Clone Information

BLAST Search Result

Clone Name	rbasd11m21
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (At...	120	3e-27
2	VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (At...	117	2e-26
3	VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protei...	111	1e-24
4	VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (At...	110	2e-24
5	VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (At...	103	3e-22
6	VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (At...	94	2e-19
7	VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (At...	74	3e-13
8	VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (At...	69	5e-12
9	VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (At...	67	2e-11
10	VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (At...	65	1e-10
11	VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (At...	59	6e-09
12	SYB1_SCHPO (Q92356) Synaptobrevin homolog 1	59	6e-09
13	SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1	56	5e-08
14	SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insen...	56	5e-08
15	VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)	56	6e-08
16	VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)	56	6e-08
17	VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)	55	1e-07
18	VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP...	55	1e-07
19	VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP...	54	2e-07
20	VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8...	54	3e-07
21	NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synapt...	53	5e-07
22	SYB_APLCA (P35589) Synaptobrevin	52	7e-07
23	SYB_DROME (P18489) Synaptobrevin	51	2e-06
24	SNC1_YEAST (P31109) Synaptobrevin homolog 1	51	2e-06
25	SNC2_YEAST (P33328) Synaptobrevin homolog 2	50	4e-06
26	VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2...	49	8e-06
27	VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP...	49	8e-06
28	VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP...	49	8e-06
29	VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP...	49	8e-06
30	VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP...	49	8e-06
31	VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP...	49	8e-06
32	VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP...	49	1e-05
33	SYB_LOLPE (P47194) Synaptobrevin	48	2e-05
34	SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated in...	47	3e-05
35	VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP...	47	3e-05
36	VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3...	47	4e-05
37	VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP...	47	4e-05
38	VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP...	47	4e-05
39	VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1...	46	6e-05
40	SYBL_SCHMA (Q27236) Synaptobrevin-like protein	43	4e-04
41	YKT6_DEBHA (Q6BSL0) Synaptobrevin homolog YKT6	41	0.002
42	YKT6_CANGA (Q6FW27) Synaptobrevin homolog YKT6	40	0.003
43	YKT6_YEAST (P36015) Synaptobrevin homolog YKT6	40	0.003
44	YKT6_ASHGO (Q757A4) Synaptobrevin homolog YKT6	40	0.003
45	SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.008
46	SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.008
47	SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 v...	39	0.008
48	YKT6_KLULA (Q6CSA2) Synaptobrevin homolog YKT6	39	0.010
49	YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6	38	0.013
50	YKT6_YARLI (Q6C537) Synaptobrevin homolog YKT6	37	0.023
51	SEC22_YARLI (Q6C880) Protein transport protein SEC22	36	0.051
52	SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22	34	0.19
53	SEC22_KLULA (Q6CJA0) Protein transport protein SEC22	34	0.19
54	SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22	33	0.33
55	VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP...	33	0.43
56	SEC22_CANGA (Q6FWT0) Protein transport protein SEC22	33	0.43
57	SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)	32	0.73
58	RAD52_MAGGR (Q8NK72) DNA repair and recombination protein rhm52 ...	32	0.95
59	MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)	30	2.8
60	LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase...	30	2.8
61	PSA1_DROME (P12881) Proteasome subunit alpha type 1 (EC 3.4.25.1...	30	4.7
62	PPR1_YEAST (P07272) Pyrimidine pathway regulatory protein 1	30	4.7
63	PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2	29	6.2
64	GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensiti...	29	8.1
65	REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing pro...	29	8.1

>VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtVAMP722)|
           (Synaptobrevin-related protein 1)
          Length = 221

 Score =  120 bits (300), Expect = 3e-27
 Identities = 62/86 (72%), Positives = 64/86 (74%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQVSEVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGTQ+RRKMW QNM   
Sbjct: 136 AQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNMKIK 195

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNCGK 245
                          LS+C GFNCGK
Sbjct: 196 LIVLAIIIALILIIILSICGGFNCGK 221

to top

>VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtVAMP721)|
           (v-SNARE synaptobrevin 7B) (AtVAMP7B)
          Length = 219

