ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11l22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_478533.1| Oryza sativa (japonica cultivar-group), mRNA 82 3e-12
2dbj|AK067845.1| Oryza sativa (japonica cultivar-group) cDNA clon... 82 3e-12
3dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
4dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic D... 72 3e-09
5gb|AY816940.1| Uncultured bacterium clone LE69 small subunit rib... 44 0.57
6emb|AL390725.16| Human DNA sequence from clone RP11-373C9 on chr... 42 2.2
7gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2... 42 2.2
8gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park C... 42 2.2
9emb|BX324145.12| Zebrafish DNA sequence from clone CH211-207C13 ... 42 2.2
10gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M1... 42 2.2
11emb|CR848667.23| Zebrafish DNA sequence from clone CH211-257P13 ... 42 2.2
12ref|NM_101398.3| Arabidopsis thaliana unknown protein AT1G15290 ... 40 8.9
13ref|XM_629680.1| Dictyostelium discoideum uroporphyrinogen decar... 40 8.9
14ref|XM_513508.1| PREDICTED: Pan troglodytes similar to zinc fing... 40 8.9
15gb|DQ167394.1| Triticum aestivum AFLP-derived marker P-ACG/M-GCG... 40 8.9
16gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromo... 40 8.9
17gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete... 40 8.9
18emb|AL365332.9| Human DNA sequence from clone RP11-212L9 on chro... 40 8.9
19emb|AL356513.15| Human DNA sequence from clone RP11-108A15 on ch... 40 8.9
20ref|XM_775615.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 8.9
21gb|BC035079.2| Homo sapiens zinc finger, ZZ-type containing 3, m... 40 8.9
22emb|AL805916.7| Mouse DNA sequence from clone RP23-164N15 on chr... 40 8.9
23gb|BC035818.2| Homo sapiens zinc finger, ZZ-type containing 3, m... 40 8.9
24gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence 40 8.9
25ref|NM_015534.3| Homo sapiens zinc finger, ZZ-type containing 3 ... 40 8.9
26gb|AC093296.2| Homo sapiens chromosome 5 clone RP11-536I7, compl... 40 8.9
27gb|AC093689.4| Homo sapiens BAC clone RP11-725M22 from 4, comple... 40 8.9
28dbj|AK001224.1| Homo sapiens cDNA FLJ10362 fis, clone NT2RM20013... 40 8.9
29gb|AC109496.2| Homo sapiens chromosome 5 clone RP11-93D22, compl... 40 8.9
30emb|CR388709.1| Gallus gallus finished cDNA, clone ChEST880k7 40 8.9
31dbj|AK045182.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 8.9
32gb|BC035397.1| Homo sapiens zinc finger, ZZ-type containing 3, m... 40 8.9
33gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana... 40 8.9
34dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 40 8.9
35emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chr... 40 8.9
36emb|BX641096.1|HSM806926 Homo sapiens mRNA; cDNA DKFZp686N03151 ... 40 8.9
37emb|BX641001.1|HSM807165 Homo sapiens mRNA; cDNA DKFZp686C16148 ... 40 8.9
38emb|BX640658.1|HSM806714 Homo sapiens mRNA; cDNA DKFZp313N0119 (... 40 8.9
39emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in... 40 8.9
40gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 se... 40 8.9
41emb|AL080063.1|HSM800564 Homo sapiens mRNA; cDNA DKFZp564I052 (f... 40 8.9
42dbj|AK074119.1| Homo sapiens mRNA for FLJ00191 protein 40 8.9 
>ref|XM_478533.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1413

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                        
Query: 559  agagttgattgatagctatttagttttcttctagtctcctcaacacagattcagcaaaca 618
            |||||||||||||| || ||||| |||| || ||||||| ||||||||| |||||||| |
Sbjct: 1176 agagttgattgatatctgtttagctttcctccagtctccgcaacacagagtcagcaaaga 1117

                                     
Query: 619  tgcgctgcttttcctcagtatgttt 643
            |||||||||| || ||||| |||||
Sbjct: 1116 tgcgctgcttctcttcagtgtgttt 1092
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>dbj|AK067845.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013124G01, full
            insert sequence
          Length = 1413

 Score = 81.8 bits (41), Expect = 3e-12
 Identities = 74/85 (87%)
 Strand = Plus / Minus

