Clone Name | rbasd11n19 |
---|---|
Clone Library Name | barley_pub |
>gb|AY167561.1| Hordeum vulgare subsp. vulgare GAMYB-binding protein (kgm) mRNA, complete cds Length = 2320 Score = 1031 bits (520), Expect = 0.0 Identities = 523/524 (99%) Strand = Plus / Minus Query: 1 gccgcttgggctcgcacacaaataacacaaagcatatatatcatcgtccaagtttctcac 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2215 gccgcttgggctcgcacacaaataacacaaagcatatatatcatcgtccaagtttctcac 2156 Query: 61 actcgaaagcccaaaggaaacacagcagtgctcttcactctccccgctgcaatgcgaagc 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct: 2155 actcgaaagcccaaaggaaacacagcagtgctcttcactctccccgctgcaatgccaagc 2096 Query: 121 gaggaccgggggagactggattttattttcaatcacaacacaagcgatgaaagagagaca 180 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2095 gaggaccgggggagactggattttattttcaatcacaacacaagcgatgaaagagagaca 2036 Query: 181 caaacttggcagcgaccgccaggaaggagatcgccggattattgtggtcggggtggtggt 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2035 caaacttggcagcgaccgccaggaaggagatcgccggattattgtggtcggggtggtggt 1976 Query: 241 ggtggtgtcgatgatgcgaagaggcagatggatggcagaagggcgggcgtcggtgggatg 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1975 ggtggtgtcgatgatgcgaagaggcagatggatggcagaagggcgggcgtcggtgggatg 1916 Query: 301 gtcctcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgc 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1915 gtcctcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgc 1856 Query: 361 gccggaaggggtcgtttcgggcatgccacgtgtccctgggtcccagaggcacgggccgcc 420 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1855 gccggaaggggtcgtttcgggcatgccacgtgtccctgggtcccagaggcacgggccgcc 1796 Query: 421 tcacgggctccccgtgggctctggtagtggccttcaggtccacaaacctgtcggaaggca 480 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1795 tcacgggctccccgtgggctctggtagtggccttcaggtccacaaacctgtcggaaggca 1736 Query: 481 tgatcggcgcccggtttgtggtggaggacatcgacagctgggac 524 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1735 tgatcggcgcccggtttgtggtggaggacatcgacagctgggac 1692
>ref|XM_550513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2919 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 305 tcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgcgccg 364 |||||| ||||||||||| | |||| |||||| ||||| |||||||| || | |||||| Sbjct: 2340 tcagctaacgagcttcctgggaaggaaagccctgtcgcctggcatctcgtatgggcgccg 2281 Query: 365 gaaggggtcg 374 |||||||||| Sbjct: 2280 gaaggggtcg 2271
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 305 tcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgcgccg 364 |||||| ||||||||||| | |||| |||||| ||||| |||||||| || | |||||| Sbjct: 890873 tcagctaacgagcttcctgggaaggaaagccctgtcgcctggcatctcgtatgggcgccg 890814 Query: 365 gaaggggtcg 374 |||||||||| Sbjct: 890813 gaaggggtcg 890804 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 22786332 gtggtgggggtggtggtggtggtg 22786355
>emb|AJ315901.1|OSA315901 Oryza sativa DNA, clone F10 (C4) Length = 13914 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Plus Query: 305 tcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgcgccg 364 |||||| ||||||||||| | |||| |||||| ||||| |||||||| || | |||||| Sbjct: 2701 tcagctaacgagcttcctgggaaggaaagccctgtcgcctggcatctcgtatgggcgccg 2760 Query: 365 gaaggggtcg 374 |||||||||| Sbjct: 2761 gaaggggtcg 2770
>dbj|AP002837.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019F11 Length = 123673 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 305 tcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgcgccg 364 |||||| ||||||||||| | |||| |||||| ||||| |||||||| || | |||||| Sbjct: 71768 tcagctaacgagcttcctgggaaggaaagccctgtcgcctggcatctcgtatgggcgccg 71709 Query: 365 gaaggggtcg 374 |||||||||| Sbjct: 71708 gaaggggtcg 71699
>dbj|AK069526.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025B11, full insert sequence Length = 2918 Score = 60.0 bits (30), Expect = 8e-06 Identities = 60/70 (85%) Strand = Plus / Minus Query: 305 tcagctgacgagcttcctttggaggagagccctctcgcccggcatctcataggtgcgccg 364 |||||| ||||||||||| | |||| |||||| ||||| |||||||| || | |||||| Sbjct: 2339 tcagctaacgagcttcctgggaaggaaagccctgtcgcctggcatctcgtatgggcgccg 2280 Query: 365 gaaggggtcg 374 |||||||||| Sbjct: 2279 gaaggggtcg 2270
>gb|AC107933.6| Homo sapiens chromosome 8, clone RP11-959C6, complete sequence Length = 208341 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggtgtcgatgatg 256 ||||||||| |||||||||||||||| |||||||| Sbjct: 112769 ttgtggtcgtggtggtggtggtggtgacgatgatg 112735
>dbj|AP004712.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1819F10, complete sequence Length = 149677 Score = 54.0 bits (27), Expect = 5e-04 Identities = 33/35 (94%) Strand = Plus / Plus Query: 222 ttgtggtcggggtggtggtggtggtgtcgatgatg 256 ||||||||| |||||||||||||||| |||||||| Sbjct: 75173 ttgtggtcgtggtggtggtggtggtgacgatgatg 75207
>gb|AC158529.2| Mus musculus BAC clone RP23-263H3 from chromosome 13, complete sequence Length = 172769 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||||||||||| Sbjct: 155446 ggtggtggtggtggtgtcgatgatg 155422
>emb|CT030195.12| Mouse DNA sequence from clone RP23-191J8 on chromosome 13, complete sequence Length = 219800 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||||||||||| Sbjct: 107018 ggtggtggtggtggtgtcgatgatg 106994
>emb|AL731783.10| Mouse DNA sequence from clone RP23-124E18 on chromosome 2, complete sequence Length = 207209 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||||||||||| Sbjct: 115134 ggtggtggtggtggtgtcgatgatg 115110
>gb|AC146510.3| Pan troglodytes BAC clone RP43-64B24 from 7, complete sequence Length = 153089 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Plus Query: 141 ttttattttcaatcacaacacaa 163 ||||||||||||||||||||||| Sbjct: 65559 ttttattttcaatcacaacacaa 65581
>gb|AC010082.4| Homo sapiens BAC clone RP11-109D3 from 7, complete sequence Length = 143035 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 141 ttttattttcaatcacaacacaa 163 ||||||||||||||||||||||| Sbjct: 13520 ttttattttcaatcacaacacaa 13498
>dbj|AP001993.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-168K9, complete sequence Length = 147402 Score = 46.1 bits (23), Expect = 0.11 Identities = 23/23 (100%) Strand = Plus / Minus Query: 386 ccacgtgtccctgggtcccagag 408 ||||||||||||||||||||||| Sbjct: 10932 ccacgtgtccctgggtcccagag 10910
>ref|XM_508211.1| PREDICTED: Pan troglodytes mucin 2 (LOC450941), mRNA Length = 3759 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 3573 ggtcggggtggtggtggtggtg 3552
>gb|AY022416.1| Oryza sativa microsatellite MRG4741 containing (ACC)X8, closest to marker G56, genomic sequence Length = 224 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||||| Sbjct: 134 ttgtggttggggtggtggtggtggtg 109
>ref|NM_002457.1| Homo sapiens mucin 2, oligomeric mucus/gel-forming (MUC2), mRNA Length = 15720 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 3897 ggtcggggtggtggtggtggtg 3876
>gb|AC141426.3| Mus musculus BAC clone RP23-280I14 from chromosome 12, complete sequence Length = 227835 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatg 253 |||||||||||||||||||||| Sbjct: 45780 ggtggtggtggtggtgtcgatg 45801
>gb|AC175749.2| Pan troglodytes BAC clone CH251-1124N9 from chromosome y, complete sequence Length = 176979 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 102505 ggtcggggtggtggtggtggtg 102484
>gb|AC114676.7| Mus musculus chromosome 5, clone RP24-211H1, complete sequence Length = 153903 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtgg 245 |||||||||||||||||||||| Sbjct: 60532 gtggtcggggtggtggtggtgg 60553
