Clone Name	rbasd11m20
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	ref|XM_506167.1| PREDICTED Oryza sativa (japonica cultivar-group...	450	e-123
2	ref|XM_476682.1| Oryza sativa (japonica cultivar-group), mRNA	450	e-123
3	dbj|AK103591.1| Oryza sativa (japonica cultivar-group) cDNA clon...	450	e-123
4	dbj|AK103532.1| Oryza sativa (japonica cultivar-group) cDNA clon...	450	e-123
5	gb|AY103731.1| Zea mays PCO061870 mRNA sequence	355	1e-94
6	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	198	2e-47
7	dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic D...	198	2e-47
8	dbj|AK067778.1| Oryza sativa (japonica cultivar-group) cDNA clon...	88	4e-14
9	dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D...	86	2e-13
10	dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic D...	86	2e-13
11	ref|NM_115099.3| Arabidopsis thaliana deoxyribonuclease AT3G5239...	72	2e-09
12	ref|NM_202689.1| Arabidopsis thaliana deoxyribonuclease AT3G5239...	72	2e-09
13	emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, B...	72	2e-09
14	emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BA...	72	2e-09
15	gb|BT005884.1| Arabidopsis thaliana At3g52390 gene, complete cds	72	2e-09
16	gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Ph...	46	0.14
17	gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete se...	46	0.14
18	emb|CR628337.1| Legionella pneumophila str. Lens complete genome	46	0.14
19	gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, com...	44	0.54
20	emb|AL031584.2|HS1158E12 Human DNA sequence from clone RP5-1158E...	44	0.54
21	emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chr...	44	0.54
22	emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chr...	42	2.1
23	gb|AC084371.5| Homo sapiens BAC clone CTD-3220I23 from 2, comple...	42	2.1
24	gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, com...	40	8.4
25	gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, comp...	40	8.4
26	gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Canc...	40	8.4
27	gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, compl...	40	8.4
28	emb|Z81122.1|CET13F2 Caenorhabditis elegans Cosmid T13F2, comple...	40	8.4
29	ref|XM_648330.1| Entamoeba histolytica HM-1:IMSS hypothetical pr...	40	8.4
30	gb|AC104700.4| Homo sapiens BAC clone RP11-712I20 from 7, comple...	40	8.4
31	gb|AC006356.3| Homo sapiens PAC clone RP5-1111L2 from 7, complet...	40	8.4
32	gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, com...	40	8.4
33	gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete s...	40	8.4
34	emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P1...	40	8.4
35	emb|CR628336.1| Legionella pneumophila str. Paris complete genome	40	8.4
36	emb|BX088713.8| Zebrafish DNA sequence from clone DKEY-1P9 in li...	40	8.4
37	gb|BC056924.1| Mus musculus microcephaly, primary autosomal rece...	40	8.4
38	emb|BX649308.13| Zebrafish DNA sequence from clone CH211-223K15 ...	40	8.4
39	gb|DQ283367.1| Scotobleps gabonicus 12S ribosomal RNA gene, part...	40	8.4
40	gb|AC096541.2| Homo sapiens chromosome 1 clone RP11-330M19, comp...	40	8.4
41	gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete s...	40	8.4
42	emb|BX000477.13| Zebrafish DNA sequence from clone CH211-59D8 in...	40	8.4
43	gb|AC008380.9| Homo sapiens chromosome 5 clone CTC-215P6, comple...	40	8.4
44	gb|AC008503.6| Homo sapiens chromosome 5 clone CTC-442P24, compl...	40	8.4
45	dbj|AK017405.1| Mus musculus 6 days neonate head cDNA, RIKEN ful...	40	8.4
46	gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Hu...	40	8.4
47	gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosom...	40	8.4
48	gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromos...	40	8.4
49	gb|AC025030.14|AC025030 Homo sapiens 12 BAC RP11-46I1 (Roswell P...	40	8.4
50	gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum)...	40	8.4
51	dbj|AK174232.1| Ciona intestinalis cDNA, clone:cicl002h05, full ...	40	8.4
52	emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in...	40	8.4
53	dbj|D31714.1|ATHCP33E Arabidopsis thaliana gene for chloroplast ...	40	8.4
54	dbj|AK130586.1| Homo sapiens cDNA FLJ27076 fis, clone SPL02374, ...	40	8.4
55	emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in ...	40	8.4
56	gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Canc...	40	8.4
57	emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chr...	40	8.4
58	emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-3...	40	8.4
59	gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, co...	40	8.4
60	emb|AJ556716.1|HSA556716 Homo sapiens partial mRNA for immunoglo...	40	8.4
61	ref|NM_173189.2| Mus musculus microcephaly, primary autosomal re...	40	8.4
62	emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, co...	40	8.4
63	gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone...	40	8.4
64	gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cance...	40	8.4
65	emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chro...	40	8.4
66	emb|AJ519335.1|HSA519335 Homo sapiens partial mRNA for IgM immun...	40	8.4
67	dbj|AB073334.1| Cyprinus carpio mRNA for immunoglobulin light ch...	40	8.4
68	dbj|AB073333.1| Cyprinus carpio mRNA for immunoglobulin light ch...	40	8.4
69	dbj|AB073332.1| Cyprinus carpio mRNA for immunoglobulin light ch...	40	8.4
70	emb|AL591165.17| Mouse DNA sequence from clone RP23-336D20 on ch...	40	8.4

---

>ref|XM_506167.1| PREDICTED Oryza sativa (japonica cultivar-group), P0455F03.23 mRNA
          Length = 1205

 Score =  450 bits (227), Expect = e-123
 Identities = 431/499 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
            |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 1047 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 988

                                                                        
Query: 178  atgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgcatccag 237
            | ||||||||||| ||||||||||||||||| || || || ||||| |||||||||||||
Sbjct: 987  acgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgcatccag 928

                                                                        
Query: 238  ccactacctcaaggacttgccttactaaacaaggctcattgcgacccttaactgttatac 297
            | || |||||||| |||||||| ||||| || |||||||||||||| || |||||   | 
Sbjct: 927  ctacaacctcaagaacttgcctgactaagcagggctcattgcgaccttttactgtagaat 868

                                                                        
Query: 298  caggttcgtacttctctttcttcttggatggccagatcgactttacaaactggattccag 357
            | || |||||||| ||||||||||||||||||||||  ||||| || |||| ||||||||
Sbjct: 867  ccggctcgtacttttctttcttcttggatggccagacagacttcacgaacttgattccag 808

                                                                        
Query: 358  catgagtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcag 417
            |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 807  catgagtatttttaatatcacagtatggagagtctgtctctatcatcatcctctctgcag 748

