Clone Name | rbasd11o04 |
---|---|
Clone Library Name | barley_pub |
>YD72_SCHPO (Q10327) Hypothetical protein C32A11.02c in chromosome I| Length = 851 Score = 33.9 bits (76), Expect = 0.45 Identities = 12/47 (25%), Positives = 27/47 (57%) Frame = -1 Query: 575 EHPVDEAINRAESLLEKLKSFAGEMKVRSSHALERVMQYVRSLISSL 435 +HPV +N + ++KL +G + ++ +R MQY++ L+ ++ Sbjct: 247 QHPVRSLLNLIDKFIDKLSEQSGNVTADTNEHYDRAMQYLKQLVENI 293
>YCFI_YEAST (P39109) Metal resistance protein YCF1 (Yeast cadmium factor 1)| Length = 1515 Score = 31.2 bits (69), Expect = 2.9 Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%) Frame = +3 Query: 54 YVASSLL-LHYIHSFIYNNTQNVMYSTTSHDAKCSTSCHKIYSSVSCLFGWL*IVWSQIH 230 Y+ S+L L Y S + +N + + ST S K+ L WL ++WS Sbjct: 376 YIKSALTALIYQKSLVLSNEASGLSSTGDIVNLMSVDVQKLQD----LTQWLNLIWS--- 428 Query: 231 KA*KAPYQQLVCLESVHKLL 290 P+Q ++CL S++KLL Sbjct: 429 ----GPFQIIICLYSLYKLL 444
>EZRA_STAES (Q8CNW5) Septation ring formation regulator ezrA| Length = 564 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 569 PVDEAINRAESLLEKLKSFAGEMKVRSSHAL 477 PV+E I AE LLEK K A + ++ +H L Sbjct: 83 PVEEKIQNAEELLEKFKFTAAQTEIDDAHEL 113
>EZRA_STAEQ (Q5HNI8) Septation ring formation regulator ezrA| Length = 564 Score = 30.8 bits (68), Expect = 3.8 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 569 PVDEAINRAESLLEKLKSFAGEMKVRSSHAL 477 PV+E I AE LLEK K A + ++ +H L Sbjct: 83 PVEEKIQNAEELLEKFKFTAAQTEIDDAHEL 113
>Y4628_STRCO (Q04296) Putative HTH-type transcriptional regulator SCO4628| Length = 269 Score = 30.4 bits (67), Expect = 5.0 Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 5/83 (6%) Frame = -3 Query: 480 PGESNAVCEVLDLKPEG-GSGARVRRSWGCCSLKGKEAVIRSEGVGFKRRGQVEE-GSGG 307 PGE + ++ DL G GS V R++ +G A+ R G +R+ ++ G G Sbjct: 26 PGEQ--LPQIRDLVEAGEGSKETVHRAYKALETEGLVAMSRGHGTVVRRKAPLKRLGIGR 83 Query: 306 LQR---RPGEVCAQIQDRLAAGR 247 + R G+ A I DR+A+GR Sbjct: 84 YDKAKWRDGDEVAFIADRVASGR 106
>ALBG2_BACSU (Q8RKH1) Antilisterial bacteriocin subtilosin biosynthesis protein| albG Length = 233 Score = 30.0 bits (66), Expect = 6.6 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 5/54 (9%) Frame = +3 Query: 33 KIGLICCYVASSLL-----LHYIHSFIYNNTQNVMYSTTSHDAKCSTSCHKIYS 179 ++GL+ C A +L LHY+ + N T T SH + C H++ S Sbjct: 44 RLGLLACIAAVLMLPAFLYLHYVTQSVKNMTAAFQKLTQSHQSCCDFQHHRLCS 97 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 90,790,598 Number of Sequences: 219361 Number of extensions: 1893585 Number of successful extensions: 4897 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 4747 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4894 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6484657212 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)