ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11n03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ632328.1| Cotesia congregata virus complete genome, segmen... 44 0.56
2emb|AJ632321.1| Cotesia congregata virus complete genome, segmen... 44 0.56
3gb|AC170805.2| Mus musculus BAC clone RP24-363B14 from chromosom... 42 2.2
4gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
5emb|X56616.3|DASOR Desulfurolobus ambivalens tnpA, tnpB, rfbD an... 42 2.2
6emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) com... 42 2.2
7emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 ... 42 2.2
8gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-4... 42 2.2
9dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 2.2
10gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 2.2
11gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosom... 42 2.2
12gb|AC145078.2| Mus musculus chromosome 1, clone RP24-439O10, com... 40 8.8
13gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Canc... 40 8.8
14ref|XM_522163.1| PREDICTED: Pan troglodytes similar to MMP27 (LO... 40 8.8
15ref|NM_022122.2| Homo sapiens matrix metallopeptidase 27 (MMP27)... 40 8.8
16gb|AC147066.2| Pan troglodytes BAC clone RP43-164F2 from 7, comp... 40 8.8
17gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome 40 8.8
18ref|XM_860922.1| PREDICTED: Canis familiaris similar to Vezatin,... 40 8.8
19ref|XM_847496.1| PREDICTED: Canis familiaris similar to Vezatin,... 40 8.8
20gb|AC146512.2| Pan troglodytes BAC clone RP43-16E21 from 7, comp... 40 8.8
21gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, com... 40 8.8
22gb|AC013302.14| Homo sapiens chromosome , clone RP11-3P9, comple... 40 8.8
23gb|AY358752.1| Homo sapiens clone DNA96871 MMP27 (UNQ2503) mRNA,... 40 8.8
24emb|Z94162.1|HSN21F1 Human DNA sequence from clone LL22NC03-21F1... 40 8.8
25emb|AL391478.14| Human DNA sequence from clone RP11-552I13 on ch... 40 8.8
26emb|AL035552.9|HS162O13 Human DNA sequence from clone RP6-162O13... 40 8.8
27ref|XM_795171.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.8
28emb|CR848747.8| Zebrafish DNA sequence from clone DKEYP-77H1 in ... 40 8.8
29emb|AL035592.1|SPCC1393 S.pombe chromosome III cosmid c1393 40 8.8
30emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chr... 40 8.8
31gb|AF216808.7| Homo sapiens chromosome 8 clone RP5-826O12, GS1-1... 40 8.8
32gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map ... 40 8.8
33gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 1... 40 8.8
34dbj|AK166314.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cD... 40 8.8
35dbj|AK032946.1| Mus musculus 12 days embryo male wolffian duct i... 40 8.8
36emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 i... 40 8.8
37ref|NM_001022955.1| Schizosaccharomyces pombe 972h- hypothetical... 40 8.8
38dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
39dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
40emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 i... 40 8.8
41gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease MMP-2... 40 8.8
42dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.8
43gb|AF466202.2| Zea mays putative pol protein gene, partial cds; ... 40 8.8
44gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, compl... 40 8.8
45emb|AL450341.10| Mouse DNA sequence from clone RP23-401L17 on ch... 40 8.8
46dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 8.8
47dbj|AP000851.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 8.8
48dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:... 40 8.8
49gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 8.8
50emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374... 40 8.8
51emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, ... 40 8.8
52dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone... 40 8.8 
>emb|AJ632328.1| Cotesia congregata virus complete genome, segment Circle30
          Length = 19820

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 320   gattttttagaaacaaaaaagg 341
             ||||||||||||||||||||||
Sbjct: 10009 gattttttagaaacaaaaaagg 10030
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>emb|AJ632321.1| Cotesia congregata virus complete genome, segment Circle19
          Length = 18768

 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 320  gattttttagaaacaaaaaagg 341
            ||||||||||||||||||||||
Sbjct: 8422 gattttttagaaacaaaaaagg 8401