                                                                        
Query: 418  gaatgcctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaataccta 477
            |||| ||| ||| || ||| ||||||||| ||||||||| |||||| || ||||||||||
Sbjct: 747  gaataccttgtagaacctcaagattttcactagtcttcagagagcatccattaataccta 688

                                                                        
Query: 478  taaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaaggaat 537
            ||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||||| |
Sbjct: 687  taaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaaggagt 628

                                                                        
Query: 538  gtgtaaccccacctgggaacctgtacagattttgcgataacatttcagagaagtcttcac 597
            ||||||| || || ||||| || ||||||||||  || |  || ||| ||||||||||||
Sbjct: 627  gtgtaacacccccagggaatctatacagattttctgacacaatctcacagaagtcttcac 568

                               
Query: 598  cagcagcacgcatgtgaag 616
            ||||||| |||||||||||
Sbjct: 567  cagcagcccgcatgtgaag 549

---

>ref|XM_476682.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1205

 Score =  450 bits (227), Expect = e-123
 Identities = 431/499 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
            |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 1047 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 988

                                                                        
Query: 178  atgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgcatccag 237
            | ||||||||||| ||||||||||||||||| || || || ||||| |||||||||||||
Sbjct: 987  acgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgcatccag 928

                                                                        
Query: 238  ccactacctcaaggacttgccttactaaacaaggctcattgcgacccttaactgttatac 297
            | || |||||||| |||||||| ||||| || |||||||||||||| || |||||   | 
Sbjct: 927  ctacaacctcaagaacttgcctgactaagcagggctcattgcgaccttttactgtagaat 868

                                                                        
Query: 298  caggttcgtacttctctttcttcttggatggccagatcgactttacaaactggattccag 357
            | || |||||||| ||||||||||||||||||||||  ||||| || |||| ||||||||
Sbjct: 867  ccggctcgtacttttctttcttcttggatggccagacagacttcacgaacttgattccag 808

                                                                        
Query: 358  catgagtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcag 417
            |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 807  catgagtatttttaatatcacagtatggagagtctgtctctatcatcatcctctctgcag 748

                                                                        
Query: 418  gaatgcctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaataccta 477
            |||| ||| ||| || ||| ||||||||| ||||||||| |||||| || ||||||||||
Sbjct: 747  gaataccttgtagaacctcaagattttcactagtcttcagagagcatccattaataccta 688

                                                                        
Query: 478  taaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaaggaat 537
            ||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||||| |
Sbjct: 687  taaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaaggagt 628

                                                                        
Query: 538  gtgtaaccccacctgggaacctgtacagattttgcgataacatttcagagaagtcttcac 597
            ||||||| || || ||||| || ||||||||||  || |  || ||| ||||||||||||
Sbjct: 627  gtgtaacacccccagggaatctatacagattttctgacacaatctcacagaagtcttcac 568

                               
Query: 598  cagcagcacgcatgtgaag 616
            ||||||| |||||||||||
Sbjct: 567  cagcagcccgcatgtgaag 549

---

>dbj|AK103591.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033133D05, full
            insert sequence
          Length = 1203

 Score =  450 bits (227), Expect = e-123
 Identities = 431/499 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
            |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 1044 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 985

                                                                        
Query: 178  atgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgcatccag 237
            | ||||||||||| ||||||||||||||||| || || || ||||| |||||||||||||
Sbjct: 984  acgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgcatccag 925

                                                                        
Query: 238  ccactacctcaaggacttgccttactaaacaaggctcattgcgacccttaactgttatac 297
            | || |||||||| |||||||| ||||| || |||||||||||||| || |||||   | 
Sbjct: 924  ctacaacctcaagaacttgcctgactaagcagggctcattgcgaccttttactgtagaat 865

                                                                        
Query: 298  caggttcgtacttctctttcttcttggatggccagatcgactttacaaactggattccag 357
            | || |||||||| ||||||||||||||||||||||  ||||| || |||| ||||||||
Sbjct: 864  ccggctcgtacttttctttcttcttggatggccagacagacttcacgaacttgattccag 805

                                                                        
Query: 358  catgagtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcag 417
            |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 804  catgagtatttttaatatcacagtatggagagtctgtctctatcatcatcctctctgcag 745

                                                                        
Query: 418  gaatgcctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaataccta 477
            |||| ||| ||| || ||| ||||||||| ||||||||| |||||| || ||||||||||
Sbjct: 744  gaataccttgtagaacctcaagattttcactagtcttcagagagcatccattaataccta 685

                                                                        
Query: 478  taaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaaggaat 537
            ||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||||| |
Sbjct: 684  taaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaaggagt 625

                                                                        
Query: 538  gtgtaaccccacctgggaacctgtacagattttgcgataacatttcagagaagtcttcac 597
            ||||||| || || ||||| || ||||||||||  || |  || ||| ||||||||||||
Sbjct: 624  gtgtaacacccccagggaatctatacagattttctgacacaatctcacagaagtcttcac 565

                               
Query: 598  cagcagcacgcatgtgaag 616
            ||||||| |||||||||||
Sbjct: 564  cagcagcccgcatgtgaag 546

---

>dbj|AK103532.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132A09, full
            insert sequence
          Length = 1203

 Score =  450 bits (227), Expect = e-123
 Identities = 431/499 (86%)
 Strand = Plus / Minus

                                                                        
Query: 118  caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
            |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 1044 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 985

                                                                        
Query: 178  atgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgcatccag 237
            | ||||||||||| ||||||||||||||||| || || || ||||| |||||||||||||
Sbjct: 984  acgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgcatccag 925

                                                                        
Query: 238  ccactacctcaaggacttgccttactaaacaaggctcattgcgacccttaactgttatac 297
            | || |||||||| |||||||| ||||| || |||||||||||||| || |||||   | 
Sbjct: 924  ctacaacctcaagaacttgcctgactaagcagggctcattgcgaccttttactgtagaat 865

                                                                        
Query: 298  caggttcgtacttctctttcttcttggatggccagatcgactttacaaactggattccag 357
            | || |||||||| ||||||||||||||||||||||  ||||| || |||| ||||||||
Sbjct: 864  ccggctcgtacttttctttcttcttggatggccagacagacttcacgaacttgattccag 805

                                                                        
Query: 358  catgagtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcag 417
            |||||||||||||||| ||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 804  catgagtatttttaatatcacagtatggagagtctgtctctatcatcatcctctctgcag 745

                                                                        
Query: 418  gaatgcctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaataccta 477
            |||| ||| ||| || ||| ||||||||| ||||||||| |||||| || ||||||||||
Sbjct: 744  gaataccttgtagaacctcaagattttcactagtcttcagagagcatccattaataccta 685

