Clone Information

BLAST Search Result

Clone Name	rbasd11o02
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamm...	85	5e-17
2	SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)	35	0.035
3	SNF4_KLULA (Q9P869) Nuclear protein SNF4	34	0.078
4	YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I	34	0.10
5	YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS	33	0.17
6	YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP	32	0.51
7	YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT	31	0.66
8	Y1842_MYCTU (Q50592) Hypothetical UPF0053 protein Rv1842c/MT1890	31	0.86
9	IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1...	31	0.86
10	Y107_HAEIN (Q57017) Hypothetical UPF0053 protein HI0107	31	0.86
11	YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA	30	1.1
12	Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740	30	1.1
13	CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC	30	1.5
14	CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC	30	1.9
15	CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC	30	1.9
16	AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 su...	30	1.9
17	AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 su...	29	2.5
18	YC19_KLEPN (Q48445) Hypothetical UPF0053 protein in cps region (...	29	2.5
19	AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 su...	29	3.3
20	AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 su...	29	3.3
21	YEGH_SHIFL (Q83KI8) Hypothetical UPF0053 protein yegH	29	3.3
22	YEGH_ECOLI (P76389) Hypothetical UPF0053 protein yegH	29	3.3
23	IMDH_CHLVI (O50316) Inosine-5'-monophosphate dehydrogenase (EC 1...	29	3.3
24	CORC_SHIFL (P0AE81) Magnesium and cobalt efflux protein corC	29	3.3
25	CORC_SALTY (P0A2L3) Magnesium and cobalt efflux protein corC	29	3.3
26	CORC_SALTI (P0A2L4) Magnesium and cobalt efflux protein corC	29	3.3
27	CORC_ECOLI (P0AE78) Magnesium and cobalt efflux protein corC	29	3.3
28	CORC_ECOL6 (P0AE79) Magnesium and cobalt efflux protein corC	29	3.3
29	CORC_ECO57 (P0AE80) Magnesium and cobalt efflux protein corC	29	3.3
30	AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subu...	29	3.3
31	AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 su...	29	3.3
32	AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 su...	29	3.3
33	AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subu...	28	4.3
34	AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subu...	28	4.3
35	AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 su...	28	4.3
36	IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1...	28	4.3
37	CORC_BUCAI (P57518) Magnesium and cobalt efflux protein corC	28	4.3
38	Y1404_METJA (Q58799) Hypothetical protein MJ1404	28	4.3
39	Y1254_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254	28	5.6
40	CORC_BUCBP (Q89AC1) Magnesium and cobalt efflux protein corC	28	5.6
41	Y1426_METJA (Q58821) Hypothetical protein MJ1426	28	5.6
42	HLYC_TREHY (Q54318) Hemolysin C	28	5.6
43	CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC	28	5.6
44	AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 su...	28	7.3
45	IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1...	28	7.3
46	IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1...	28	7.3
47	HSP1_PANTR (P35309) Sperm protamine P1 (Cysteine-rich protamine)	27	9.5
48	Y260_SYNY3 (P74409) Hypothetical UPF0053 protein sll0260	27	9.5

>KING1_ARATH (Q8LBB2) SNF1-related protein kinase regulatory gamma subunit 1|
           (AKIN gamma1) (AKING1)
          Length = 424

 Score = 84.7 bits (208), Expect = 5e-17
 Identities = 42/71 (59%), Positives = 49/71 (69%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGDFFD 167
           VI C +           D+ KIHR YVVDD G+ EG+ITLRDII++LVHEP  YFGDFFD
Sbjct: 354 VIACTKNHTLKELILMLDAEKIHRIYVVDDFGNLEGLITLRDIIARLVHEPSGYFGDFFD 413

Query: 166 GVVPLPANSTV 134
           GV+PLP N  V
Sbjct: 414 GVMPLPENYRV 424

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>SNF4_YEAST (P12904) Nuclear protein SNF4 (Regulatory protein CAT3)|
          Length = 322

 Score = 35.4 bits (80), Expect = 0.035
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLV 203
           V TC +              ++HR +VVDD G   GV+TL DI+  ++
Sbjct: 271 VYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 318

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>SNF4_KLULA (Q9P869) Nuclear protein SNF4|
          Length = 328

 Score = 34.3 bits (77), Expect = 0.078
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLV 203
           V TC               +++HR +VVD  G   GV+TL DI+  ++
Sbjct: 277 VFTCTENDKLSSILDTVRKSRVHRFFVVDSNGFLTGVLTLSDILKYIL 324

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>YL28_SCHPO (Q10343) Hypothetical protein C1556.08c in chromosome I|
          Length = 334

 Score = 33.9 bits (76), Expect = 0.10
 Identities = 13/50 (26%), Positives = 28/50 (56%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           V TC+              +++HR +VVD+    EG+++L DI++ ++++
Sbjct: 267 VHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIYD 316