                                                                        
Query: 559  agagttgattgatagctatttagttttcttctagtctcctcaacacagattcagcaaaca 618
            |||||||||||||| || ||||| |||| || ||||||| ||||||||| |||||||| |
Sbjct: 1176 agagttgattgatatctgtttagctttcctccagtctccgcaacacagagtcagcaaaga 1117

                                     
Query: 619  tgcgctgcttttcctcagtatgttt 643
            |||||||||| || ||||| |||||
Sbjct: 1116 tgcgctgcttctcttcagtgtgttt 1092
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                            
Query: 559      agagttgattgatagctatttagttttcttctagtctcctcaacacagattcagcaaaca 618
                |||||||||||||| || ||||| |||| || ||||||| ||||||||| |||||||| |
Sbjct: 20754754 agagttgattgatatctgtttagctttcctccagtctccgcaacacagagtcagcaaaga 20754813

                        
Query: 619      tgcgctgc 626
                ||||||||
Sbjct: 20754814 tgcgctgc 20754821
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>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
              clone:P0681F05
          Length = 144741

 Score = 71.9 bits (36), Expect = 3e-09
 Identities = 60/68 (88%)
 Strand = Plus / Plus

                                                                          
Query: 559    agagttgattgatagctatttagttttcttctagtctcctcaacacagattcagcaaaca 618
              |||||||||||||| || ||||| |||| || ||||||| ||||||||| |||||||| |
Sbjct: 107504 agagttgattgatatctgtttagctttcctccagtctccgcaacacagagtcagcaaaga 107563

                      
Query: 619    tgcgctgc 626
              ||||||||
Sbjct: 107564 tgcgctgc 107571
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>gb|AY816940.1| Uncultured bacterium clone LE69 small subunit ribosomal RNA gene,
          partial sequence
          Length = 511

 Score = 44.1 bits (22), Expect = 0.57
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 60 ttcttctaactttgtgcaagca 81
          ||||||||||||||||||||||
Sbjct: 85 ttcttctaactttgtgcaagca 64
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>emb|AL390725.16| Human DNA sequence from clone RP11-373C9 on chromosome 1 Contains the
             3' end of the ZNF364 gene for zinc finger protein 364, the
             CD160 gene for CD160 antigen, the PDZK1 gene for PDZ
             domain containing 1, the 3' end of the gene for putative
             G-protein coupled receptor SH120 and a CpG island,
             complete sequence
          Length = 140348

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 297   taaccaatcatataagatattaaaa 321
             |||||||||||| ||||||||||||
Sbjct: 82161 taaccaatcatacaagatattaaaa 82185
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>gb|AE014817.1| Plasmodium falciparum 3D7 chromosome 14 section 2 of 13 of the complete
             sequence
          Length = 254449

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 303   atcatataagatattaaaaga 323
             |||||||||||||||||||||
Sbjct: 37785 atcatataagatattaaaaga 37765
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>gb|AC087880.24| Homo sapiens 12q BAC RP11-121J20 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 188361

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 112    tcttaaccaatttgttttttc 132
              |||||||||||||||||||||
Sbjct: 176652 tcttaaccaatttgttttttc 176672
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>emb|BX324145.12| Zebrafish DNA sequence from clone CH211-207C13 in linkage group 16,
             complete sequence
          Length = 196595

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 302   aatcatataagatattaaaag 322
             |||||||||||||||||||||
Sbjct: 36260 aatcatataagatattaaaag 36280
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>gb|AC008528.6|AC008528 Homo sapiens chromosome 5 clone CTC-473M13, complete sequence
          Length = 125764

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 14    tttaacctatgtatttttaaa 34
             |||||||||||||||||||||
Sbjct: 69818 tttaacctatgtatttttaaa 69838
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>emb|CR848667.23| Zebrafish DNA sequence from clone CH211-257P13 in linkage group 15,
              complete sequence
          Length = 157566

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 302    aatcatataagatattaaaag 322
              |||||||||||||||||||||
Sbjct: 149487 aatcatataagatattaaaag 149467
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>ref|NM_101398.3| Arabidopsis thaliana unknown protein AT1G15290 mRNA, complete cds
          Length = 5147

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 55   cttgtttcttctaactttgt 74
            ||||||||||||||||||||
Sbjct: 1640 cttgtttcttctaactttgt 1621
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>ref|XM_629680.1| Dictyostelium discoideum uroporphyrinogen decarboxylase
           (DDB0231418), partial mRNA
          Length = 1095