                                                                        
Query: 478  taaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaaggaat 537
            ||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||||| |
Sbjct: 684  taaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaaggagt 625

                                                                        
Query: 538  gtgtaaccccacctgggaacctgtacagattttgcgataacatttcagagaagtcttcac 597
            ||||||| || || ||||| || ||||||||||  || |  || ||| ||||||||||||
Sbjct: 624  gtgtaacacccccagggaatctatacagattttctgacacaatctcacagaagtcttcac 565

                               
Query: 598  cagcagcacgcatgtgaag 616
            ||||||| |||||||||||
Sbjct: 564  cagcagcccgcatgtgaag 546

---

>gb|AY103731.1| Zea mays PCO061870 mRNA sequence
          Length = 1103

 Score =  355 bits (179), Expect = 1e-94
 Identities = 388/458 (84%)
 Strand = Plus / Minus

                                                                       
Query: 159 tgagggaagaagagcctgcatgtgttgtggtaaagagttttacttaagccctctatatcg 218
           ||||| |||||||||||||||||||||||||| |||||| |||| | ||| ||||| || 
Sbjct: 922 tgaggaaagaagagcctgcatgtgttgtggtacagagttctactcaggccttctatgtca 863

                                                                       
Query: 219 gcaatacctttgcatccagccactacctcaaggacttgccttactaaacaaggctcattg 278
           | ||| ||||||| |||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 862 gaaattcctttgcttccagccactacctcaagnacttgcctgactaaacaaggctcattg 803

                                                                       
Query: 279 cgacccttaactgttataccaggttcgtacttctctttcttcttggatggccagatcgac 338
           ||||| || ||||||  | | || || ||||| ||||||||||| ||||||||||  || 
Sbjct: 802 cgaccttttactgttgaatctggctcatacttttctttcttcttagatggccagacagat 743

                                                                       
Query: 339 tttacaaactggattccagcatgagtatttttaatgtcacaataaggagaatctgtctct 398
           |||||| ||||| ||||||||||||||||| | ||||||||||| ||||||||||| |||
Sbjct: 742 tttacatactggcttccagcatgagtatttcttatgtcacaatatggagaatctgtttct 683

                                                                       
Query: 399 atcatcatcctctctgcaggaatgcctcgtacaatctctagattttcaatagtcttcaaa 458
           ||||||| ||||||  ||||||||||||||| || ||| ||||||||  |||| |||| |
Sbjct: 682 atcatcaacctctcgacaggaatgcctcgtagaacctcaagattttcgttagttttcaga 623

                                                                       
Query: 459 gagcagccgttaatacctataaacatattctcgatagaaagaagcttctcacgttcttct 518
           ||||| || |||| |||||||||||| ||||| | |||||| ||| | || || ||||||
Sbjct: 622 gagcaaccattaacacctataaacatcttctcaaaagaaagtagcatgtcccgatcttct 563

                                                                       
Query: 519 gcagtaccagtgaaggaatgtgtaaccccacctgggaacctgtacagattttgcgataac 578
           || |   |||| |||||||||||||||||||| ||||| |||| || |||  | |  |  
Sbjct: 562 gctgagtcagtaaaggaatgtgtaaccccaccagggaatctgtgcaaattccgtgtcatg 503

                                                 
Query: 579 atttcagagaagtcttcaccagcagcacgcatgtgaag 616
           |||||| |||||||||||||||||||||||||||||||
Sbjct: 502 atttcacagaagtcttcaccagcagcacgcatgtgaag 465

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score =  198 bits (100), Expect = 2e-47
 Identities = 187/216 (86%)
 Strand = Plus / Minus

                                                                           
Query: 261     actaaacaaggctcattgcgacccttaactgttataccaggttcgtacttctctttcttc 320
               ||||| || |||||||||||||| || |||||   | | || |||||||| |||||||||
Sbjct: 3153702 actaagcagggctcattgcgaccttttactgtagaatccggctcgtacttttctttcttc 3153643

                                                                           
Query: 321     ttggatggccagatcgactttacaaactggattccagcatgagtatttttaatgtcacaa 380
               |||||||||||||  ||||| || |||| |||||||||||||||||||||||| ||||| 
Sbjct: 3153642 ttggatggccagacagacttcacgaacttgattccagcatgagtatttttaatatcacag 3153583

                                                                           
Query: 381     taaggagaatctgtctctatcatcatcctctctgcaggaatgcctcgtacaatctctaga 440
               || ||||| |||||||||||||||||||||||||||||||| ||| ||| || ||| |||
Sbjct: 3153582 tatggagagtctgtctctatcatcatcctctctgcaggaataccttgtagaacctcaaga 3153523

                                                   
Query: 441     ttttcaatagtcttcaaagagcagccgttaatacct 476
               |||||| ||||||||| |||||| || |||||||||
Sbjct: 3153522 ttttcactagtcttcagagagcatccattaatacct 3153487



 Score =  174 bits (88), Expect = 2e-40
 Identities = 151/172 (87%)
 Strand = Plus / Minus

                                                                           
Query: 303     tcgtacttctctttcttcttggatggccagatcgactttacaaactggattccagcatga 362
               |||||||| ||||||||||||||||||||||  |||||||| | || |||||||||||||
Sbjct: 3146337 tcgtacttttctttcttcttggatggccagacagactttacgagcttgattccagcatga 3146278

                                                                           
Query: 363     gtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcaggaatg 422
               ||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||| 
Sbjct: 3146277 gtatttttaatatcacagtatggagagtctgtctctatcatcattctctctgcaggaata 3146218

                                                                   
Query: 423     cctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaatac 474
               ||| ||| || ||| | ||||||| ||||||||| |||||| || |||||||
Sbjct: 3146217 ccttgtagaacctcgaaattttcactagtcttcagagagcatccattaatac 3146166



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                           
Query: 173     cctgcatgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgca 232
               |||||| ||||||||||| ||||||||||||||||| || || || ||||| ||||||||
Sbjct: 3154253 cctgcacgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgca 3154194

                                          
Query: 233     tccagccactacctcaaggacttgcct 259
               |||||| || |||||||| ||||||||
Sbjct: 3154193 tccagctacaacctcaagaacttgcct 3154167



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                           
Query: 118     caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
               |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 3154478 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 3154419

                
Query: 178     a 178
               |
Sbjct: 3154418 a 3154418



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                           
Query: 473     acctataaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaa 532
               |||||||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 3153233 acctataaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaa 3153174

                           
Query: 533     ggaatgtgtaac 544
               ||| ||||||||
Sbjct: 3153173 ggagtgtgtaac 3153162