 Score =  117 bits (292), Expect = 2e-26
 Identities = 61/84 (72%), Positives = 62/84 (73%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQVSEVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR  GTQ+RRKMWLQNM   
Sbjct: 136 AQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNMKIK 195

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNC 251
                          LSVCHGF C
Sbjct: 196 LIVLAIIIALILIIVLSVCHGFKC 219

to top

>VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein 726|
           (AtVAMP726)
          Length = 220

 Score =  111 bits (277), Expect = 1e-24
 Identities = 56/84 (66%), Positives = 62/84 (73%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQV+EVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGT+++RK+W +NM   
Sbjct: 136 AQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENMKIK 195

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNC 251
                          LSVCHGF C
Sbjct: 196 LIVFGIIVALILIIILSVCHGFKC 219

to top

>VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtVAMP725)|
          Length = 285

 Score =  110 bits (275), Expect = 2e-24
 Identities = 57/84 (67%), Positives = 61/84 (72%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQV+EVK VMMENIEKVLDRGEKIELLVDKTENLRSQAQDFR QGT++RRKMW +NM   
Sbjct: 201 AQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENMKIK 260

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNC 251
                          LSVC GF C
Sbjct: 261 LIVLGIIITLILIIILSVCGGFKC 284

to top

>VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (AtVAMP724)|
           (SYBL1-like protein)
          Length = 222

 Score =  103 bits (256), Expect = 3e-22
 Identities = 48/84 (57%), Positives = 61/84 (72%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQVSEVK++M+ENI+K +DRGE + +L DKTENLRSQAQ++++QGTQVRRK+W QNM   
Sbjct: 137 AQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNMKIK 196

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNC 251
                          +SVCHGFNC
Sbjct: 197 LVVLGILLLLVLIIWISVCHGFNC 220

to top

>VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (AtVAMP727)|
          Length = 240

 Score = 94.4 bits (233), Expect = 2e-19
 Identities = 46/84 (54%), Positives = 57/84 (67%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQ++EVK +MM+NIEKVLDRGEKIELLVDKTENL+ QA  F++QG Q+RRKMWLQ++   
Sbjct: 155 AQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSLQMK 214

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNC 251
                          +  C GF C
Sbjct: 215 LMVAGAVFSFILIVWVVACGGFKC 238

to top

>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)|
          Length = 221

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 35/80 (43%), Positives = 49/80 (61%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXXX 320
           ++S+V+NVM+ENI+KVLDRGE++ELLVDKTEN++     FR+Q  + R  MW +N+    
Sbjct: 134 EMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNVKLTI 193

Query: 319 XXXXXXXXXXXXXXLSVCHG 260
                           VCHG
Sbjct: 194 ALILVLALVVYIAMAFVCHG 213

to top

>VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtVAMP723)|
          Length = 217

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 42/86 (48%), Positives = 49/86 (56%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQVSEVK++MMENIEKVL RG   E+L     +  SQ Q F  + TQ++RK W QNM   
Sbjct: 136 AQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNMKIK 191

Query: 322 XXXXXXXXXXXXXXXLSVCHGFNCGK 245
                          LSVC GFNCGK
Sbjct: 192 LIVLAIIIALILIIILSVCGGFNCGK 217

to top

>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)|
          Length = 221

 Score = 67.4 bits (163), Expect = 2e-11
 Identities = 27/55 (49%), Positives = 46/55 (83%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           +VSE+++VM+ENIEK+++RG++IELLVDKT  ++  +  FR+Q  ++RR +W++N
Sbjct: 134 EVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188

to top

>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)|
           (v-SNARE synaptobrevin 7C) (AtVAMP7C)
          Length = 219

 Score = 64.7 bits (156), Expect = 1e-10
 Identities = 30/80 (37%), Positives = 46/80 (57%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXXX 320
           ++++V+ VM+ENI+KVLDRGE++ELLVDKT N++     FR+Q  + R  +W +N     
Sbjct: 133 EMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRNCKLTV 192