>gb|AC132102.3| Mus musculus BAC clone RP24-360K9 from chromosome 5, complete sequence Length = 144545 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtgg 245 |||||||||||||||||||||| Sbjct: 134228 gtggtcggggtggtggtggtgg 134249
>gb|AC139749.4| Homo sapiens chromosome 11, clone RP13-870H17, complete sequence Length = 131676 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 53245 ggtcggggtggtggtggtggtg 53266
>gb|AC087886.11| Homo sapiens 12 BAC RP11-578A9 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 191923 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 222 ttgtggtcggggtggtggtggtggtg 247 ||||||||| |||||||||||||||| Sbjct: 26614 ttgtggtcgtggtggtggtggtggtg 26639
>ref|XM_926004.1| PREDICTED: Homo sapiens similar to Mucin-2 precursor (Intestinal mucin 2) (LOC642507), mRNA Length = 8604 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 3870 ggtcggggtggtggtggtggtg 3849
>gb|AC144908.17| Mus musculus chromosome 5, clone RP23-102O19, complete sequence Length = 212299 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Plus Query: 218 attattgtggtcggggtggtggtggtggtg 247 ||||||||||| | |||||||||||||||| Sbjct: 105148 attattgtggtggtggtggtggtggtggtg 105177
>dbj|AK028793.1| Mus musculus 10 days neonate skin cDNA, RIKEN full-length enriched library, clone:4732456P06 product:unclassifiable, full insert sequence Length = 3740 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatg 253 |||||||||||||||||||||| Sbjct: 3135 ggtggtggtggtggtgtcgatg 3114
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||||| Sbjct: 26237110 ttgtggttggggtggtggtggtggtg 26237085
>gb|AC155819.2| Mus musculus BAC clone RP23-402F16 from chromosome 12, complete sequence Length = 201181 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 94033 ggtcggggtggtggtggtggtg 94054
>gb|AY846825.1| Triticum aestivum ribosomal protein L30 mRNA, complete cds Length = 341 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 231 gggtggtggtggtggtgtcgatgatg 256 |||||||||||||||||| ||||||| Sbjct: 335 gggtggtggtggtggtgttgatgatg 310
>dbj|AP003857.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1014_E06 Length = 112241 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||||| Sbjct: 70035 ttgtggttggggtggtggtggtggtg 70010
>gb|AC083910.9| Mus musculus 1 BAC RP23-337F12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 208408 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 218 attattgtggtcggggtggtggtggtggtg 247 ||||||||||| | |||||||||||||||| Sbjct: 182043 attattgtggtggtggtggtggtggtggtg 182014 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 169290 gggtggtggtggtggtgtcg 169271
>gb|AC087780.19| Mus musculus strain C57BL/6J chromosome 1 clone rp23-324b17, complete sequence Length = 206924 Score = 44.1 bits (22), Expect = 0.45 Identities = 28/30 (93%) Strand = Plus / Minus Query: 218 attattgtggtcggggtggtggtggtggtg 247 ||||||||||| | |||||||||||||||| Sbjct: 71315 attattgtggtggtggtggtggtggtggtg 71286
>gb|L21998.1|HUMMUC2X Homo sapiens intestinal mucin (MUC2) mRNA, complete cds Length = 15720 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 3897 ggtcggggtggtggtggtggtg 3876
>gb|M94131.1|HUMIMUCA Human mucin 2 (MUC2) mRNA, partial cds Length = 3811 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggtg 247 |||||||||||||||||||||| Sbjct: 1996 ggtcggggtggtggtggtggtg 1975
>ref|XM_630717.1| Dictyostelium discoideum hypothetical protein (DDB0188846), partial mRNA Length = 2439 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||| ||||||| Sbjct: 1283 ggtggtggtggtggtgttgatgatg 1259
>ref|XM_467635.1| Oryza sativa (japonica cultivar-group), mRNA Length = 909 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 108 gtcggggtggtggtggtggtg 88
>ref|NM_018798.2| Mus musculus ubiquilin 2 (Ubqln2), mRNA Length = 3343 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 1270 ttgtggtcgtggtggtggtggtggt 1246
>gb|AC109257.8| Mus musculus chromosome 7, clone RP23-362F15, complete sequence Length = 158694 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||| ||||||||||||||||||| Sbjct: 89183 gtggtgggggtggtggtggtggtgt 89207
>gb|AC158554.6| Mus musculus chromosome 15, clone RP23-353O17, complete sequence Length = 192019 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||| ||||||| Sbjct: 148666 ggtggtggtggtggtgttgatgatg 148690
>gb|AC113158.3| Mus musculus BAC clone RP23-101D11 from chromosome 9, complete sequence Length = 188085 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtgt 248 |||| |||||||||||||||||||| Sbjct: 113212 gtgggcggggtggtggtggtggtgt 113236
>gb|BC053022.1| Mus musculus ubiquilin 2, mRNA (cDNA clone MGC:62228 IMAGE:5708544), complete cds Length = 3343 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 1270 ttgtggtcgtggtggtggtggtggt 1246
>ref|XM_329516.1| Neurospora crassa OR74A hypothetical protein (NCU08472.1) partial mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||||||| |||| Sbjct: 699 ggtggtggtggtggtgtcgaggatg 675
>ref|XM_955921.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||| |||||||||||||||||||| Sbjct: 124 ggtgatggtggtggtgtcgatgatg 100
>ref|XM_958221.1| Neurospora crassa OR74A hypothetical protein (NCU08472.1) partial mRNA Length = 1323 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||||||| |||| Sbjct: 699 ggtggtggtggtggtgtcgaggatg 675
>ref|XM_959817.1| Neurospora crassa OR74A hypothetical protein (NCU09093.1) partial mRNA Length = 1782 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtcgatgatgcg 258 |||||||||||||||| | |||||||||| Sbjct: 1712 ggggtggtggtggtggcgccgatgatgcg 1740
>ref|XM_326984.1| Neurospora crassa OR74A hypothetical protein (NCU06699.1) partial mRNA Length = 1500 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||| |||||||||||||||||||| Sbjct: 124 ggtgatggtggtggtgtcgatgatg 100
>gb|AC119954.12| Mus musculus chromosome 1, clone RP24-450P2, complete sequence Length = 179212 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 71678 ggtggtggtggtggtggcgatgatg 71654
>ref|XM_331484.1| Neurospora crassa OR74A hypothetical protein (NCU09093.1) partial mRNA Length = 1782 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtcgatgatgcg 258 |||||||||||||||| | |||||||||| Sbjct: 1712 ggggtggtggtggtggcgccgatgatgcg 1740
>gb|AC125156.3| Mus musculus BAC clone RP24-386H5 from chromosome 18, complete sequence Length = 189554 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 229 cggggtggtggtggtggtgtc 249 ||||||||||||||||||||| Sbjct: 175518 cggggtggtggtggtggtgtc 175498
>gb|AC160529.6| Mus musculus chromosome 1, clone RP24-141F19, complete sequence Length = 167687 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 161345 ggtggtggtggtggtggcgatgatg 161369
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 10666333 gtcggggtggtggtggtggtg 10666353
>ref|XM_540774.2| PREDICTED: Canis familiaris similar to Mucin-2 precursor (Intestinal mucin 2) (LOC483653), mRNA Length = 4128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 3860 gtcggggtggtggtggtggtg 3840
>ref|XM_535925.2| PREDICTED: Canis familiaris similar to TPR domain, ankyrin-repeat and coiled-coil-containing (LOC478760), mRNA Length = 4926 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtcg 250 ||||||||||||||||||||| Sbjct: 161 ggggtggtggtggtggtgtcg 181
>gb|AC133648.3| Mus musculus BAC clone RP23-291B1 from chromosome 7, complete sequence Length = 207234 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 ttattgtggtcggggtggtggtggtggtg 247 |||||||||| | |||||||||||||||| Sbjct: 130219 ttattgtggtggtggtggtggtggtggtg 130247