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                           
Query: 473     acctataaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaa 532
               |||||||||||| || || |  ||||||||||| ||||| || |||| ||| ||||||||
Sbjct: 3145906 acctataaacatcttttcaaaggaaagaagcttatcacggtcctctgaagttccagtgaa 3145847

                           
Query: 533     ggaatgtgtaac 544
               ||| ||||||||
Sbjct: 3145846 ggagtgtgtaac 3145835



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                              
Query: 586     agaagtcttcaccagcagcacgcatgtgaag 616
               ||||||||||||||||||| |||||||||||
Sbjct: 3152909 agaagtcttcaccagcagcccgcatgtgaag 3152879



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                              
Query: 586     agaagtcttcaccagcagcacgcatgtgaag 616
               ||||||||||||||||||| | |||||||||
Sbjct: 3145561 agaagtcttcaccagcagccctcatgtgaag 3145531

---

>dbj|AP005454.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0455F03
          Length = 158201

 Score =  198 bits (100), Expect = 2e-47
 Identities = 187/216 (86%)
 Strand = Plus / Minus

                                                                         
Query: 261   actaaacaaggctcattgcgacccttaactgttataccaggttcgtacttctctttcttc 320
             ||||| || |||||||||||||| || |||||   | | || |||||||| |||||||||
Sbjct: 68692 actaagcagggctcattgcgaccttttactgtagaatccggctcgtacttttctttcttc 68633

                                                                         
Query: 321   ttggatggccagatcgactttacaaactggattccagcatgagtatttttaatgtcacaa 380
             |||||||||||||  ||||| || |||| |||||||||||||||||||||||| ||||| 
Sbjct: 68632 ttggatggccagacagacttcacgaacttgattccagcatgagtatttttaatatcacag 68573

                                                                         
Query: 381   taaggagaatctgtctctatcatcatcctctctgcaggaatgcctcgtacaatctctaga 440
             || ||||| |||||||||||||||||||||||||||||||| ||| ||| || ||| |||
Sbjct: 68572 tatggagagtctgtctctatcatcatcctctctgcaggaataccttgtagaacctcaaga 68513

                                                 
Query: 441   ttttcaatagtcttcaaagagcagccgttaatacct 476
             |||||| ||||||||| |||||| || |||||||||
Sbjct: 68512 ttttcactagtcttcagagagcatccattaatacct 68477



 Score =  174 bits (88), Expect = 2e-40
 Identities = 151/172 (87%)
 Strand = Plus / Minus

                                                                         
Query: 303   tcgtacttctctttcttcttggatggccagatcgactttacaaactggattccagcatga 362
             |||||||| ||||||||||||||||||||||  |||||||| | || |||||||||||||
Sbjct: 61327 tcgtacttttctttcttcttggatggccagacagactttacgagcttgattccagcatga 61268

                                                                         
Query: 363   gtatttttaatgtcacaataaggagaatctgtctctatcatcatcctctctgcaggaatg 422
             ||||||||||| ||||| || ||||| ||||||||||||||||| |||||||||||||| 
Sbjct: 61267 gtatttttaatatcacagtatggagagtctgtctctatcatcattctctctgcaggaata 61208

                                                                 
Query: 423   cctcgtacaatctctagattttcaatagtcttcaaagagcagccgttaatac 474
             ||| ||| || ||| | ||||||| ||||||||| |||||| || |||||||
Sbjct: 61207 ccttgtagaacctcgaaattttcactagtcttcagagagcatccattaatac 61156



 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 77/87 (88%)
 Strand = Plus / Minus

                                                                         
Query: 173   cctgcatgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgca 232
             |||||| ||||||||||| ||||||||||||||||| || || || ||||| ||||||||
Sbjct: 69243 cctgcacgtgttgtggtacagagttttacttaagccttcaatgtcagcaattcctttgca 69184

                                        
Query: 233   tccagccactacctcaaggacttgcct 259
             |||||| || |||||||| ||||||||
Sbjct: 69183 tccagctacaacctcaagaacttgcct 69157



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Minus

                                                                         
Query: 118   caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
             |||||||||||||||||||||| |||||| |||| | ||| |||||||||||||||||||
Sbjct: 69468 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagagcctgc 69409

              
Query: 178   a 178
             |
Sbjct: 69408 a 69408



 Score = 63.9 bits (32), Expect = 6e-07
 Identities = 62/72 (86%)
 Strand = Plus / Minus

                                                                         
Query: 473   acctataaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaa 532
             |||||||||||| || || |  ||||||||||| ||||| || |||||||| ||||||||
Sbjct: 68223 acctataaacatcttttcaaaggaaagaagcttatcacggtcctctgcagttccagtgaa 68164

                         
Query: 533   ggaatgtgtaac 544
             ||| ||||||||
Sbjct: 68163 ggagtgtgtaac 68152



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 473   acctataaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaa 532
             |||||||||||| || || |  ||||||||||| ||||| || |||| ||| ||||||||
Sbjct: 60896 acctataaacatcttttcaaaggaaagaagcttatcacggtcctctgaagttccagtgaa 60837

                         
Query: 533   ggaatgtgtaac 544
             ||| ||||||||
Sbjct: 60836 ggagtgtgtaac 60825



 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 30/31 (96%)
 Strand = Plus / Minus

                                            
Query: 586   agaagtcttcaccagcagcacgcatgtgaag 616
             ||||||||||||||||||| |||||||||||
Sbjct: 67899 agaagtcttcaccagcagcccgcatgtgaag 67869



 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 586   agaagtcttcaccagcagcacgcatgtgaag 616
             ||||||||||||||||||| | |||||||||
Sbjct: 60551 agaagtcttcaccagcagccctcatgtgaag 60521

---

>dbj|AK067778.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013114E17, full
           insert sequence
          Length = 979

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 119/144 (82%)
 Strand = Plus / Minus

                                                                       
Query: 473 acctataaacatattctcgatagaaagaagcttctcacgttcttctgcagtaccagtgaa 532
           |||||||||||| || || |  ||||||||||| ||||| || |||| ||| ||||||||
Sbjct: 772 acctataaacatcttttcaaaggaaagaagcttatcacggtcctctgaagttccagtgaa 713

                                                                       
Query: 533 ggaatgtgtaaccccacctgggaacctgtacagattttgcgataacatttcagagaagtc 592
           ||| |||||||| || || ||||| || | ||||||||  ||||  || ||| |||||||
Sbjct: 712 ggagtgtgtaacaccgccagggaatctatgcagattttctgatacaatctcacagaagtc 653

                                   
Query: 593 ttcaccagcagcacgcatgtgaag 616
           |||||||||||| | |||||||||
Sbjct: 652 ttcaccagcagccctcatgtgaag 629

