Clone Name | rbasd11m23 |
---|---|
Clone Library Name | barley_pub |
>THI42_MAIZE (Q41739) Thiazole biosynthetic enzyme 1-2, chloroplast precursor| Length = 354 Score = 247 bits (631), Expect = 2e-65 Identities = 123/143 (86%), Positives = 131/143 (91%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMN AED I Sbjct: 213 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNAAEDEI 272 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+ Sbjct: 273 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTIP 332 Query: 294 NVTPALHPEMILAASNNADIVDA 226 V+PAL E ++ AS + ++VDA Sbjct: 333 EVSPALREEFVI-ASKDDEVVDA 354
>THI4_CITSI (O23787) Thiazole biosynthetic enzyme, chloroplast precursor| Length = 356 Score = 240 bits (612), Expect = 3e-63 Identities = 119/143 (83%), Positives = 131/143 (91%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRL+ IGMI+ VPGMKALDMN+AEDAI Sbjct: 217 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAI 276 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK+LG+PN +DGT Sbjct: 277 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQPNALDGT-- 334 Query: 294 NVTPALHPEMILAASNNADIVDA 226 +HPE+ILAA+++A+ DA Sbjct: 335 -YVGGVHPELILAAADSAETADA 356
>THI41_MAIZE (Q41738) Thiazole biosynthetic enzyme 1-1, chloroplast precursor| Length = 354 Score = 239 bits (611), Expect = 4e-63 Identities = 121/143 (84%), Positives = 131/143 (91%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMI AVPGMKALDMNTAED I Sbjct: 216 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMISAVPGMKALDMNTAEDEI 275 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPN +DGT+ Sbjct: 276 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNAVDGTM- 334 Query: 294 NVTPALHPEMILAASNNADIVDA 226 +P L E+++A ++ ++VDA Sbjct: 335 --SPPLREELMIAYKDD-EVVDA 354
>THI4_ALNGL (Q38709) Thiazole biosynthetic enzyme, chloroplast precursor (AG6)| Length = 352 Score = 237 bits (605), Expect = 2e-62 Identities = 118/143 (82%), Positives = 128/143 (89%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVK L+ IGMI VPGMKALDMN AEDAI Sbjct: 213 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKSLRSIGMIDTVPGMKALDMNVAEDAI 272 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295 VRLTRE+VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG PN +DG Sbjct: 273 VRLTREIVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGLPNALDG--- 329 Query: 294 NVTPALHPEMILAASNNADIVDA 226 + +HPE+ILAA+++A+I DA Sbjct: 330 SYVGGIHPELILAAADSAEIADA 352
>THI4_ARATH (Q38814) Thiazole biosynthetic enzyme, chloroplast precursor (ARA6)| Length = 349 Score = 233 bits (595), Expect = 3e-61 Identities = 119/143 (83%), Positives = 127/143 (88%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NH TQSCMDPNVMEAK+VVSSCGHDGPFGATGVKRL+ IGMI VPGMKALDMNTAEDAI Sbjct: 210 NHHTQSCMDPNVMEAKIVVSSCGHDGPFGATGVKRLKSIGMIDHVPGMKALDMNTAEDAI 269 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGRPNGIDGTLK 295 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKA LALKALG PN IDGTL Sbjct: 270 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAGQLALKALGLPNAIDGTL- 328 Query: 294 NVTPALHPEMILAASNNADIVDA 226 L PE++LAA+++A+ VDA Sbjct: 329 --VGNLSPELVLAAADSAETVDA 349
>THI4_FUSSH (P23617) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 324 Score = 142 bits (357), Expect = 1e-33 Identities = 68/109 (62%), Positives = 86/109 (78%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 +HD QSCMDPN + A +V+S+ GHD P GA VKRL +G I+ + GM+ LDMN AEDAI Sbjct: 207 HHDDQSCMDPNTINAPLVISTTGHDAPMGAFCVKRLVSMGRIEKLGGMRGLDMNVAEDAI 266 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 V+ TRE+VPG+IV GME++E+DGA RMGPTFGAM++SG KAA ALK + Sbjct: 267 VKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMVLSGLKAAEEALKVI 315
