ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11n16
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 103 8e-19
2gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome... 103 8e-19
3dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 103 8e-19
4gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, comple... 46 0.15
5emb|BX062403.1|CNS09KBB Single read from an extremity of a full-... 44 0.60
6gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Can... 44 0.60
7emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 44 0.60
8emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4,... 42 2.4
9dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.4
10emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chro... 42 2.4
11emb|AL928961.7| Mouse DNA sequence from clone RP23-426L24 on chr... 42 2.4
12gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complet... 40 9.4
13gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence 40 9.4
14gb|AC091330.18| Trypanosoma brucei chromosome 3 clone RPCI93-48O... 40 9.4
15gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C... 40 9.4
16gb|AC150530.4| Bos taurus BAC CH240-86O22 (Children's Hospital ... 40 9.4
17gb|CP000114.1| Streptococcus agalactiae A909, complete genome 40 9.4
18gb|AC006039.3| Homo sapiens BAC clone RP11-319F3 from 7, complet... 40 9.4
19gb|BT011186.1| Drosophila melanogaster RE12154 full insert cDNA 40 9.4
20ref|XM_821517.1| Trypanosoma brucei TREU927 clone RPCI93-48O8 hy... 40 9.4
21gb|AC146236.3| Pan troglodytes BAC clone RP43-27L10 from 7, comp... 40 9.4
22gb|AC125108.3| Mus musculus BAC clone RP24-226A8 from chromosome... 40 9.4
23emb|Z66521.1|CEW02B12 Caenorhabditis elegans Cosmid W02B12, comp... 40 9.4
24gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complet... 40 9.4
25ref|XM_758912.1| Theileria parva strain Muguga chromosome 4 hypo... 40 9.4
26emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chr... 40 9.4
27emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chr... 40 9.4
28emb|AL022717.2|HS201D7 Human DNA sequence from clone RP1-201D7 o... 40 9.4
29gb|AE014239.1| Streptococcus agalactiae 2603V/R section 49 of 10... 40 9.4
30emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complet... 40 9.4
31gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map... 40 9.4
32ref|NM_136263.1| Drosophila melanogaster CG8665-RA (CG8665), mRNA 40 9.4
33gb|AC025188.8| Homo sapiens chromosome 5 clone CTD-2384B11, comp... 40 9.4
34gb|AC090814.2| Homo sapiens chromosome 8, clone RP11-1152K2, com... 40 9.4
35gb|AC124172.4| Mus musculus BAC clone RP23-168P24 from chromosom... 40 9.4
36emb|BX276082.6| Zebrafish DNA sequence from clone DKEY-259B21 in... 40 9.4
37gb|AC103725.5| Homo sapiens chromosome 8, clone RP11-598A18, com... 40 9.4
38gb|AC125499.3| Equus caballus clone CH241-369C8, complete sequence 40 9.4
39gb|AF167161.1|AF167161 Staphylococcus aureus plasmid pSR1, parti... 40 9.4
40gb|AC147267.6| Mus musculus BAC clone RP24-263E13 from chromosom... 40 9.4
41gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79... 40 9.4
42dbj|AP005857.3| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 9.4
43dbj|AP005790.2| Homo sapiens genomic DNA, chromosome 8q24, clone... 40 9.4
44gb|DP000020.1| Equus caballus target 1 genomic scaffold 40 9.4 
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  103 bits (52), Expect = 8e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                            
Query: 345      cctggcgaatcgcattggccctctcgagaatggccgccacttgtaagtttgttcttggac 404
                |||||||||| ||||| |||||||| || |||||| ||||||| ||||| ||||||||| 
Sbjct: 10443302 cctggcgaatagcattagccctctccaggatggccaccacttgcaagttcgttcttggag 10443361

                                                                
Query: 405      cacccatcacatttggtctctttgcaacaaccggtttcaagttgaaag 452
                |||||||||  || ||||||||||||| ||| || |||||||||||||
Sbjct: 10443362 cacccatcatgttcggtctctttgcaagaactggcttcaagttgaaag 10443409



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/61 (90%), Gaps = 2/61 (3%)
 Strand = Plus / Plus

                                                                            
Query: 290      tgctctgaggaa--agctactcactccagctatcctcgtcatcgtcatctgcaaccgcct 347
                ||||||||||||  ||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 10443136 tgctctgaggaatcagctagtcactccagctatcctcatcatcgtcatcagcaacagcct 10443195