Query: 319 XXXXXXXXXXXXXXLSVCHG 260
                           +CHG
Sbjct: 193 LLILLLLVIIYIAVAFLCHG 212

to top

>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)|
          Length = 219

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 27/80 (33%), Positives = 44/80 (55%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXXX 320
           ++++V++VM+ENI+ +LDRGE++ELLVDKT N++     FR+Q  +    +W +N     
Sbjct: 133 EMNQVRDVMIENIDNILDRGERLELLVDKTANMQGNTFRFRKQTRRFNNTVWWRNCKLTL 192

Query: 319 XXXXXXXXXXXXXXLSVCHG 260
                            CHG
Sbjct: 193 LLILVLLVIIYIGVAFACHG 212

to top

>SYB1_SCHPO (Q92356) Synaptobrevin homolog 1|
          Length = 121

 Score = 59.3 bits (142), Expect = 6e-09
 Identities = 26/56 (46%), Positives = 39/56 (69%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           Q+ +   +M ENI KV +RGE+++ L DKT+NL   AQ FR+   +VR+KMW ++M
Sbjct: 38  QIDDTVGIMRENISKVSERGERLDSLQDKTDNLAVSAQGFRRGANRVRKKMWWKDM 93

to top

>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1|
          Length = 219

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQV E+K +M+ NI+ V  RGE++ELL+DKTENL   +  F+     + R M ++N+   
Sbjct: 130 AQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLT 189

Query: 322 XXXXXXXXXXXXXXXLSVCHGF 257
                            +C GF
Sbjct: 190 IIIIIVSIVFIYIIVSPLCGGF 211

to top

>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)|
           (Ti-VAMP) (Ti-VAMP/VAMP7)
          Length = 219

 Score = 56.2 bits (134), Expect = 5e-08
 Identities = 28/82 (34%), Positives = 42/82 (51%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNMXXX 323
           AQV E+K +M+ NI+ V  RGE++ELL+DKTENL   +  F+     + R M ++N+   
Sbjct: 130 AQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLT 189

Query: 322 XXXXXXXXXXXXXXXLSVCHGF 257
                            +C GF
Sbjct: 190 IIIIIVSIVFIYIIVSPLCGGF 211

to top

>VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMW 344
           QV EV +VM ENI KV++RGE+++ L DK+E+L   A  F  +  Q+RR+MW
Sbjct: 59  QVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

to top

>VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 55.8 bits (133), Expect = 6e-08
 Identities = 26/52 (50%), Positives = 37/52 (71%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMW 344
           QV EV +VM ENI KV++RGE+++ L DK+E+L   A  F  +  Q+RR+MW
Sbjct: 59  QVDEVIDVMQENITKVIERGERLDELQDKSESLSDNATAFSNRSKQLRRQMW 110

to top

>VAMP8_PONPY (Q5REQ5) Vesicle-associated membrane protein 8 (VAMP-8)|
          Length = 100

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 23/57 (40%), Positives = 40/57 (70%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           ++V  VKN+M +N+E++L RGE +E L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 18  SEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

to top

>VAMP8_HUMAN (Q9BV40) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 23/57 (40%), Positives = 40/57 (70%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           ++V  VKN+M +N+E++L RGE +E L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 18  SEVEGVKNIMTQNVERILARGENLEHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

to top

>VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (Edb)
          Length = 101

 Score = 54.3 bits (129), Expect = 2e-07
 Identities = 22/57 (38%), Positives = 40/57 (70%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           ++V  VKN+M +N+E++L RGE ++ L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 18  SEVEGVKNIMTQNVERILSRGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 74

to top

>VAMP8_RAT (Q9WUF4) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (EDB)
          Length = 100

 Score = 53.5 bits (127), Expect = 3e-07
 Identities = 22/57 (38%), Positives = 40/57 (70%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           ++V  VKN+M +N+E++L RGE ++ L +KTE+L + ++ F+    +V RK W +N+
Sbjct: 17  SEVEGVKNIMTQNVERILARGENLDHLRNKTEDLEATSEHFKTTSQKVARKFWWKNV 73

to top

>NYV1_YEAST (Q12255) Vacuolar v-SNARE NYV1 (R-SNARE NYV1) (Synaptobrevin NYV1)|
           (New v-SNARE 1)
          Length = 251

