ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11m23
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloropla... 247 2e-65
2THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast pr... 240 3e-63
3THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloropla... 239 4e-63
4THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast pr... 237 2e-62
5THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast pr... 233 3e-61
6THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial ... 142 1e-33
7THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial ... 139 1e-32
8THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial ... 136 6e-32
9THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial ... 131 2e-30
10THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial ... 131 2e-30
11THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial ... 100 4e-21
12THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme 86 1e-16
13THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme 84 5e-16
14THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme 83 6e-16
15THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme 82 1e-15
16THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme 81 2e-15
17THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme 72 1e-12
18THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme 69 9e-12
19THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme 69 1e-11
20THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme 68 2e-11
21THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme 67 5e-11
22THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme 64 5e-10
23THI4_METTH (O27657) Putative thiazole biosynthetic enzyme 63 9e-10
24THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme 61 3e-09
25THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments) 54 5e-07
26RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2... 35 0.20
27RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2... 35 0.25
28RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2... 35 0.25
29RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, b... 32 1.7
30GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2) 32 2.2
31MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, trac... 31 3.7
32ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarat... 30 4.8
33PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain... 30 6.3
34RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2... 30 6.3
35RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2... 30 6.3
36PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-) 30 8.2
37YWS4_CAEEL (Q10940) Hypothetical protein B0310.4 30 8.2

>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor|
          Length = 354

 Score =  247 bits (631), Expect = 2e-65
 Identities = 123/143 (86%), Positives = 131/143 (91%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMN AED I
Sbjct: 213 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEI 272

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295
           VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+ 
Sbjct: 273 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIP 332

Query: 294 NVTPALHPEMILAASNNADIVDA 226
            V+PAL  E ++ AS + ++VDA
Sbjct: 333 EVSPALREEFVI-ASKDDEVVDA 354



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>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor|
          Length = 356

 Score =  240 bits (612), Expect = 3e-63
 Identities = 119/143 (83%), Positives = 131/143 (91%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI+ VPGMKALDMN+AEDAI
Sbjct: 217 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAI 276

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295
           VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PN +DGT  
Sbjct: 277 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT-- 334

Query: 294 NVTPALHPEMILAASNNADIVDA 226
                +HPE+ILAA+++A+  DA
Sbjct: 335 -YVGGVHPELILAAADSAETADA 356



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>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor|
          Length = 354

 Score =  239 bits (611), Expect = 4e-63
 Identities = 121/143 (84%), Positives = 131/143 (91%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMNTAED I
Sbjct: 216 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEI 275

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295
           VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+ 
Sbjct: 276 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTM- 334

Query: 294 NVTPALHPEMILAASNNADIVDA 226
             +P L  E+++A  ++ ++VDA
Sbjct: 335 --SPPLREELMIAYKDD-EVVDA 354



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>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)|
          Length = 352

 Score =  237 bits (605), Expect = 2e-62
 Identities = 118/143 (82%), Positives = 128/143 (89%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK L+ IGMI  VPGMKALDMN AEDAI
Sbjct: 213 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAI 272

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295
           VRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PN +DG   
Sbjct: 273 VRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDG--- 329

Query: 294 NVTPALHPEMILAASNNADIVDA 226
           +    +HPE+ILAA+++A+I DA
Sbjct: 330 SYVGGIHPELILAAADSAEIADA 352



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>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)|
          Length = 349

 Score =  233 bits (595), Expect = 3e-61
 Identities = 119/143 (83%), Positives = 127/143 (88%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NH TQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI  VPGMKALDMNTAEDAI
Sbjct: 210 NHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAI 269

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295
           VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA  LALKALG PN IDGTL 
Sbjct: 270 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL- 328

Query: 294 NVTPALHPEMILAASNNADIVDA 226
                L PE++LAA+++A+ VDA
Sbjct: 329 --VGNLSPELVLAAADSAETVDA 349



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>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor|
           (Stress-inducible protein sti35)
          Length = 324

 Score =  142 bits (357), Expect = 1e-33
 Identities = 68/109 (62%), Positives = 86/109 (78%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           +HD QSCMDPN + A +V+S+ GHD P GA  VKRL  +G I+ + GM+ LDMN AEDAI
Sbjct: 207 HHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAI 266

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
           V+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA  ALK +
Sbjct: 267 VKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315