>gb|AC125375.3| Mus musculus BAC clone RP23-464K21 from chromosome 14, complete sequence Length = 198193 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 126581 ggtggtggtggtggtgacgatgatg 126605
>gb|AC125486.4| Mus musculus BAC clone RP23-21G7 from chromosome 10, complete sequence Length = 222316 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 195508 gtggtcgtggtggtggtggtggtgt 195484
>gb|AC124171.3| Mus musculus BAC clone RP23-167E23 from chromosome 13, complete sequence Length = 198242 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 221 attgtggtcggggtggtggtggtggtgtc 249 |||||||| | |||||||||||||||||| Sbjct: 155843 attgtggtggtggtggtggtggtggtgtc 155871
>gb|AC131722.4| Mus musculus BAC clone RP23-143M5 from chromosome 9, complete sequence Length = 228144 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 92769 ggtggtggtggtggtgacgatgatg 92745
>gb|AC073594.31| Homo sapiens 12 BAC RP11-972K6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 81410 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 57601 ggtggtggtggtggtgacgatgatg 57577
>gb|AC124465.6| Mus musculus BAC clone RP24-156M16 from chromosome 13, complete sequence Length = 169973 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 221 attgtggtcggggtggtggtggtggtgtc 249 |||||||| | |||||||||||||||||| Sbjct: 148436 attgtggtggtggtggtggtggtggtgtc 148408
>gb|AC124743.5| Mus musculus BAC clone RP23-219C1 from 1, complete sequence Length = 220167 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 190320 gtggtcgtggtggtggtggtggtgt 190344
>gb|AC122274.4| Mus musculus BAC clone RP23-228J3 from 14, complete sequence Length = 192135 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 112577 ggtggtggtggtggtgacgatgatg 112553
>gb|AC126695.4| Mus musculus BAC clone RP23-313D2 from 18, complete sequence Length = 171427 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgtc 249 ||||||||||||||||||||| Sbjct: 162356 cggggtggtggtggtggtgtc 162376
>gb|AC148348.6| Medicago truncatula clone mth2-28b4, complete sequence Length = 118633 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||| ||||||| Sbjct: 52565 ggtggtggtggtggtgttgatgatg 52541
>gb|AC137267.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0032G21, from chromosome 3, complete sequence Length = 187621 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 83247 gtcggggtggtggtggtggtg 83267
>emb|AL445592.15| Human DNA sequence from clone RP11-660M15 on chromosome 9 Contains part of the JMJD2C gene for jumonji domain containing 2C, complete sequence Length = 69706 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 21704 gtggtcgtggtggtggtggtggtgt 21680
>emb|AL359435.7| Human DNA sequence from clone RP11-530J24 on chromosome 1, complete sequence Length = 156947 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 58212 gtcggggtggtggtggtggtg 58192
>emb|AL137127.7| Human DNA sequence from clone RP5-1126H10 on chromosome 1p34.3-35.3 Contains the 3' end of the gene for retinoblastoma-associated factor 600 (RBAF600), complete sequence Length = 98832 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 3698 ggtggtggtggtggtggcgatgatg 3674
>gb|AC163448.2| Mus musculus chromosome 1, clone RP24-327O21, complete sequence Length = 150247 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 65554 gtggtcgtggtggtggtggtggtgt 65530
>emb|AL604065.7| Mouse DNA sequence from clone RP23-20M18 on chromosome 11 Contains the genes for olfactory receptors MOR255-4, -5, -6 and MOR125-1, the Olfr43 gene for olfactory receptor 43, six olfactory receptor pseudogenes, the Olfr59 gene for olfactory receptor 59, a glyceraldehyde-3-phosphate dehydrogenase (Gapd) pseudogene, the gene for a novel olfactory receptor, the 3' end of the gene for a novel protein similar to human RAP1 GTPase activating protein 1 RAP1GA1 and two CpG islands, complete sequence Length = 254938 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 ttattgtggtcggggtggtggtggtggtg 247 |||||||||| | |||||||||||||||| Sbjct: 101741 ttattgtggtggtggtggtggtggtggtg 101769
>emb|BX294020.1|NC7F4 Neurospora crassa DNA linkage group V Cosmid contig 7F4 Length = 115416 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||| |||||||||||||||||||| Sbjct: 70216 ggtgatggtggtggtgtcgatgatg 70240
>emb|AL356324.1|NCB9J10 Neurospora crassa DNA linkage group II BAC clone B9J10 Length = 66924 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||||||| |||| Sbjct: 23649 ggtggtggtggtggtgtcgaggatg 23625
>emb|AL033502.1|CAC38F10 C.albicans cosmid Ca38F10 Length = 39871 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Minus Query: 218 attattgtggtcggggtggtggtggtggt 246 ||||||||||| | ||||||||||||||| Sbjct: 17824 attattgtggtggtggtggtggtggtggt 17796
>emb|CR522883.10| Zebrafish DNA sequence from clone CH211-120K24 in linkage group 16, complete sequence Length = 79782 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 caaataacacaaagcatatat 39 ||||||||||||||||||||| Sbjct: 29026 caaataacacaaagcatatat 29006
>ref|NM_135793.2| Drosophila melanogaster CG16970-RA (CG16970), mRNA Length = 2127 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 1384 ggtcggggtggtggtggtggt 1404
>gb|AC095059.3| Homo sapiens BAC clone RP11-428L21 from 4, complete sequence Length = 109586 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 139 gattttattttcaatcacaac 159 ||||||||||||||||||||| Sbjct: 5290 gattttattttcaatcacaac 5270
>gb|AC153570.9| Mus musculus 10 BAC RP23-221F6 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 216030 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||| ||||||| Sbjct: 102632 ggtggtggtggtggtgttgatgatg 102656
>gb|AC158299.7| Mus musculus chromosome 7, clone RP24-271L24, complete sequence Length = 185347 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||||| ||||| Sbjct: 133403 ggtggtggtggtggtgtcgttgatg 133427
>gb|AC154546.2| Mus musculus BAC clone RP23-431I7 from chromosome 16, complete sequence Length = 180261 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 69045 ggtcggggtggtggtggtggt 69025
>gb|AC154691.3| Mus musculus BAC clone RP24-336F24 from chromosome 16, complete sequence Length = 178904 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 172862 ggtcggggtggtggtggtggt 172842
>gb|BC021824.1| Mus musculus ubiquilin 2, mRNA (cDNA clone IMAGE:4009660), partial cds Length = 2758 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 655 ttgtggtcgtggtggtggtggtggt 631
>gb|AC008090.3|AC008090 Drosophila melanogaster, chromosome 3R, region 93E-93F, BAC clone BACR16N15, complete sequence Length = 172390 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 25691 gtggtcgtggtggtggtggtggtgt 25667
>dbj|AK076159.1| Mus musculus 14, 17 days embryo head cDNA, RIKEN full-length enriched library, clone:3200002H06 product:ubiquilin 2, full insert sequence Length = 3310 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 1274 ttgtggtcgtggtggtggtggtggt 1250
>gb|AC006936.17|AC006936 Drosophila melanogaster, chromosome 3R, region 93E4-93E7, BAC clone BACR48I01, complete sequence Length = 170535 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 148615 gtggtcgtggtggtggtggtggtgt 148591
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 10664434 gtcggggtggtggtggtggtg 10664454
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 30554713 gtcggggtggtggtggtggtg 30554733 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 29877792 gtcggggtggtggtggtggtg 29877772
>gb|AC009340.4|AC009340 Drosophila melanogaster, chromosome 2L, region 34A-34E, BAC clone BACR04E19, complete sequence Length = 197159 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 97960 ggtcggggtggtggtggtggt 97940
