Clone Information

BLAST Search Result

Clone Name	rbasd11l23
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	GSR2_ARATH (O22892) Protein At2g40430	169	1e-41
2	YIY9_SCHPO (Q9UUI4) Hypothetical protein C22F8.09 in chromosome I	71	3e-12
3	GSCR2_DROME (Q9W3C2) Hypothetical protein CG1785	68	4e-11
4	GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region ge...	61	5e-09
5	GSCR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V	55	2e-07
6	YP146_YEAST (Q12080) Protein YPL146C	44	6e-04
7	PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (...	37	0.055
8	ITSN1_MOUSE (Q9Z0R4) Intersectin-1 (EH and SH3 domains protein 1)	37	0.055
9	ITSN1_XENLA (O42287) Intersectin-1	36	0.16
10	ITSN1_RAT (Q9WVE9) Intersectin-1 (EH domain and SH3 domain regul...	35	0.21
11	CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precurso...	35	0.21
12	ITSN1_HUMAN (Q15811) Intersectin-1 (SH3 domain-containing protei...	35	0.21
13	GARP_PLAFF (P13816) Glutamic acid-rich protein precursor	35	0.27
14	CALD1_RAT (Q62736) Non-muscle caldesmon (CDM) (L-caldesmon)	34	0.46
15	T2FB_YEAST (P41896) Transcription initiation factor IIF beta sub...	34	0.46
16	TRHY_HUMAN (Q07283) Trichohyalin	34	0.46
17	MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)	34	0.46
18	DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)	34	0.61
19	VPS72_MOUSE (Q62481) Vacuolar protein sorting protein 72 homolog...	34	0.61
20	SPEN_DROME (Q8SX83) Protein split ends	33	0.79
21	TRHY_SHEEP (P22793) Trichohyalin	33	0.79
22	DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)	33	1.0
23	EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associate...	33	1.0
24	CF182_MOUSE (Q8VDS7) Protein C6orf182 homolog	33	1.3
25	MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)	33	1.3
26	H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)	33	1.3
27	CALD1_CHICK (P12957) Caldesmon (CDM)	32	1.8
28	ATC8_YEAST (Q12674) Probable phospholipid-transporting ATPase DN...	32	2.3
29	Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050	32	2.3
30	YCF1_OENHO (Q9MTH5) Hypothetical 287.9 kDa protein ycf1	32	2.3
31	RAD50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase	32	3.0
32	BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	32	3.0
33	CING_MOUSE (P59242) Cingulin	32	3.0
34	MYSU_RABIT (Q99105) Myosin heavy chain, embryonic smooth muscle ...	32	3.0
35	E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-...	32	3.0
36	MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)	31	3.9
37	GLT12_MOUSE (Q8BGT9) Polypeptide N-acetylgalactosaminyltransfera...	31	3.9
38	CALD1_HUMAN (Q05682) Caldesmon (CDM)	31	3.9
39	E2AK4_MOUSE (Q9QZ05) Eukaryotic translation initiation factor 2-...	31	5.1
40	TOP1_PYRAB (Q9UYS8) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	31	5.1
41	MYOJ_DICDI (P54697) Myosin IJ heavy chain	31	5.1
42	CD008_HUMAN (P78312) Protein C4orf8 (Protein IT14)	31	5.1
43	BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-)...	31	5.1
44	GIN4_YEAST (Q12263) Serine/threonine-protein kinase GIN4 (EC 2.7...	31	5.1
45	TOP1_PYRHO (O58356) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoi...	30	6.7
46	H11_VOLCA (Q08864) Histone H1-I	30	6.7
47	PGK_PYRWO (P61884) Phosphoglycerate kinase (EC 2.7.2.3)	30	6.7
48	PGK_PYRFU (P61883) Phosphoglycerate kinase (EC 2.7.2.3)	30	6.7
49	CLPB_THET8 (Q9RA63) Chaperone clpB	30	6.7
50	ABA1_ASCSU (Q06811) ABA-1 polyprotein precursor (Body fluid alle...	30	6.7
51	Y1476_AQUAE (O67453) Hypothetical protein aq_1476	30	8.7
52	TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TR...	30	8.7
53	DNAA_ACHLA (Q9KHU8) Chromosomal replication initiator protein dnaA	30	8.7
54	MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper prote...	30	8.7

>GSR2_ARATH (O22892) Protein At2g40430|
          Length = 442

 Score =  169 bits (427), Expect = 1e-41
 Identities = 84/129 (65%), Positives = 103/129 (79%)
 Frame = -2

Query: 684 KKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTR 505
           +KTKRVTRVELNKR R+K   + E   K  E +  +IDSLPNILEEIAKED++K+ KH R
Sbjct: 313 RKTKRVTRVELNKRCRQKALRKKETKEKAKEKILNEIDSLPNILEEIAKEDEDKQNKHLR 372

Query: 504 RTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKRGI 325
           R +AKQE LK  P RLG++KFE  PVQVLLTEE++GSLRKLK CC LARDR+KS+EKRGI
Sbjct: 373 RVIAKQEVLKIRPPRLGKYKFEAPPVQVLLTEEMTGSLRKLKACCTLARDRFKSLEKRGI 432

Query: 324 LAPNKKLSK 298
           L P+K++ +
Sbjct: 433 LVPSKQIRR 441

to top

>YIY9_SCHPO (Q9UUI4) Hypothetical protein C22F8.09 in chromosome I|
          Length = 419

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 44/132 (33%), Positives = 78/132 (59%), Gaps = 1/132 (0%)
 Frame = -2

Query: 681 KTKRVTRVELNK-RARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTR 505
           K KR TR + NK R RR+E LR   + KK E L + ID  P I +++ ++DK ++  +  
Sbjct: 269 KNKRKTRSQRNKIRQRREEELRL-LEQKKNEELLRTIDKAPAISKKLQQKDKAEKFSNKA 327

Query: 504 RTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKRGI 325
            + +  E +K    + G+H+    P+++ L +E++ SLR+LK   NL  DRY S+++R +
Sbjct: 328 VSSSTTE-IKLKKKKFGKHRLPNNPLEIKLGDELTSSLRELKPEGNLFADRYLSLQQRAM 386