 Score = 52.8 bits (125), Expect = 5e-07
 Identities = 22/56 (39%), Positives = 36/56 (64%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           Q+ +V  +M +NI+K L+R E++ LLVDKT  L S +  FR++   ++  MW Q +
Sbjct: 172 QIKDVIQIMNDNIDKFLERQERVSLLVDKTSQLNSSSNKFRRKAVNIKEIMWWQKV 227

to top

>SYB_APLCA (P35589) Synaptobrevin|
          Length = 180

 Score = 52.4 bits (124), Expect = 7e-07
 Identities = 25/56 (44%), Positives = 36/56 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV ++M  N+EKVLDR +KI  L D+ E L++ A  F     +++RK W +N
Sbjct: 27  AQVDEVVDIMRVNVEKVLDRDQKISQLDDRAEALQAGASQFEASAGKLKRKYWWKN 82

to top

>SYB_DROME (P18489) Synaptobrevin|
          Length = 152

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 23/57 (40%), Positives = 35/57 (61%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           A+V EV  +M  N+EKVL+R +K+  L ++ + L   A  F QQ  +++RK W  NM
Sbjct: 53  AKVDEVVGIMRVNVEKVLERDQKLSELGERADQLEQGASQFEQQAGKLKRKQWWANM 109

to top

>SNC1_YEAST (P31109) Synaptobrevin homolog 1|
          Length = 117

 Score = 50.8 bits (120), Expect = 2e-06
 Identities = 20/57 (35%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           A++ +   +M +NI KV +RGE++  + DK +NL   AQ F++   +VR+ MW +++
Sbjct: 34  AEIDDTVGIMRDNINKVAERGERLTSIEDKADNLAVSAQGFKRGANRVRKAMWYKDL 90

to top

>SNC2_YEAST (P33328) Synaptobrevin homolog 2|
          Length = 115

 Score = 49.7 bits (117), Expect = 4e-06
 Identities = 19/56 (33%), Positives = 37/56 (66%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           ++ +   +M +NI KV +RGE++  + DK +NL   AQ F++   +VR++MW +++
Sbjct: 34  EIDDTVGIMRDNINKVAERGERLTSIEDKADNLAISAQGFKRGANRVRKQMWWKDL 89

to top

>VAMP2_RAT (P63045) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 36  AQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

to top

>VAMP2_MOUSE (P63044) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 36  AQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

to top

>VAMP2_MACMU (Q9N0Y0) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 36  AQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

to top

>VAMP2_HUMAN (P63027) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 36  AQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

to top

>VAMP2_BOVIN (P63026) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2)
          Length = 115

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 21/57 (36%), Positives = 37/57 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N+
Sbjct: 36  AQVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKNL 92

to top

>VAMP2_XENLA (P47193) Vesicle-associated membrane protein 2 (VAMP-2)|
           (Synaptobrevin-2) (SYBII)
          Length = 113

 Score = 48.9 bits (115), Expect = 8e-06
 Identities = 22/57 (38%), Positives = 36/57 (63%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           AQV EV ++M  N++KVL+R  K+  L D+ + L++ A  F     +++RK W +NM
Sbjct: 34  AQVDEVVDIMRVNVDKVLERDTKLSELDDRADALQAGASQFETSAAKLKRKYWWKNM 90

to top

>VAMP1_MOUSE (Q62442) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 48.5 bits (114), Expect = 1e-05
 Identities = 21/56 (37%), Positives = 36/56 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 39  AQVEEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 94

to top

>SYB_LOLPE (P47194) Synaptobrevin|
          Length = 125

 Score = 47.8 bits (112), Expect = 2e-05
 Identities = 22/56 (39%), Positives = 35/56 (62%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV ++M  N++KVL+R  KI  L D+ + L++ A  F     +++RK W +N
Sbjct: 46  AQVEEVVDIMRVNVDKVLERDSKISELDDRADALQAGASQFEASAGKLKRKFWWKN 101

to top

>SYB_TORCA (P13701) Synaptobrevin (Synaptic vesicle-associated integral|
           membrane protein) (VAMP-1)
          Length = 120