>emb|AJ311612.1|MMU311612 Mus musculus partial gene for NH3-dependent NAD+ synthetase-like protein, exons 1-10 Length = 109996 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 ||||||||||||||||||| ||||| Sbjct: 67376 ggtggtggtggtggtgtcgttgatg 67352
>dbj|AP004040.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1008_D06 Length = 112768 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 34757 gtcggggtggtggtggtggtg 34737
>dbj|AP005319.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0643A10 Length = 187931 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 66721 gtcggggtggtggtggtggtg 66741
>dbj|AK121396.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023131E09, full insert sequence Length = 3234 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 64 gtcggggtggtggtggtggtg 44
>dbj|AK111722.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023029C05, full insert sequence Length = 909 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 108 gtcggggtggtggtggtggtg 88
>gb|AF177346.1|AF177346 Mus musculus PLIC-2 mRNA, complete cds Length = 2298 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 1271 ttgtggtcgtggtggtggtggtggt 1247
>gb|AE003735.2| Drosophila melanogaster chromosome 3R, section 73 of 118 of the complete sequence Length = 255463 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 150452 gtggtcgtggtggtggtggtggtgt 150428
>gb|AE003639.3| Drosophila melanogaster chromosome 2L, section 48 of 83 of the complete sequence Length = 261775 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 188060 ggtcggggtggtggtggtggt 188040
>gb|AC005443.1|AC005443 Drosophila melanogaster, chromosome 2L, region 34B5-34B9, P1 clone DS05554, complete sequence Length = 81194 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 630 ggtcggggtggtggtggtggt 610
>gb|AC109163.16| Mus musculus chromosome 8, clone RP24-174F12, complete sequence Length = 189849 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgat 252 ||||||||||||||||||||| Sbjct: 74803 ggtggtggtggtggtgtcgat 74823
>dbj|AP003156.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-56O15, complete sequences Length = 162128 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 150688 ggtcggggtggtggtggtggt 150708
>dbj|AP003150.1| Mus musculus genomic DNA, chromosome 16q clone:RP21-215C1, complete sequences Length = 150724 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 18022 ggtcggggtggtggtggtggt 18042
>gb|AC129085.6| Mus musculus BAC clone RP23-293B11 from 13, complete sequence Length = 206677 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtggt 246 ||||||||||||||||||||| Sbjct: 52308 ggtcggggtggtggtggtggt 52288
>emb|AL807796.16| Mouse DNA sequence from clone RP23-167I12 on chromosome 4, complete sequence Length = 168268 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 223 tgtggtcggggtggtggtggtggtg 247 |||||||| |||||||||||||||| Sbjct: 19781 tgtggtcgtggtggtggtggtggtg 19757
>gb|AC173485.1| Mus musculus BAC clone RP23-59N18 from chromosome 17, complete sequence Length = 199992 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 219 ttattgtggtcggggtggtggtggtggtg 247 |||||||||| | |||||||||||||||| Sbjct: 154177 ttattgtggtggtggtggtggtggtggtg 154205
>emb|AL935296.5| Zebrafish DNA sequence from clone CH211-281F5, complete sequence Length = 147042 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 19 caaataacacaaagcatatat 39 ||||||||||||||||||||| Sbjct: 90766 caaataacacaaagcatatat 90746
>emb|AL844583.6| Mouse DNA sequence from clone RP23-240F13 on chromosome X, complete sequence Length = 176870 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggt 246 ||||||||| ||||||||||||||| Sbjct: 6065 ttgtggtcgtggtggtggtggtggt 6041
>gb|M15892.1|FSAAPOB Petromyzon marinus blood plasma apolipoproitein LAL2 mRNA, complete cds Length = 1126 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 227 gtcggggtggtggtggtggtg 247 ||||||||||||||||||||| Sbjct: 766 gtcggggtggtggtggtggtg 786
>emb|Z35443.1|LCSHEATH2 Litomosoides sigmodontis shp2 gene for microfilarial sheath protein Length = 1880 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 1755 ggtggtggtggtggtggcgatgatg 1731
>emb|X69908.1|HSATPCP2 H.sapiens gene for mitochondrial ATP synthase c subunit (P2 form) Length = 15016 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgatg 256 |||||||||||||||| |||||||| Sbjct: 1709 ggtggtggtggtggtgacgatgatg 1733
>dbj|AB011813.1| Drosophila melanogaster genes for DNA polymerase alpha 180K subunit, E2F, complete cds Length = 65114 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtgt 248 ||||||| ||||||||||||||||| Sbjct: 65016 gtggtcgtggtggtggtggtggtgt 65040
>gb|AC117590.14| Mus musculus chromosome 3, clone RP23-225F12, complete sequence Length = 180451 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 42435 gtggtcgtggtggtggtggtggtg 42412
>gb|AC093339.17| Mus musculus chromosome 19, clone RP23-5G6, complete sequence Length = 218747 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 52108 ggggtggtggtggtggtgtc 52127
>gb|AC166709.9| Mus musculus chromosome 1, clone RP23-406B10, complete sequence Length = 175924 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 20 aaataacacaaagcatatat 39 |||||||||||||||||||| Sbjct: 90128 aaataacacaaagcatatat 90109
>gb|AY796277.1| Trichostomum tenuirostre isolate 1714 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 786 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 ttgtggtcggggtggtggtggtggtgtc 249 ||||||| | |||||||||||||||||| Sbjct: 95 ttgtggtggtggtggtggtggtggtgtc 122
>gb|AY796276.1| Pseudosymblepharis schimperiana isolate 1875 internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence Length = 787 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 222 ttgtggtcggggtggtggtggtggtgtc 249 ||||||| | |||||||||||||||||| Sbjct: 93 ttgtggtggtggtggtggtggtggtgtc 120
>ref|XM_642348.1| Dictyostelium discoideum hypothetical protein (DDB0189669), partial mRNA Length = 1065 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 394 gtggtgggggtggtggtggtggtg 371
>ref|XM_637943.1| Dictyostelium discoideum hypothetical protein (DDB0202956), partial mRNA Length = 6354 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgat 255 ||||||||||||||||| |||||| Sbjct: 4232 ggtggtggtggtggtgttgatgat 4209
>ref|NM_191021.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 555 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 72 gggtggtggtggtggtgtcg 91
>gb|AY390526.1| Cricetulus griseus external transcribed spacer, 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence Length = 8240 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 4015 gtggtcgtggtggtggtggtggtg 4038
>gb|BT016006.1| Drosophila melanogaster RE33792 full insert cDNA Length = 4642 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 2326 ggtcggggtggtggtggtgg 2345
>gb|AC162614.2| Mus musculus chromosome 7, clone RP23-421O10, complete sequence Length = 219414 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 44105 ggggtggtggtggtggtgtc 44086
>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence Length = 1130447 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 571071 gtggtcgtggtggtggtggtggtg 571094
>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence Length = 268984 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgat 255 |||||||||||||||| ||||||| Sbjct: 203886 ggtggtggtggtggtgacgatgat 203863
>gb|AF337025.1| Aphidius ervi clone 76 microsatellite sequence Length = 752 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 337 gtggtcgtggtggtggtggtggtg 314