Query: 324 LAPNKKLSKRPR 289
           + P+  + K+ +
Sbjct: 387 VPPSLPVLKKSK 398

to top

>GSCR2_DROME (Q9W3C2) Hypothetical protein CG1785|
          Length = 478

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 43/132 (32%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
 Frame = -2

Query: 687 RKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKE-KELKH 511
           +KK+K+  R EL    ++KE  R     +KL+  +  +  + +I  E+  E+++  +LK 
Sbjct: 312 KKKSKQARRNEL----KQKELARQTELKRKLKQQTADLIRIKSIRHELDDEEEDLNDLKK 367

Query: 510 TRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKR 331
            R+  A  E+ K  P RLGRHKFE   + V L E+I+G+LR +K   +L +DR+ ++++ 
Sbjct: 368 RRKQRA--EKAKFEPKRLGRHKFEEPDLDVNLPEDIAGNLRNVKTESSLLKDRFHTLQRN 425

Query: 330 GILAPNKKLSKR 295
            +L   K +S++
Sbjct: 426 NMLPTTKLVSRK 437

to top

>GSCR2_HUMAN (Q9NZM5) Glioma tumor suppressor candidate region gene 2 protein|
           (p60)
          Length = 478

 Score = 60.8 bits (146), Expect = 5e-09
 Identities = 40/128 (31%), Positives = 69/128 (53%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
           +R++ K V R+ + + A R  RLR + +  +L  +  Q+      L E+A+         
Sbjct: 341 QRRREKAVHRLRVQQAALRAARLRHQ-ELFRLRGIKAQVALR---LAELARRQ------- 389

Query: 510 TRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKR 331
            RR  A++E     P RLGR K++   + V L+ E++ SLR LK   N+ RDR+KS ++R
Sbjct: 390 -RRRQARREAEADKPRRLGRLKYQAPDIDVQLSSELTDSLRTLKPEGNILRDRFKSFQRR 448

Query: 330 GILAPNKK 307
            ++ P ++
Sbjct: 449 NMIEPRER 456

to top

>GSCR2_CAEEL (Q9NEU5) Hypothetical protein Y39B6A.33 in chromosome V|
          Length = 438

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 43/138 (31%), Positives = 80/138 (57%), Gaps = 6/138 (4%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNIL--EEIAKE-DKEKE 520
           +R +  R+T+ +  K+A+ ++  + E   ++LE  +K+ DS  N+   +++ KE D+E++
Sbjct: 278 QRVECDRMTKEQKKKKAKAQKLDKEEK--RRLEEKAKEQDS-HNVYRTKQLHKELDEEEK 334

Query: 519 LKHTRRTVAKQERL---KSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRY 349
            +H    V K+E+L    +   +LG+ KF  A    LL EE++G+LR+LK   ++  DR 
Sbjct: 335 QRHEESEVRKKEKLINKLTKRQQLGKGKFVDAEDPFLLQEELTGNLRQLKPQGHVLDDRM 394

Query: 348 KSIEKRGILAPNKKLSKR 295
           KS+++R +L       KR
Sbjct: 395 KSLQRRNMLPIGGDKEKR 412

to top

>YP146_YEAST (Q12080) Protein YPL146C|
          Length = 455

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
 Frame = -2

Query: 681 KTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRR 502
           K K+ T+ + NK  R +E+++ + + K+L    K ++ + N  E       E +    ++
Sbjct: 315 KNKKKTKYQRNKAKRHEEKVKLQQELKELRQRVKDLEEVINSEETEILSAIESDSNKVKK 374

Query: 501 TVAKQERLKSAPHRLG-RHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKRG 328
           +       K+  H+LG ++      +++  ++E+S SLRKLK   NL  D  + ++  G
Sbjct: 375 SK------KNKKHKLGTKYSVIDERLEIKFSDELSDSLRKLKPEGNLLYDTVRKLQSSG 427

to top

>PCF11_HUMAN (O94913) Pre-mRNA cleavage complex 2 protein Pcf11 (Pre-mRNA|
           cleavage complex II protein Pcf11) (Fragment)
          Length = 1654

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 36/130 (27%), Positives = 60/130 (46%), Gaps = 8/130 (6%)
 Frame = -2

Query: 651 NKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIA--KEDKEKELKHTRRTVAKQERL 478
           NK +  K+    E+++ +L  ++K+   L   L++    K+D  KE + T     K E +
Sbjct: 475 NKLSHTKDLKNQESESMRLSDMNKRDPRLKKHLQDKTDGKDDDVKEKRKTAEKKDKDEHM 534

Query: 477 KSAPHRL--GRHKFEPAPVQV--LLTEEISGSLRKLKGCCNLARDRYKSIEKRG--ILAP 316
           KS+ HRL   R+K     VQ    +TEE      K        R R +S + R   I +P
Sbjct: 535 KSSEHRLAGSRNKIINGIVQKQDTITEESEKQGTKPGRSSTRKRSRSRSPKSRSPIIHSP 594

Query: 315 NKKLSKRPRR 286
            ++  + P+R
Sbjct: 595 KRRDRRSPKR 604

to top

>ITSN1_MOUSE (Q9Z0R4) Intersectin-1 (EH and SH3 domains protein 1)|
          Length = 1714

 Score = 37.4 bits (85), Expect = 0.055
 Identities = 26/72 (36%), Positives = 44/72 (61%)
 Frame = -2

Query: 699 LTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKE 520
           L  +RK+ +R+ ++E  ++  RKER R E +AK+   L KQ++     LE   +E++ KE
Sbjct: 372 LEQQRKEQERLAQLERAEQ-ERKERERQEQEAKRQLELEKQLEK-QRELERQREEERRKE 429

Query: 519 LKHTRRTVAKQE 484
           ++  RR  AK+E
Sbjct: 430 IE--RREAAKRE 439

to top

>ITSN1_XENLA (O42287) Intersectin-1|
          Length = 1270

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 24/72 (33%), Positives = 44/72 (61%)
 Frame = -2