                 
Query: 348      g 348
                |
Sbjct: 10443196 g 10443196



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 458      ttctttatctcatccagcactgtgttcttctcatctgaaagcttacttgatggctgaacc 517
                ||||||||||  ||||| | |||||| ||||| |||||||||||  | || |||||||||
Sbjct: 10443497 ttctttatctgttccagtattgtgttgttctcgtctgaaagcttgatagaaggctgaacc 10443556

                                     
Query: 518      aaagttggagcctttcttagc 538
                |||||||||||| || |||||
Sbjct: 10443557 aaagttggagccctttttagc 10443577



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 538      catgcttctatcatgagaaataacttgaaggagaggatatttaggtggttctggcact 595
                ||||||||||||||||| | ||||||| |  ||||||||||||||||||  |||||||
Sbjct: 10443664 catgcttctatcatgagcagtaacttggaatagaggatatttaggtggtgttggcact 10443721
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>gb|AC137931.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBa0039F10, complete sequence
          Length = 139714

 Score =  103 bits (52), Expect = 8e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                         
Query: 345   cctggcgaatcgcattggccctctcgagaatggccgccacttgtaagtttgttcttggac 404
             |||||||||| ||||| |||||||| || |||||| ||||||| ||||| ||||||||| 
Sbjct: 99855 cctggcgaatagcattagccctctccaggatggccaccacttgcaagttcgttcttggag 99914

                                                             
Query: 405   cacccatcacatttggtctctttgcaacaaccggtttcaagttgaaag 452
             |||||||||  || ||||||||||||| ||| || |||||||||||||
Sbjct: 99915 cacccatcatgttcggtctctttgcaagaactggcttcaagttgaaag 99962



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/61 (90%), Gaps = 2/61 (3%)
 Strand = Plus / Plus

                                                                         
Query: 290   tgctctgaggaa--agctactcactccagctatcctcgtcatcgtcatctgcaaccgcct 347
             ||||||||||||  ||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 99689 tgctctgaggaatcagctagtcactccagctatcctcatcatcgtcatcagcaacagcct 99748

              
Query: 348   g 348
             |
Sbjct: 99749 g 99749



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                          
Query: 458    ttctttatctcatccagcactgtgttcttctcatctgaaagcttacttgatggctgaacc 517
              ||||||||||  ||||| | |||||| ||||| |||||||||||  | || |||||||||
Sbjct: 100050 ttctttatctgttccagtattgtgttgttctcgtctgaaagcttgatagaaggctgaacc 100109

                                   
Query: 518    aaagttggagcctttcttagc 538
              |||||||||||| || |||||
Sbjct: 100110 aaagttggagccctttttagc 100130



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                        
Query: 538    catgcttctatcatgagaaataacttgaaggagaggatatttaggtggttctggcact 595
              ||||||||||||||||| | ||||||| |  ||||||||||||||||||  |||||||
Sbjct: 100217 catgcttctatcatgagcagtaacttggaatagaggatatttaggtggtgttggcact 100274
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  103 bits (52), Expect = 8e-19
 Identities = 94/108 (87%)
 Strand = Plus / Plus

                                                                            
Query: 345      cctggcgaatcgcattggccctctcgagaatggccgccacttgtaagtttgttcttggac 404
                |||||||||| ||||| |||||||| || |||||| ||||||| ||||| ||||||||| 
Sbjct: 10441403 cctggcgaatagcattagccctctccaggatggccaccacttgcaagttcgttcttggag 10441462

                                                                
Query: 405      cacccatcacatttggtctctttgcaacaaccggtttcaagttgaaag 452
                |||||||||  || ||||||||||||| ||| || |||||||||||||
Sbjct: 10441463 cacccatcatgttcggtctctttgcaagaactggcttcaagttgaaag 10441510



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/61 (90%), Gaps = 2/61 (3%)
 Strand = Plus / Plus

                                                                            
Query: 290      tgctctgaggaa--agctactcactccagctatcctcgtcatcgtcatctgcaaccgcct 347
                ||||||||||||  ||||| ||||||||||||||||| ||||||||||| ||||| ||||
Sbjct: 10441237 tgctctgaggaatcagctagtcactccagctatcctcatcatcgtcatcagcaacagcct 10441296

                 
Query: 348      g 348
                |
Sbjct: 10441297 g 10441297



 Score = 65.9 bits (33), Expect = 2e-07
 Identities = 69/81 (85%)
 Strand = Plus / Plus