 Score = 44.1 bits (22), Expect = 0.56
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 320  gattttttagaaacaaaaaagg 341
            ||||||||||||||||||||||
Sbjct: 1887 gattttttagaaacaaaaaagg 1866
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>gb|AC170805.2| Mus musculus BAC clone RP24-363B14 from chromosome 16, complete
             sequence
          Length = 149317

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 318   ttgattttttagaaacaaaaaaggc 342
             |||| ||||||||||||||||||||
Sbjct: 25807 ttgactttttagaaacaaaaaaggc 25831
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>gb|AC123515.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0033E08, complete sequence
          Length = 149241

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 324   ttttagaaacaaaaaaggcatctga 348
             ||||||||| |||||||||||||||
Sbjct: 15030 ttttagaaaaaaaaaaggcatctga 15054
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>emb|X56616.3|DASOR Desulfurolobus ambivalens tnpA, tnpB, rfbD and sor genes and ORF2,
            ORF3, ORF4 and ORF5
          Length = 6170

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 260  gtaaaaagaaatccctcctcc 280
            |||||||||||||||||||||
Sbjct: 5669 gtaaaaagaaatccctcctcc 5649
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>emb|AL445564.1|MPULM02 Mycoplasma pulmonis (strain UAB CTIP) complete genome; segment 2/3
          Length = 321250

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 320    gattttttagaaacaaaaaag 340
              |||||||||||||||||||||
Sbjct: 310321 gattttttagaaacaaaaaag 310341
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>emb|CR385021.12| Zebrafish DNA sequence from clone CH211-200N15 in linkage group 16,
             complete sequence
          Length = 148046

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 435   tgtaattattatgcaaaaata 455
             |||||||||||||||||||||
Sbjct: 33762 tgtaattattatgcaaaaata 33742
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>gb|AC148995.2| Medicago truncatula chromosome 7 BAC clone mth2-49l23, complete
             sequence
          Length = 128239

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 465   tgaatttaaactttaaacaaa 485
             |||||||||||||||||||||
Sbjct: 72763 tgaatttaaactttaaacaaa 72783
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 324     ttttagaaacaaaaaaggcatctga 348
               ||||||||| |||||||||||||||
Sbjct: 5679473 ttttagaaaaaaaaaaggcatctga 5679497
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 324     ttttagaaacaaaaaaggcatctga 348
               ||||||||| |||||||||||||||
Sbjct: 5745950 ttttagaaaaaaaaaaggcatctga 5745974
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>gb|AC163644.4| Mus musculus BAC clone RP24-394I24 from chromosome 16, complete
             sequence
          Length = 177627

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 318   ttgattttttagaaacaaaaaaggc 342
             |||| ||||||||||||||||||||
Sbjct: 28291 ttgactttttagaaacaaaaaaggc 28267
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>gb|AC145078.2| Mus musculus chromosome 1, clone RP24-439O10, complete sequence
          Length = 162864

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    tcatcatctttaaacacagc 231
              ||||||||||||||||||||
Sbjct: 134129 tcatcatctttaaacacagc 134110
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>gb|AC152987.1| Mus musculus 6 BAC RP23-133N21 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 196532

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 460   ggttctgaatttaaacttta 479
             ||||||||||||||||||||
Sbjct: 28118 ggttctgaatttaaacttta 28099
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>ref|XM_522163.1| PREDICTED: Pan troglodytes similar to MMP27 (LOC466763), mRNA
          Length = 1542

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 389 gccagctgatctgcaagctg 408
           ||||||||||||||||||||
Sbjct: 975 gccagctgatctgcaagctg 994
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>ref|NM_022122.2| Homo sapiens matrix metallopeptidase 27 (MMP27), mRNA
          Length = 1647

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 389  gccagctgatctgcaagctg 408
            ||||||||||||||||||||
Sbjct: 998  gccagctgatctgcaagctg 1017
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>gb|AC147066.2| Pan troglodytes BAC clone RP43-164F2 from 7, complete sequence
          Length = 149431