Query: 699 LTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKE 520
           L  +RK+ +R+ ++E  ++  RKER R + + K+ + L KQ++     LE   +E++ KE
Sbjct: 371 LEQQRKEQERLAQLERAEQ-ERKERERQDQERKRQQDLEKQLEK-QRELERQREEERRKE 428

Query: 519 LKHTRRTVAKQE 484
           ++  RR  AK+E
Sbjct: 429 IE--RREAAKRE 438

to top

>ITSN1_RAT (Q9WVE9) Intersectin-1 (EH domain and SH3 domain regulator of|
           endocytosis 1)
          Length = 1217

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 25/72 (34%), Positives = 43/72 (59%)
 Frame = -2

Query: 699 LTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKE 520
           L  +RK+ +R+ ++E  ++  RKER R E + K+   L KQ++     LE   +E++ KE
Sbjct: 372 LEQQRKEQERLAQLERAEQ-ERKERERQEQERKRQLELEKQLEK-QRELERQREEERRKE 429

Query: 519 LKHTRRTVAKQE 484
           ++  RR  AK+E
Sbjct: 430 IE--RREAAKRE 439

to top

>CWLO_BACLD (Q65NQ9) Peptidoglycan DL-endopeptidase cwlO precursor (EC 3.4.-.-)|
           (D-gamma-glutamyl-meso-diaminopimelyl DL-endopeptidase)
          Length = 452

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
 Frame = -2

Query: 696 TGERKKTKRVTRVELNK--RARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAK-EDKE 526
           T ++K+  +  R E+N    ++RKE  + + + KKLE   +++D     LE   K EDKE
Sbjct: 32  TSQQKQEIQQKRSEVNSGIESKRKEIAKLQDEQKKLEGKIQELDK--KALETSNKIEDKE 89

Query: 525 KELKHTRRTV-AKQERLKSAPHRL 457
           KE K T++ V A ++ +K    R+
Sbjct: 90  KENKKTKKEVEALKKEIKETEKRI 113

to top

>ITSN1_HUMAN (Q15811) Intersectin-1 (SH3 domain-containing protein 1A) (SH3P17)|
          Length = 1721

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 25/72 (34%), Positives = 43/72 (59%)
 Frame = -2

Query: 699 LTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKE 520
           L  +RK+ +R+ ++E  ++  RKER R E + K+   L KQ++     LE   +E++ KE
Sbjct: 373 LEQQRKEQERLAQLERAEQ-ERKERERQEQERKRQLELEKQLEK-QRELERQREEERRKE 430

Query: 519 LKHTRRTVAKQE 484
           ++  RR  AK+E
Sbjct: 431 IE--RREAAKRE 440

to top

>GARP_PLAFF (P13816) Glutamic acid-rich protein precursor|
          Length = 678

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 33/131 (25%), Positives = 54/131 (41%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
           ERKK K     +  K  +  E    + D    E  ++ +  LP+ L ++   ++ KE +H
Sbjct: 321 ERKK-KEEKEKKKKKHDKENEETMQQPDQTSEETNNEIMVPLPSPLTDVTTPEEHKEGEH 379

Query: 510 TRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKR 331
                 K+E  K   H+ G HK E    +    EE      K KG     +D+ K  + +
Sbjct: 380 ------KEEEHKEGEHKEGEHKEEEHKEEEHKKEEHKSKEHKSKG----KKDKGKKDKGK 429

Query: 330 GILAPNKKLSK 298
              A  +K+ K
Sbjct: 430 HKKAKKEKVKK 440

to top

>CALD1_RAT (Q62736) Non-muscle caldesmon (CDM) (L-caldesmon)|
          Length = 531

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 2/228 (0%)
 Frame = -2

Query: 693 GERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELK 514
           G+R +  R  R E       K + + +  A +LE L K+ +    +LEE  +  K++E  
Sbjct: 272 GKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEAD 331

Query: 513 HTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEK 334
              R   ++ RLK     + R + E A  +  + E+     +K   C        K  E+
Sbjct: 332 RKAREEEEKRRLK---EEIERRRAEAAEKRQKMPEDGLSEDKKPFKCFTPKGSSLKIEER 388

Query: 333 RGILAPNKKLSKRPRR*MQGACSNTARNMAISLGSPKRLELME*TSADNAMENVVLQIDW 154
              L  NK + K        +   +    A+      RLE        NA+E        
Sbjct: 389 AEFL--NKSVQK--------SGVKSTHQAAVVSKIDSRLE-----QYTNAIEGTKASKPM 433

Query: 153 RPAQFCLVSIDEGVKRVASL--ECSRMSCPKMALVPFGQISYIRLAIS 16
           +PA   L    EGV+ + S+  + S  S P  +  P  + + +++ +S
Sbjct: 434 KPAASDLPVPAEGVRNIKSMWEKGSVFSSPSASGTPNKETAGLKVGVS 481

to top

>T2FB_YEAST (P41896) Transcription initiation factor IIF beta subunit (EC|
           3.6.1.-) (ATP-dependent helicase TFG2) (TFIIF-beta)
           (TFIIF medium subunit) (Transcription factor G 54 kDa
           subunit)
          Length = 400

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 21/82 (25%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
 Frame = -2

Query: 660 VELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEE--IAKEDKEKELKHTRRTVAKQ 487
           +EL K+    E + TE + KK +   K++++ P    +  + K+++E+ELK  ++   ++
Sbjct: 122 LELTKKVVENEYVFTEQNLKKYQQRKKELEADPEKQRQAYLKKQEREEELKKKQQQQKRR 181

Query: 486 ERLKSAPHRL-----GRHKFEP 436
              K   HR+     GR ++ P
Sbjct: 182 NNRKKFNHRVMTDRDGRDRYIP 203

to top

>TRHY_HUMAN (Q07283) Trichohyalin|
          Length = 1898

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
 Frame = -2

Query: 672 RVTRVELNKRAR--RKERL----RTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
           + T ++  KRAR   KE L    RTE D ++ E   +Q++  P       ++++E+EL  
Sbjct: 91  QATGLDEEKRARCDGKESLLQDRRTEEDQRRFEPRDRQLEEEPGQRRRQKRQEQERELAE 150