---

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                           
Query: 173     cctgcatgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgca 232
               |||||| ||||||||||| ||||||||||||||||| || || || | ||| ||||||||
Sbjct: 3835749 cctgcacgtgttgtggtacagagttttacttaagccttcaatgtcagaaattcctttgca 3835690

                                          
Query: 233     tccagccactacctcaaggacttgcct 259
               |||||| || |||||||| ||||||||
Sbjct: 3835689 tccagctacaacctcaagaacttgcct 3835663



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                           
Query: 118     caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
               |||||||||||||||||||||| |||||| |||| | ||| ||||||||||||| |||||
Sbjct: 3835982 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagaacctgc 3835923

                
Query: 178     a 178
               |
Sbjct: 3835922 a 3835922



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                           
Query: 495     gaaagaagcttctcacgttcttctgcagtaccagtgaaggaatgtgtaaccccacctggg 554
               ||||||||||| ||||| || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 3834967 gaaagaagcttatcacggtcctctgcagttccagtgaaggagtgtgtaacaccaccaggg 3834908

                 
Query: 555     aa 556
               ||
Sbjct: 3834907 aa 3834906

---

>dbj|AP005605.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OJ1449_C01
          Length = 192857

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Minus

                                                                          
Query: 173    cctgcatgtgttgtggtaaagagttttacttaagccctctatatcggcaatacctttgca 232
              |||||| ||||||||||| ||||||||||||||||| || || || | ||| ||||||||
Sbjct: 100966 cctgcacgtgttgtggtacagagttttacttaagccttcaatgtcagaaattcctttgca 100907

                                         
Query: 233    tccagccactacctcaaggacttgcct 259
              |||||| || |||||||| ||||||||
Sbjct: 100906 tccagctacaacctcaagaacttgcct 100880



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 55/61 (90%)
 Strand = Plus / Minus

                                                                          
Query: 118    caccactctcaagctgtgcatctgcagaaacatctatgtcatgagggaagaagagcctgc 177
              |||||||||||||||||||||| |||||| |||| | ||| ||||||||||||| |||||
Sbjct: 101199 caccactctcaagctgtgcatcagcagaagcatccaggtcctgagggaagaagaacctgc 101140

               
Query: 178    a 178
              |
Sbjct: 101139 a 101139



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 55/62 (88%)
 Strand = Plus / Minus

                                                                          
Query: 495    gaaagaagcttctcacgttcttctgcagtaccagtgaaggaatgtgtaaccccacctggg 554
              ||||||||||| ||||| || |||||||| ||||||||||| |||||||| ||||| |||
Sbjct: 100184 gaaagaagcttatcacggtcctctgcagttccagtgaaggagtgtgtaacaccaccaggg 100125

                
Query: 555    aa 556
              ||
Sbjct: 100124 aa 100123

---

>ref|NM_115099.3| Arabidopsis thaliana deoxyribonuclease AT3G52390 transcript variant
           AT3G52390.1 mRNA, complete cds
          Length = 1354

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                       
Query: 306 tacttctctttcttcttggatggccagatcgactttacaaactggattccagcatgagta 365
           ||||||||||| |||||||| |||||  ||||||||||||||| |||||| || || || 
Sbjct: 761 tacttctcttttttcttggaaggccaagtcgactttacaaacttgattccggcgtgtgtg 702

                                                           
Query: 366 tttttaatgtcacaataaggagaatctgtctctatcatcatcctctct 413
           || || || |||||||| ||||| || || || |||||||| ||||||
Sbjct: 701 ttcttgatatcacaatatggagagtcggtttcgatcatcattctctct 654



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 225 cctttgcatccagccactacctcaaggacttgccttactaaacaaggctcatt 277
           |||||| | |||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 842 cctttgtagccagccaccacttcaaggacttgcctgactaaacaaggctcatt 790



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 135 gcatctgcagaaacatctatgtcatgagggaagaagagcctgcatgtgttgtggta 190
           |||||||||| |  ||||| ||| ||||||||||||| |||||| |||||||||||
Sbjct: 932 gcatctgcagcagaatctaagtcctgagggaagaagaccctgcaagtgttgtggta 877

---

>ref|NM_202689.1| Arabidopsis thaliana deoxyribonuclease AT3G52390 transcript variant
           AT3G52390.2 mRNA, complete cds
          Length = 1363

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                       
Query: 306 tacttctctttcttcttggatggccagatcgactttacaaactggattccagcatgagta 365
           ||||||||||| |||||||| |||||  ||||||||||||||| |||||| || || || 
Sbjct: 770 tacttctcttttttcttggaaggccaagtcgactttacaaacttgattccggcgtgtgtg 711

                                                           
Query: 366 tttttaatgtcacaataaggagaatctgtctctatcatcatcctctct 413
           || || || |||||||| ||||| || || || |||||||| ||||||
Sbjct: 710 ttcttgatatcacaatatggagagtcggtttcgatcatcattctctct 663



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 225 cctttgcatccagccactacctcaaggacttgccttactaaacaaggctcatt 277
           |||||| | |||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 851 cctttgtagccagccaccacttcaaggacttgcctgactaaacaaggctcatt 799



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 135 gcatctgcagaaacatctatgtcatgagggaagaagagcctgcatgtgttgtggta 190
           |||||||||| |  ||||| ||| ||||||||||||| |||||| |||||||||||
Sbjct: 941 gcatctgcagcagaatctaagtcctgagggaagaagaccctgcaagtgttgtggta 886

---

>emb|AL132972.1|ATT25B15 Arabidopsis thaliana DNA chromosome 3, BAC clone T25B15
          Length = 77350

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                         
Query: 306   tacttctctttcttcttggatggccagatcgactttacaaactggattccagcatgagta 365
             ||||||||||| |||||||| |||||  ||||||||||||||| |||||| || || || 
Sbjct: 77009 tacttctcttttttcttggaaggccaagtcgactttacaaacttgattccggcgtgtgtg 77068

                                                             
Query: 366   tttttaatgtcacaataaggagaatctgtctctatcatcatcctctct 413
             || || || |||||||| ||||| || || || |||||||| ||||||
Sbjct: 77069 ttcttgatatcacaatatggagagtcggtttcgatcatcattctctct 77116



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                         
Query: 135   gcatctgcagaaacatctatgtcatgagggaagaagagcctgca 178
             |||||||||| |  ||||| ||| ||||||||||||| ||||||
Sbjct: 76647 gcatctgcagcagaatctaagtcctgagggaagaagaccctgca 76690

---

>emb|AL050300.2|ATF22O6 Arabidopsis thaliana DNA chromosome 3, BAC clone F22O6
          Length = 93443