>THI4_FUSOX (P23618) Thiazole biosynthetic enzyme, mitochondrial precursor| (Stress-inducible protein sti35) Length = 320 Score = 139 bits (349), Expect = 1e-32 Identities = 67/107 (62%), Positives = 84/107 (78%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 +HD QSCMDPN + A +++S+ GHDGP GA VKRL + I+ + GM+ LDMN AEDAI Sbjct: 203 HHDDQSCMDPNTINAPLIISTTGHDGPMGAFCVKRLVSMQRIEKLGGMRGLDMNLAEDAI 262 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 334 V+ TRE+VPG+IV GME++E+DGA RMGPTFGAM +SG KAA ALK Sbjct: 263 VKGTREIVPGLIVGGMELSEVDGANRMGPTFGAMALSGLKAAEEALK 309
>THI4_ASPOR (Q9UUZ9) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 327 Score = 136 bits (342), Expect = 6e-32 Identities = 65/107 (60%), Positives = 82/107 (76%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 +HD SCMDPN + A V++S+ GHDGPFGA KRL +G + + GM+ LDMN+AEDAI Sbjct: 210 HHDDHSCMDPNTINAPVIISTTGHDGPFGAFCAKRLVSMGSVDKLGGMRGLDMNSAEDAI 269 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 334 V+ TREV G+I+ GME++EIDG RMGPTFGAM++SG KAA ALK Sbjct: 270 VKNTREVTKGLIIGGMELSEIDGFNRMGPTFGAMVLSGVKAAEEALK 316
>THI2_SCHPO (P40998) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 328 Score = 131 bits (330), Expect = 2e-30 Identities = 67/106 (63%), Positives = 77/106 (72%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NH QSCMDPN + A +VVS+ GHDGPFGA VKRL ++ + M+ LDMN AED I Sbjct: 209 NHGLQSCMDPNTINAHLVVSATGHDGPFGAFCVKRLASAQLVSNLHDMRPLDMNRAEDLI 268 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLAL 337 V+ TREV PGMIV GME++E DGA RMGPTFG MM SG KAA AL Sbjct: 269 VKGTREVFPGMIVGGMELSEFDGANRMGPTFGGMMFSGIKAAQEAL 314
>THI4_UROFA (Q9UVF8) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 338 Score = 131 bits (330), Expect = 2e-30 Identities = 62/111 (55%), Positives = 83/111 (74%) Frame = -1 Query: 654 NHDTQSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAI 475 NHD QSCMDP+ + A +V S GHDGPFGA VKR+ G+ + + M+ LDM AED I Sbjct: 215 NHDHQSCMDPSTITAPLVCSFAGHDGPFGAFCVKRVASAGLSEGLGDMRPLDMERAEDHI 274 Query: 474 VRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 322 TRE++PG+IV GME++E DG+ RMGPTFGAM++SG++AA +AL++L R Sbjct: 275 ANKTREILPGLIVGGMELSEFDGSARMGPTFGAMLLSGKRAAEVALQSLDR 325
>THI4_YEAST (P32318) Thiazole biosynthetic enzyme, mitochondrial precursor| Length = 326 Score = 100 bits (249), Expect = 4e-21 Identities = 60/123 (48%), Positives = 70/123 (56%), Gaps = 17/123 (13%) Frame = -1 Query: 651 HDTQSCMDPNVMEAK---------------VVVSSCGHDGPFGATGVKRLQDIGMIQAVP 517 H TQ CMDPNV+E V++S+ GHDGPFGA KR+ DI Q + Sbjct: 200 HGTQCCMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLG 259 Query: 516 GMKALDMNTAEDAIVRLTREV--VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHL 343 GMK LDMN AE +V + V M GMEVAE+DG RMGPTFGAM +SG AA Sbjct: 260 GMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQ 319 Query: 342 ALK 334 LK Sbjct: 320 ILK 322
>THI4_AERPE (Q9Y9Z0) Putative thiazole biosynthetic enzyme| Length = 274 Score = 85.9 bits (211), Expect = 1e-16 Identities = 46/105 (43%), Positives = 69/105 (65%) Frame = -1 Query: 639 SCMDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTR 460 +C+DP + A+ VV + GHD A ++L + GM++A + + + +ED +V T Sbjct: 162 TCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVEASK-LGPMWVERSEDLVVEKTG 216 Query: 459 EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 325 EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L + LG Sbjct: 217 EVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 261
>THI4_PYRHO (O59082) Putative thiazole biosynthetic enzyme| Length = 255 Score = 83.6 bits (205), Expect = 5e-16 Identities = 47/102 (46%), Positives = 59/102 (57%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP +EAK V+ S GH VKR G+++ +PG A+ E V+ TREV Sbjct: 156 VDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREV 211 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 PG+ VTGM I GAPRMGP FG M +SG+KAA LK L Sbjct: 212 FPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 253
