ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11o05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL359752.11| Human DNA sequence from clone RP5-1042I8 on chr... 46 0.16
2emb|CR648748.2|CNS0EZJM Tetraodon nigroviridis full-length cDNA 44 0.64
3gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Canc... 44 0.64
4gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, comple... 44 0.64
5gb|AC012560.5| Homo sapiens chromosome 10 clone RP11-397I15, com... 42 2.5
6ref|NM_165878.1| Drosophila melanogaster CG30046-RB (CG30046), mRNA 42 2.5
7gb|AC010163.8| Homo sapiens chromosome 10 clone RP11-90J7, compl... 42 2.5
8gb|AY070714.1| Drosophila melanogaster SD07907 full length cDNA 42 2.5
9gb|AC021233.9| Homo sapiens chromosome 11, clone RP11-215H22, co... 42 2.5
10gb|AC007476.5|AC007476 Drosophila melanogaster, chromosome 2R, r... 42 2.5
11gb|AC007440.6|AC007440 Drosophila melanogaster, chromosome 2R, r... 42 2.5
12emb|BX822540.1|CNS0A70Q Arabidopsis thaliana Full-length cDNA Co... 42 2.5
13gb|AE003822.3| Drosophila melanogaster chromosome 2R, section 28... 42 2.5
14ref|XM_476285.1| Oryza sativa (japonica cultivar-group), predic... 40 10.0
15gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5... 40 10.0
16gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, com... 40 10.0
17gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 10.0
18gb|AY647955.1| Arabidopsis lyrata subsp. petraea AT4G28750 gene,... 40 10.0
19gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, com... 40 10.0
20gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 40 10.0
21gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, com... 40 10.0
22gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, com... 40 10.0
23gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete seq... 40 10.0
24emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chro... 40 10.0
25emb|AL162408.8| Human DNA sequence from clone RP11-397O4 on chro... 40 10.0
26emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chr... 40 10.0
27emb|AL136369.7| Human DNA sequence from clone RP1-251M9 on chrom... 40 10.0
28emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11... 40 10.0
29emb|AL034491.1|SPCC1620 S.pombe chromosome III cosmid c1620 40 10.0
30emb|AL928592.13| Mouse DNA sequence from clone RP24-168J7 on chr... 40 10.0
31gb|AC116316.4| Homo sapiens BAC clone RP11-1258N14 from 4, compl... 40 10.0
32gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, c... 40 10.0
33gb|AC006061.1| Homo sapiens X BAC GSHB-19O24 (Genome Systems Hum... 40 10.0
34gb|AC079310.20| Homo sapiens 12 BAC RP11-850F7 (Roswell Park Can... 40 10.0
35gb|AF418981.1|AF418981 Homo sapiens preproteolysin (DSEP) gene, ... 40 10.0
36gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complet... 40 10.0
37gb|AF314199.1|AF314199S1 Homo sapiens neuroplastoma apoptosis-re... 40 10.0
38ref|NM_001023456.1| Schizosaccharomyces pombe 972h- hypothetical... 40 10.0
39gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell ... 40 10.0
40gb|AC139887.3| Homo sapiens BAC clone RP11-440L14 from 4, comple... 40 10.0
41dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
42gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8,... 40 10.0
43gb|U79302.1|HSU79302 Human clone 23855 mRNA, partial cds 40 10.0
44dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 10.0
45dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome 40 10.0
46dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic D... 40 10.0
47dbj|AK067892.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 10.0
48gb|AC154230.2| Mus musculus BAC clone RP24-156E24 from 16, compl... 40 10.0
49gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CI... 40 10.0
50dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 10.0
51gb|AC131775.4| Mus musculus BAC clone RP24-313O6 from 6, complet... 40 10.0
52gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complet... 40 10.0
53gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosom... 40 10.0
54dbj|AP005204.2| Homo sapiens genomic DNA, chromosome 18 clone:RP... 40 10.0 
>emb|AL359752.11| Human DNA sequence from clone RP5-1042I8 on chromosome 1p11-13.2 Contains
              the REG4 gene for regenerating islet-derived family member
              4, a novel pseudogene, a profilin 1 (PFN1) pseudogene, the
              ADAM30 gene for a disintegrin and metalloproteinase domain
              30 and the 3' end of the NOTCH2 gene for Notch homolog 2
              (Drosophila), complete sequence
          Length = 137955