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>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor|
           (Stress-inducible protein sti35)
          Length = 320

 Score =  139 bits (349), Expect = 1e-32
 Identities = 67/107 (62%), Positives = 84/107 (78%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           +HD QSCMDPN + A +++S+ GHDGP GA  VKRL  +  I+ + GM+ LDMN AEDAI
Sbjct: 203 HHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAI 262

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 334
           V+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA  ALK
Sbjct: 263 VKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309



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>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 327

 Score =  136 bits (342), Expect = 6e-32
 Identities = 65/107 (60%), Positives = 82/107 (76%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           +HD  SCMDPN + A V++S+ GHDGPFGA   KRL  +G +  + GM+ LDMN+AEDAI
Sbjct: 210 HHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAI 269

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 334
           V+ TREV  G+I+ GME++EIDG  RMGPTFGAM++SG KAA  ALK
Sbjct: 270 VKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316



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>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 328

 Score =  131 bits (330), Expect = 2e-30
 Identities = 67/106 (63%), Positives = 77/106 (72%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NH  QSCMDPN + A +VVS+ GHDGPFGA  VKRL    ++  +  M+ LDMN AED I
Sbjct: 209 NHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLI 268

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 337
           V+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA  AL
Sbjct: 269 VKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314



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>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 338

 Score =  131 bits (330), Expect = 2e-30
 Identities = 62/111 (55%), Positives = 83/111 (74%)
 Frame = -1

Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475
           NHD QSCMDP+ + A +V S  GHDGPFGA  VKR+   G+ + +  M+ LDM  AED I
Sbjct: 215 NHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHI 274

Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 322
              TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L R
Sbjct: 275 ANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDR 325



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>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor|
          Length = 326

 Score =  100 bits (249), Expect = 4e-21
 Identities = 60/123 (48%), Positives = 70/123 (56%), Gaps = 17/123 (13%)
 Frame = -1

Query: 651 HDTQSCMDPNVMEAK---------------VVVSSCGHDGPFGATGVKRLQDIGMIQAVP 517
           H TQ CMDPNV+E                 V++S+ GHDGPFGA   KR+ DI   Q + 
Sbjct: 200 HGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLG 259

Query: 516 GMKALDMNTAEDAIVRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHL 343
           GMK LDMN AE  +V  +     V  M   GMEVAE+DG  RMGPTFGAM +SG  AA  
Sbjct: 260 GMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQ 319

Query: 342 ALK 334
            LK
Sbjct: 320 ILK 322



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>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme|
          Length = 274

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 46/105 (43%), Positives = 69/105 (65%)
 Frame = -1

Query: 639 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTR 460
           +C+DP  + A+ VV + GHD    A   ++L + GM++A   +  + +  +ED +V  T 
Sbjct: 162 TCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVEASK-LGPMWVERSEDLVVEKTG 216

Query: 459 EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 325
           EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L  + LG
Sbjct: 217 EVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261



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>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme|
          Length = 255

 Score = 83.6 bits (205), Expect = 5e-16
 Identities = 47/102 (46%), Positives = 59/102 (57%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  +EAK V+ S GH        VKR    G+++ +PG  A+     E   V+ TREV
Sbjct: 156 VDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREV 211

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            PG+ VTGM    I GAPRMGP FG M +SG+KAA   LK L
Sbjct: 212 FPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 253



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>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme|
          Length = 251

 Score = 83.2 bits (204), Expect = 6e-16
 Identities = 46/104 (44%), Positives = 61/104 (58%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  +EAK VV S GH        +KR    G+I+A+PG   +     E+  V  TREV
Sbjct: 152 VDPLTVEAKFVVDSTGHGAQISQHLLKR----GLIKAIPGEGPMWAEKGEELTVEHTREV 207

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 322
            PG+  TGM    + GAPRMGP FG M++SG+KAA   L+ LG+
Sbjct: 208 FPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251



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>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme|
          Length = 252

 Score = 82.4 bits (202), Expect = 1e-15
 Identities = 46/103 (44%), Positives = 60/103 (58%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  +EAK V+ S GH    GA   + L   G+I+ +PG  A+     E   V  T+EV
Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEV 208

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 325
            PG+ VTGM    + GAPRMGP FG M +SG+KAA   L+ LG
Sbjct: 209 FPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251



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>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme|
          Length = 252