>gb|AY023544.1| Oryza sativa microsatellite MRG5869 containing (TGG)X8, genomic sequence Length = 224 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 111 ggtggtggtggtggtgtcga 130
>gb|AC130602.5| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1122D01, complete sequence Length = 126532 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 1755 tcggggtggtggtggtggtg 1774
>gb|AC158993.2| Mus musculus BAC clone RP24-427N13 from chromosome 7, complete sequence Length = 179746 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 3526 ggggtggtggtggtggtgtc 3545
>gb|AC129716.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0068N01, complete sequence Length = 152233 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 75099 cggggtggtggtggtggtgt 75118
>gb|AC135421.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0012G21, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 134950 tcggggtggtggtggtggtg 134969
>gb|AC102595.9| Mus musculus chromosome 10, clone RP23-360M11, complete sequence Length = 223843 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 6574 gtggtcgtggtggtggtggtggtg 6597
>ref|XM_959155.1| Neurospora crassa OR74A hypothetical protein ( (AY029284) suppressor of ascus dominance [Neurospora crassa OR74A] ) (NCU02178.1) partial mRNA Length = 4917 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 4715 gtggttggggtggtggtggtggtg 4738
>gb|AC132278.3| Mus musculus BAC clone RP24-346C20 from chromosome 8, complete sequence Length = 154524 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 66046 cggggtggtggtggtggtgt 66027
>gb|AC134429.3| Mus musculus BAC clone RP24-344D20 from chromosome 9, complete sequence Length = 180602 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 tgtggtcggggtggtggtggtggtgtcg 250 |||||| | ||||||||||||||||||| Sbjct: 32127 tgtggtggtggtggtggtggtggtgtcg 32100
>ref|XM_870761.1| PREDICTED: Bos taurus similar to Protein KIAA0934 (LOC618431), mRNA Length = 297 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 163 gtggtgggggtggtggtggtggtg 186
>ref|XM_952934.1| Neurospora crassa OR74A hypothetical protein (NCU06861.1) partial mRNA Length = 1092 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgat 255 ||||||||||||||||||| |||| Sbjct: 939 ggtggtggtggtggtgtcgctgat 916
>ref|XM_953494.1| Neurospora crassa OR74A hypothetical protein (NCU09435.1) partial mRNA Length = 3504 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 3149 gtggtgggggtggtggtggtggtg 3172
>ref|XM_955032.1| Neurospora crassa OR74A hypothetical protein (NCU09786.1) partial mRNA Length = 1278 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 1147 ggtggtggtggtggtgtcga 1166
>ref|XM_955096.1| Neurospora crassa OR74A hypothetical protein (NCU09791.1) partial mRNA Length = 2733 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||||| |||||||||||||| Sbjct: 389 gtggtcgggttggtggtggtggtg 366
>ref|XM_327146.1| Neurospora crassa OR74A hypothetical protein (NCU06861.1) partial mRNA Length = 1092 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgat 255 ||||||||||||||||||| |||| Sbjct: 939 ggtggtggtggtggtgtcgctgat 916
>ref|XM_329367.1| Neurospora crassa OR74A hypothetical protein ( (AY029284) suppressor of ascus dominance [Neurospora crassa OR74A] ) (NCU02178.1) partial mRNA Length = 4917 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 4715 gtggttggggtggtggtggtggtg 4738
>ref|XM_330435.1| Neurospora crassa OR74A hypothetical protein (NCU09786.1) partial mRNA Length = 1278 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 1147 ggtggtggtggtggtgtcga 1166
>ref|XM_330440.1| Neurospora crassa OR74A hypothetical protein (NCU09791.1) partial mRNA Length = 2733 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||||| |||||||||||||| Sbjct: 389 gtggtcgggttggtggtggtggtg 366
>ref|XM_332126.1| Neurospora crassa OR74A hypothetical protein (NCU09435.1) partial mRNA Length = 3504 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 3149 gtggtgggggtggtggtggtggtg 3172
>gb|AC147132.3| Mus musculus BAC clone RP24-189K3 from chromosome 7, complete sequence Length = 189225 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 157363 gtggtcgtggtggtggtggtggtg 157340
>gb|AC142504.2| Mus musculus BAC clone RP24-132F22 from chromosome 9, complete sequence Length = 174426 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 223 tgtggtcggggtggtggtggtggtgtcg 250 |||||| | ||||||||||||||||||| Sbjct: 106980 tgtggtggtggtggtggtggtggtgtcg 106953
>gb|AC144700.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0017H17, complete sequence Length = 156331 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggt 246 |||||||||||||||||||| Sbjct: 93984 gtcggggtggtggtggtggt 93965
>gb|AC147638.2| Mus musculus BAC clone RP23-181L5 from chromosome 7, complete sequence Length = 196114 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 70181 gtggtcgtggtggtggtggtggtg 70158
>gb|AC122302.4| Mus musculus BAC clone RP23-276E10 from chromosome 12, complete sequence Length = 172985 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 87311 gtggtgggggtggtggtggtggtg 87334
>gb|AC160517.3| Mus musculus chromosome 8, clone RP23-279A11, complete sequence Length = 169477 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 83323 ggggtggtggtggtggtgtc 83342
>gb|AC024914.48| Mus musculus BAC Clone 262c6 RPCI-23, complete sequence Length = 205922 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 168889 gtggtaggggtggtggtggtggtg 168866 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcgatgat 255 |||||||||||||||| ||||||| Sbjct: 123826 ggtggtggtggtggtgacgatgat 123849
>gb|AC119211.8| Mus musculus chromosome 7, clone RP24-191C15, complete sequence Length = 172286 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 37421 ggggtggtggtggtggtgtc 37440
>gb|AC139941.9| Mus musculus chromosome 13, clone RP23-78M22, complete sequence Length = 236536 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 153155 ggtggtggtggtggtgtcga 153136
>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence Length = 205816 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 81340 gtggtgggggtggtggtggtggtg 81363
>gb|AC124814.10| Mus musculus chromosome 1, clone RP24-119P5, complete sequence Length = 162020 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 31658 ggggtggtggtggtggtgtc 31639
>gb|AC158547.7| Mus musculus chromosome 3, clone RP23-477L20, complete sequence Length = 182793 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 126435 ggtcggggtggtggtggtgg 126416
>gb|AC158617.9| Mus musculus 10 BAC RP23-283O2 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 240410 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 53428 gtggtgggggtggtggtggtggtg 53405 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 53404 gtggtgggggtggtggtggtggtg 53381 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 53380 gtggtgggggtggtggtggtggtg 53357 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 53347 gtggtgggggtggtggtggtggtg 53324 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 53269 gtggtgggggtggtggtggtggtg 53246
>ref|XM_978764.1| PREDICTED: Mus musculus hypothetical protein LOC670051 (LOC670051), mRNA Length = 600 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 534 ggtggtggtggtggtgtcga 515
>gb|AC126270.4| Mus musculus BAC clone RP23-233A12 from chromosome 10, complete sequence Length = 208709 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 159747 gtggtgggggtggtggtggtggtg 159724
