ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11n06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1TX16_PHORI (P83893) Non-toxic venom protein PRTx16C0 30 5.2
2BCL9_PIG (Q95KQ6) B-cell lymphoma 9 protein (Bcl-9) (Fragment) 30 6.8
3CADH1_ARACO (P42495) Cinnamyl-alcohol dehydrogenase 1 (EC 1.1.1.... 30 8.9
4BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9) 30 8.9

>TX16_PHORI (P83893) Non-toxic venom protein PRTx16C0|
          Length = 64

 Score = 30.4 bits (67), Expect = 5.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -3

Query: 462 PNSTGEIRMGCPGKEGLLVHPI 397
           PN   E + GCP KEGL+  PI
Sbjct: 37  PNDYNEYKFGCPCKEGLICSPI 58



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>BCL9_PIG (Q95KQ6) B-cell lymphoma 9 protein (Bcl-9) (Fragment)|
          Length = 130

 Score = 30.0 bits (66), Expect = 6.8
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 520 QGTRPCTVDNGAIPYPVGGT---QFNRRNQNGMPGKGRPARSSNLPRSS 383
           QG  P       +P+P  G    Q N     G PG+G   R SNLP+SS
Sbjct: 61  QGFPPVQSPPQQVPFPHNGPSGGQGNFPGGMGFPGEGPLGRPSNLPQSS 109



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>CADH1_ARACO (P42495) Cinnamyl-alcohol dehydrogenase 1 (EC 1.1.1.195) (CAD)|
          Length = 360

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
 Frame = +2

Query: 356 ITATSVHSK*ATRQIG*TSRPSFPGHPILISPVELGT-------SDWIRDGTIINRARAC 514
           I  T +H       +G ++ P  PGH ++   VE+G+        D + DGTI+   + C
Sbjct: 46  ICHTDIHQ--IKNDLGASNYPMVPGHEVVGEVVEVGSDVTKFKVGDCVGDGTIVGCCKTC 103



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>BCL9_MOUSE (Q9D219) B-cell lymphoma 9 protein (Bcl-9)|
          Length = 1425

 Score = 29.6 bits (65), Expect = 8.9
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = -2

Query: 520  QGTRPCTVDNGAIPYPVGGT---QFNRRNQNGMPGKGRPARSSNLPRSS 383
            QG  P       +P+P  G    Q N     G PG+G   R SNLP+SS
Sbjct: 1138 QGFPPVQSPPQQVPFPHNGPTGGQGNFPGGIGFPGEGPLGRPSNLPQSS 1186


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,894,205
Number of Sequences: 219361
Number of extensions: 2076633
Number of successful extensions: 4870
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4717
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4869
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6712189044
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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