                                                                            
Query: 458      ttctttatctcatccagcactgtgttcttctcatctgaaagcttacttgatggctgaacc 517
                ||||||||||  ||||| | |||||| ||||| |||||||||||  | || |||||||||
Sbjct: 10441598 ttctttatctgttccagtattgtgttgttctcgtctgaaagcttgatagaaggctgaacc 10441657

                                     
Query: 518      aaagttggagcctttcttagc 538
                |||||||||||| || |||||
Sbjct: 10441658 aaagttggagccctttttagc 10441678



 Score = 60.0 bits (30), Expect = 1e-05
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                          
Query: 538      catgcttctatcatgagaaataacttgaaggagaggatatttaggtggttctggcact 595
                ||||||||||||||||| | ||||||| |  ||||||||||||||||||  |||||||
Sbjct: 10441765 catgcttctatcatgagcagtaacttggaatagaggatatttaggtggtgttggcact 10441822
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>gb|AC093798.3| Homo sapiens BAC clone RP11-306N14 from 2, complete sequence
          Length = 233877

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 94     cacatcaaaagataataaacata 116
              |||||||||||||||||||||||
Sbjct: 123276 cacatcaaaagataataaacata 123298
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>emb|BX062403.1|CNS09KBB Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC43CG04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1016

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 319 atcctcgtcatcgtcatctgca 340
           ||||||||||||||||||||||
Sbjct: 199 atcctcgtcatcgtcatctgca 178
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>gb|AC092936.9| Homo sapiens 12 BAC RP11-286J13 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 217112

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 185   tgaagaaaaagttgcatttgactact 210
             ||||||||||||||||||||| ||||
Sbjct: 49801 tgaagaaaaagttgcatttgattact 49776
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 44.1 bits (22), Expect = 0.60
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 529     ctttcttagcatgcttctatca 550
               ||||||||||||||||||||||
Sbjct: 1796257 ctttcttagcatgcttctatca 1796236
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>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02,
              complete sequence
          Length = 172435

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 97     atcaaaagataataaacatat 117
              |||||||||||||||||||||
Sbjct: 158507 atcaaaagataataaacatat 158487
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                     
Query: 97       atcaaaagataataaacatat 117
                |||||||||||||||||||||
Sbjct: 16629273 atcaaaagataataaacatat 16629253
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>emb|AL732543.8| Mouse DNA sequence from clone RP23-13D22 on chromosome 4, complete
             sequence
          Length = 195272

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 2     cttttgcttctttctatatac 22
             |||||||||||||||||||||
Sbjct: 25940 cttttgcttctttctatatac 25920
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>emb|AL928961.7| Mouse DNA sequence from clone RP23-426L24 on chromosome X, complete
            sequence
          Length = 33106

 Score = 42.1 bits (21), Expect = 2.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 212  atatgttctaccattttcttc 232
            |||||||||||||||||||||
Sbjct: 6788 atatgttctaccattttcttc 6768
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>gb|AC007208.13| Drosophila melanogaster clone BACR05D08, complete sequence
          Length = 172190

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   aacatcagcagccaaattgctctg 296
             |||||||||||| |||||||||||
Sbjct: 60788 aacatcagcagcaaaattgctctg 60765
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>gb|CP000066.1| Trypanosoma brucei chromosome 3, complete sequence
          Length = 1653225

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    atcctcgtcatcgtcatctg 338
              ||||||||||||||||||||
Sbjct: 696302 atcctcgtcatcgtcatctg 696321
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>gb|AC091330.18| Trypanosoma brucei chromosome 3 clone RPCI93-48O8, complete sequence
          Length = 138368

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  atcctcgtcatcgtcatctg 338
            ||||||||||||||||||||
Sbjct: 6856 atcctcgtcatcgtcatctg 6837
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>gb|AC104642.11| Trypanosoma brucei chromosome 3 clone RPCI93-27C5, complete sequence
          Length = 126762

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 319  atcctcgtcatcgtcatctg 338
            ||||||||||||||||||||
Sbjct: 5250 atcctcgtcatcgtcatctg 5269
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>gb|AC150530.4| Bos taurus  BAC CH240-86O22 (Children's Hospital Oakland Research
              Institute Bovine BAC Library (male)) complete sequence
          Length = 190177