 Score = 46.1 bits (23), Expect = 0.16
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 593    tgctgaaggggaggaagggaggc 615
              |||||||||||||||||||||||
Sbjct: 132423 tgctgaaggggaggaagggaggc 132401
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>emb|CR648748.2|CNS0EZJM Tetraodon nigroviridis full-length cDNA
          Length = 1350

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 585 gtgtgagctgctgaaggggagg 606
           ||||||||||||||||||||||
Sbjct: 832 gtgtgagctgctgaaggggagg 811
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>gb|AC153626.5| Mus musculus 6 BAC RP23-245J24 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 190365

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 66    acatcaacttccagatgaacaaaatg 91
             |||||||||||||||||||| |||||
Sbjct: 93861 acatcaacttccagatgaactaaatg 93836
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>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence
          Length = 215582

 Score = 44.1 bits (22), Expect = 0.64
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 585    gtgtgagctgctgaaggggagg 606
              ||||||||||||||||||||||
Sbjct: 165393 gtgtgagctgctgaaggggagg 165414
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>gb|AC012560.5| Homo sapiens chromosome 10 clone RP11-397I15, complete sequence
          Length = 170917

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 64     taacatcaacttccagatgaa 84
              |||||||||||||||||||||
Sbjct: 169390 taacatcaacttccagatgaa 169370
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>ref|NM_165878.1| Drosophila melanogaster CG30046-RB (CG30046), mRNA
          Length = 2642

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 416  ctcccatgaaacccatggcca 436
            |||||||||||||||||||||
Sbjct: 1226 ctcccatgaaacccatggcca 1246
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>gb|AC010163.8| Homo sapiens chromosome 10 clone RP11-90J7, complete sequence
          Length = 157069

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 64     taacatcaacttccagatgaa 84
              |||||||||||||||||||||
Sbjct: 106123 taacatcaacttccagatgaa 106143
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>gb|AY070714.1| Drosophila melanogaster SD07907 full length cDNA
          Length = 2861

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 416  ctcccatgaaacccatggcca 436
            |||||||||||||||||||||
Sbjct: 1249 ctcccatgaaacccatggcca 1269
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>gb|AC021233.9| Homo sapiens chromosome 11, clone RP11-215H22, complete sequence
          Length = 159641

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 26    aaatattatgaaaaagcccaa 46
             |||||||||||||||||||||
Sbjct: 65741 aaatattatgaaaaagcccaa 65721
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>gb|AC007476.5|AC007476 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
            BACR37P06, complete sequence
          Length = 171705

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 416  ctcccatgaaacccatggcca 436
            |||||||||||||||||||||
Sbjct: 4067 ctcccatgaaacccatggcca 4087
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>gb|AC007440.6|AC007440 Drosophila melanogaster, chromosome 2R, region 49A-49B, BAC clone
              BACR37I09, complete sequence
          Length = 184621

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 416    ctcccatgaaacccatggcca 436
              |||||||||||||||||||||
Sbjct: 158702 ctcccatgaaacccatggcca 158722
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>emb|BX822540.1|CNS0A70Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB47ZE02 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1797

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 174 atcgggagaagaagaagaggt 194
           |||||||||||||||||||||
Sbjct: 113 atcgggagaagaagaagaggt 93
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>gb|AE003822.3| Drosophila melanogaster chromosome 2R, section 28 of 73 of the complete
             sequence
          Length = 233148

 Score = 42.1 bits (21), Expect = 2.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 416   ctcccatgaaacccatggcca 436
             |||||||||||||||||||||
Sbjct: 27193 ctcccatgaaacccatggcca 27213
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>ref|XM_476285.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 2406

