107868.9| Mus musculus chromosome 17, clone RP23-405A17, complete sequence Length = 193624 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 452 attaatttcataaaaatcaa 471 |||||||||||||||||||| Sbjct: 151141 attaatttcataaaaatcaa 151160
>ref|XM_454425.1| Kluyveromyces lactis NRRL Y-1140, KLLA0E10505g predicted mRNA Length = 4701 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 383 tacatttatcttttctgaag 402 |||||||||||||||||||| Sbjct: 3630 tacatttatcttttctgaag 3611
>gb|AC113038.14| Mus musculus chromosome 17, clone RP23-228K17, complete sequence Length = 226769 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 452 attaatttcataaaaatcaa 471 |||||||||||||||||||| Sbjct: 137590 attaatttcataaaaatcaa 137571
>gb|AY458634.2| Uncultured bacterium 314 clone EBAC750-09G06 genomic sequence Length = 48824 Score = 40.1 bits (20), Expect = 9.6 Identities = 38/44 (86%) Strand = Plus / Plus Query: 639 gcagcgccatcacttatactagaagcatttccagcagtaacagt 682 ||||| |||||| | |||| |||||||||||| ||||| ||||| Sbjct: 24630 gcagcaccatcattaataccagaagcatttcctgcagttacagt 24673
>gb|AC135253.2| Homo sapiens 3 BAC RP11-324L7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 154492 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 28 agaaaataaaagaacaataa 47 |||||||||||||||||||| Sbjct: 143461 agaaaataaaagaacaataa 143442
>gb|BC054299.1| Xenopus laevis acetyl-Coenzyme A acyltransferase 1, mRNA (cDNA clone MGC:64556 IMAGE:6879896), complete cds Length = 1718 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 444 aatgcttcattaatttcata 463 |||||||||||||||||||| Sbjct: 1050 aatgcttcattaatttcata 1031
>gb|AC107232.4| Mus musculus chromosome 15, clone RP23-144B2, complete sequence Length = 204292 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 139 acatggagacacacaagcac 158 |||||||||||||||||||| Sbjct: 15019 acatggagacacacaagcac 15038
>emb|AL031779.5|HS445N2 Human DNA sequence from clone RP3-445N2 on chromosome 6p12.1-21.1 Contains the 5' end of the COL21A1 gene for collagen, type XXI, alpha 1 (collagen XXI, collagen, type XX, alpha 1, COLA1L, COL20A1, DKFZp564B052) and part of a novel gene, complete sequence Length = 101010 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 ccttctttccactcaccaat 629 |||||||||||||||||||| Sbjct: 31927 ccttctttccactcaccaat 31908
>emb|AL590233.23| Human DNA sequence from clone RP13-93L13 on chromosome 9 Contains a ubiquitin-conjugating enzyme E2 pseudogene, a proliferation-associated 2G4, 38kDa (PA2G4) pseuodgene, the 5' end of the SEMA4D gene for sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D and a CpG island, complete sequence Length = 109008 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tttccaaaacagctacacca 28 |||||||||||||||||||| Sbjct: 12469 tttccaaaacagctacacca 12450
>emb|AL355173.25| Human DNA sequence from clone RP11-335P18 on chromosome 13 Contains the 3' end of the PCDH9 gene for protocadherin 9 and a novel gene, complete sequence Length = 165699 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acatggagacacacaagcac 158 |||||||||||||||||||| Sbjct: 55716 acatggagacacacaagcac 55697
>gb|AE017157.1| Chlamydophila pneumoniae TW-183, section 1 of 4 of the complete genome Length = 300923 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gagaagcttttgatttgcaa 429 |||||||||||||||||||| Sbjct: 60688 gagaagcttttgatttgcaa 60707
>emb|AL138816.12| Human DNA sequence from clone RP11-235O20 on chromosome 13 Contains the 3' end of the gene for a novel protein similar to heparan sulfate 6-sulfotransferase, complete sequence Length = 142420 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 139 acatggagacacacaagcac 158 |||||||||||||||||||| Sbjct: 105339 acatggagacacacaagcac 105320