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 102 tgctttaacttcttaaccaatttg 125
           |||||||||||||| |||||||||
Sbjct: 738 tgctttaacttctttaccaatttg 715
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>ref|XM_513508.1| PREDICTED: Pan troglodytes similar to zinc finger, ZZ domain
            containing 3 (LOC456964), mRNA
          Length = 2421

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 2272 gactgtctacatgaaacaga 2291
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>gb|DQ167394.1| Triticum aestivum AFLP-derived marker P-ACG/M-GCG-339 genomic
           sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 574 ctatttagttttcttctagt 593
           ||||||||||||||||||||
Sbjct: 263 ctatttagttttcttctagt 244
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>gb|AC183838.2| Pan troglodytes BAC clone CH251-11K10 from chromosome 7, complete
             sequence
          Length = 153555

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tgtgtacgatgcaaaatctg 406
             ||||||||||||||||||||
Sbjct: 55568 tgtgtacgatgcaaaatctg 55549
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>gb|AC004845.2| Homo sapiens PAC clone RP4-635O5 from 7, complete sequence
          Length = 69847

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   tgtgtacgatgcaaaatctg 406
             ||||||||||||||||||||
Sbjct: 59452 tgtgtacgatgcaaaatctg 59433
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>emb|AL365332.9| Human DNA sequence from clone RP11-212L9 on chromosome 1 Contains part
             of the RYR2 gene for ryanodine receptor 2 (cardiac) and a
             CpG island, complete sequence
          Length = 166307

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 310   aagatattaaaagatctata 329
             ||||||||||||||||||||
Sbjct: 41318 aagatattaaaagatctata 41299
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>emb|AL356513.15| Human DNA sequence from clone RP11-108A15 on chromosome X Contains the 3'
              end of a novel gene similar to Chic1 (LOC349423)and a
              selenophosphate synthetase (SPS) pseudogene, complete
              sequence
          Length = 180619

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 583    tttcttctagtctcctcaacacag 606
              ||||||| ||||||||||||||||
Sbjct: 123578 tttcttcaagtctcctcaacacag 123601
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>ref|XM_775615.1| PREDICTED: Strongylocentrotus purpuratus similar to
            Beta-1,3-galactosyltransferase 1 (Beta-1,3-GalTase 1)
            (Beta3GalT1)
            (UDP-galactose:beta-N-acetyl-glucosamine-beta-1,
            3-galactosyltransferase 1) (UDP-Gal:betaGlcNAc beta
            1,3-galactosyltranferase-I) (LOC575198), mRNA
          Length = 2736

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 584  ttcttctagtctcctcaacacaga 607
            |||||||||| |||||||||||||
Sbjct: 2247 ttcttctagtttcctcaacacaga 2224
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>gb|BC035079.2| Homo sapiens zinc finger, ZZ-type containing 3, mRNA (cDNA clone
            IMAGE:5260515), complete cds
          Length = 2877

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 1567 gactgtctacatgaaacaga 1586
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>emb|AL805916.7| Mouse DNA sequence from clone RP23-164N15 on chromosome 11 Contains the
             3' end of a novel gene (4933435A13Rik), the Rel gene for
             reticuloendotheliosis oncogene and a CpG island, complete
             sequence
          Length = 73703

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 15    ttaacctatgtatttttaaa 34
             ||||||||||||||||||||
Sbjct: 50996 ttaacctatgtatttttaaa 51015
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>gb|BC035818.2| Homo sapiens zinc finger, ZZ-type containing 3, mRNA (cDNA clone
            MGC:46330 IMAGE:5554765), complete cds
          Length = 3926

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 2614 gactgtctacatgaaacaga 2633
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>gb|AC166091.3| Glycine max clone gmw1-11j16, complete sequence
          Length = 69947

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 105   tttaacttcttaaccaattt 124
             ||||||||||||||||||||
Sbjct: 11615 tttaacttcttaaccaattt 11596
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>ref|NM_015534.3| Homo sapiens zinc finger, ZZ-type containing 3 (ZZZ3), mRNA
          Length = 4347

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 3040 gactgtctacatgaaacaga 3059
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>gb|AC093296.2| Homo sapiens chromosome 5 clone RP11-536I7, complete sequence
          Length = 160433

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   tatgtatttttaaacaagct 40
            ||||||||||||||||||||
Sbjct: 2007 tatgtatttttaaacaagct 1988
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>gb|AC093689.4| Homo sapiens BAC clone RP11-725M22 from 4, complete sequence
          Length = 167590