>gb|AC133498.2| Mus musculus BAC clone RP24-241K8 from chromosome 13, complete sequence Length = 159112 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 79223 gtggtgggggtggtggtggtggtg 79200
>emb|CT009661.10| Mouse DNA sequence from clone CH29-621D18 on chromosome 17, complete sequence Length = 224982 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 96787 ggggtggtggtggtggtgtc 96806
>gb|AC128700.4| Mus musculus BAC clone RP24-130A20 from chromosome 8, complete sequence Length = 161757 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 96499 gtggtcgtggtggtggtggtggtg 96476
>gb|AF532975.1| Oryza sativa (indica cultivar-group) IR24 chromosome 5 BAC, complete sequence Length = 86190 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 74602 cggggtggtggtggtggtgt 74621
>gb|AC125044.3| Mus musculus BAC clone RP23-348B10 from chromosome 17, complete sequence Length = 222615 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 166330 ggtggtggtggtggtgtcga 166311
>gb|AC123029.3| Mus musculus BAC clone RP24-571B18 from chromosome 8, complete sequence Length = 154235 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 44059 tcggggtggtggtggtggtg 44040
>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178905 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 86427 gtggtcgcggtggtggtggtggtg 86450
>gb|AC123068.4| Mus musculus BAC clone RP23-21P10 from 1, complete sequence Length = 221464 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 234 tggtggtggtggtgtcgatgatgc 257 |||||||||||||| ||||||||| Sbjct: 46085 tggtggtggtggtggcgatgatgc 46108
>gb|AC124194.3| Mus musculus BAC clone RP23-277L21 from 2, complete sequence Length = 181676 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 230 ggggtggtggtggtggtgtcgatg 253 ||||||||||||||||||| |||| Sbjct: 12687 ggggtggtggtggtggtgtggatg 12664
>gb|AY170466.1| Leishmania mexicana mexicana beta adaptin gene, complete cds Length = 4751 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 3887 ggtggtggtggtggtgtcga 3906
>gb|AC105446.4| Homo sapiens BAC clone RP11-395B7 from 7, complete sequence Length = 139517 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 76 gggtggtggtggtggtgtcg 95
>gb|AC118608.7| Mus musculus chromosome 17, clone RP23-478J10, complete sequence Length = 196566 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 148721 tcggggtggtggtggtggtg 148702
>gb|DQ157372.1| Penicillium expansum glucose oxidase mRNA, partial cds Length = 762 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtgtcga 251 ||||||||||||||||||| |||| Sbjct: 640 tcggggtggtggtggtggtatcga 617
>gb|AC165163.2| Mus musculus BAC clone RP23-146B12 from chromosome 14, complete sequence Length = 178254 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 168242 tattgtggtggtggtggtggtggtggtg 168215
>emb|AL445529.14| Human DNA sequence from clone RP11-793K1 on chromosome 6 Cpntains a ribosomal protein S15a (RPS15A) pseudogene, complete sequence Length = 76336 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 225 tggtcggggtggtggtggtggtgt 248 |||||| ||||||||||||||||| Sbjct: 2398 tggtcgtggtggtggtggtggtgt 2375
>emb|Z93017.6|HS291J10 Human DNA sequence from clone RP1-291J10 on chromosome 6p21.2-21.33 Contains the BAK1 gene for BCL2-antagonist/killer 1 and a CpG Island, complete sequence Length = 122103 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 225 tggtcggggtggtggtggtggtgt 248 |||||| ||||||||||||||||| Sbjct: 74838 tggtcgtggtggtggtggtggtgt 74861
>emb|AL591890.31| Human DNA sequence from clone RP11-54A22 on chromosome 9 Contains three novel genes, and the 5' end of the COL5A1 gene for collagen (type V) alpha 1, and a CpG island, complete sequence Length = 173415 Score = 40.1 bits (20), Expect = 7.1 Identities = 32/36 (88%) Strand = Plus / Plus Query: 221 attgtggtcggggtggtggtggtggtgtcgatgatg 256 |||||||| | |||||||||||||| | |||||||| Sbjct: 154857 attgtggtggtggtggtggtggtggaggcgatgatg 154892
>ref|XM_793346.1| PREDICTED: Strongylocentrotus purpuratus similar to Fanconi anemia, complementation group D2 (LOC593890), partial mRNA Length = 2016 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ggcagatggatggcagaagg 282 |||||||||||||||||||| Sbjct: 1155 ggcagatggatggcagaagg 1174
>emb|AL356986.11| Human DNA sequence from clone RP11-395N6 on chromosome 1 Contains the 5' end of a known gene (FLJ10276), a glyceraldehyde-3-phosphate dehydrogenase (GAPD) pseudogene, a novel pseudogene, the 5' end of the ZBTB8 gene for zinc finger and BTB domain containing 8 and five CpG islands, complete sequence Length = 98390 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 34843 tattgtggtggtggtggtggtggtggtg 34870
>emb|AL354726.17| Human DNA sequence from clone RP11-535C21 on chromosome 9 Contains 5' end of HEMGN gene for hemogen, the ANP32B gene for acidic (leucine-rich) nuclear phosphoprotein 32 family, member B and a CpG island, complete sequence Length = 82316 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 72207 tcggggtggtggtggtggtg 72226
>emb|AL160260.22| Human DNA sequence from clone RP11-519H8 on chromosome 6 Contains a CpG island, complete sequence Length = 75778 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 14235 gtggtcgtggtggtggtggtggtg 14258
>ref|XM_787168.1| PREDICTED: Strongylocentrotus purpuratus similar to CG18405-PA (LOC587441), mRNA Length = 2094 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 617 gtggtgggggtggtggtggtggtg 594
>emb|AL035662.65|HS599F21 Human DNA sequence from clone RP4-599F21 on chromosome 20q12-13.12 Contains the 5' end of the NCOA5 gene for nuclear receptor coactivator 5, the RPL13P2 gene for ribosomal protein L13 pseudogene 2, the TNFRSF5 gene for tumor necrosis factor receptor superfamily member 5 and two CpG islands, complete sequence Length = 95283 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 86821 ggggtggtggtggtggtgtc 86840
>emb|AJ969064.1| Triticum aestivum mRNA for glycosyltransferase (pglcat8 gene) Length = 1945 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 515 gtggtcgtggtggtggtggtggtg 492
>ref|XM_790950.1| PREDICTED: Strongylocentrotus purpuratus similar to Fanconi anemia, complementation group D2 (LOC591386), mRNA Length = 1710 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 263 ggcagatggatggcagaagg 282 |||||||||||||||||||| Sbjct: 930 ggcagatggatggcagaagg 949
>gb|AF500110.1| Neurospora crassa suppressor of ascus dominance (sad-1) pseudogene, sad-1-RIP64 allele, complete sequence Length = 7178 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 6504 gtggttggggtggtggtggtggtg 6527
>gb|AC096070.7| Rattus norvegicus 4 BAC CH230-20J7 (Children's Hospital Oakland Research Institute) complete sequence Length = 231332 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 17280 gtggtgggggtggtggtggtggtg 17257 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 17178 gtggtgggggtggtggtggtggtg 17155
>emb|X97629.1|AMDPNS1VP Aleutian mink disease parvovirus NS1 and VP1 genes Length = 4718 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 2488 gtggtgggggtggtggtggtggtg 2511
>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence Length = 242759 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 94740 ggggtggtggtggtggtgtc 94759
>gb|AC151830.3| Mus musculus BAC clone RP24-76I23 from chromosome 7, complete sequence Length = 212931 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 23559 gtggtcgtggtggtggtggtggtg 23536
>gb|AC153495.10| Mus musculus 10 BAC RP23-468D5 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 179258 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 32813 gtggtgggggtggtggtggtggtg 32790