>emb|AL049588.11|HSJ169P22 Human DNA sequence from clone RP1-169P22 on chromosome Xq27.1-28 Contains two pseudogenes similar to part of ribonucleotide reductase M2 polypeptide (RRM2), complete sequence Length = 150579 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 28 agaaaataaaagaacaataa 47 |||||||||||||||||||| Sbjct: 107603 agaaaataaaagaacaataa 107622
>emb|CR382125.1| Kluyveromyces lactis strain NRRL Y-1140 chromosome E of strain NRRL Y-1140 of Kluyveromyces lactis Length = 2234072 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 383 tacatttatcttttctgaag 402 |||||||||||||||||||| Sbjct: 925772 tacatttatcttttctgaag 925791
>dbj|BA000032.2| Vibrio parahaemolyticus RIMD 2210633 DNA, chromosome 2, complete sequence Length = 1877212 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 321 gtgaccaaaatgcgagcaccactg 344 ||||||||||||||||| |||||| Sbjct: 625719 gtgaccaaaatgcgagccccactg 625696
>gb|AF438327.1| Homo sapiens alpha 1 type XXI collagen precursor (COL21A1) gene, complete cds, alternatively spliced Length = 381696 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 610 ccttctttccactcaccaat 629 |||||||||||||||||||| Sbjct: 8179 ccttctttccactcaccaat 8160
>gb|AC087463.5| Homo sapiens chromosome 15, clone RP11-682C24, complete sequence Length = 196918 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 accagaaaataaaagaacaataac 48 |||||||||||||| ||||||||| Sbjct: 104082 accagaaaataaaacaacaataac 104059
>gb|AC087474.9| Homo sapiens chromosome 15, clone RP11-350A1, complete sequence Length = 185221 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 accagaaaataaaagaacaataac 48 |||||||||||||| ||||||||| Sbjct: 79153 accagaaaataaaacaacaataac 79130
>gb|AE002161.1| Chlamydophila pneumoniae AR39, complete genome Length = 1229853 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 410 gagaagcttttgatttgcaa 429 |||||||||||||||||||| Sbjct: 777999 gagaagcttttgatttgcaa 777980
>emb|BX470260.10| Zebrafish DNA sequence from clone CH211-125C23 in linkage group 14, complete sequence Length = 66554 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 149 acacaagcacctgaaactgc 168 |||||||||||||||||||| Sbjct: 34117 acacaagcacctgaaactgc 34098
>gb|AC155934.2| Mus musculus BAC clone RP23-58N8 from chromosome 9, complete sequence Length = 198059 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cagaggcaggctccatcttt 194 |||||||||||||||||||| Sbjct: 26453 cagaggcaggctccatcttt 26472
>gb|AC158516.2| Mus musculus BAC clone RP24-511A23 from chromosome 9, complete sequence Length = 167046 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 175 cagaggcaggctccatcttt 194 |||||||||||||||||||| Sbjct: 163143 cagaggcaggctccatcttt 163162
>gb|AC022001.5| Homo sapiens chromosome 3 clone RP11-169K17 map 3p, complete sequence Length = 164607 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tttccaaaacagctacacca 28 |||||||||||||||||||| Sbjct: 50532 tttccaaaacagctacacca 50513
>emb|BX005328.9| Zebrafish DNA sequence from clone DKEY-63D15 in linkage group 8, complete sequence Length = 272840 Score = 40.1 bits (20), Expect = 9.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 23 acaccagaaaataaaagaacaataacct 50 |||||| ||||||||| ||||||||||| Sbjct: 12775 acaccaaaaaataaaaaaacaataacct 12802
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acaccagaaaataaaagaac 42 |||||||||||||||||||| Sbjct: 6950852 acaccagaaaataaaagaac 6950871
>gb|AC018811.4|AC018811 Homo sapiens chromosome 3 clone RP11-13B4 map 3p, complete sequence Length = 177834 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 tttccaaaacagctacacca 28 |||||||||||||||||||| Sbjct: 32169 tttccaaaacagctacacca 32150
>gb|AC108483.3| Homo sapiens chromosome 16 clone RP11-170P24, complete sequence Length = 163976 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 598 caagttcttgagccttcttt 617 |||||||||||||||||||| Sbjct: 71180 caagttcttgagccttcttt 71199
>gb|AC139362.2| Homo sapiens chromosome 15, clone RP11-580I1, complete sequence Length = 195033 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 accagaaaataaaagaacaataac 48 |||||||||||||| ||||||||| Sbjct: 107726 accagaaaataaaacaacaataac 107703