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>YUGS_BACSU (O05241) Hypothetical UPF0053 protein yugS|
          Length = 434

 Score = 33.1 bits (74), Expect = 0.17
 Identities = 14/32 (43%), Positives = 22/32 (68%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPR 191
           +IH   +VD+ G T G++T+ DII ++V E R
Sbjct: 313 RIHMAILVDEYGGTAGLVTVEDIIEEIVGEIR 344

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>YHDP_BACSU (O07585) Hypothetical UPF0053 protein yhdP|
          Length = 444

 Score = 31.6 bits (70), Expect = 0.51
 Identities = 13/35 (37%), Positives = 22/35 (62%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYF 182
           ++H   + D+ G T G++T+ DII ++V E R  F
Sbjct: 311 RVHMAILSDEYGGTAGLVTVEDIIEEIVGEIRDEF 345

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>YHDT_BACSU (O07589) Hypothetical UPF0053 protein yhdT|
          Length = 461

 Score = 31.2 bits (69), Expect = 0.66
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           +IH   + D+ G T G++T  DI+ ++V E R  F +
Sbjct: 314 RIHMAILSDEYGGTSGLVTTEDILEEIVGEIRDEFDE 350

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>Y1842_MYCTU (Q50592) Hypothetical UPF0053 protein Rv1842c/MT1890|
          Length = 455

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 15/45 (33%), Positives = 25/45 (55%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGDFFDGVV 158
           ++ +    VVD+ G T G++TL D+I ++V + R    D    VV
Sbjct: 311 ASALQTAMVVDEYGGTAGMVTLEDLIEEIVGDVRDEHDDATPDVV 355

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>IMDH_METJA (Q59011) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 496

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISK 209
           DV+  K             + ++ R  +VDD+    G+ITLRDI+ +
Sbjct: 159 DVVCAKEDVEEEEALELMYANRVERLPIVDDENRLIGIITLRDILKR 205

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>Y107_HAEIN (Q57017) Hypothetical UPF0053 protein HI0107|
          Length = 420

 Score = 30.8 bits (68), Expect = 0.86
 Identities = 15/38 (39%), Positives = 22/38 (57%)
 Frame = -1

Query: 268 VVDDKGDTEGVITLRDIISKLVHEPRHYFGDFFDGVVP 155
           VVD+ GD +G++TL DI+ ++V       GDF     P
Sbjct: 306 VVDEYGDIKGLVTLEDILEEIV-------GDFTTSTAP 336

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>YRKA_BACSU (P54428) Hypothetical UPF0053 protein yrkA|
          Length = 434

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 13/35 (37%), Positives = 21/35 (60%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYF 182
           + H   +VD+ G T G++T  DI+ ++V E R  F
Sbjct: 313 RTHIAILVDEYGGTSGLVTAEDILEEIVGEIRDEF 347

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>Y740_RICPR (O05961) Hypothetical UPF0053 protein RP740|
          Length = 303

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 11/28 (39%), Positives = 20/28 (71%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           + H   VVD+ G T+G++T+ D+I ++V
Sbjct: 170 RTHIAIVVDEYGGTDGLVTIEDLIEEIV 197

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>CORC_VIBCH (Q9KTE3) Magnesium and cobalt efflux protein corC|
          Length = 291

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/37 (32%), Positives = 21/37 (56%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           + H   VVD+ G   G++T+ DI+ ++V +    F D
Sbjct: 160 RYHMAIVVDEFGGVSGLVTIEDILEEIVGDIEDEFDD 196

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>CORC_PASMU (Q9CM13) Magnesium and cobalt efflux protein corC|
          Length = 300

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           S + H   VVD+ G   G++T+ DI+ ++V +    F +
Sbjct: 162 SERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDE 200

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>CORC_HAEIN (Q57368) Magnesium and cobalt efflux protein corC|
          Length = 299

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 12/39 (30%), Positives = 22/39 (56%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           S + H   VVD+ G   G++T+ DI+ ++V +    F +
Sbjct: 162 SERFHMAIVVDEFGAVSGLVTIEDILEQIVGDIEDEFDE 200

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>AAKG2_MOUSE (Q91WG5) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 566

 Score = 29.6 bits (65), Expect = 1.9
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V+ C +              ++HR  VV++     G+I+L DI+  L+  P
Sbjct: 505 VVKCSKLETLETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTP 555

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>AAKG2_HUMAN (Q9UGJ0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2) (H91620p)
          Length = 569

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V+ C +              ++HR  VV++     G+I+L DI+  L+  P
Sbjct: 508 VVKCNKLEILETIVDRIVRAEVHRLVVVNEADSIVGIISLSDILQALILTP 558