Query: 510 TRRTVAKQERLK 475
                 KQERL+
Sbjct: 151 GEEQSEKQERLE 162

to top

>MYO7A_HUMAN (Q13402) Myosin-7A (Myosin VIIa)|
          Length = 2215

 Score = 34.3 bits (77), Expect = 0.46
 Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
 Frame = -2

Query: 690  ERKKTKRVTRVELNK-RARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELK 514
            +R + + + R+E  K R   +E+LR E  AKK +  +++       L ++A+ED E+ELK
Sbjct: 857  QRLRAEYLWRLEAEKMRLAEEEKLRKEMSAKKAKEEAERKHQ--ERLAQLAREDAERELK 914

Query: 513  HTRRTVAKQERLKSAPHRLGRHKFEP 436
                   K+E L+    ++ R + EP
Sbjct: 915  EKEAARRKKELLE----QMERARHEP 936

to top

>DRS1_GIBZE (Q4I830) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 796

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 20/77 (25%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
 Frame = -2

Query: 702 SLTGERKKTKRVTRVELNK-RARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDK- 529
           +LT   +  ++V +  +   +A+  + +  + D+ +++ L  QID + + ++EI +E+K 
Sbjct: 601 ALTIAAESDRKVVKAAVKAGKAQGAKIVSRQLDSGEVDALQTQIDEMDDEIDEIMEEEKE 660

Query: 528 EKELKHTRRTVAKQERL 478
           EK+L H    V K E +
Sbjct: 661 EKQLAHVEMQVKKGENM 677

to top

>VPS72_MOUSE (Q62481) Vacuolar protein sorting protein 72 homolog (Protein YL-1)|
           (Transcription factor-like 1)
          Length = 368

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 25/128 (19%)
 Frame = -2

Query: 639 RRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDK-------------------EKEL 517
           RRK R+ T+A  + L+ L  +  S P    + A+E+K                   +   
Sbjct: 79  RRKRRVVTKAYKEPLKSLRPRKVSTPASSSQKAREEKTLLPLELQDDGSDSRKSMRQSTA 138

Query: 516 KHTRRTVAK-QERLKSAPHRLGRHKFEPAPVQVLL-----TEEISGSLRKLKGCCNLARD 355
           +HTR+T  + QER   +  R G H   P   + LL     TEE+  +LR L+    L  D
Sbjct: 139 EHTRQTFLRVQERQGQSRRRKGPHCERPLTQEELLREAKITEEL--NLRSLETYERLEAD 196

Query: 354 RYKSIEKR 331
           + K + K+
Sbjct: 197 KKKQVHKK 204

to top

>SPEN_DROME (Q8SX83) Protein split ends|
          Length = 5560

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 23/82 (28%), Positives = 44/82 (53%)
 Frame = -2

Query: 690  ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
            E+   K+V R E +++A+++ER + +  AK+ E   ++        E+ A+ED+EK+ + 
Sbjct: 1935 EKDLRKQVEREEKDRKAQQEEREKEDRKAKEEEKERER--------EKKAQEDREKKERE 1986

Query: 510  TRRTVAKQERLKSAPHRLGRHK 445
             R    K++R K    +  R K
Sbjct: 1987 ERELREKEQRDKEQKEKEIREK 2008

to top

>TRHY_SHEEP (P22793) Trichohyalin|
          Length = 1549

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 21/71 (29%), Positives = 33/71 (46%)
 Frame = -2

Query: 657 ELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERL 478
           +L +  R K R   E    + E L +Q + L    E++ +ED+EK  +  R     +E L
Sbjct: 693 QLQREEREKRRQERERQYLEKEELQRQEERLQREKEQLQREDREKR-RQVRERKYLEEEL 751

Query: 477 KSAPHRLGRHK 445
           +    RL R K
Sbjct: 752 QQEEDRLQREK 762

to top

>DRS1_DEBHA (Q6BTL5) ATP-dependent RNA helicase DRS1 (EC 3.6.1.-)|
          Length = 771

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 18/74 (24%), Positives = 41/74 (55%), Gaps = 8/74 (10%)
 Frame = -2

Query: 657 ELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKE-KELKHTRRTVAK--- 490
           E  + +++ + +    D K++E L+K ++S   ++EE+  E+K+ KE+ H    ++K   
Sbjct: 631 EQARNSKQGKAVSRNVDWKEVEELNKIVESKATVIEEVLDEEKQAKEMLHAEMELSKATN 690

Query: 489 ----QERLKSAPHR 460
               ++ ++S P R
Sbjct: 691 MIKHEKEIQSRPRR 704

to top

>EEA1_HUMAN (Q15075) Early endosome antigen 1 (Endosome-associated protein p162)|
            (Zinc finger FYVE domain-containing protein 2)
          Length = 1411

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 17/85 (20%)
 Frame = -2

Query: 672  RVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKE----------- 526
            + T  EL K    KE L TE    K + LSK  DSL N   E  KE+++           
Sbjct: 835  QTTVTELQKVKMEKEALMTELSTVK-DKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKT 893

Query: 525  -KELKH-----TRRTVAKQERLKSA 469
             KELKH        T+ +Q+ LK +
Sbjct: 894  CKELKHQLQVQMENTLKEQKELKKS 918

to top

>CF182_MOUSE (Q8VDS7) Protein C6orf182 homolog|
          Length = 400

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
 Frame = -2

Query: 699 LTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLP----------NILE 550
           L  ER+KT  + +    +R + +++++  A  +KL VL K+   L             LE
Sbjct: 137 LNVEREKTMILEQQAQLQREKEQDQMKLHAKLEKLHVLEKECLRLTATRQTAEDKIKCLE 196

Query: 549 EIAKEDKEKELKHTRRTVAKQERLKSAPHRLGRHKF 442
           E  KE++ +      R   K   LK  P +   HKF
Sbjct: 197 EKLKEEEHQRRLFQDRACEKTNCLKREPPQQRDHKF 232

to top

>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)|
          Length = 1391

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 7/77 (9%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRK-----ERLRTEADAKKLEVLSKQIDSLPNI--LEEIAKED 532
           E+KK K   + E     R+K     ++++  A+ KK E  +K+   +      EE+AK+ 
Sbjct: 443 EKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKCEETAKKGKEVAERKKCEELAKKI 502