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Plus

                                                                        
Query: 306  tacttctctttcttcttggatggccagatcgactttacaaactggattccagcatgagta 365
            ||||||||||| |||||||| |||||  ||||||||||||||| |||||| || || || 
Sbjct: 5695 tacttctcttttttcttggaaggccaagtcgactttacaaacttgattccggcgtgtgtg 5754

                                                            
Query: 366  tttttaatgtcacaataaggagaatctgtctctatcatcatcctctct 413
            || || || |||||||| ||||| || || || |||||||| ||||||
Sbjct: 5755 ttcttgatatcacaatatggagagtcggtttcgatcatcattctctct 5802



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 135  gcatctgcagaaacatctatgtcatgagggaagaagagcctgca 178
            |||||||||| |  ||||| ||| ||||||||||||| ||||||
Sbjct: 5333 gcatctgcagcagaatctaagtcctgagggaagaagaccctgca 5376

---

>gb|BT005884.1| Arabidopsis thaliana At3g52390 gene, complete cds
          Length = 963

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 90/108 (83%)
 Strand = Plus / Minus

                                                                       
Query: 306 tacttctctttcttcttggatggccagatcgactttacaaactggattccagcatgagta 365
           ||||||||||| |||||||| |||||  ||||||||||||||| |||||| || || || 
Sbjct: 761 tacttctcttttttcttggaaggccaagtcgactttacaaacttgattccggcgtgtgtg 702

                                                           
Query: 366 tttttaatgtcacaataaggagaatctgtctctatcatcatcctctct 413
           || || || |||||||| ||||| || || || |||||||| ||||||
Sbjct: 701 ttcttgatatcacaatatggagagtcggtttcgatcatcattctctct 654



 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 48/53 (90%)
 Strand = Plus / Minus

                                                                
Query: 225 cctttgcatccagccactacctcaaggacttgccttactaaacaaggctcatt 277
           |||||| | |||||||| || |||||||||||||| |||||||||||||||||
Sbjct: 842 cctttgtagccagccaccacttcaaggacttgcctgactaaacaaggctcatt 790



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                   
Query: 135 gcatctgcagaaacatctatgtcatgagggaagaagagcctgcatgtgttgtggta 190
           |||||||||| |  ||||| ||| ||||||||||||| |||||| |||||||||||
Sbjct: 932 gcatctgcagcagaatctaagtcctgagggaagaagaccctgcaagtgttgtggta 877

---

>gb|AE017354.1| Legionella pneumophila subsp. pneumophila str. Philadelphia 1, complete
               genome
          Length = 3397754

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 379     aataaggagaatctgtctctatcatcatcctctct 413
               ||||||| ||||||||||||||||  |||||||||
Sbjct: 1547011 aataaggtgaatctgtctctatcaatatcctctct 1546977

---

>gb|AC137820.11| Medicago truncatula clone mth2-15f9, complete sequence
          Length = 134674

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 332   gatcgactttacaaactggattc 354
             |||||||||||||||||||||||
Sbjct: 98409 gatcgactttacaaactggattc 98431

---

>emb|CR628337.1| Legionella pneumophila str. Lens complete genome
          Length = 3345687

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 32/35 (91%)
 Strand = Plus / Minus

                                                  
Query: 379     aataaggagaatctgtctctatcatcatcctctct 413
               ||||||| ||||||||||||||||  |||||||||
Sbjct: 1508598 aataaggtgaatctgtctctatcagtatcctctct 1508564

---

>gb|AC102510.5| Mus musculus chromosome 5, clone RP24-346C14, complete sequence
          Length = 180051

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 46    aagagcaagtaaaatgaaatatttca 71
             ||||||||||||||||||| ||||||
Sbjct: 27878 aagagcaagtaaaatgaaacatttca 27903

---

>emb|AL031584.2|HS1158E12 Human DNA sequence from clone RP5-1158E12 on chromosome Xp11.23-11.4
             Contains a pseudogene similar to part of splicing factor,
             arginine/serine-rich 6 (B52, SRP55) (SFRS6), two novel
             genes and a CpG island, complete sequence
          Length = 163871

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 581   ttcagagaagtcttcaccagca 602
             ||||||||||||||||||||||
Sbjct: 47819 ttcagagaagtcttcaccagca 47798

---

>emb|BX247952.2| Mouse DNA sequence from clone RP24-405K16 on chromosome 4, complete
             sequence
          Length = 117872

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 55    taaaatgaaatatttcaaaaca 76
             ||||||||||||||||||||||
Sbjct: 77021 taaaatgaaatatttcaaaaca 77042

---

>emb|AL161729.27| Human DNA sequence from clone RP11-435O5 on chromosome 9q22.1-22.33
             Contains the PTCH gene for patched homolog, a novel gene,
             the gene for a novel protein similar to a metallothionein
             protein (MT1) and three CpG islands, complete sequence
          Length = 189643

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 470   aatacctataaacatattctc 490
             |||||||||||||||||||||
Sbjct: 60408 aatacctataaacatattctc 60388

---

>gb|AC084371.5| Homo sapiens BAC clone CTD-3220I23 from 2, complete sequence
          Length = 157685

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 45    gaagagcaagtaaaatgaaat 65
             |||||||||||||||||||||
Sbjct: 31108 gaagagcaagtaaaatgaaat 31128

---

>gb|AC107823.11| Mus musculus chromosome 8, clone RP23-184K1, complete sequence
          Length = 190966

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 54     gtaaaatgaaatatttcaaa 73
              ||||||||||||||||||||
Sbjct: 103745 gtaaaatgaaatatttcaaa 103726

---

>gb|AC129567.8| Mus musculus chromosome 8, clone RP23-50L10, complete sequence
          Length = 228046

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 579    atttcagagaagtcttcaccagca 602
              |||||||||||||||| |||||||
Sbjct: 106201 atttcagagaagtcttgaccagca 106178

---

>gb|AC153564.6| Mus musculus 10 BAC RP23-39C23 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 241022

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 140    tgcagaaacatctatgtcat 159
              ||||||||||||||||||||
Sbjct: 232992 tgcagaaacatctatgtcat 232973

---

>gb|AC146188.3| Pan troglodytes BAC clone RP43-35J3 from 7, complete sequence
          Length = 161143

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aatgaaatatttcaaaacaa 77
             ||||||||||||||||||||
Sbjct: 59193 aatgaaatatttcaaaacaa 59212

---

>emb|Z81122.1|CET13F2 Caenorhabditis elegans Cosmid T13F2, complete sequence
          Length = 38060

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 51    caagtaaaatgaaatatttc 70
             ||||||||||||||||||||
Sbjct: 17877 caagtaaaatgaaatatttc 17858