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>YC19_KLEPN (Q48445) Hypothetical UPF0053 protein in cps region (ORF19)|
           (Fragment)
          Length = 320

 Score = 29.3 bits (64), Expect = 2.5
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKL 206
           + H  +VVD+ G  EG++TL D++  +
Sbjct: 210 RTHFAFVVDEFGSVEGIVTLSDVMETI 236

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>AAKG3_MOUSE (Q8BGM7) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V++C+               ++HR  +VD+     GV++L DI+  LV  P
Sbjct: 431 VLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 481

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>AAKG3_HUMAN (Q9UGI9) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 489

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V++C+               ++HR  +VD+     GV++L DI+  LV  P
Sbjct: 431 VLSCQPHESLGEVIDRIAREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 481

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>YEGH_SHIFL (Q83KI8) Hypothetical UPF0053 protein yegH|
          Length = 527

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDI 218
           + + H  +VVD+ G  EG++TL D+
Sbjct: 393 NARTHFAFVVDEFGSVEGIVTLSDV 417

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>YEGH_ECOLI (P76389) Hypothetical UPF0053 protein yegH|
          Length = 527

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDI 218
           + + H  +VVD+ G  EG++TL D+
Sbjct: 393 NARTHFAFVVDEFGSVEGIVTLSDV 417

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>IMDH_CHLVI (O50316) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 493

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDI 218
           D+IT +               KI +  V+D++G  +G+IT +DI
Sbjct: 161 DLITAQEDIDLLAAEEILMQNKIEKLLVIDEEGYLKGLITFKDI 204

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>CORC_SHIFL (P0AE81) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>CORC_SALTY (P0A2L3) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>CORC_SALTI (P0A2L4) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>CORC_ECOLI (P0AE78) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>CORC_ECOL6 (P0AE79) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>CORC_ECO57 (P0AE80) Magnesium and cobalt efflux protein corC|
          Length = 292

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHE 197
           S + H   V+D+ G   G++T+ DI+  +V E
Sbjct: 160 SQRYHMAIVIDEFGGVSGLVTIEDILELIVGE 191

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>AAKG1_PIG (Q09138) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg) (38 kDa subunit)
          Length = 330

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           ++HR  VVD+    +G+++L DI+  LV
Sbjct: 296 EVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG1_BOVIN (P58108) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           ++HR  VVD+    +G+++L DI+  LV
Sbjct: 296 EVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG1_HUMAN (P54619) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 331

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           ++HR  VVD+    +G+++L DI+  LV
Sbjct: 296 EVHRLVVVDENDVVKGIVSLSDILQALV 323

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>AAKG3_PIG (Q9MYP4) 5'-AMP-activated protein kinase, gamma-3 subunit (AMPK|
           gamma-3 chain) (AMPK gamma3)
          Length = 514

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 14/51 (27%), Positives = 24/51 (47%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V++C+               ++HR  +VD+     GV++L DI+  LV  P
Sbjct: 456 VLSCQPHETLGEVIDRIVREQVHRLVLVDETQHLLGVVSLSDILQALVLSP 506

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>AAKG1_RAT (P80385) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           ++HR  VVD+    +G+++L DI+  LV
Sbjct: 295 EVHRLVVVDEHDVVKGIVSLSDILQALV 322

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>AAKG1_MOUSE (O54950) 5'-AMP-activated protein kinase, gamma-1 subunit (AMPK|
           gamma-1 chain) (AMPKg)
          Length = 330

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 11/28 (39%), Positives = 19/28 (67%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLV 203
           ++HR  VVD+    +G+++L DI+  LV
Sbjct: 295 EVHRLVVVDEHDVVKGIVSLSDILQALV 322

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>IMDH_CHLTE (Q8KCW4) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 494

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/44 (27%), Positives = 21/44 (47%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDI 218
           +++T K               KI +  ++DD G  +G+IT +DI
Sbjct: 161 NLVTAKEGIDLLTAEDILMRNKIEKLLIIDDNGYLKGLITFKDI 204

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>CORC_BUCAI (P57518) Magnesium and cobalt efflux protein corC|
          Length = 291

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 292 STKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           S + H   V+D+ G   G++T+ DI+  +V E    + D
Sbjct: 159 SKRNHMAIVIDEFGAVSGLVTIEDILELIVGEIEDEYDD 197

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>Y1404_METJA (Q58799) Hypothetical protein MJ1404|
          Length = 421

 Score = 28.5 bits (62), Expect = 4.3
 Identities = 17/62 (27%), Positives = 25/62 (40%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGDFF 170
           +VIT                  I R  VVDD+G+  G++T  DI+ K+    +      F
Sbjct: 142 NVITINENDSIGKARALMRDNNIGRLVVVDDEGNPVGMVTEVDILKKVFKPKKKMTAGEF 201