>gb|AC108171.3| Homo sapiens chromosome X clone RP11-468J11, RP11-473F11, CTC-775O14 map q28, complete sequence Length = 185708 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aagttaaccaattacttaatctgg 106 |||||||||||||| ||||||||| Sbjct: 40428 aagttaaccaattaattaatctgg 40405
>gb|AF274857.3| Homo sapiens chromosome X clone CTD-2011N23 map q28, complete sequence Length = 148527 Score = 40.1 bits (20), Expect = 9.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 83 aagttaaccaattacttaatctgg 106 |||||||||||||| ||||||||| Sbjct: 55049 aagttaaccaattaattaatctgg 55026
>gb|AE001363.1| Chlamydophila pneumoniae CWL029, complete genome Length = 1230230 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gagaagcttttgatttgcaa 429 |||||||||||||||||||| Sbjct: 63192 gagaagcttttgatttgcaa 63211
>gb|AC134903.4| Mus musculus BAC clone RP23-329A21 from chromosome 5, complete sequence Length = 198368 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aggagttctaagttaaccaa 93 |||||||||||||||||||| Sbjct: 6872 aggagttctaagttaaccaa 6853
>dbj|BA000008.3| Chlamydophila pneumoniae J138 genomic DNA, complete sequence Length = 1226565 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 410 gagaagcttttgatttgcaa 429 |||||||||||||||||||| Sbjct: 62873 gagaagcttttgatttgcaa 62892
>emb|AL773518.3| Mouse DNA sequence from clone RP24-231F12 on chromosome 4, complete sequence Length = 205765 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 516 gcaagtgctggggtagtggt 535 |||||||||||||||||||| Sbjct: 87134 gcaagtgctggggtagtggt 87115
>dbj|AP004572.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0668C05 Length = 142081 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acaccagaaaataaaagaac 42 |||||||||||||||||||| Sbjct: 74667 acaccagaaaataaaagaac 74686
>gb|AC115853.8| Mus musculus chromosome 5, clone RP24-273B9, complete sequence Length = 188562 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 aggagttctaagttaaccaa 93 |||||||||||||||||||| Sbjct: 158456 aggagttctaagttaaccaa 158437
>emb|BX004850.11| Zebrafish DNA sequence from clone CH211-51M24 in linkage group 19, complete sequence Length = 121375 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 cagaaaataaaagaacaata 46 |||||||||||||||||||| Sbjct: 90260 cagaaaataaaagaacaata 90279
>dbj|AP003740.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1118_B03 Length = 108992 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 acaccagaaaataaaagaac 42 |||||||||||||||||||| Sbjct: 107107 acaccagaaaataaaagaac 107126
>gb|AC174384.2| Gallus gallus BAC clone CH261-128H23 from chromosome ul, complete sequence Length = 206900 Score = 40.1 bits (20), Expect = 9.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 ggtgtttgttacaaggtcag 214 |||||||||||||||||||| Sbjct: 99127 ggtgtttgttacaaggtcag 99146
>dbj|D13471.1|YSACTPACTB Candida tropicalis CTPACTB gene for acetoacetyl-CoA thiolase A, complete cds Length = 1707 Score = 40.1 bits (20), Expect = 9.6 Identities = 32/36 (88%) Strand = Plus / Minus Query: 243 gcagatgcaccgccaccgccgttgcagacaccagca 278 ||||| ||||| ||||| ||||| |||||||||||| Sbjct: 1443 gcagaggcaccaccaccaccgttacagacaccagca 1408 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 7,993,614 Number of Sequences: 3902068 Number of extensions: 7993614 Number of successful extensions: 155196 Number of sequences better than 10.0: 100 Number of HSP's better than 10.0 without gapping: 100 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 154769 Number of HSP's gapped (non-prelim): 423 length of query: 703 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 680 effective length of database: 17,143,297,704 effective search space: 11657442438720 effective search space used: 11657442438720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
