Clone Name | rbasd11n10 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interacto... | 32 | 1.6 | 2 | ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... | 26 | 2.1 | 3 | CRLS1_RAT (Q5U2V5) Cardiolipin synthetase (EC 2.7.8.-) (Cardioli... | 29 | 7.8 |
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>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)| (Ik3-1) Length = 568 Score = 31.6 bits (70), Expect = 1.6 Identities = 24/62 (38%), Positives = 31/62 (50%), Gaps = 7/62 (11%) Frame = +1 Query: 367 RSNHQEDCSQPEQAQGGPAAVLSPW--ARRCLPDGR*SSLQ-----EEHCPVRRSWRMGG 525 R N Q C+ + QGG + L ARR L R SSL+ EE+ P+RR + G Sbjct: 215 RQNSQNYCALEQSGQGGSTSALEQLQRARRRLISQR-SSLETLEDIEENAPLRRCRTLSG 273 Query: 526 SP 531 SP Sbjct: 274 SP 275
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein of the| cerebellum 5) Length = 639 Score = 25.8 bits (55), Expect(2) = 2.1 Identities = 10/23 (43%), Positives = 14/23 (60%) Frame = -2 Query: 331 PPPPKPSFLAKFCPCLAGGGATS 263 PPPP P L+ + +GGG +S Sbjct: 143 PPPPPPPALSGYTTTNSGGGGSS 165 Score = 23.9 bits (50), Expect(2) = 2.1 Identities = 10/22 (45%), Positives = 12/22 (54%) Frame = -2 Query: 379 GDYFVGRPSNHEQNTTPPPPKP 314 G Y G S+ Q + PPPP P Sbjct: 110 GSYPCGGGSSGAQPSAPPPPAP 131
>CRLS1_RAT (Q5U2V5) Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase)| (CLS) Length = 302 Score = 29.3 bits (64), Expect = 7.8 Identities = 23/64 (35%), Positives = 24/64 (37%), Gaps = 7/64 (10%) Frame = -1 Query: 497 GQCSSWRLLHRPSGKHRRAQGERTAAGPP*ACS-GCEQSSW*L------LRRPPVKPRAE 339 G S R+ RP G G R A PP AC GC W L LR P PR Sbjct: 9 GAWGSLRVAVRPPGARLGRGGSRRALLPPAACCLGCLAERWRLRPAAFALRLPGTSPRTH 68 Query: 338 HDAA 327 A Sbjct: 69 CSGA 72 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 78,034,317 Number of Sequences: 219361 Number of extensions: 1629391 Number of successful extensions: 4790 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4410 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4776 length of database: 80,573,946 effective HSP length: 105 effective length of database: 57,541,041 effective search space used: 4488201198 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)