>THI4_PYRKO (Q5JD25) Putative thiazole biosynthetic enzyme| Length = 251 Score = 83.2 bits (204), Expect = 6e-16 Identities = 46/104 (44%), Positives = 61/104 (58%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP +EAK VV S GH +KR G+I+A+PG + E+ V TREV Sbjct: 152 VDPLTVEAKFVVDSTGHGAQISQHLLKR----GLIKAIPGEGPMWAEKGEELTVEHTREV 207 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALGR 322 PG+ TGM + GAPRMGP FG M++SG+KAA L+ LG+ Sbjct: 208 FPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251
>THI4_PYRFU (Q8U0Q5) Putative thiazole biosynthetic enzyme| Length = 252 Score = 82.4 bits (202), Expect = 1e-15 Identities = 46/103 (44%), Positives = 60/103 (58%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP +EAK V+ S GH GA + L G+I+ +PG A+ E V T+EV Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEV 208 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKALG 325 PG+ VTGM + GAPRMGP FG M +SG+KAA L+ LG Sbjct: 209 FPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251
>THI4_PYRAB (Q9V0J8) Putative thiazole biosynthetic enzyme| Length = 252 Score = 81.3 bits (199), Expect = 2e-15 Identities = 47/102 (46%), Positives = 59/102 (57%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP +EAK V+ S GH GA + L G+I+ +PG A+ E V TREV Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREV 208 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 PG+ VTGM I GAPRMGP FG M +SG+KAA L+ L Sbjct: 209 FPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250
>THI4_METMP (Q6LXJ8) Putative thiazole biosynthetic enzyme| Length = 262 Score = 72.0 bits (175), Expect = 1e-12 Identities = 40/102 (39%), Positives = 58/102 (56%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP + AK V+ S GHD T ++ +D+G+ VPG K++ + E+++ R TREV Sbjct: 160 IDPITISAKYVIDSTGHDASVINTLARKNKDLGI--EVPGEKSMWADKGENSLTRNTREV 217 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 PG+ V GM RMG FG M +SG+K A L L+ L Sbjct: 218 FPGLYVCGMAANAYHAGYRMGAIFGGMYLSGKKCAELILEKL 259
>THI4_METMA (Q8Q0B5) Putative thiazole biosynthetic enzyme| Length = 260 Score = 69.3 bits (168), Expect = 9e-12 Identities = 38/103 (36%), Positives = 58/103 (56%), Gaps = 1/103 (0%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQ-AVPGMKALDMNTAEDAIVRLTRE 457 +DP ++ K+V+ GHD T ++++ + + + + G K + E V T+E Sbjct: 155 VDPLMIRTKLVIDGTGHDAVVCNTILRKIPNAKIGEFGILGEKPMWSEVGERLAVDATQE 214 Query: 456 VVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 + PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 215 IYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_HALSA (Q9HMC7) Putative thiazole biosynthetic enzyme| Length = 310 Score = 68.9 bits (167), Expect = 1e-11 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 23/127 (18%) Frame = -1 Query: 639 SCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLQD--IGMIQA--------- 523 +C+DP +EA VVV + GHD G A G++ +++ GM Q+ Sbjct: 164 TCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPG 223 Query: 522 --VPGMKALDMNTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAA 349 PG ++ + +ED +V T +V G++ G+ A + G RMGPTFGAM++SG+ AA Sbjct: 224 HDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAA 283 Query: 348 HLALKAL 328 + + L Sbjct: 284 NAVMDEL 290
>THI4_METAC (Q8TM19) Putative thiazole biosynthetic enzyme| Length = 260 Score = 68.2 bits (165), Expect = 2e-11 Identities = 39/104 (37%), Positives = 59/104 (56%), Gaps = 2/104 (1%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQD--IGMIQAVPGMKALDMNTAEDAIVRLTR 460 +DP ++ K+V+ GH+ T ++++ + IG + + G K + E V T+ Sbjct: 155 VDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGELGLL-GEKPMWSEVGERLAVNATQ 213 Query: 459 EVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 E+ PG+IV GM APRMGP FG M++SG+KAA LAL L Sbjct: 214 EIYPGLIVAGMAANAATRAPRMGPVFGGMLLSGEKAAKLALDRL 257