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 20/56 (35%), Positives = 36/56 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 41  AQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 96

to top

>VAMP1_HUMAN (P23763) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 47.0 bits (110), Expect = 3e-05
 Identities = 20/56 (35%), Positives = 36/56 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 39  AQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASQFESSAAKLKRKYWWKN 94

to top

>VAMP3_RAT (P63025) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 25  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 79

to top

>VAMP3_MOUSE (P63024) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 103

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 25  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 79

to top

>VAMP3_HUMAN (Q15836) Vesicle-associated membrane protein 3 (VAMP-3)|
           (Synaptobrevin-3) (Cellubrevin) (CEB)
          Length = 99

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 20/55 (36%), Positives = 35/55 (63%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           QV EV ++M  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 20  QVDEVVDIMRVNVDKVLERDQKLSELDDRADALQAGASQFETSAAKLKRKYWWKN 74

to top

>VAMP1_RAT (Q63666) Vesicle-associated membrane protein 1 (VAMP-1)|
           (Synaptobrevin-1)
          Length = 118

 Score = 45.8 bits (107), Expect = 6e-05
 Identities = 20/56 (35%), Positives = 36/56 (64%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV EV +++  N++KVL+R +K+  L D+ + L++ A  F     +++RK W +N
Sbjct: 39  AQVEEVVDIIRVNVDKVLERDQKLSELDDRADALQAGASVFESSAAKLKRKYWWKN 94

to top

>SYBL_SCHMA (Q27236) Synaptobrevin-like protein|
          Length = 131

 Score = 43.1 bits (100), Expect = 4e-04
 Identities = 19/56 (33%), Positives = 35/56 (62%)
 Frame = -1

Query: 502 AQVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQN 335
           AQV+EV ++M  N++KVL+R + +  L  + + L++ A  F     +++RK W +N
Sbjct: 24  AQVNEVVDIMRVNVDKVLERDKNLSELDGRADALQAGASQFEASAGKLKRKFWWKN 79

to top

>YKT6_DEBHA (Q6BSL0) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 20/43 (46%), Positives = 30/43 (69%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K V+ + IE VL RGEK++ LVDK+E L S ++ F +Q
Sbjct: 147 ELDETKIVLHKTIESVLQRGEKLDSLVDKSEALSSSSRMFYKQ 189

to top

>YKT6_CANGA (Q6FW27) Synaptobrevin homolog YKT6|
          Length = 205

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 19/43 (44%), Positives = 31/43 (72%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 152 ELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQ 194

to top

>YKT6_YEAST (P36015) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 19/43 (44%), Positives = 31/43 (72%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 147 ELDETKIVLHKTIENVLQRGEKLDNLVDKSESLTASSKMFYKQ 189

to top

>YKT6_ASHGO (Q757A4) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 19/43 (44%), Positives = 31/43 (72%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K V+ + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 147 ELDETKIVLHKTIESVLQRGEKLDNLVDKSESLSASSRMFYKQ 189

to top

>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 374
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

to top

>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 374
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

to top

>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 38.9 bits (89), Expect = 0.008
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQ 374
           ++ +V+ +M+ NIE+VL RGE +  L  K  NL S ++ +RQ
Sbjct: 140 ELQDVQRIMVANIEEVLQRGEALSALDSKANNLSSLSKKYRQ 181

to top

>YKT6_KLULA (Q6CSA2) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 18/43 (41%), Positives = 30/43 (69%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K  + + IE VL RGEK++ LVDK+E+L + ++ F +Q
Sbjct: 147 ELDETKITLHKTIENVLQRGEKLDNLVDKSESLSAASRMFYKQ 189

to top

>YKT6_SCHPO (O60073) Synaptobrevin homolog ykt6|
          Length = 197

 Score = 38.1 bits (87), Expect = 0.013
 Identities = 16/40 (40%), Positives = 30/40 (75%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDF 380
           ++ E K+V+ + IE VL RGEK++ L+ +++NL +Q++ F
Sbjct: 144 ELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMF 183