Query: 531 KEKELKHTRRTVAKQER 481
           K+ E+K   + +AK+E+
Sbjct: 503 KKAEIKKKCKKLAKKEK 519



 Score = 31.2 bits (69), Expect = 3.9
 Identities = 36/151 (23%), Positives = 60/151 (39%), Gaps = 3/151 (1%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
           + KK K + R  L ++A  + ++R      K +   K +      L    KE+ EK+   
Sbjct: 293 DEKKEKELEREILKEQAEEEAKIRGVVKEVKKKCKEKALKKKCKDLGRKMKEEAEKKKCA 352

Query: 510 TRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKL---KGCCNLARDRYKSI 340
                 K+E  K A   L + K E    +    EE +   +K    K C   A++R ++ 
Sbjct: 353 ALAKKQKEEDEKKACKELAKKKKEAD--EKKKCEEAANKEKKAAEKKKCEKAAKERKEAA 410

Query: 339 EKRGILAPNKKLSKRPRR*MQGACSNTARNM 247
           EK+      KK  +   R     C   A+N+
Sbjct: 411 EKKKCEEAAKKEKEAAER---KKCEELAKNI 438

to top

>H14_CAEEL (O17536) Histone H1.4 (Histone H1-like protein 4)|
          Length = 252

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
 Frame = -2

Query: 696 TGERKKTKRVTRVELNKRARRKERLRTEA----DAKKLEVLSKQIDSLPNILEEIAKEDK 529
           TGE+K T  V +       +    +  +A     AKK EV  K++ S     ++IAK   
Sbjct: 158 TGEKKATTTVAKKAATGEKKATTTVAKKAAAGDKAKKTEVKVKKVKSP----KKIAKSPV 213

Query: 528 EKELKHTRRTVAKQERLKSAPHRLGRHKFEPAP 430
            K  K   + +AK   +K+AP +      + AP
Sbjct: 214 NKVTKSPVKKIAKSSSMKAAPKKAAAKPAKKAP 246

to top

>CALD1_CHICK (P12957) Caldesmon (CDM)|
          Length = 771

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 30/128 (23%), Positives = 57/128 (44%), Gaps = 8/128 (6%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKER---LRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKE 520
           E +K K   ++E  K    K +   LR + + K+ +V +K+ +SLP  L+  +K+D+ K+
Sbjct: 391 EAEKLKEKKKMEEKKAQEEKAQANLLRKQEEDKEAKVEAKK-ESLPEKLQPTSKKDQVKD 449

Query: 519 LKHTRRTVAKQ-----ERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARD 355
            K   +   ++     +R +  P +  ++         L + E +     LKG  N    
Sbjct: 450 NKDKEKAPKEEMKSVWDRKRGVPEQKAQNGERELTTPKLKSTENAFGRSNLKGAANAEAG 509

Query: 354 RYKSIEKR 331
             K  EK+
Sbjct: 510 SEKLKEKQ 517

to top

>ATC8_YEAST (Q12674) Probable phospholipid-transporting ATPase DNF3 (EC 3.6.3.1)|
          Length = 1656

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 2/79 (2%)
 Frame = -2

Query: 696  TGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKE--K 523
            T  R     V R  L+ +A RK      +  +  E   KQIDS+   LE + K D+E   
Sbjct: 895  TSLRNSLSSVPRASLSLQAVRKSLSMKNSRTRDPE---KQIDSIDQFLETVKKSDQEIGS 951

Query: 522  ELKHTRRTVAKQERLKSAP 466
             +  +R+++ KQ+  K  P
Sbjct: 952  VVNKSRKSLHKQQIEKYGP 970

to top

>Y5G8_ENCCU (Q8STA9) Hypothetical protein ECU05_1680/ECU11_0050|
          Length = 612

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 26/114 (22%), Positives = 49/114 (42%)
 Frame = -2

Query: 687 RKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHT 508
           R+  K+    +  +  +++E  R E   KK E   ++        +E  KE+K++E K  
Sbjct: 307 REMEKKEEEKKKEEEKKKEEEKRKEEKKKKKEEKKEEKKKKKEEKKEEKKEEKKEEKKEE 366

Query: 507 RRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYK 346
           ++   K+E+ K         + E +    + + E+ G+ RK        R RYK
Sbjct: 367 KKEEKKEEK-KEEKSGKSLREGEASEEAEMPSVEVGGARRKTGKKSEGGRKRYK 419

to top

>YCF1_OENHO (Q9MTH5) Hypothetical 287.9 kDa protein ycf1|
          Length = 2434

 Score = 32.0 bits (71), Expect = 2.3
 Identities = 24/76 (31%), Positives = 46/76 (60%), Gaps = 3/76 (3%)
 Frame = -2

Query: 690  ERKKTKRVTRVE--LNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKEL 517
            E+K+ K + + +  + K+ R+KE++  E   KK+E   K+I++    LE+  K  KE++ 
Sbjct: 2046 EKKRQKEIEKHKRKIEKQMRKKEKI--ENAKKKIENEKKKIETEEEKLEK-EKRKKERKK 2102

Query: 516  KHTRRTVAKQ-ERLKS 472
            +  ++ VAK  E+LK+
Sbjct: 2103 EKLKKKVAKNIEKLKN 2118

to top

>RAD50_PYRHO (O58687) DNA double-strand break repair rad50 ATPase|
          Length = 879

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 21/93 (22%), Positives = 47/93 (50%)
 Frame = -2

Query: 657 ELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERL 478
           +LN+  R+ ++ + E   +K+  LS +I  L   LEE+  E +  E+K T   + ++ + 
Sbjct: 648 QLNELQRKFDQKKYEEKREKMMKLSMEIKGLETKLEEL--ERRRDEIKSTIEKLKEERKE 705