---

>ref|XM_648330.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (83.t00012)
          partial mRNA
          Length = 1356

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 55 taaaatgaaatatttcaaaacaat 78
          ||||||||||||||||| ||||||
Sbjct: 96 taaaatgaaatatttcataacaat 73

---

>gb|AC104700.4| Homo sapiens BAC clone RP11-712I20 from 7, complete sequence
          Length = 66759

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     tttaggacaccataaatatttcat 29
             |||||||||||||||| |||||||
Sbjct: 40661 tttaggacaccataaacatttcat 40638

---

>gb|AC006356.3| Homo sapiens PAC clone RP5-1111L2 from 7, complete sequence
          Length = 153206

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 58    aatgaaatatttcaaaacaa 77
             ||||||||||||||||||||
Sbjct: 81782 aatgaaatatttcaaaacaa 81801

---

>gb|AC142300.1| Pan troglodytes BAC clone RP43-127J18 from 7, complete sequence
          Length = 142598

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 6      tttaggacaccataaatatttcat 29
              |||||||||||||||| |||||||
Sbjct: 107199 tttaggacaccataaacatttcat 107176

---

>gb|AC130799.19| Medicago truncatula clone mth2-34b13, complete sequence
          Length = 133305

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 138   tctgcagaaacatctatgtc 157
             ||||||||||||||||||||
Sbjct: 21967 tctgcagaaacatctatgtc 21986

---

>emb|AL035588.21|HS696P19 Human DNA sequence from clone RP4-696P19 on chromosome 6p12.3-21.2
             Contains the 3' end of the TFEB gene for transcription
             factor EB (TCFEB), a nucleophosmin (nucleolar
             phosphoprotein B23, numatrin) (NPM1) pseudogene, the MDFI
             gene for MyoD family inhibitor, the 5' end of a novel gene
             and two CpG islands, complete sequence
          Length = 110665

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 395   ctctatcatcatcctctctg 414
             ||||||||||||||||||||
Sbjct: 86220 ctctatcatcatcctctctg 86201

---

>emb|CR628336.1| Legionella pneumophila str. Paris complete genome
          Length = 3503610

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 379     aataaggagaatctgtctctatca 402
               ||||||| ||||||||||||||||
Sbjct: 1510177 aataaggtgaatctgtctctatca 1510154

---

>emb|BX088713.8| Zebrafish DNA sequence from clone DKEY-1P9 in linkage group 2, complete
              sequence
          Length = 148916

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aaatgaaatatttcaaaaca 76
              ||||||||||||||||||||
Sbjct: 115874 aaatgaaatatttcaaaaca 115855

---

>gb|BC056924.1| Mus musculus microcephaly, primary autosomal recessive 1, mRNA (cDNA
            clone MGC:66518 IMAGE:5697978), complete cds
          Length = 4636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 579  atttcagagaagtcttcaccagca 602
            |||||||||||||||| |||||||
Sbjct: 3194 atttcagagaagtcttgaccagca 3217

---

>emb|BX649308.13| Zebrafish DNA sequence from clone CH211-223K15 in linkage group 11,
              complete sequence
          Length = 179056

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aaatgaaatatttcaaaaca 76
              ||||||||||||||||||||
Sbjct: 169205 aaatgaaatatttcaaaaca 169224

---

>gb|DQ283367.1| Scotobleps gabonicus 12S ribosomal RNA gene, partial sequence;
           tRNA-Val gene, complete sequence; and 16S ribosomal RNA
           gene, partial sequence; mitochondrial
          Length = 1984

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 55  taaaatgaaatatttcaaaacaat 78
           ||||||||||||||||||| ||||
Sbjct: 711 taaaatgaaatatttcaaagcaat 734

---

>gb|AC096541.2| Homo sapiens chromosome 1 clone RP11-330M19, complete sequence
          Length = 200368

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    taaaatgaaatatttcaaaa 74
             ||||||||||||||||||||
Sbjct: 91093 taaaatgaaatatttcaaaa 91112

---

>gb|AC124960.26| Medicago truncatula clone mth2-26j24, complete sequence
          Length = 125894

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 55     taaaatgaaatatttcaaaa 74
              ||||||||||||||||||||
Sbjct: 114586 taaaatgaaatatttcaaaa 114567

---

>emb|BX000477.13| Zebrafish DNA sequence from clone CH211-59D8 in linkage group 10,
             complete sequence
          Length = 176689

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaatgaaatatttcaaaaca 76
             ||||||||||||||||||||
Sbjct: 23933 aaatgaaatatttcaaaaca 23952

---

>gb|AC008380.9| Homo sapiens chromosome 5 clone CTC-215P6, complete sequence
          Length = 153903

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 152   tatgtcatgagggaagaaga 171
             ||||||||||||||||||||
Sbjct: 95320 tatgtcatgagggaagaaga 95301

---

>gb|AC008503.6| Homo sapiens chromosome 5 clone CTC-442P24, complete sequence
          Length = 153906

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 152   tatgtcatgagggaagaaga 171
             ||||||||||||||||||||
Sbjct: 58584 tatgtcatgagggaagaaga 58603

---

>dbj|AK017405.1| Mus musculus 6 days neonate head cDNA, RIKEN full-length enriched
           library, clone:5430437K10 product:unclassifiable, full
           insert sequence
          Length = 1580

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 579 atttcagagaagtcttcaccagca 602
           |||||||||||||||| |||||||
Sbjct: 156 atttcagagaagtcttgaccagca 179

---

>gb|AC006209.25| Homo sapiens X BAC GS1-546D14 (Genome Systems Human Bac Library) complete
              sequence
          Length = 141759

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 57     aaatgaaatatttcaaaaca 76
              ||||||||||||||||||||
Sbjct: 137077 aaatgaaatatttcaaaaca 137058

---

>gb|AC164979.2| Mus musculus BAC clone RP23-244J23 from chromosome 16, complete
             sequence
          Length = 202286

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    taaaatgaaatatttcaaaacaat 78
             |||||||| |||||||||||||||
Sbjct: 23736 taaaatgatatatttcaaaacaat 23759

---

>gb|AC146077.4| Pan troglodytes BAC clone RP43-45A15 from chromosome 7, complete sequence
          Length = 188174

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 6      tttaggacaccataaatatttcat 29
              |||||||||||||||| |||||||
Sbjct: 175201 tttaggacaccataaacatttcat 175224

---

>gb|AC025030.14|AC025030 Homo sapiens 12 BAC RP11-46I1 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 170921

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 152    tatgtcatgagggaagaaga 171
              ||||||||||||||||||||
Sbjct: 123940 tatgtcatgagggaagaaga 123959

---

>gb|AE013218.1| Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome
          Length = 641454