 Score = 81.3 bits (199), Expect = 2e-15
 Identities = 47/102 (46%), Positives = 59/102 (57%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  +EAK V+ S GH    GA   + L   G+I+ +PG  A+     E   V  TREV
Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREV 208

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            PG+ VTGM    I GAPRMGP FG M +SG+KAA   L+ L
Sbjct: 209 FPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250



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>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme|
          Length = 262

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 40/102 (39%), Positives = 58/102 (56%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  + AK V+ S GHD     T  ++ +D+G+   VPG K++  +  E+++ R TREV
Sbjct: 160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREV 217

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            PG+ V GM         RMG  FG M +SG+K A L L+ L
Sbjct: 218 FPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259



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>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 69.3 bits (168), Expect = 9e-12
 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 1/103 (0%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQ-AVPGMKALDMNTAEDAIVRLTRE 457
           +DP ++  K+V+   GHD     T ++++ +  + +  + G K +     E   V  T+E
Sbjct: 155 VDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQE 214

Query: 456 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
           + PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct: 215 IYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257



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>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme|
          Length = 310

 Score = 68.9 bits (167), Expect = 1e-11
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 23/127 (18%)
 Frame = -1

Query: 639 SCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLQD--IGMIQA--------- 523
           +C+DP  +EA VVV + GHD          G   A G++ +++   GM Q+         
Sbjct: 164 TCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPG 223

Query: 522 --VPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAA 349
              PG  ++ +  +ED +V  T +V  G++  G+  A + G  RMGPTFGAM++SG+ AA
Sbjct: 224 HDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAA 283

Query: 348 HLALKAL 328
           +  +  L
Sbjct: 284 NAVMDEL 290



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>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQD--IGMIQAVPGMKALDMNTAEDAIVRLTR 460
           +DP ++  K+V+   GH+     T ++++ +  IG +  + G K +     E   V  T+
Sbjct: 155 VDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQ 213

Query: 459 EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
           E+ PG+IV GM       APRMGP FG M++SG+KAA LAL  L
Sbjct: 214 EIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257



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>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme|
          Length = 250

 Score = 67.0 bits (162), Expect = 5e-11
 Identities = 38/102 (37%), Positives = 56/102 (54%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  ++A  VV   GH     A  V  L   G+++       +D + AE  +V  T E+
Sbjct: 153 VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEI 207

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            PG++V+GM V  + G PRMGP FG M++SGQK A +  + L
Sbjct: 208 FPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249



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>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme|
          Length = 260

 Score = 63.5 bits (153), Expect = 5e-10
 Identities = 34/102 (33%), Positives = 55/102 (53%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  + ++ VV + GHD    +   ++   I +  +V G ++     AE  IV  T ++
Sbjct: 160 VDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKI 216

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
           V G+   GM VA +   PRMGP FG M++SG+K A +  + L
Sbjct: 217 VKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258



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>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme|
          Length = 266

 Score = 62.8 bits (151), Expect = 9e-10
 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRL-----QDIGMIQAVPGMKALDMNTAEDAIVR 469
           +DP  + A+ V+ + GHD        +++        G IQ   G +++  +  E A++ 
Sbjct: 162 VDPLTVRARAVIDATGHDCEIVKVVERKIGPELNTPDGRIQ---GERSMWADVGEAALIE 218

Query: 468 LTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            TREV P + V GM    + GAPRMGP FG M++SG++ A + ++ L
Sbjct: 219 NTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 265



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>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme|
          Length = 263

 Score = 60.8 bits (146), Expect = 3e-09
 Identities = 37/102 (36%), Positives = 54/102 (52%)
 Frame = -1

Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454
           +DP  + +KVVV + GH+       VK+ +   +   VPG K++     E+A++R TREV
Sbjct: 161 IDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREV 217

Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328
            P + V GM      G  RMG  FG M +SG+  A L  + L
Sbjct: 218 YPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259



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>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)|
          Length = 48

 Score = 53.5 bits (127), Expect = 5e-07
 Identities = 26/31 (83%), Positives = 28/31 (90%)
 Frame = -1

Query: 489 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPR 397
           AED IV+  RE+VPGMIVTGMEVAEIDGAPR
Sbjct: 18  AEDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48



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>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1228

 Score = 35.0 bits (79), Expect = 0.20
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 486  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 878  ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935

Query: 309  DGTLKNV 289
            +GT+ ++
Sbjct: 936  EGTVIDI 942



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>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1226

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 486  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 876  ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933