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 40    aaaagaagaagacctaaagt 59
             ||||||||||||||||||||
Sbjct: 30469 aaaagaagaagacctaaagt 30450
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>gb|AE017199.1| Nanoarchaeum equitans Kin4-M, complete genome
          Length = 490885

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 309   atacaaatcttgatttttta 328
             ||||||||||||||||||||
Sbjct: 48584 atacaaatcttgatttttta 48603
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>ref|XM_860922.1| PREDICTED: Canis familiaris similar to Vezatin, transcript variant 4
            (LOC612906), mRNA
          Length = 2343

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  atgcaggttctgaatttaaa 474
            ||||||||||||||||||||
Sbjct: 2315 atgcaggttctgaatttaaa 2334
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>ref|XM_847496.1| PREDICTED: Canis familiaris similar to Vezatin, transcript variant 1
            (LOC612906), mRNA
          Length = 2918

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 455  atgcaggttctgaatttaaa 474
            ||||||||||||||||||||
Sbjct: 2890 atgcaggttctgaatttaaa 2909
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>gb|AC146512.2| Pan troglodytes BAC clone RP43-16E21 from 7, complete sequence
          Length = 178648

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 40     aaaagaagaagacctaaagt 59
              ||||||||||||||||||||
Sbjct: 154031 aaaagaagaagacctaaagt 154050
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>gb|AC102566.9| Mus musculus chromosome 9, clone RP23-223D10, complete sequence
          Length = 253343

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   taattattatgcaaaaatat 456
             ||||||||||||||||||||
Sbjct: 46821 taattattatgcaaaaatat 46840
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>gb|AC013302.14| Homo sapiens chromosome , clone RP11-3P9, complete sequence
          Length = 161739

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   atatacaaatcttgattttt 326
             ||||||||||||||||||||
Sbjct: 21389 atatacaaatcttgattttt 21408
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>gb|AY358752.1| Homo sapiens clone DNA96871 MMP27 (UNQ2503) mRNA, complete cds
          Length = 1647

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 389  gccagctgatctgcaagctg 408
            ||||||||||||||||||||
Sbjct: 998  gccagctgatctgcaagctg 1017
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>emb|Z94162.1|HSN21F1 Human DNA sequence from clone LL22NC03-21F1 on chromosome 22,
            complete sequence
          Length = 39212

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 311  acaaatcttgattttttaga 330
            ||||||||||||||||||||
Sbjct: 4423 acaaatcttgattttttaga 4442
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>emb|AL391478.14| Human DNA sequence from clone RP11-552I13 on chromosome 10 Contains part
              of the NRG3 gene for neuregulin 3, complete sequence
          Length = 180625

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 304    gaaatatacaaatcttgatttttt 327
              |||||||||||| |||||||||||
Sbjct: 167292 gaaatatacaaaccttgatttttt 167269
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>emb|AL035552.9|HS162O13 Human DNA sequence from clone RP6-162O13 on chromosome Xq21.31-21.33
              Contains the 3' end of a novel gene (FLJ30678) and a novel
              pseudogene, complete sequence
          Length = 149731

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 318    ttgattttttagaaacaaaa 337
              ||||||||||||||||||||
Sbjct: 102838 ttgattttttagaaacaaaa 102819
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>ref|XM_795171.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC584070 (LOC584070), mRNA
          Length = 1104

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 160 catctctcccatttccttta 179
           ||||||||||||||||||||
Sbjct: 588 catctctcccatttccttta 569
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>emb|CR848747.8| Zebrafish DNA sequence from clone DKEYP-77H1 in linkage group 16,
              complete sequence
          Length = 182850

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 444    tatgcaaaaatatgcaggtt 463
              ||||||||||||||||||||
Sbjct: 145727 tatgcaaaaatatgcaggtt 145746
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>emb|AL035592.1|SPCC1393 S.pombe chromosome III cosmid c1393
          Length = 32625