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 250    caatacagcatctactgata 269
              ||||||||||||||||||||
Sbjct: 145028 caatacagcatctactgata 145009
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>dbj|AK001224.1| Homo sapiens cDNA FLJ10362 fis, clone NT2RM2001306, highly similar
           to Homo sapiens mRNA; cDNA DKFZp564I052
          Length = 1695

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 gactgtctacatgaaacaga 239
           ||||||||||||||||||||
Sbjct: 412 gactgtctacatgaaacaga 431
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>gb|AC109496.2| Homo sapiens chromosome 5 clone RP11-93D22, complete sequence
          Length = 186984

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    tatgtatttttaaacaagct 40
             ||||||||||||||||||||
Sbjct: 29523 tatgtatttttaaacaagct 29542
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>emb|CR388709.1| Gallus gallus finished cDNA, clone ChEST880k7
          Length = 1096

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 21  tatgtatttttaaacaagct 40
           ||||||||||||||||||||
Sbjct: 958 tatgtatttttaaacaagct 977
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>dbj|AK045182.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130044B01
            product:unclassifiable, full insert sequence
          Length = 2055

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 15   ttaacctatgtatttttaaa 34
            ||||||||||||||||||||
Sbjct: 1228 ttaacctatgtatttttaaa 1247
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>gb|BC035397.1| Homo sapiens zinc finger, ZZ-type containing 3, mRNA (cDNA clone
            IMAGE:5000886), partial cds
          Length = 3006

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 1707 gactgtctacatgaaacaga 1726
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>gb|AC027665.4|AC027665 Genomic sequence for Arabidopsis thaliana BAC F5M15 from chromosome I,
             complete sequence
          Length = 99231

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 563   ttgattgatagctatttagttttc 586
             |||||||||||||||||| |||||
Sbjct: 61596 ttgattgatagctatttaattttc 61619
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 453    gcgtcgtacaaaaaacggac 472
              ||||||||||||||||||||
Sbjct: 848302 gcgtcgtacaaaaaacggac 848283
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>emb|AL732322.10| Mouse DNA sequence from clone RP23-234H9 on chromosome X, complete
             sequence
          Length = 114453

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 202   ataagaatgatcaggactgactgt 225
             ||||||||||||||||| ||||||
Sbjct: 46611 ataagaatgatcaggacagactgt 46588
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>emb|BX641096.1|HSM806926 Homo sapiens mRNA; cDNA DKFZp686N03151 (from clone DKFZp686N03151)
          Length = 4329

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 3023 gactgtctacatgaaacaga 3042
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>emb|BX641001.1|HSM807165 Homo sapiens mRNA; cDNA DKFZp686C16148 (from clone DKFZp686C16148);
            complete cds
          Length = 4347

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 3040 gactgtctacatgaaacaga 3059
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>emb|BX640658.1|HSM806714 Homo sapiens mRNA; cDNA DKFZp313N0119 (from clone DKFZp313N0119)
          Length = 4619

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 1127 gactgtctacatgaaacaga 1146
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>emb|AL929264.4| Zebrafish DNA sequence from clone CH211-59C24 in linkage group 18,
             complete sequence
          Length = 171914

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 119   caatttgttttttcgagatgcaat 142
             |||||||||||||| |||||||||
Sbjct: 94077 caatttgttttttccagatgcaat 94054
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>gb|AC007591.2|F9L1 Arabidopsis thaliana chromosome 1 BAC F9L1 sequence, complete sequence
          Length = 141984

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 55    cttgtttcttctaactttgt 74
             ||||||||||||||||||||
Sbjct: 77685 cttgtttcttctaactttgt 77704
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>emb|AL080063.1|HSM800564 Homo sapiens mRNA; cDNA DKFZp564I052 (from clone DKFZp564I052)
          Length = 1913

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 220 gactgtctacatgaaacaga 239
           ||||||||||||||||||||
Sbjct: 603 gactgtctacatgaaacaga 622
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>dbj|AK074119.1| Homo sapiens mRNA for FLJ00191 protein
          Length = 4737

 Score = 40.1 bits (20), Expect = 8.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 220  gactgtctacatgaaacaga 239
            ||||||||||||||||||||
Sbjct: 3454 gactgtctacatgaaacaga 3473


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,110,602
Number of Sequences: 3902068
Number of extensions: 6110602
Number of successful extensions: 116137
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 116004
Number of HSP's gapped (non-prelim): 133
length of query: 649
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 626
effective length of database: 17,143,297,704
effective search space: 10731704362704
effective search space used: 10731704362704
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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