to top

>YKT6_YARLI (Q6C537) Synaptobrevin homolog YKT6|
          Length = 200

 Score = 37.4 bits (85), Expect = 0.023
 Identities = 18/43 (41%), Positives = 29/43 (67%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQ 371
           ++ E K V+ + IE VL RGE+++ LVDK+E L   ++ F +Q
Sbjct: 147 ELDETKIVLHKTIESVLARGERLDTLVDKSEALSQSSKIFFKQ 189

to top

>SEC22_YARLI (Q6C880) Protein transport protein SEC22|
          Length = 213

 Score = 36.2 bits (82), Expect = 0.051
 Identities = 14/47 (29%), Positives = 31/47 (65%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 359
           ++ +V  VM +NIE +L RG  ++ + D + NLR++++ +R+   ++
Sbjct: 139 ELQDVTRVMTKNIEDLLHRGHSLDHMSDLSSNLRTESKKYRRAAQRI 185

to top

>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 16/55 (29%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVR-RKMWLQ 338
           ++ +V  VM +NIE +L RG+ +E + D + +LR  +  +++   +V    +W Q
Sbjct: 134 ELKDVTRVMTKNIEDLLYRGDSLEKMADLSSDLRYSSAKYKKAARRVNLEALWRQ 188

to top

>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22|
          Length = 214

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 14/43 (32%), Positives = 27/43 (62%)
 Frame = -1

Query: 487 VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 359
           VK +M +NIE +L RG+ ++ + D + +LR  A+ +R    ++
Sbjct: 143 VKQIMTKNIEDLLYRGDSLDKMSDMSASLRQDAKKYRASAQKI 185

to top

>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22|
          Length = 214

 Score = 33.5 bits (75), Expect = 0.33
 Identities = 13/43 (30%), Positives = 28/43 (65%)
 Frame = -1

Query: 487 VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 359
           VK +M +NIE +L RG+ ++ + D + +LR  ++ +R+   ++
Sbjct: 143 VKQIMTKNIEDLLYRGDSLDRMSDLSASLRQDSKKYRRSAQKI 185

to top

>VAMP5_HUMAN (O95183) Vesicle-associated membrane protein 5 (VAMP-5) (Myobrevin)|
          Length = 116

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 16/56 (28%), Positives = 29/56 (51%)
 Frame = -1

Query: 499 QVSEVKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQVRRKMWLQNM 332
           Q +EV  +M  N  KVL+RG K+  L  +++ L   +  F +    + +K   +N+
Sbjct: 12  QANEVTEIMRNNFGKVLERGVKLAELQQRSDQLLDMSSTFNKTTQNLAQKKCWENI 67

to top

>SEC22_CANGA (Q6FWT0) Protein transport protein SEC22|
          Length = 215

 Score = 33.1 bits (74), Expect = 0.43
 Identities = 13/43 (30%), Positives = 28/43 (65%)
 Frame = -1

Query: 487 VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 359
           VK +M +NIE +L RG+ +E + D + +L+  ++ +R+   ++
Sbjct: 144 VKQIMSKNIEDLLYRGDSLEKMDDMSNSLKISSKKYRKSAQKI 186

to top

>SEC22_YEAST (P22214) Protein transport protein SEC22 (Protein SLY2)|
          Length = 214

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 12/43 (27%), Positives = 28/43 (65%)
 Frame = -1

Query: 487 VKNVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRQQGTQV 359
           VK +M +NIE +L RG+ ++ + D + +L+  ++ +R+   ++
Sbjct: 143 VKQIMSKNIEDLLYRGDSLDKMSDMSSSLKETSKRYRKSAQKI 185

to top

>RAD52_MAGGR (Q8NK72) DNA repair and recombination protein rhm52 (RAD52 homolog)|
          Length = 565

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 20/55 (36%), Positives = 29/55 (52%)
 Frame = +2