>THI4_THEMA (Q9WZP4) Putative thiazole biosynthetic enzyme| Length = 250 Score = 67.0 bits (162), Expect = 5e-11 Identities = 38/102 (37%), Positives = 56/102 (54%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP ++A VV GH A V L G+++ +D + AE +V T E+ Sbjct: 153 VDPITVKASFVVDGTGHP----ANVVSLLAKRGLVEMKTEFP-MDADEAEKFVVDNTGEI 207 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 PG++V+GM V + G PRMGP FG M++SGQK A + + L Sbjct: 208 FPGLLVSGMAVCAVHGGPRMGPIFGGMILSGQKVARIVSERL 249
>THI4_ARCFU (O29556) Putative thiazole biosynthetic enzyme| Length = 260 Score = 63.5 bits (153), Expect = 5e-10 Identities = 34/102 (33%), Positives = 55/102 (53%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP + ++ VV + GHD + ++ I + +V G ++ AE IV T ++ Sbjct: 160 VDPLFLRSRAVVDATGHDAEVISVAARK---IPLEVSVVGERSAYSEVAEREIVEKTGKI 216 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 V G+ GM VA + PRMGP FG M++SG+K A + + L Sbjct: 217 VKGLYAAGMAVAAVHNLPRMGPIFGGMLLSGKKVAEIVAEDL 258
>THI4_METTH (O27657) Putative thiazole biosynthetic enzyme| Length = 266 Score = 62.8 bits (151), Expect = 9e-10 Identities = 35/107 (32%), Positives = 58/107 (54%), Gaps = 5/107 (4%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRL-----QDIGMIQAVPGMKALDMNTAEDAIVR 469 +DP + A+ V+ + GHD +++ G IQ G +++ + E A++ Sbjct: 162 VDPLTVRARAVIDATGHDCEIVKVVERKIGPELNTPDGRIQ---GERSMWADVGEAALIE 218 Query: 468 LTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 TREV P + V GM + GAPRMGP FG M++SG++ A + ++ L Sbjct: 219 NTREVYPNLYVAGMASNAVYGAPRMGPIFGGMLVSGRRVAEMIIEKL 265
>THI4_METJA (Q58018) Putative thiazole biosynthetic enzyme| Length = 263 Score = 60.8 bits (146), Expect = 3e-09 Identities = 37/102 (36%), Positives = 54/102 (52%) Frame = -1 Query: 633 MDPNVMEAKVVVSSCGHDGPFGATGVKRLQDIGMIQAVPGMKALDMNTAEDAIVRLTREV 454 +DP + +KVVV + GH+ VK+ + + VPG K++ E+A++R TREV Sbjct: 161 IDPLTIRSKVVVDATGHEASIVNILVKKNK---LEADVPGEKSMWAEKGENALLRNTREV 217 Query: 453 VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKAL 328 P + V GM G RMG FG M +SG+ A L + L Sbjct: 218 YPNLFVCGMAANASHGGYRMGAIFGGMYLSGKLCAELITEKL 259
>THI4_POPEU (P84548) Thiazole biosynthetic enzyme (Fragments)| Length = 48 Score = 53.5 bits (127), Expect = 5e-07 Identities = 26/31 (83%), Positives = 28/31 (90%) Frame = -1 Query: 489 AEDAIVRLTREVVPGMIVTGMEVAEIDGAPR 397 AED IV+ RE+VPGMIVTGMEVAEIDGAPR Sbjct: 18 AEDLIVKGGREIVPGMIVTGMEVAEIDGAPR 48
>RPOB_LEPBI (Q9KK59) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1228 Score = 35.0 bits (79), Expect = 0.20 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 878 ESGVIRVGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKEVRDSSLRMPNGF 935 Query: 309 DGTLKNV 289 +GT+ ++ Sbjct: 936 EGTVIDI 942
>RPOB_LEPIN (Q8F0S2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.25 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 309 DGTLKNV 289 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOB_LEPIC (Q72UA8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1226 Score = 34.7 bits (78), Expect = 0.25 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAM-MISGQKAAHLALKALGRPNGI 310 E ++R+ EV PG I+ GM + G + P + + I G+KA + +L PNG Sbjct: 876 ETGVIRIGAEVKPGDILVGMVTPK--GETDLTPEYKLLHSIFGEKAKDVRDSSLRMPNGF 933 Query: 309 DGTLKNV 289 +GT+ ++ Sbjct: 934 EGTVIDI 940
>RPOBC_HELHP (Q7VJ82) Bifunctional DNA-directed RNA polymerase, beta and beta'| chain (EC 2.7.7.6) [Includes: DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-directed RNA polymerase beta' chain (Transcri Length = 2894 Score = 32.0 bits (71), Expect = 1.7 Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 4/82 (4%) Frame = -1 Query: 522 VPGMKALDM-NTAEDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM---ISGQK 355 +PG K + + E IVR+ V GMI+ G ++ + PT + I G+K Sbjct: 865 IPGTKEAETAHLDESGIVRIGTYVSAGMILVG----KVSPKGEVKPTPEERLLRAIFGEK 920 Query: 354 AAHLALKALGRPNGIDGTLKNV 289 A H+ K+L P ++GT+ +V Sbjct: 921 AGHVVNKSLYCPPSLEGTVVDV 942