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 agaagaagaagaggttgttg 199
           ||||||||||||||||||||
Sbjct: 159 agaagaagaagaggttgttg 178
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>gb|AE014840.1| Plasmodium falciparum 3D7 chromosome 11 section 5 of 8 of the complete
              sequence
          Length = 249995

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 21     gtacaaaatattatgaaaaa 40
              ||||||||||||||||||||
Sbjct: 215356 gtacaaaatattatgaaaaa 215375
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>gb|AC113271.10| Mus musculus chromosome 5, clone RP23-376H8, complete sequence
          Length = 185353

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 584   cgtgtgagctgctgaaggggagga 607
             ||||||||||||||||| ||||||
Sbjct: 34565 cgtgtgagctgctgaagaggagga 34542
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 71      aacttccagatgaacaaaat 90
               ||||||||||||||||||||
Sbjct: 3319217 aacttccagatgaacaaaat 3319236
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>gb|AY647955.1| Arabidopsis lyrata subsp. petraea AT4G28750 gene, partial cds
          Length = 756

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 96  aaccatgttatgaacaaaag 115
           ||||||||||||||||||||
Sbjct: 390 aaccatgttatgaacaaaag 371
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>gb|AC116412.19| Mus musculus chromosome 5, clone RP24-82A20, complete sequence
          Length = 191823

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 508   ggagaggaaccagtgggttt 527
             ||||||||||||||||||||
Sbjct: 25286 ggagaggaaccagtgggttt 25305
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 407    gccaaacacctcccatgaaaccca 430
              |||||||||||||||| |||||||
Sbjct: 311840 gccaaacacctcccatcaaaccca 311863
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>gb|AC137749.11| Mus musculus chromosome 6, clone RP23-69C16, complete sequence
          Length = 293695

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 177   gggagaagaagaagaggttg 196
             ||||||||||||||||||||
Sbjct: 77043 gggagaagaagaagaggttg 77062
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>gb|AC110234.11| Mus musculus chromosome 5, clone RP23-76J15, complete sequence
          Length = 235276

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 584    cgtgtgagctgctgaaggggagga 607
              ||||||||||||||||| ||||||
Sbjct: 220819 cgtgtgagctgctgaagaggagga 220796
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>gb|AC122723.6| Medicago truncatula clone mth2-5i15, complete sequence
          Length = 105353

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 237   gtcgatgatggtggtggcga 256
             ||||||||||||||||||||
Sbjct: 35755 gtcgatgatggtggtggcga 35736
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>emb|AL133330.14| Human DNA sequence from clone RP1-68D18 on chromosome 11p12-13 Contains
             part of the SLC1A2 gene for three variants of solute
             carrier family 1 (glial high affinity glutamate
             transporter) member 2 and part of the CD44 gene for CD44
             antigen (homing function and Indian blood group system)
             with five variants, complete sequence
          Length = 183682

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 97    accatgttatgaacaaaagc 116
             ||||||||||||||||||||
Sbjct: 82387 accatgttatgaacaaaagc 82368
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>emb|AL162408.8| Human DNA sequence from clone RP11-397O4 on chromosome 10 Contains
           a novel gene, the 5' end of a novel gene and a CpG
           island, complete sequence
          Length = 28205

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 405 cagccaaacacctcccatga 424
           ||||||||||||||||||||
Sbjct: 202 cagccaaacacctcccatga 221
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>emb|AL139243.11| Human DNA sequence from clone RP11-439D8 on chromosome 10 Contains a
             novel gene, the HPS1 gene for Hermansky-Pudlak syndrome 1,
             the 3' end of the HPSE2 gene for heparanase 2 and a CpG
             island, complete sequence
          Length = 143463

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 70    caacttccagatgaacaaaa 89
             ||||||||||||||||||||
Sbjct: 98982 caacttccagatgaacaaaa 99001
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>emb|AL136369.7| Human DNA sequence from clone RP1-251M9 on chromosome 10 Contains three
              novel genes, complete sequence
          Length = 110952