Query: 477 KSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLK 379
           + +     + + E   + +   EE+ G +++ K
Sbjct: 706 RES----AKMELEKLNIAIKRIEELRGKIKEYK 734

to top

>BRE1A_MOUSE (Q5DTM8) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
            finger protein 20)
          Length = 973

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 26/113 (23%), Positives = 48/113 (42%)
 Frame = -2

Query: 696  TGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKEL 517
            TGE++   R   +E+NKR   +     +    +LE+  K++    + + E     KEK+L
Sbjct: 816  TGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVE-NSVTKEKDL 874

Query: 516  KHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLAR 358
             + +R      RL+       +    P   ++L+ E      R    CCN+ +
Sbjct: 875  FNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRK 927

to top

>CING_MOUSE (P59242) Cingulin|
          Length = 1191

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 25/109 (22%), Positives = 52/109 (47%), Gaps = 1/109 (0%)
 Frame = -2

Query: 702 SLTGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAK-EDKE 526
           S+  + K+  R T+ EL +    KE +  E   +K+EVL + ++       +  + E+ +
Sbjct: 561 SMFQKNKEELRATKQELLQLRMEKEEMEEEL-GEKMEVLQRDLEQARASTRDTHQVEELK 619

Query: 525 KELKHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLK 379
           KEL+ T+  + + +  +      GRH+ +    Q+    E +   R+L+
Sbjct: 620 KELRRTQGELKELQAEQQNQEVTGRHRNQVLEKQLAALREEADRGRELE 668

to top

>MYSU_RABIT (Q99105) Myosin heavy chain, embryonic smooth muscle isoform|
           (Fragment)
          Length = 501

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 20/69 (28%), Positives = 35/69 (50%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKH 511
           +R  TK+V  +E      RK+R    A  KK+E+  K +++      E A + +E+ +K 
Sbjct: 116 KRLLTKQVRELEAELEDERKQRALAVASKKKMEIDLKDLEA----QIEAANKARERRVKQ 171

Query: 510 TRRTVAKQE 484
            RR  A+ +
Sbjct: 172 LRRLQAQMK 180

to top

>E2AK4_HUMAN (Q9P2K8) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein)
          Length = 1649

 Score = 31.6 bits (70), Expect = 3.0
 Identities = 19/54 (35%), Positives = 28/54 (51%)
 Frame = -2

Query: 630 ERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLKSA 469
           ER   E   + LE   K+      IL EI +  +E + +  R+ +AKQERL+ A
Sbjct: 151 ERRAQEEQQRLLEAKRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLEIA 204

to top

>MYO7A_MOUSE (P97479) Myosin-7A (Myosin VIIa)|
          Length = 2215

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
 Frame = -2

Query: 684  KKTKRVTRVELNKRAR-------RKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKE 526
            ++  R  RVE  +R          +E+LR E  AKK +  +++       L ++A+ED E
Sbjct: 853  RRLHRRLRVEYQRRLEAERMRLAEEEKLRKEMSAKKAKEEAERKHQ--ERLAQLAREDAE 910

Query: 525  KELKHTRRTVAKQERLK 475
            +ELK       K+E L+
Sbjct: 911  RELKEKEEARRKKELLE 927

to top

>GLT12_MOUSE (Q8BGT9) Polypeptide N-acetylgalactosaminyltransferase 12 (EC|
           2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase
           12) (UDP-GalNAc:polypeptide
           N-acetylgalactosaminyltransferase 12) (Polypeptide
           GalNAc transferase 12) (GalNAc-T12) (pp-GaNTas
          Length = 576

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 20/72 (27%), Positives = 34/72 (47%)
 Frame = -2

Query: 693 GERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELK 514
           G+ +  +  TR E+    R+ E   T  D K   V+    +++P   E I +ED     K
Sbjct: 478 GQNQFFEYTTRKEIRYNTRQPEACITVEDGKDTLVMDLCRETVPENQEFILQEDGTLVHK 537

Query: 513 HTRRTVAKQERL 478
           H+R+ V   E++
Sbjct: 538 HSRKCVEATEKV 549

to top

>CALD1_HUMAN (Q05682) Caldesmon (CDM)|
          Length = 793

 Score = 31.2 bits (69), Expect = 3.9
 Identities = 51/228 (22%), Positives = 89/228 (39%), Gaps = 2/228 (0%)
 Frame = -2

Query: 693  GERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELK 514
            G+R +  R  R E       K + + +  A +LE L K+ +    +LEE  +  K++E  
Sbjct: 533  GKRLEELRRRRGETESEEFEKLKQKQQEAALELEELKKKREERRKVLEEEEQRRKQEEAD 592

Query: 513  HTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEK 334
               R   ++ RLK     + R + E A  +  + E+     +K   C        K  E+
Sbjct: 593  RKLREEEEKRRLK---EEIERRRAEAAEKRQKMPEDGLSDDKKPFKCFTPKGSSLKIEER 649

Query: 333  RGILAPNKKLSKRPRR*MQGACSNTARNMAISLGSPKRLELME*TSADNAMENVVLQIDW 154
               L  NK + K        +   +    AI      RLE        +A+E        
Sbjct: 650  AEFL--NKSVQK-------SSGVKSTHQAAIVSKIDSRLE-----QYTSAIEGTKSAKPT 695

Query: 153  RPAQFCLVSIDEGVKRVASL--ECSRMSCPKMALVPFGQISYIRLAIS 16
            +PA   L    EGV+ + S+  + +  S P  A  P  + + +++ +S
Sbjct: 696  KPAASDLPVPAEGVRNIKSMWEKGNVFSSPTAAGTPNKETAGLKVGVS 743

to top

>E2AK4_MOUSE (Q9QZ05) Eukaryotic translation initiation factor 2-alpha kinase 4|
           (EC 2.7.11.1) (GCN2-like protein) (mGCN2)
          Length = 1648

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 18/52 (34%), Positives = 27/52 (51%)
 Frame = -2

Query: 630 ERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLK 475
           ER   E   + LE   K+      IL EI +  +E + +  R+ +AKQERL+
Sbjct: 151 ERQAQEKQQRLLEARRKEEQEQREILHEIQRRKEEIKEEKKRKEMAKQERLE 202

to top

>TOP1_PYRAB (Q9UYS8) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 685

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 35/129 (27%), Positives = 53/129 (41%), Gaps = 3/129 (2%)
 Frame = -2