Query: 309  DGTLKNV 289
            +GT+ ++
Sbjct: 934  EGTVIDI 940



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>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1226

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 486  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310
            E  ++R+  EV PG I+ GM   +  G   + P +  +  I G+KA  +   +L  PNG 
Sbjct: 876  ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933

Query: 309  DGTLKNV 289
            +GT+ ++
Sbjct: 934  EGTVIDI 940



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>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'|
            chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase
            beta chain (Transcriptase beta chain) (RNA polymerase
            beta subunit); DNA-directed RNA polymerase beta' chain
            (Transcri
          Length = 2894

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
 Frame = -1

Query: 522  VPGMKALDM-NTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQK 355
            +PG K  +  +  E  IVR+   V  GMI+ G    ++     + PT    +   I G+K
Sbjct: 865  IPGTKEAETAHLDESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEK 920

Query: 354  AAHLALKALGRPNGIDGTLKNV 289
            A H+  K+L  P  ++GT+ +V
Sbjct: 921  AGHVVNKSLYCPPSLEGTVVDV 942



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>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)|
          Length = 205

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
 Frame = +2

Query: 314 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTSRVRR 472
           P G P A   L AR A  WP + + P V   LGAP+  + ++P  + PG+  R RR
Sbjct: 76  PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRR 128



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>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)|
            (High molecular weight salivary mucin MG1) (Sublingual
            gland mucin)
          Length = 5703

 Score = 30.8 bits (68), Expect = 3.7
 Identities = 16/64 (25%), Positives = 23/64 (35%)
 Frame = +2

Query: 392  PILGAPSISATSMPVTIMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAP 571
            P+    +I  +S P T    T    + T             PGT WI+    +  T  A 
Sbjct: 4286 PVATMSTIHPSSTPETTHTSTVLTTKATTRATSSTSTPSSTPGTTWILTELTTAATTTAG 4345

Query: 572  KGPS 583
             GP+
Sbjct: 4346 TGPT 4349



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>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate|
           aminotransferase (EC 2.6.1.-)
           (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate)
           aminotransferase) (UDP-Ara4O aminotransferase)
           (Polymyxin resistance protein pmrH)
          Length = 382

 Score = 30.4 bits (67), Expect = 4.8
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
 Frame = -1

Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 325
           ++ I  +TR +  G I TG E  +++   A R+G      + S   A H+AL ALG
Sbjct: 15  DEEIAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70



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>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing|
            protein 2) (Activated in prostate cancer protein)
          Length = 2839

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 18/45 (40%), Positives = 24/45 (53%)
 Frame = +1

Query: 379  AEGRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVLGRVHVKRLH 513
            ++G A   GT++ GD     N A   LAG AH  VL  +H  +LH
Sbjct: 2655 SQGAASQEGTMNRGDFLLSVNGA--SLAGLAHGNVLKVLHQAQLH 2697



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>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1155

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 486  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 310
            E+ I+R+   V PG I+ G    + +G   + P F  +  I G+KA  +   +L  P+G 
Sbjct: 816  ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873

Query: 309  DGTLKNV 289
            +GT+ +V
Sbjct: 874  EGTVIDV 880



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>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1155

 Score = 30.0 bits (66), Expect = 6.3
 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
 Frame = -1

Query: 486  EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 310
            E+ I+R+   V PG I+ G    + +G   + P F  +  I G+KA  +   +L  P+G 
Sbjct: 816  ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873

Query: 309  DGTLKNV 289
            +GT+ +V
Sbjct: 874  EGTVIDV 880



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>PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)|
          Length = 694

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = -1

Query: 288 TPALHPEMILAASNNADIVD 229
           TP LHPE I A    ADIVD
Sbjct: 3   TPRLHPETIAAVKERADIVD 22



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>YWS4_CAEEL (Q10940) Hypothetical protein B0310.4|
          Length = 112

 Score = 29.6 bits (65), Expect = 8.2
 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%)
 Frame = +1

Query: 364 GDHHGAE---GRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVL--GRVHVKRLHPG 519
           G+ H  E   G  H RG    G+ H G+ H  +   GE H G    G+ H    H G
Sbjct: 18  GETHRGETHRGETH-RGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRG 73


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 75,032,289
Number of Sequences: 219361
Number of extensions: 1437497
Number of successful extensions: 4749
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 4538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4721
length of database: 80,573,946
effective HSP length: 108
effective length of database: 56,882,958
effective search space used: 6200242422
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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