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tgattttttagaaacaaaaa 338
             ||||||||||||||||||||
Sbjct: 11361 tgattttttagaaacaaaaa 11342
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>emb|AL603917.5| Mouse DNA sequence from clone RP23-107J13 on chromosome 11 Contains a
              novel gene, a glyoxalase 1 (Glo1) pseudogene and a
              pseudogene similar to part of nuclear pore membrane protein
              121 Pom121, complete sequence
          Length = 212255

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 299    aagaggaaatatacaaatct 318
              ||||||||||||||||||||
Sbjct: 177200 aagaggaaatatacaaatct 177219
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>gb|AF216808.7| Homo sapiens chromosome 8 clone RP5-826O12, GS1-141O6, RP1-124D8 map
             8p21-p11, complete sequence
          Length = 215385

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   atatacaaatcttgattttt 326
             ||||||||||||||||||||
Sbjct: 65042 atatacaaatcttgattttt 65061
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>gb|AC092868.2| Homo sapiens chromosome 15 clone RP11-356M20 map 15q21.3, complete
             sequence
          Length = 157533

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   atgctggttctgaagtgttt 545
             ||||||||||||||||||||
Sbjct: 68497 atgctggttctgaagtgttt 68478
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>gb|AC091748.3| Homo sapiens chromosome 15 clone RP11-99L18 map 15q21.3, complete
             sequence
          Length = 150294

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 526   atgctggttctgaagtgttt 545
             ||||||||||||||||||||
Sbjct: 40176 atgctggttctgaagtgttt 40157
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>dbj|AK166314.1| Mus musculus mammary gland RCB-0526 Jyg-MC(A) cDNA, RIKEN full-length
            enriched library, clone:G830036B20 product:hypothetical
            protein, full insert sequence
          Length = 3829

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 527  tgctggttctgaagtgtttg 546
            ||||||||||||||||||||
Sbjct: 2536 tgctggttctgaagtgtttg 2517
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>dbj|AK032946.1| Mus musculus 12 days embryo male wolffian duct includes surrounding
            region cDNA, RIKEN full-length enriched library,
            clone:6720477O08 product:unclassifiable, full insert
            sequence
          Length = 2544

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 460  ggttctgaatttaaacttta 479
            ||||||||||||||||||||
Sbjct: 1207 ggttctgaatttaaacttta 1226
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>emb|BX323460.10| Zebrafish DNA sequence from clone DKEYP-47G11 in linkage group 3,
            complete sequence
          Length = 202017

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  tcctcagacgatgaacaagg 433
            ||||||||||||||||||||
Sbjct: 7826 tcctcagacgatgaacaagg 7807
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>ref|NM_001022955.1| Schizosaccharomyces pombe 972h- hypothetical protein
           (SPCC1393.06c), partial mRNA
          Length = 1227

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 319 tgattttttagaaacaaaaa 338
           ||||||||||||||||||||
Sbjct: 78  tgattttttagaaacaaaaa 97
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 618      aacgagagcccgaaggagcaggca 641
                |||||||||||||||||| |||||
Sbjct: 26647683 aacgagagcccgaaggaggaggca 26647706
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 321      attttttagaaacaaaaaag 340
                ||||||||||||||||||||
Sbjct: 35451392 attttttagaaacaaaaaag 35451373
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>emb|AL935329.11| Zebrafish DNA sequence from clone CH211-253P2 in linkage group 12,
             complete sequence
          Length = 172778

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 319   tgattttttagaaacaaaaa 338
             ||||||||||||||||||||
Sbjct: 58302 tgattttttagaaacaaaaa 58283
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>gb|AF195192.1|AF195192 Homo sapiens matrix metalloprotease MMP-27 mRNA, complete cds
          Length = 1655