Query: 35  PSHHPSNDKRTAQHNDDDNGNGPPQAPRPGPAHTREERTLGTIYGFCSNQQSNIG 199
           PS + SN +R  Q +   N NGP   P+P   + +  R+ G   G  +NQQ+N G
Sbjct: 292 PSGNQSNQQRPMQPSSRMNLNGPAGRPQPQTPNHQINRS-GPQNGSINNQQNNHG 345

to top

>MSH6_ARATH (O04716) DNA mismatch repair protein MSH6-1 (AtMsh6-1)|
          Length = 1324

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +2

Query: 35  PSHHPSNDKRTAQHNDDDNGNGPPQAPRPGP 127
           PS  PS  K+T + N + + N P ++P PGP
Sbjct: 59  PSPSPSPPKKTPKLNPNPSSNLPARSPSPGP 89

to top

>LIPB1_HUMAN (Q86W92) Liprin-beta-1 (Protein tyrosine phosphatase receptor type|
           f polypeptide-interacting protein-binding protein 1)
           (PTPRF-interacting protein-binding protein 1) (hSGT2)
          Length = 1011

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 9/66 (13%)
 Frame = +2

Query: 56  DKRTAQHND---------DDNGNGPPQAPRPGPAHTREERTLGTIYGFCSNQQSNIGTVE 208
           +K TA+H D         D   N P Q P P P   ++ R +  ++G     QS     +
Sbjct: 548 EKETAEHLDLAGASSRPKDSQRNSPFQIPPPSPDSKKKSRGIMKLFGKLRRSQSTTFNPD 607

Query: 209 CVSRPQ 226
            +S P+
Sbjct: 608 DMSEPE 613

to top

>PSA1_DROME (P12881) Proteasome subunit alpha type 1 (EC 3.4.25.1) (Proteasome|
           35 kDa subunit) (PROS-Dm35)
          Length = 279

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +2

Query: 53  NDKRTAQHNDDDNGNGPPQAPRPGP 127
           ND  T +++DDD+   PP+ P  GP
Sbjct: 242 NDNDTPRNDDDDDRPSPPEEPAAGP 266

to top

>PPR1_YEAST (P07272) Pyrimidine pathway regulatory protein 1|
          Length = 904

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/60 (25%), Positives = 27/60 (45%)
 Frame = +3

Query: 207 NVSHDLRVCPHLDLPQLNPWHTDRIMMRMSATMMPRTISLIFMFCSHIFLLTCVPCCLKS 386
           NV+  + VC  +D+P  + W T + +       +P    + + F + IF +      LKS
Sbjct: 353 NVTEKIDVCSSVDVPWYDTWETSQKVNMRPIVELPTKFHIPYFFLNIIFAIGHATQVLKS 412

to top

>PO6F2_MOUSE (Q8BJI4) POU domain, class 6, transcription factor 2|
          Length = 691

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/34 (35%), Positives = 16/34 (47%)
 Frame = +2

Query: 35  PSHHPSNDKRTAQHNDDDNGNGPPQAPRPGPAHT 136
           P  HP N  +  Q +     + PPQ P P P H+
Sbjct: 251 PHSHPQNQTQN-QPSPTQQSSSPPQKPSPSPGHS 283

to top

>GAI_ARATH (Q9LQT8) DELLA protein GAI (Gibberellic acid-insensitive mutant|
           protein) (Restoration of growth on ammonia protein 2)
          Length = 533

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 41  HHPSNDKRTAQHNDDDNGNG 100
           HH   DK+T   N++D+GNG
Sbjct: 7   HHHHQDKKTMMMNEEDDGNG 26

to top

>REPS1_HUMAN (Q96D71) RalBP1-associated Eps domain-containing protein 1|
           (RalBP1-interacting protein 1)
          Length = 744

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
 Frame = +2

Query: 35  PSHHPSNDKRTAQHN--DDDNGNGPPQAPRPGPAHTR 139
           P    SN  R   H+    DN   PP  PRP P+H+R
Sbjct: 471 PEQIGSNVTRQRSHSGTSPDNTAPPPPPPRPQPSHSR 507


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,047,656
Number of Sequences: 219361
Number of extensions: 1149771
Number of successful extensions: 4648
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 4275
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4622
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result