>gb|AC159196.2| Mus musculus BAC clone RP23-430O17 from chromosome 13, complete sequence Length = 198595 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 155892 gtggtgggggtggtggtggtggtg 155915
>emb|AL606641.3|OSJN00074 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032F06, complete sequence Length = 148023 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 143259 cggggtggtggtggtggtgt 143278
>gb|AC164087.5| Mus musculus BAC clone RP23-408K7 from chromosome 9, complete sequence Length = 211783 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 52119 gtggtcgtggtggtggtggtggtg 52142
>emb|BX000359.7| Mouse DNA sequence from clone RP23-343C18 on chromosome 11 Contains the gene for a novel helix-loop-helix DNA-binding domain containing protein, a novel gene, the Gosr1 gene for golgi SNAP receptor complex member 1 and a CpG island, complete sequence Length = 118586 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 108786 ggggtggtggtggtggtgtc 108805
>emb|AL672175.7| Mouse DNA sequence from clone RP23-205A9 on chromosome 11 Contains the Nog gene for noggin, the 3' end of the gene for a novel protein (4932411E22Rik) and one CpG island, complete sequence Length = 212341 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 180865 ggtcggggtggtggtggtgg 180884
>emb|AL663083.5| Mouse DNA sequence from clone RP23-280G3 on chromosome 11 Contains the 3' end of the gene for a novel protein and the 3' end of a novel gene, complete sequence Length = 191191 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 64638 tcggggtggtggtggtggtg 64619
>emb|AL589744.18| Mouse DNA sequence from clone RP23-80C18 on chromosome 13 Contains a nove gene, a ribosomal protein large p1 (Rplp1) pseudogene and the Cmah gene for CMP-N-Acetylneuraminic acid hydroxylase, complete sequence Length = 216800 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 234 tggtggtggtggtgtcgatg 253 |||||||||||||||||||| Sbjct: 202906 tggtggtggtggtgtcgatg 202887
>emb|AL606511.8| Mouse DNA sequence from clone RP23-262C6 on chromosome 13 Contains the Sox4 gene for SRY-box containing protein 4, a novel gene and two CpG islands, complete sequence Length = 154685 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcgatgat 255 |||||||||||||||| ||||||| Sbjct: 30734 ggtggtggtggtggtgacgatgat 30711
>emb|AL606528.7| Mouse DNA sequence from clone RP23-45H23 on chromosome 13 Contains a ribosomal protein 7A (Rpl7a) pseudogene and a novel gene (2610307P16Rik), complete sequence Length = 148066 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 131737 gtggtaggggtggtggtggtggtg 131760
>emb|AL671118.30| Mouse DNA sequence from clone RP23-256J17 on chromosome X, complete sequence Length = 234055 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 221 attgtggtcggggtggtggtggtggtgt 248 |||||||| | ||||||||||||||||| Sbjct: 35000 attgtggtagtggtggtggtggtggtgt 34973
>gb|AC155256.2| Mus musculus BAC clone RP24-142I9 from chromosome 12, complete sequence Length = 163949 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 18046 gtggtcgtggtggtggtggtggtg 18069
>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence Length = 223640 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 43456 ggggtggtggtggtggtgtc 43437
>dbj|AP003707.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OJ1485_B09 Length = 66599 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 37911 gtggtcgtggtggtggtggtggtg 37888
>dbj|AB038781.1| Homo sapiens MUC3B gene for intestinal mucin, partial cds Length = 9131 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 3629 gggtggtggtggtggtgtcg 3648
>gb|AC093498.3| Drosophila melanogaster 3L BAC RP98-15O8 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 160931 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 96844 ggtcggggtggtggtggtgg 96825
>emb|BX324156.6| Zebrafish DNA sequence from clone CH211-215C3 in linkage group 1, complete sequence Length = 214471 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 139 gattttattttcaatcacaacaca 162 ||||||||||||||||| |||||| Sbjct: 200929 gattttattttcaatcagaacaca 200952
>gb|AC091776.19| Chlamydomonas reinhardtii clone cr-4i21, complete sequence Length = 48498 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 16128 gtggtgggggtggtggtggtggtg 16151
>gb|AC087726.36| Chlamydomonas reinhardtii clone cr-40a20, complete sequence Length = 168794 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 163642 gtggtgggggtggtggtggtggtg 163665
>tpg|BK003911.1| TPA: TPA_inf: Drosophila melanogaster HDC07172 (HDC07172) gene, complete cds Length = 1164 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 990 tcggggtggtggtggtggtg 1009
>gb|AC096507.7| Homo sapiens Xp BAC RP11-81E7 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 102500 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 222 ttgtggtcggggtggtggtggtggtgtc 249 ||||||| | |||||||||||||||||| Sbjct: 89837 ttgtggtggcggtggtggtggtggtgtc 89810
>ref|NM_168540.1| Drosophila melanogaster capricious CG11282-RB, transcript variant B (caps), mRNA Length = 2749 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 2331 ggtcggggtggtggtggtgg 2350
>gb|AC162465.3| Mus musculus 6 BAC RP24-108G5 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 203546 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 221 attgtggtcggggtggtggtggtggtgt 248 |||||||| | ||||||||||||||||| Sbjct: 176997 attgtggtggtggtggtggtggtggtgt 177024
>ref|NM_079332.2| Drosophila melanogaster capricious CG11282-RA, transcript variant A (caps), mRNA Length = 2962 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 226 ggtcggggtggtggtggtgg 245 |||||||||||||||||||| Sbjct: 2544 ggtcggggtggtggtggtgg 2563
>dbj|AK134074.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched library, clone:5830430D20 product:unclassifiable, full insert sequence Length = 2214 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 577 tcggggtggtggtggtggtg 558
>gb|AC106755.2| Homo sapiens chromosome 5 clone RP11-188E14, complete sequence Length = 86871 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 64944 gtggtgggggtggtggtggtggtg 64921
>gb|AF312225.1|AF312225 Homo sapiens chromosome 2 map 2q37.1, complete sequence Length = 345102 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 61524 ggggtggtggtggtggtgtc 61543
>gb|AC019130.6| Homo sapiens BAC clone RP11-563E16 from 2, complete sequence Length = 139049 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 64637 ggggtggtggtggtggtgtc 64656
>gb|AC016764.8| Homo sapiens BAC clone RP11-549G13 from 2, complete sequence Length = 155868 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 219 ttattgtggtcggggtggtggtggtggt 246 |||||||||| | ||||||||||||||| Sbjct: 113290 ttattgtggtggcggtggtggtggtggt 113317
>gb|AY029284.2| Neurospora crassa suppressor of ascus dominance (sad-1) gene, complete cds Length = 6847 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 6173 gtggttggggtggtggtggtggtg 6196
>gb|AF205597.1|AF205597 Drosophila melanogaster clone DS05441 Fragile X related gene, complete cds Length = 9626 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 233 gtggtggtggtggtgtcgatgatg 256 ||||||||||||||| |||||||| Sbjct: 3591 gtggtggtggtggtggcgatgatg 3568
>gb|AF329945.1|AF329945 Takifugu rubripes SUN-like 1 (SUNL1), chromosome 17 open reading frame 27 (C17orf27), transcription factor SOX9 (SOX9), and somatostatin receptor 2 (SSTR2) genes, complete cds; and ubiquitin-specific-protease-3-like protein (USP3L) gene, partial cds Length = 194498 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 170864 tcggggtggtggtggtggtg 170845