Query: 169 DG 164
            G
Sbjct: 202 KG 203

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>Y1254_SYNY3 (P74078) Hypothetical UPF0053 protein sll1254|
          Length = 346

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -1

Query: 280 HRXYVVDDKGDTEGVITLRDIISKLVHE 197
           H   V+D+ G   GVITL D++  L  E
Sbjct: 289 HLMVVIDEYGGVAGVITLEDVVEVLTGE 316

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>CORC_BUCBP (Q89AC1) Magnesium and cobalt efflux protein corC|
          Length = 282

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 289 TKIHRXYVVDDKGDTEGVITLRDIISKLV 203
           TK H   V+D+ G   G++T+ DI+  +V
Sbjct: 160 TKNHMAIVIDEFGVVSGLVTIEDILELIV 188

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>Y1426_METJA (Q58821) Hypothetical protein MJ1426|
          Length = 168

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 15/48 (31%), Positives = 21/48 (43%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLV 203
           VI  K                I R  VVDD+G+  G++T  D+I  L+
Sbjct: 121 VIVAKPDMTINDAAKLMVKNNIKRLPVVDDEGNLIGIVTRGDLIEALI 168

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>HLYC_TREHY (Q54318) Hemolysin C|
          Length = 268

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 9/37 (24%), Positives = 23/37 (62%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           +IH   VVD+ G   G++++ D++ +++ + R  + +
Sbjct: 138 QIHIAMVVDEYGGFSGIVSMEDVLEQIIGDIRDEYDE 174

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>CORC_BUCAP (Q8K9C0) Magnesium and cobalt efflux protein corC|
          Length = 291

 Score = 28.1 bits (61), Expect = 5.6
 Identities = 11/35 (31%), Positives = 20/35 (57%)
 Frame = -1

Query: 280 HRXYVVDDKGDTEGVITLRDIISKLVHEPRHYFGD 176
           H   V+D+ G   G++T+ DI+  +V E +  + D
Sbjct: 163 HMAIVIDEFGAVSGLVTIEDILELIVGEIQDEYDD 197

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>AAKG2_PONPY (Q5R4S0) 5'-AMP-activated protein kinase, gamma-2 subunit (AMPK|
           gamma-2 chain) (AMPK gamma2)
          Length = 524

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 12/51 (23%), Positives = 22/51 (43%)
 Frame = -1

Query: 346 VITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISKLVHEP 194
           V+ C +              ++HR  V ++     G+I+L DI+  L+  P
Sbjct: 463 VVKCNKLEILETIVDRIVRAEVHRLVVANEADSIVGIISLSDILQALILTP 513

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>IMDH_PYRHO (O58045) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 486

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 13/47 (27%), Positives = 23/47 (48%)
 Frame = -1

Query: 349 DVITCKRXXXXXXXXXXXDSTKIHRXYVVDDKGDTEGVITLRDIISK 209
           +VIT                 +I R  VVD++G   G+IT+ D++++
Sbjct: 159 EVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITMSDLVAR 205

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>IMDH_AQUAE (O67820) Inosine-5'-monophosphate dehydrogenase (EC 1.1.1.205) (IMP|
           dehydrogenase) (IMPDH) (IMPD)
          Length = 490

 Score = 27.7 bits (60), Expect = 7.3
 Identities = 10/26 (38%), Positives = 19/26 (73%)
 Frame = -1

Query: 286 KIHRXYVVDDKGDTEGVITLRDIISK 209
           KI +  +VD +G  +G+IT++DI+ +
Sbjct: 183 KIEKLPIVDKEGKIKGLITIKDIVKR 208

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>HSP1_PANTR (P35309) Sperm protamine P1 (Cysteine-rich protamine)|
          Length = 50

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 16/44 (36%), Positives = 23/44 (52%)
 Frame = +1

Query: 46  KDKLHSNLTRRRGRSKR*CTFSYRVQRFVIRYCLRVGERRRRRN 177
           + +  S   R+R RS+R    S + QR  +R C R    RRRR+
Sbjct: 7   RSQSRSRCYRQRQRSRRRKRQSCQTQRRAMRCCRRRSRMRRRRH 50

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>Y260_SYNY3 (P74409) Hypothetical UPF0053 protein sll0260|
          Length = 448

 Score = 27.3 bits (59), Expect = 9.5
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = -1

Query: 280 HRXYVVDDKGDTEGVITLRDIISKLV 203
           H   + D+ G  EG++TL D+I  +V
Sbjct: 312 HLALITDEYGGIEGLVTLNDLIEAIV 337


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,789,944
Number of Sequences: 219361
Number of extensions: 718208
Number of successful extensions: 1954
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 1904
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1942
length of database: 80,573,946
effective HSP length: 91
effective length of database: 60,612,095
effective search space used: 1454690280
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result