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     caaaagataataaacatatg 118
              ||||||||||||||||||||
Sbjct: 151711 caaaagataataaacatatg 151692
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>gb|CP000114.1| Streptococcus agalactiae A909, complete genome
          Length = 2127839

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 439     tttcaagttgaaagtcttgttctt 462
               |||||| |||||||||||||||||
Sbjct: 1099051 tttcaaattgaaagtcttgttctt 1099074
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>gb|AC006039.3| Homo sapiens BAC clone RP11-319F3 from 7, complete sequence
          Length = 176257

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    atgaagaaaaagttgcattt 203
              ||||||||||||||||||||
Sbjct: 125573 atgaagaaaaagttgcattt 125592
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>gb|BT011186.1| Drosophila melanogaster RE12154 full insert cDNA
          Length = 3636

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 273 aacatcagcagccaaattgctctg 296
           |||||||||||| |||||||||||
Sbjct: 176 aacatcagcagcaaaattgctctg 153
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>ref|XM_821517.1| Trypanosoma brucei TREU927 clone RPCI93-48O8 hypothetical protein
            (Tb927.3.2730) partial mRNA
          Length = 5085

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 319  atcctcgtcatcgtcatctg 338
            ||||||||||||||||||||
Sbjct: 4506 atcctcgtcatcgtcatctg 4487
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>gb|AC146236.3| Pan troglodytes BAC clone RP43-27L10 from 7, complete sequence
          Length = 184346

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 184    atgaagaaaaagttgcattt 203
              ||||||||||||||||||||
Sbjct: 107202 atgaagaaaaagttgcattt 107221
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>gb|AC125108.3| Mus musculus BAC clone RP24-226A8 from chromosome 10, complete sequence
          Length = 148202

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 160   ctgtcttggcatggtgttct 179
             ||||||||||||||||||||
Sbjct: 63474 ctgtcttggcatggtgttct 63455
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>emb|Z66521.1|CEW02B12 Caenorhabditis elegans Cosmid W02B12, complete sequence
          Length = 34305

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  atgccctgaaaacgtcaaaa 140
            ||||||||||||||||||||
Sbjct: 2865 atgccctgaaaacgtcaaaa 2884
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>gb|AC116950.5| Mus musculus BAC clone RP23-56K4 from 15, complete sequence
          Length = 225940

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 522    ttggagcctttcttagcatgcttc 545
              ||||||||||||||||||| ||||
Sbjct: 172938 ttggagcctttcttagcatccttc 172915
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>ref|XM_758912.1| Theileria parva strain Muguga chromosome 4 hypothetical protein
            (TP04_0370) partial mRNA
          Length = 5181

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 458  ttctttatctcatccagcac 477
            ||||||||||||||||||||
Sbjct: 1154 ttctttatctcatccagcac 1135
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>emb|AL357274.9| Human DNA sequence from clone RP11-685P13 on chromosome 6, complete
              sequence
          Length = 133565

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 4      tttgcttctttctatataca 23
              ||||||||||||||||||||
Sbjct: 121774 tttgcttctttctatataca 121793
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>emb|AL137139.9| Human DNA sequence from clone RP11-134O15 on chromosome 13 Contains the
             3' end of the CLYBL gene for citrate lyase beta like (CLB
             bA134O15.1) and a CpG island, complete sequence
          Length = 174128

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 652   catgtcattggaactatcttcctg 675
             ||||||| ||||||||||||||||
Sbjct: 29785 catgtcagtggaactatcttcctg 29762
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>emb|AL022717.2|HS201D7 Human DNA sequence from clone RP1-201D7 on chromosome 6p22.1-22.3
             Contains part of a novel gene (FLJ20342), complete
             sequence
          Length = 100733

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 181   gagatgaagaaaaagttgcatttg 204
             ||||||||||||||||| ||||||
Sbjct: 90092 gagatgaagaaaaagttccatttg 90115
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>gb|AE014239.1| Streptococcus agalactiae 2603V/R section 49 of 100 of the complete
            genome
          Length = 22361

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 439  tttcaagttgaaagtcttgttctt 462
            |||||| |||||||||||||||||
Sbjct: 8702 tttcaaattgaaagtcttgttctt 8725
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>emb|AL766848.1|SAG766848 Streptococcus agalactiae NEM316 complete genome, segment 6
          Length = 233050