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 198 gccaggaaggagatcgccgg 217 |||||||||||||||||||| Sbjct: 2313957 gccaggaaggagatcgccgg 2313938
>gb|AC117588.11| Mus musculus chromosome 15, clone RP23-177B8, complete sequence Length = 211177 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 178330 gtggtcgtggtggtggtggtggtg 178307
>gb|AC152718.6| Mus musculus BAC clone RP24-432B3 from chromosome 9, complete sequence Length = 174264 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 27039 gtggtgggggtggtggtggtggtg 27016
>gb|AC158628.7| Mus musculus 6 BAC RP23-147K11 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188746 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 139774 tattgtggtggtggtggtggtggtggtg 139747
>gb|AC160062.6| Mus musculus 6 BAC RP23-427I18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 169540 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 146661 gtggtgggggtggtggtggtggtg 146638
>gb|AY275681.1| Homo sapiens mutS homolog 3 (E. coli) (MSH3) gene, complete cds Length = 223885 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 123827 tattgtggttgtggtggtggtggtggtg 123800
>gb|AC132949.4| Mus musculus BAC clone RP24-547H18 from chromosome 7, complete sequence Length = 206116 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 124838 gtggtgggggtggtggtggtggtg 124861
>gb|AC079022.2|AC079022 Oryza sativa chromosome 5 clone P0574H01, complete sequence Length = 151589 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 13250 cggggtggtggtggtggtgt 13269
>gb|AC068472.5|AC068472 Homo sapiens chromosome 11, clone RP11-713P14, complete sequence Length = 183659 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 gcttcctttggaggagagcc 335 |||||||||||||||||||| Sbjct: 119462 gcttcctttggaggagagcc 119481
>gb|AC153895.5| Mus musculus 6 BAC RP23-114F22 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 187298 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 172027 tcggggtggtggtggtggtg 172008
>dbj|AK041068.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530078N24 product:unclassifiable, full insert sequence Length = 1860 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 1462 tcggggtggtggtggtggtg 1443
>gb|AC158599.7| Mus musculus 10 BAC RP23-122O12 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 191825 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 118056 gtggtcgtggtggtggtggtggtg 118079
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 34937146 cggggtggtggtggtggtgt 34937165
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 232 ggtggtggtggtggtgtcga 251 |||||||||||||||||||| Sbjct: 22286891 ggtggtggtggtggtgtcga 22286872 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 18349845 tcggggtggtggtggtggtg 18349826
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 227 gtcggggtggtggtggtggt 246 |||||||||||||||||||| Sbjct: 21883141 gtcggggtggtggtggtggt 21883122
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 21882541 tcggggtggtggtggtggtg 21882560 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 cggggtggtggtggtggtgt 248 |||||||||||||||||||| Sbjct: 413452 cggggtggtggtggtggtgt 413471
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 40238959 gtggtcgtggtggtggtggtggtg 40238936 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 34350226 gggtggtggtggtggtgtcg 34350245
>gb|AC009850.10|AC009850 Drosophila melanogaster, chromosome 2R, region 55E-55F, BAC clone BACR27L09, complete sequence Length = 173059 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 126041 tcggggtggtggtggtggtg 126060
>gb|AC009183.5|AC009183 Drosophila melanogaster, chromosome 3R, region 85F-85F, BAC clone BACR39F04, complete sequence Length = 192055 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 233 gtggtggtggtggtgtcgatgatg 256 ||||||||||||||| |||||||| Sbjct: 129935 gtggtggtggtggtggcgatgatg 129958
>gb|AC155649.4| Mus musculus 6 BAC RP24-234M19 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152831 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 31703 gtggtgggggtggtggtggtggtg 31680
>gb|AC154187.2| Mus musculus BAC clone RP24-444N2 from chromosome 17, complete sequence Length = 224908 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 63452 ggggtggtggtggtggtgtc 63471
>gb|AC149055.6| Mus musculus BAC clone RP23-358K1 from chromosome 7, complete sequence Length = 215193 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 230 ggggtggtggtggtggtgtc 249 |||||||||||||||||||| Sbjct: 26584 ggggtggtggtggtggtgtc 26565
>dbj|AP006843.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1793G04 Length = 156714 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 104737 gtggtcgtggtggtggtggtggtg 104714
>ref|XM_580257.1| PREDICTED: Rattus norvegicus LOC502915 (LOC502915), mRNA Length = 447 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 371 gtggtcgtggtggtggtggtggtg 348
>gb|AC158665.3| Mus musculus 6 BAC RP23-102M16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 207904 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 36207 tattgtggtggtggtggtggtggtggtg 36180
>gb|AC022493.12|AC022493 Homo sapiens 5 BAC RP11-241J12 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 153078 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Plus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 106741 tattgtggttgtggtggtggtggtggtg 106768
>dbj|AP003260.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0468B07 Length = 169071 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 231 gggtggtggtggtggtgtcg 250 |||||||||||||||||||| Sbjct: 32570 gggtggtggtggtggtgtcg 32589
>gb|AF495532.1| Mus musculus molecular chaperone P58IPK (Dnajc3) gene, promoter region and 5' untranslated region Length = 1769 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 228 tcggggtggtggtggtggtg 247 |||||||||||||||||||| Sbjct: 876 tcggggtggtggtggtggtg 895
>gb|AC154283.1| Mus musculus BAC clone RP24-279H4 from chromosome 14, complete sequence Length = 192706 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 220 tattgtggtcggggtggtggtggtggtg 247 ||||||||| | |||||||||||||||| Sbjct: 46976 tattgtggtggtggtggtggtggtggtg 46949
>gb|AC104020.10| Homo sapiens chromosome 15, clone RP11-369K8, complete sequence Length = 171307 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 125331 gtggtcgtggtggtggtggtggtg 125308
>dbj|AP003622.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0633E08 Length = 136471 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||| |||||||||||||||||| Sbjct: 73283 gtggtgggggtggtggtggtggtg 73306
>dbj|AP006165.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1425D05, complete sequence Length = 66450 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 224 gtggtcggggtggtggtggtggtg 247 ||||||| |||||||||||||||| Sbjct: 30309 gtggtcgtggtggtggtggtggtg 30286 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,938,348 Number of Sequences: 3902068 Number of extensions: 4938348 Number of successful extensions: 275054 Number of sequences better than 10.0: 305 Number of HSP's better than 10.0 without gapping: 311 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 270163 Number of HSP's gapped (non-prelim): 4712 length of query: 524 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 501 effective length of database: 17,143,297,704 effective search space: 8588792149704 effective search space used: 8588792149704 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)