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 379    aataaggagaatctgtctctatca 402
              |||||||||||||||| |||||||
Sbjct: 389387 aataaggagaatctgtttctatca 389364

---

>dbj|AK174232.1| Ciona intestinalis cDNA, clone:cicl002h05, full insert sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 55   taaaatgaaatatttcaaaa 74
            ||||||||||||||||||||
Sbjct: 1965 taaaatgaaatatttcaaaa 1984

---

>emb|BX511034.11| Zebrafish DNA sequence from clone DKEY-57C15 in linkage group 22,
             complete sequence
          Length = 284624

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaatgaaatatttcaaaaca 76
             ||||||||||||||||||||
Sbjct: 70684 aaatgaaatatttcaaaaca 70703

---

>dbj|D31714.1|ATHCP33E Arabidopsis thaliana gene for chloroplast RNA-binding protein cp33,
            complete cds (exon1, exon2, exon3, exon4)
          Length = 3329

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 38/44 (86%)
 Strand = Plus / Plus

                                                        
Query: 135  gcatctgcagaaacatctatgtcatgagggaagaagagcctgca 178
            |||||||||| |  ||||| ||| ||||||||||||| ||||||
Sbjct: 2936 gcatctgcagcagaatctaagtcctgagggaagaagaccctgca 2979

---

>dbj|AK130586.1| Homo sapiens cDNA FLJ27076 fis, clone SPL02374, highly similar to
           Ig gamma-1 chain C region
          Length = 1615

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 122 actctcaagctgtgcatctgcagaaaca 149
           ||||||| ||||| ||||||||||||||
Sbjct: 400 actctcaggctgttcatctgcagaaaca 373

---

>emb|CR387997.18| Zebrafish DNA sequence from clone DKEY-13E3 in linkage group 4,
             complete sequence
          Length = 158108

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaatgaaatatttcaaaaca 76
             ||||||||||||||||||||
Sbjct: 26554 aaatgaaatatttcaaaaca 26573

---

>gb|AC153642.7| Mus musculus 6 BAC RP23-334E23 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 227781

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    taaaatgaaatatttcaaaa 74
             ||||||||||||||||||||
Sbjct: 20318 taaaatgaaatatttcaaaa 20337

---

>emb|CT027602.9| Mouse DNA sequence from clone RP24-359G24 on chromosome 16, complete
             sequence
          Length = 194283

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 55    taaaatgaaatatttcaaaacaat 78
             |||||||| |||||||||||||||
Sbjct: 46188 taaaatgatatatttcaaaacaat 46211

---

>emb|AL133233.2|CNS01DUA Human chromosome 14 DNA sequence BAC R-34O18 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168991

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 337    actttacaaactggattcca 356
              ||||||||||||||||||||
Sbjct: 118813 actttacaaactggattcca 118794

---

>gb|AC116725.13| Mus musculus chromosome 8, clone RP23-272P20, complete sequence
          Length = 201130

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 54     gtaaaatgaaatatttcaaa 73
              ||||||||||||||||||||
Sbjct: 177730 gtaaaatgaaatatttcaaa 177749

---

>emb|AJ556716.1|HSA556716 Homo sapiens partial mRNA for immunoglobulin gamma heavy chain
           variable region (IGHV3-11 gene), clone 2B-3G 09
          Length = 381

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 122 actctcaagctgtgcatctgcagaaaca 149
           ||||||| ||||| ||||||||||||||
Sbjct: 263 actctcaggctgttcatctgcagaaaca 236

---

>ref|NM_173189.2| Mus musculus microcephaly, primary autosomal recessive 1 (Mcph1),
            mRNA
          Length = 4636

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 579  atttcagagaagtcttcaccagca 602
            |||||||||||||||| |||||||
Sbjct: 3194 atttcagagaagtcttgaccagca 3217

---

>emb|AL929276.7| Zebrafish DNA sequence from clone CH211-59H6, complete sequence
          Length = 210630

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     aaatgaaatatttcaaaaca 76
              ||||||||||||||||||||
Sbjct: 168662 aaatgaaatatttcaaaaca 168681

---

>gb|AC093316.28| Mus musculus strain C57BL/6J chromosome 10 clone rp23-202i7, complete
             sequence
          Length = 226567

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 140   tgcagaaacatctatgtcat 159
             ||||||||||||||||||||
Sbjct: 75409 tgcagaaacatctatgtcat 75428

---

>gb|AC153640.6| Mus musculus 6 BAC RP23-230A2 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 208897

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 55     taaaatgaaatatttcaaaa 74
              ||||||||||||||||||||
Sbjct: 196181 taaaatgaaatatttcaaaa 196200

---

>emb|AL805929.7| Mouse DNA sequence from clone RP23-252O5 on chromosome X, complete
             sequence
          Length = 175802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 52    aagtaaaatgaaatatttca 71
             ||||||||||||||||||||
Sbjct: 27291 aagtaaaatgaaatatttca 27310

---

>emb|AJ519335.1|HSA519335 Homo sapiens partial mRNA for IgM immunoglobulin heavy chain
           variable region (IGHV gene), clone LIBPM327
          Length = 375

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                       
Query: 122 actctcaagctgtgcatctgcagaaaca 149
           ||||||| ||||| ||||||||||||||
Sbjct: 293 actctcaggctgttcatctgcagaaaca 266

---

>dbj|AB073334.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds,
           clone:Cpf4
          Length = 540

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 aggagaatctgtctctatca 402
           ||||||||||||||||||||
Sbjct: 78  aggagaatctgtctctatca 97

---

>dbj|AB073333.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds,
           clone:Cpf3
          Length = 537

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 aggagaatctgtctctatca 402
           ||||||||||||||||||||
Sbjct: 96  aggagaatctgtctctatca 115

---

>dbj|AB073332.1| Cyprinus carpio mRNA for immunoglobulin light chain, partial cds,
           clone:Cpf2
          Length = 534

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 383 aggagaatctgtctctatca 402
           ||||||||||||||||||||
Sbjct: 96  aggagaatctgtctctatca 115

---

>emb|AL591165.17| Mouse DNA sequence from clone RP23-336D20 on chromosome 11, complete
             sequence
          Length = 123050

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 57    aaatgaaatatttcaaaaca 76
             ||||||||||||||||||||
Sbjct: 50001 aaatgaaatatttcaaaaca 50020


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7,004,640
Number of Sequences: 3902068
Number of extensions: 7004640
Number of successful extensions: 147366
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 147023
Number of HSP's gapped (non-prelim): 332
length of query: 616
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 593
effective length of database: 17,143,297,704
effective search space: 10165975538472
effective search space used: 10165975538472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---