>NQRA_CHLTR (O84639) Probable Na(+)-translocating NADH-quinone reductase|
           subunit A (EC 1.6.5.-) (Na(+)-translocating NQR subunit
           A) (Na(+)-NQR subunit A) (NQR complex subunit A) (NQR-1
           subunit A)
          Length = 465

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 6   TRTHFYFLKIGWSKVHVQYTYL 71
           TR  F FL++GW+K+ V  TYL
Sbjct: 343 TRESFSFLRLGWNKLTVTRTYL 364

>NQRA_CHLMU (Q9PLU3) Probable Na(+)-translocating NADH-quinone reductase|
           subunit A (EC 1.6.5.-) (Na(+)-translocating NQR subunit
           A) (Na(+)-NQR subunit A) (NQR complex subunit A) (NQR-1
           subunit A)
          Length = 465

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = +3

Query: 6   TRTHFYFLKIGWSKVHVQYTYL 71
           TR  F FL++GW+K+ V  TYL
Sbjct: 343 TREMFSFLRLGWNKLTVTRTYL 364

>TAF5_SCHPO (O13282) Transcription initiation factor TFIID subunit 5|
           (Transcription initiation factor TFIID 72 kDa subunit)
           (TAFII-72)
          Length = 643

 Score = 28.9 bits (63), Expect = 3.6
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 5   YTHTFLFLENWLVQSPCPIYVPTYIMLCFPFEVHS 109
           YTHT+  L +W V S   +Y      + FP  VHS
Sbjct: 57  YTHTYTILRDW-VDSSLELYKAELHRILFPIFVHS 90


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,454,377
Number of Sequences: 219361
Number of extensions: 634703
Number of successful extensions: 1389
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1258
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 80,573,946
effective HSP length: 66
effective length of database: 66,096,120
effective search space used: 1586306880
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)