Query: 684 KKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTR 505
           K    +  VEL +   RK  L  +    K EV+ +    L  ILEE  K + E  L+  R
Sbjct: 531 KYVPEIISVELTREFERKMDLIMQGKLTKEEVIEEAKVKLTKILEEFKKRELEIGLELAR 590

Query: 504 RTV--AKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLAR-DRYKSIEK 334
             V   K E  +  P  +G+    P     L+ +    + ++  GC N  + D    I +
Sbjct: 591 IVVGDVKDEIKEEKPIVVGKC---PKCGGDLIVKYNKKTGKRFVGCSNWPKCDVTYPILQ 647

Query: 333 RGILAPNKK 307
           RG + P  K
Sbjct: 648 RGEIIPTNK 656

to top

>MYOJ_DICDI (P54697) Myosin IJ heavy chain|
          Length = 2245

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
 Frame = -2

Query: 555  LEEIAKEDKEKELKHTRRTVAKQERLKSAPHRLGR----HKFEPAPVQVLLTEEISGSLR 388
            LE++ +E  E+ +K +   +  +E  K   ++L      HK +   +Q+ LTE+ +  ++
Sbjct: 1208 LEQLVQEQSEQLIKLSSEKLGSEEEAKKQINQLELELTDHKSK-LQIQLQLTEQSNEKIK 1266

Query: 387  KLKGCCNLARDRYKSIEK 334
            KLKG     +D  K +++
Sbjct: 1267 KLKGKLEEYQDEKKQLQQ 1284

to top

>CD008_HUMAN (P78312) Protein C4orf8 (Protein IT14)|
          Length = 1265

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 27/121 (22%), Positives = 51/121 (42%), Gaps = 5/121 (4%)
 Frame = -2

Query: 681  KTKRVTRVELNKRARRK-----ERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKEL 517
            +TK V+     KRAR K     E+ R EA+A+  E L  Q +      EE  +E++E   
Sbjct: 859  ETKPVSSTRAAKRARHKQRKLEEKARLEAEARAREHLHLQ-EEQRRREEEEDEEEEEDRF 917

Query: 516  KHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIE 337
            K   + + + ++L++   +      +  P   +LT     +   +    N+     +  E
Sbjct: 918  KEEFQRLQELQKLRAVKKKKKERPSKDCPKLDMLTRNFQAATESVPNSGNIHNGSLEQTE 977

Query: 336  K 334
            +
Sbjct: 978  E 978

to top

>BRE1A_HUMAN (Q5VTR2) Ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (RING|
            finger protein 20)
          Length = 975

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 25/113 (22%), Positives = 48/113 (42%)
 Frame = -2

Query: 696  TGERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKEL 517
            TGE++   R   +E+NKR   +     +    +LE+  K++    + + E     KEK++
Sbjct: 818  TGEKELGLRTQALEMNKRKAMEAAQLADDLKAQLELAQKKLHDFQDEIVE-NSVTKEKDM 876

Query: 516  KHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLAR 358
             + +R      RL+       +    P   ++L+ E      R    CCN+ +
Sbjct: 877  FNFKRAQEDISRLRRKLETTKKPDNVPKCDEILMEEIKDYKARLTCPCCNMRK 929

to top

>GIN4_YEAST (Q12263) Serine/threonine-protein kinase GIN4 (EC 2.7.11.1)|
          Length = 1142

 Score = 30.8 bits (68), Expect = 5.1
 Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 7/73 (9%)
 Frame = -2

Query: 690 ERKKTKRVTRVELNKRARRKER-------LRTEADAKKLEVLSKQIDSLPNILEEIAKED 532
           ERK  +   R EL +R R++E        L  E   +K E L KQI+   + LE+   + 
Sbjct: 567 ERKVREAKAREELERRRRKQEEKERARKLLEKEDLKRKQEELKKQIEIDISDLEQELSKH 626

Query: 531 KEKELKHTRRTVA 493
           KE++L    R+++
Sbjct: 627 KEEKLDGNIRSIS 639

to top

>TOP1_PYRHO (O58356) DNA topoisomerase 1 (EC 5.99.1.2) (DNA topoisomerase I)|
           (Omega-protein) (Relaxing enzyme) (Untwisting enzyme)
           (Swivelase)
          Length = 686

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 19/67 (28%), Positives = 30/67 (44%)
 Frame = -2

Query: 684 KKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTR 505
           K    +  VEL +   +K  L  E    K EV+ +  + L  ILEE  K + E  ++  +
Sbjct: 531 KYVPEIISVELTREFEKKMELIMEGRLTKEEVIEEAKERLTKILEEFKKRELEIGIELAK 590

Query: 504 RTVAKQE 484
             V + E
Sbjct: 591 IVVGEDE 597

to top

>H11_VOLCA (Q08864) Histone H1-I|
          Length = 260

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
 Frame = -2

Query: 681 KTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNI------LEEIAKEDKEKE 520
           K     + +  K   +K +   EA  KK E   K+ +++         +E   KE KEK 
Sbjct: 125 KLSEALKAKAKKSTPKKAKADGEAKPKKSEAKPKKAEAVKKTKAPKEKVERPKKEKKEKV 184

Query: 519 LKHTRRTVAKQERLKSAPHRLGRHKFEPAP 430
            K      A++ +  + P   G+ K  P P
Sbjct: 185 EKKKATPKAEKPKKAATPKSAGKKKATPKP 214

to top

>PGK_PYRWO (P61884) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 410

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = -2

Query: 591 VLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLT 412
           ++ K++D+L       A E +EK   +        + LK A + L + K +     ++LT
Sbjct: 173 LMEKEVDALTK-----AYESEEKPRVYVLGGAKVDDSLKVAENVLRKEKAD-----LILT 222