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 405    cagccaaacacctcccatga 424
              ||||||||||||||||||||
Sbjct: 109125 cagccaaacacctcccatga 109144
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>emb|AL031965.8|HS355N11 Human DNA sequence from clone RP3-355N11 on chromosome 1q24.1-24.3
             Contains the 5' end of a novel gene (FLJ23550), complete
             sequence
          Length = 78336

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 465   aaatatgctccatgaacaaa 484
             ||||||||||||||||||||
Sbjct: 21591 aaatatgctccatgaacaaa 21572
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>emb|AL034491.1|SPCC1620 S.pombe chromosome III cosmid c1620
          Length = 30198

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 173   catcgggagaagaagaagag 192
             ||||||||||||||||||||
Sbjct: 12664 catcgggagaagaagaagag 12683
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>emb|AL928592.13| Mouse DNA sequence from clone RP24-168J7 on chromosome 4 Contains a
             novel pseudogene and a novel gene, complete sequence
          Length = 126611

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 507   gggagaggaaccagtgggtt 526
             ||||||||||||||||||||
Sbjct: 54889 gggagaggaaccagtgggtt 54870
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>gb|AC116316.4| Homo sapiens BAC clone RP11-1258N14 from 4, complete sequence
          Length = 130364

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 234   gatgtcgatgatggtggtgg 253
             ||||||||||||||||||||
Sbjct: 14332 gatgtcgatgatggtggtgg 14351
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>gb|AC092733.18| Homo sapiens chromosome 11, clone RP11-193F22, complete sequence
          Length = 195538

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 596    tgaaggggaggaagggaggccagt 619
              ||||||||||| ||||||||||||
Sbjct: 150811 tgaaggggaggtagggaggccagt 150834
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>gb|AC006061.1| Homo sapiens X BAC GSHB-19O24 (Genome Systems Human BAC Library)
            complete sequence
          Length = 98056

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 595  ctgaaggggaggaagggagg 614
            ||||||||||||||||||||
Sbjct: 2385 ctgaaggggaggaagggagg 2404
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>gb|AC079310.20| Homo sapiens 12 BAC RP11-850F7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 180971

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 608   agggaggccagtggtgtgga 627
             ||||||||||||||||||||
Sbjct: 87024 agggaggccagtggtgtgga 87043
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>gb|AF418981.1|AF418981 Homo sapiens preproteolysin (DSEP) gene, promoter region and complete
            cds
          Length = 8182

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 608  agggaggccagtggtgtgga 627
            ||||||||||||||||||||
Sbjct: 3747 agggaggccagtggtgtgga 3728
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>gb|AC008641.7| Homo sapiens chromosome 5 clone CTB-17P3, complete sequence
          Length = 176629

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 599   aggggaggaagggaggccag 618
             ||||||||||||||||||||
Sbjct: 74826 aggggaggaagggaggccag 74807
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>gb|AF314199.1|AF314199S1 Homo sapiens neuroplastoma apoptosis-related RNA-binding protein
             (CUGBP2) gene, exons 1a and 1b
          Length = 59000

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 405   cagccaaacacctcccatga 424
             ||||||||||||||||||||
Sbjct: 20977 cagccaaacacctcccatga 20996
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>ref|NM_001023456.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPCC1620.07c), partial mRNA
          Length = 1005

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 173 catcgggagaagaagaagag 192
           ||||||||||||||||||||
Sbjct: 928 catcgggagaagaagaagag 909
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>gb|AC025262.27|AC025262 Homo sapiens 12 BAC RP11-629N8 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 167276

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    tacaaaatattatgaaaaag 41
             ||||||||||||||||||||
Sbjct: 11478 tacaaaatattatgaaaaag 11459
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>gb|AC139887.3| Homo sapiens BAC clone RP11-440L14 from 4, complete sequence
          Length = 186774