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 389  gccagctgatctgcaagctg 408
            ||||||||||||||||||||
Sbjct: 981  gccagctgatctgcaagctg 1000
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>dbj|AP003734.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1088C09
          Length = 154084

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 321   attttttagaaacaaaaaag 340
             ||||||||||||||||||||
Sbjct: 75341 attttttagaaacaaaaaag 75322
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>gb|AF466202.2| Zea mays putative pol protein gene, partial cds; and putative gag-pol
             precursor -orf2, putative Fourf gag/pol protein, putative
             NADP-dependent malic enzyme, putative argonaute protein,
             putative pinhead protein, putative pol protein, putative
             gag protein, putative TNP2, r1-B73 proteins, putative
             genetic modifier, putative S-receptor kinase, putative
             aldose reductase-related protein, putative glutathione
             peroxidase, putative glycerol 3-phosphate permease,
             putative response regulator, and putative 4-coumarate-CoA
             ligase-like protein genes, complete cds
          Length = 290350

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 437   taattattatgcaaaaatat 456
             ||||||||||||||||||||
Sbjct: 56632 taattattatgcaaaaatat 56651
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>gb|AC154663.2| Mus musculus BAC clone RP24-283H12 from 16, complete sequence
          Length = 177341

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   tatacaaatcttgatttttt 327
             ||||||||||||||||||||
Sbjct: 28755 tatacaaatcttgatttttt 28736
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>emb|AL450341.10| Mouse DNA sequence from clone RP23-401L17 on chromosome 2, complete
              sequence
          Length = 214573

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 527    tgctggttctgaagtgtttg 546
              ||||||||||||||||||||
Sbjct: 189394 tgctggttctgaagtgtttg 189375
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>dbj|AP001689.1| Homo sapiens genomic DNA, chromosome 21q, section 33/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 76     aagaatgagtgaagccaacggata 99
              ||||||||||||| ||||||||||
Sbjct: 334466 aagaatgagtgaaaccaacggata 334443
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>dbj|AP000851.4| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-817J15, complete
              sequences
          Length = 172981

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 389    gccagctgatctgcaagctg 408
              ||||||||||||||||||||
Sbjct: 148125 gccagctgatctgcaagctg 148106
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>dbj|AP000469.3| Homo sapiens genomic DNA, chromosome 21q, clone:RP11-132H24, complete
             sequence
          Length = 136804

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 76    aagaatgagtgaagccaacggata 99
             ||||||||||||| ||||||||||
Sbjct: 17583 aagaatgagtgaaaccaacggata 17560
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 618      aacgagagcccgaaggagcaggca 641
                |||||||||||||||||| |||||
Sbjct: 26575852 aacgagagcccgaaggaggaggca 26575875
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>emb|AL731891.2|CNS08C8V Oryza sativa chromosome 12, . BAC OJ1374_A04 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 101173

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 618   aacgagagcccgaaggagcaggca 641
             |||||||||||||||||| |||||
Sbjct: 66553 aacgagagcccgaaggaggaggca 66576
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>emb|AL928740.6| Zebrafish DNA sequence from clone CH211-129O13, complete sequence
          Length = 177281

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 414    tcctcagacgatgaacaagg 433
              ||||||||||||||||||||
Sbjct: 164439 tcctcagacgatgaacaagg 164458
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>dbj|AP004960.1| Lotus japonicus genomic DNA, chromosome 6, clone:LjT19B18, TM0139,
             complete sequence
          Length = 106089

 Score = 40.1 bits (20), Expect = 8.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 316   tcttgattttttagaaacaaaaaaggca 343
             ||||||||||||| ||| ||||||||||
Sbjct: 18002 tcttgattttttaaaaataaaaaaggca 17975


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,411,388
Number of Sequences: 3902068
Number of extensions: 6411388
Number of successful extensions: 128785
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 128474
Number of HSP's gapped (non-prelim): 311
length of query: 645
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 622
effective length of database: 17,143,297,704
effective search space: 10663131171888
effective search space used: 10663131171888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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