Query: 411 EEISGSLRKLKGCCNLARDRYKSIEKRGIL 322
             + G L  L    +L R+  K +EK+GIL
Sbjct: 223 GGLVGQLFTLAKGFDLGRENIKFLEKKGIL 252

to top

>PGK_PYRFU (P61883) Phosphoglycerate kinase (EC 2.7.2.3)|
          Length = 410

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 25/90 (27%), Positives = 43/90 (47%)
 Frame = -2

Query: 591 VLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLKSAPHRLGRHKFEPAPVQVLLT 412
           ++ K++D+L       A E +EK   +        + LK A + L + K +     ++LT
Sbjct: 173 LMEKEVDALTK-----AYESEEKPRVYVLGGAKVDDSLKVAENVLRKEKAD-----LILT 222

Query: 411 EEISGSLRKLKGCCNLARDRYKSIEKRGIL 322
             + G L  L    +L R+  K +EK+GIL
Sbjct: 223 GGLVGQLFTLAKGFDLGRENIKFLEKKGIL 252

to top

>CLPB_THET8 (Q9RA63) Chaperone clpB|
          Length = 854

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 22/86 (25%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
 Frame = -2

Query: 588 LSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLKSAPHR-LGR-HKFEPAPVQVLL 415
           +  Q   LP++   + K+++    +   +  A  + LK    R L R  K E A V   L
Sbjct: 24  MKHQAIDLPHLWAVLLKDERSLAWRLLEKAGADPKALKELQERELARLPKVEGAEVGQYL 83

Query: 414 TEEISGSLRKLKGCCNLARDRYKSIE 337
           T  +SG+L + +      +DRY +++
Sbjct: 84  TSRLSGALNRAEALMEELKDRYVAVD 109

to top

>ABA1_ASCSU (Q06811) ABA-1 polyprotein precursor (Body fluid allergen 1)|
           (Allergen Asc s 1) (Nematode polyprotein allergen ABA-1)
           (NPA ABA-1) [Contains: ABA-1B1 repeat unit; ABA-1A4
           repeat unit; ABA-1A3 repeat unit; ABA-1A2 repeat unit;
           ABA-1A1 repeat uni
          Length = 1365

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 18/48 (37%), Positives = 26/48 (54%)
 Frame = -2

Query: 615 EADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHTRRTVAKQERLKS 472
           E DAKK E      D    IL+ +  E+KE ELK  + + A +E +K+
Sbjct: 448 EGDAKK-EATEHLKDGCREILKHVVGEEKEAELKKLKDSGASKEEVKA 494

to top

>Y1476_AQUAE (O67453) Hypothetical protein aq_1476|
          Length = 180

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
 Frame = -2

Query: 600 KLEVLSKQIDSLPNILEEIAKE--DKEKELKHTRRTVAKQERLKSAPHRLGRHK 445
           ++E L ++I+ +   L+ I KE  + E+EL+  R+ +AK+E    A  R  RHK
Sbjct: 17  EIEKLRERIEKVKETLDLIPKEIEELERELERVRQEIAKKEDELIAVAREIRHK 70

to top

>TRIPB_HUMAN (Q15643) Thyroid receptor-interacting protein 11 (TRIP-11)|
            (Golgi-associated microtubule-binding protein 210)
            (GMAP-210) (Trip230) (Clonal evolution related gene on
            chromosome 14)
          Length = 1979

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 5/77 (6%)
 Frame = -2

Query: 690  ERKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIA-----KEDKE 526
            E+ ++    + E N      ERLR E          K +DS+  +  E++     KE  E
Sbjct: 850  EKDRSLGSMKEENNHLQEELERLREEQSRTAPVADPKTLDSVTELASEVSQLNTIKEHLE 909

Query: 525  KELKHTRRTVAKQERLK 475
            +E+KH ++ +  Q + K
Sbjct: 910  EEIKHHQKIIEDQNQSK 926

to top

>DNAA_ACHLA (Q9KHU8) Chromosomal replication initiator protein dnaA|
          Length = 445

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 16/48 (33%), Positives = 25/48 (52%)
 Frame = +2

Query: 128 LTRQNCAGLQSICRTTFSIALSALVYSINSSRFGLPSEIAMFLAVLEH 271
           L   N   +QSI    F ++L  L+     ++F LP  IAM+L  L++
Sbjct: 352 LNENNYDKIQSIVADYFQVSLPDLIGKKRHAKFTLPRHIAMYLIKLKY 399

to top

>MYSN_DROME (Q99323) Myosin heavy chain, non-muscle (Zipper protein) (Myosin II)|
            (Non-muscle MHC)
          Length = 2057

 Score = 30.0 bits (66), Expect = 8.7
 Identities = 36/158 (22%), Positives = 67/158 (42%)
 Frame = -2

Query: 687  RKKTKRVTRVELNKRARRKERLRTEADAKKLEVLSKQIDSLPNILEEIAKEDKEKELKHT 508
            R   K++  +E      RK+R    A  KKLE   K+I++      E+  + KE  LKH 
Sbjct: 1676 RGLVKQLRDLETELDEERKQRTAAVASKKKLEGDLKEIET----TMEMHNKVKEDALKHA 1731

Query: 507  RRTVAKQERLKSAPHRLGRHKFEPAPVQVLLTEEISGSLRKLKGCCNLARDRYKSIEKRG 328
            ++    Q ++K A       K     +Q  L++E  G ++ L+       +   S E+  
Sbjct: 1732 KKL---QAQVKDALRDAEEAKAAKEELQA-LSKEADGKVKALEAEVLQLTEDLASSERA- 1786

Query: 327  ILAPNKKLSKRPRR*MQGACSNTARNMAISLGSPKRLE 214
                 ++ ++  R  +    +N A   ++ +   +RLE
Sbjct: 1787 -----RRAAETERDELAEEIANNANKGSLMIDEKRRLE 1819


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,189,068
Number of Sequences: 219361
Number of extensions: 1934024
Number of successful extensions: 6970
Number of sequences better than 10.0: 54
Number of HSP's better than 10.0 without gapping: 6612
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6944
length of database: 80,573,946
effective HSP length: 110
effective length of database: 56,444,236
effective search space used: 8635968108
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

to top

full-length cDNA and EST

Clone Information

BLAST Search Result