Clone Name | rbasd11n15 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | PYRF_THET2 (P96076) Orotidine 5'-phosphate decarboxylase (EC 4.1... | 31 | 2.4 | 2 | DHMA2_MYCTU (P64303) Haloalkane dehalogenase 2 (EC 3.8.1.5) | 30 | 4.1 | 3 | DHMA2_MYCBO (P64304) Haloalkane dehalogenase 2 (EC 3.8.1.5) | 30 | 4.1 | 4 | MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-pro... | 30 | 5.4 | 5 | AGO2_DROME (Q9VUQ5) Argonaute 2 protein | 30 | 5.4 |
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>PYRF_THET2 (P96076) Orotidine 5'-phosphate decarboxylase (EC 4.1.1.23) (OMP| decarboxylase) (OMPDCase) (OMPdecase) Length = 257 Score = 30.8 bits (68), Expect = 2.4 Identities = 21/56 (37%), Positives = 26/56 (46%) Frame = -3 Query: 354 GVVEGYRAEVPGLAPRCRTTGHHEPHQPPELHRQGPQPLRPKTLRFAVVRKLYPDG 187 G+V G A P R R H P P + QG +PL+ + L FA R LY G Sbjct: 183 GMVVG--ATYPEAVARVRERAPHAPLLLPGVGAQGGRPLKGEGLLFAASRALYYPG 236
>DHMA2_MYCTU (P64303) Haloalkane dehalogenase 2 (EC 3.8.1.5)| Length = 286 Score = 30.0 bits (66), Expect = 4.1 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 13/85 (15%) Frame = -1 Query: 449 LVGSCVISYACDYIVSQKKIFGGTIP------------GTVSDKEW-WKATEQRFQAWPR 309 ++G V D +S + +GG I G V W W A +A+ R Sbjct: 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSR 149 Query: 308 VAGPPVIMNPISRQNFIVKDLNP*G 234 V P + I R+NF V+ L P G Sbjct: 150 VMSSPPVQYAILRRNFFVERLIPAG 174
>DHMA2_MYCBO (P64304) Haloalkane dehalogenase 2 (EC 3.8.1.5)| Length = 286 Score = 30.0 bits (66), Expect = 4.1 Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 13/85 (15%) Frame = -1 Query: 449 LVGSCVISYACDYIVSQKKIFGGTIP------------GTVSDKEW-WKATEQRFQAWPR 309 ++G V D +S + +GG I G V W W A +A+ R Sbjct: 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSR 149 Query: 308 VAGPPVIMNPISRQNFIVKDLNP*G 234 V P + I R+NF V+ L P G Sbjct: 150 VMSSPPVQYAILRRNFFVERLIPAG 174
>MAST2_MOUSE (Q60592) Microtubule-associated serine/threonine-protein kinase 2 (EC| 2.7.11.1) Length = 1734 Score = 29.6 bits (65), Expect = 5.4 Identities = 25/70 (35%), Positives = 31/70 (44%), Gaps = 13/70 (18%) Frame = -3 Query: 402 SEEDLWWHHPRDRLG---QGVVEGY-----RAEVPGLAPR--CRTTGHHE---PHQPPEL 262 +EED + H + G G+V G R +VPGL+PR R E P Q P L Sbjct: 1480 TEEDTFLHRDLKKQGPVLSGLVTGATLGSPRVDVPGLSPRKVSRPQAFEEATNPLQVPSL 1539 Query: 261 HRQGPQPLRP 232 R GP P Sbjct: 1540 SRSGPTSPTP 1549
>AGO2_DROME (Q9VUQ5) Argonaute 2 protein| Length = 1214 Score = 29.6 bits (65), Expect = 5.4 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = -3 Query: 357 QGVVEGYRAEVPGLAP-RCRTTGHHEPHQPPELHRQGPQPLRPK 229 QG GY+ PG P + ++ G ++ PP+ + P PL P+ Sbjct: 357 QGQEGGYQQRPPGQQPNQTQSQGQYQSRGPPQQQQAAPLPLPPQ 400 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,714,135 Number of Sequences: 219361 Number of extensions: 1474082 Number of successful extensions: 4030 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 3878 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4029 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4085413911 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)