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 601    gggaggaagggaggccagtg 620
              ||||||||||||||||||||
Sbjct: 168640 gggaggaagggaggccagtg 168621
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              complete sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    agaagaagaagaggttgttg 199
              ||||||||||||||||||||
Sbjct: 265913 agaagaagaagaggttgttg 265932
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>gb|AC008666.5|AC008666 Homo sapiens chromosome 5 clone CTB-35A8, complete sequence
          Length = 99108

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 599   aggggaggaagggaggccag 618
             ||||||||||||||||||||
Sbjct: 24077 aggggaggaagggaggccag 24096
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>gb|U79302.1|HSU79302 Human clone 23855 mRNA, partial cds
          Length = 1976

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 596 tgaaggggaggaagggaggccagt 619
           ||||||||||| ||||||||||||
Sbjct: 995 tgaaggggaggtagggaggccagt 972
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>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 232    gcgatgtcgatgatggtggt 251
              ||||||||||||||||||||
Sbjct: 350218 gcgatgtcgatgatggtggt 350199
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>dbj|BA000019.2| Nostoc sp. PCC 7120 DNA, complete genome
          Length = 6413771

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 407     gccaaacacctcccatgaaaccca 430
               |||||||||||||||| |||||||
Sbjct: 2923412 gccaaacacctcccatcaaaccca 2923435
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>dbj|AP002842.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
              clone:OSJNBa0075G19
          Length = 163558

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    agaagaagaagaggttgttg 199
              ||||||||||||||||||||
Sbjct: 130809 agaagaagaagaggttgttg 130828
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>dbj|AK067892.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123L02, full
           insert sequence
          Length = 2506

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 180 agaagaagaagaggttgttg 199
           ||||||||||||||||||||
Sbjct: 233 agaagaagaagaggttgttg 252
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>gb|AC154230.2| Mus musculus BAC clone RP24-156E24 from 16, complete sequence
          Length = 136341

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 503   atcagggagaggaaccagtg 522
             ||||||||||||||||||||
Sbjct: 83998 atcagggagaggaaccagtg 84017
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>gb|AC007786.1|AC007786 Homo sapiens chromosome 19, BAC 41855 (CIT-B-32o4), complete sequence
          Length = 229061

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 25    aaaatattatgaaaaagccc 44
             ||||||||||||||||||||
Sbjct: 46489 aaaatattatgaaaaagccc 46470
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>dbj|AP002478.3| Homo sapiens genomic DNA, chromosome 18 clone:RP11-874J12, complete
              sequence
          Length = 226147

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 640    gggaggccgatgaagggaga 659
              ||||||||||||||||||||
Sbjct: 197325 gggaggccgatgaagggaga 197344
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>gb|AC131775.4| Mus musculus BAC clone RP24-313O6 from 6, complete sequence
          Length = 171720

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 696    aatctagagcagggcagata 715
              ||||||||||||||||||||
Sbjct: 160816 aatctagagcagggcagata 160797
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>gb|AC127328.6| Mus musculus BAC clone RP23-259B8 from 6, complete sequence
          Length = 186950

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 177    gggagaagaagaagaggttg 196
              ||||||||||||||||||||
Sbjct: 133347 gggagaagaagaagaggttg 133366
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>gb|AC171205.1| Mus musculus BAC clone RP23-441H20 from chromosome 16, complete sequence
          Length = 212822

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 503    atcagggagaggaaccagtg 522
              ||||||||||||||||||||
Sbjct: 211696 atcagggagaggaaccagtg 211677
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>dbj|AP005204.2| Homo sapiens genomic DNA, chromosome 18 clone:RP11-340P19, complete
             sequence
          Length = 157244

 Score = 40.1 bits (20), Expect = 10.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 640   gggaggccgatgaagggaga 659
             ||||||||||||||||||||
Sbjct: 40927 gggaggccgatgaagggaga 40946


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,281,196
Number of Sequences: 3902068
Number of extensions: 7281196
Number of successful extensions: 184329
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 184008
Number of HSP's gapped (non-prelim): 321
length of query: 729
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 706
effective length of database: 17,143,297,704
effective search space: 12103168179024
effective search space used: 12103168179024
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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