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 439    tttcaagttgaaagtcttgttctt 462
              |||||| |||||||||||||||||
Sbjct: 161626 tttcaaattgaaagtcttgttctt 161649
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>gb|AC007069.6| Arabidopsis thaliana chromosome 2 clone T23K3 map mi320, complete
             sequence
          Length = 73009

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 547   atcatgagaaataacttgaa 566
             ||||||||||||||||||||
Sbjct: 23133 atcatgagaaataacttgaa 23152
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>ref|NM_136263.1| Drosophila melanogaster CG8665-RA (CG8665), mRNA
          Length = 3619

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 273 aacatcagcagccaaattgctctg 296
           |||||||||||| |||||||||||
Sbjct: 176 aacatcagcagcaaaattgctctg 153
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>gb|AC025188.8| Homo sapiens chromosome 5 clone CTD-2384B11, complete sequence
          Length = 143335

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   agataataaacatatggcat 122
             ||||||||||||||||||||
Sbjct: 35106 agataataaacatatggcat 35087
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>gb|AC090814.2| Homo sapiens chromosome 8, clone RP11-1152K2, complete sequence
          Length = 142938

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 293   tctgaggaaagctactcact 312
             ||||||||||||||||||||
Sbjct: 95843 tctgaggaaagctactcact 95824
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>gb|AC124172.4| Mus musculus BAC clone RP23-168P24 from chromosome 1, complete sequence
          Length = 192946

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 560    acttgaaggagaggatattt 579
              ||||||||||||||||||||
Sbjct: 125257 acttgaaggagaggatattt 125276
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>emb|BX276082.6| Zebrafish DNA sequence from clone DKEY-259B21 in linkage group 3,
             complete sequence
          Length = 75111

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   atcctcgtcatcgtcatctg 338
             ||||||||||||||||||||
Sbjct: 34798 atcctcgtcatcgtcatctg 34817
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>gb|AC103725.5| Homo sapiens chromosome 8, clone RP11-598A18, complete sequence
          Length = 172945

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cacatcaaaagataataaac 113
             ||||||||||||||||||||
Sbjct: 57710 cacatcaaaagataataaac 57691
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>gb|AC125499.3| Equus caballus clone CH241-369C8, complete sequence
          Length = 207304

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    gatatgttctaccattttcttcat 234
              ||||||| ||||||||||||||||
Sbjct: 104237 gatatgtgctaccattttcttcat 104260
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>gb|AF167161.1|AF167161 Staphylococcus aureus plasmid pSR1, partial sequence
          Length = 11372

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 182 agatgaagaaaaagttgcat 201
           ||||||||||||||||||||
Sbjct: 816 agatgaagaaaaagttgcat 797
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>gb|AC147267.6| Mus musculus BAC clone RP24-263E13 from chromosome 3, complete
            sequence
          Length = 155979

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 121  atgccctgaaaacgtcaaaa 140
            ||||||||||||||||||||
Sbjct: 8293 atgccctgaaaacgtcaaaa 8312
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>gb|AE003670.5| Drosophila melanogaster chromosome 2L, section 79 of 83 of the complete
             sequence
          Length = 258711

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 273   aacatcagcagccaaattgctctg 296
             |||||||||||| |||||||||||
Sbjct: 89863 aacatcagcagcaaaattgctctg 89840
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>dbj|AP005857.3| Homo sapiens genomic DNA, chromosome 8q24, clone: KB1585F1, complete
             sequence
          Length = 158971

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cacatcaaaagataataaac 113
             ||||||||||||||||||||
Sbjct: 75053 cacatcaaaagataataaac 75034
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>dbj|AP005790.2| Homo sapiens genomic DNA, chromosome 8q24, clone: KB232A8, complete
             sequence
          Length = 122921

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 94    cacatcaaaagataataaac 113
             ||||||||||||||||||||
Sbjct: 30368 cacatcaaaagataataaac 30349
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>gb|DP000020.1| Equus caballus target 1 genomic scaffold
          Length = 1907055

 Score = 40.1 bits (20), Expect = 9.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 211    gatatgttctaccattttcttcat 234
              ||||||| ||||||||||||||||
Sbjct: 394720 gatatgtgctaccattttcttcat 394743


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,745,727
Number of Sequences: 3902068
Number of extensions: 6745727
Number of successful extensions: 133446
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 133122
Number of HSP's gapped (non-prelim): 324
length of query: 687
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 664
effective length of database: 17,143,297,704
effective search space: 11383149675456
effective search space used: 11383149675456
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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