>GSCL_HUMAN (O15499) Homeobox protein goosecoid-like (GSC-2)| Length = 205 Score = 31.6 bits (70), Expect = 2.2 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Frame = +2 Query: 314 PFGRPRA---LSARCAAFWPEIIMAPKVGPILGAPSISATSMPVTIMPGTTSRVRR 472 P G P A L AR A WP + + P V LGAP+ + ++P + PG+ R RR Sbjct: 76 PCGPPEAAAGLGARLA--WP-LRLGPAVPLSLGAPAGGSGALPGAVGPGSQRRTRR 128
>MUC5B_HUMAN (Q9HC84) Mucin-5B precursor (Mucin 5 subtype B, tracheobronchial)| (High molecular weight salivary mucin MG1) (Sublingual gland mucin) Length = 5703 Score = 30.8 bits (68), Expect = 3.7 Identities = 16/64 (25%), Positives = 23/64 (35%) Frame = +2 Query: 392 PILGAPSISATSMPVTIMPGTTSRVRRTXXXXXXXXXXXXIPGTAWIMPMSWSRLTPVAP 571 P+ +I +S P T T + T PGT WI+ + T A Sbjct: 4286 PVATMSTIHPSSTPETTHTSTVLTTKATTRATSSTSTPSSTPGTTWILTELTTAATTTAG 4345 Query: 572 KGPS 583 GP+ Sbjct: 4346 TGPT 4349
>ARNB_PSEU2 (Q4ZSZ4) UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate| aminotransferase (EC 2.6.1.-) (UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase) (UDP-Ara4O aminotransferase) (Polymyxin resistance protein pmrH) Length = 382 Score = 30.4 bits (67), Expect = 4.8 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDG--APRMGPTFGAMMISGQKAAHLALKALG 325 ++ I +TR + G I TG E +++ A R+G + S A H+AL ALG Sbjct: 15 DEEIAAVTRVLRSGWITTGPECQKLEEEFAARVGARHAVALSSATGAMHVALLALG 70
>PDZK3_HUMAN (O15018) PDZ domain-containing protein 3 (PDZ domain-containing| protein 2) (Activated in prostate cancer protein) Length = 2839 Score = 30.0 bits (66), Expect = 6.3 Identities = 18/45 (40%), Positives = 24/45 (53%) Frame = +1 Query: 379 AEGRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVLGRVHVKRLH 513 ++G A GT++ GD N A LAG AH VL +H +LH Sbjct: 2655 SQGAASQEGTMNRGDFLLSVNGA--SLAGLAHGNVLKVLHQAQLH 2697
>RPOB_BORGA (Q661M9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 6.3 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 310 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 309 DGTLKNV 289 +GT+ +V Sbjct: 874 EGTVIDV 880
>RPOB_BORBU (Q59191) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1155 Score = 30.0 bits (66), Expect = 6.3 Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%) Frame = -1 Query: 486 EDAIVRLTREVVPGMIVTGMEVAEIDGAPRMGPTFGAMM-ISGQKAAHLALKALGRPNGI 310 E+ I+R+ V PG I+ G + +G + P F + I G+KA + +L P+G Sbjct: 816 ENGIIRIGTYVKPGDILVGKVTPKSEGD--ITPEFRLLTSIFGEKAKDVKNNSLKVPHGT 873 Query: 309 DGTLKNV 289 +GT+ +V Sbjct: 874 EGTVIDV 880
>PRIM_SYNP7 (P74893) DNA primase (EC 2.7.7.-)| Length = 694 Score = 29.6 bits (65), Expect = 8.2 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = -1 Query: 288 TPALHPEMILAASNNADIVD 229 TP LHPE I A ADIVD Sbjct: 3 TPRLHPETIAAVKERADIVD 22
>YWS4_CAEEL (Q10940) Hypothetical protein B0310.4| Length = 112 Score = 29.6 bits (65), Expect = 8.2 Identities = 19/57 (33%), Positives = 24/57 (42%), Gaps = 5/57 (8%) Frame = +1 Query: 364 GDHHGAE---GRAHSRGTVDLGDLHAGDNHARDDLAGEAHDGVL--GRVHVKRLHPG 519 G+ H E G H RG G+ H G+ H + GE H G G+ H H G Sbjct: 18 GETHRGETHRGETH-RGKTHRGETHRGETHRGETHRGETHRGETHRGKTHRGETHRG 73 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 75,032,289 Number of Sequences: 219361 Number of extensions: 1437497 Number of successful extensions: 4749 Number of sequences better than 10.0: 37 Number of HSP's better than 10.0 without gapping: 4538 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4721 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6200242422 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)