ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbasd11l20
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_464147.1| Oryza sativa (japonica cultivar-group), mRNA 153 8e-34
2ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group... 153 8e-34
3dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 8e-34
4dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 8e-34
5gb|AY104160.1| Zea mays PCO080306 mRNA sequence 127 5e-26
6gb|BT018338.1| Zea mays clone EL01T0403A05.c mRNA sequence 125 2e-25
7dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
8dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic D... 94 7e-16
9gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete ... 86 2e-13
10dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
12ref|NM_118989.2| Arabidopsis thaliana unknown protein AT4G28470 ... 84 6e-13
13gb|AY230829.1| Arabidopsis thaliana 26S proteasome subunit RPN1b... 84 6e-13
14emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, ... 84 6e-13
15emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BA... 84 6e-13
16gb|AY069881.1| Arabidopsis thaliana AT4g28470/F20O9_150 mRNA seq... 84 6e-13
17gb|AY812494.1| Schistosoma japonicum SJCHGC08055 protein mRNA, p... 82 2e-12
18dbj|AB070256.1| Oryza sativa (japonica cultivar-group) OsRPN1b m... 82 2e-12
19ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 ... 54 6e-04
20gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a... 54 6e-04
21gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regu... 54 6e-04
22gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regu... 54 6e-04
23gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 ma... 54 6e-04
24dbj|AK220903.1| Arabidopsis thaliana mRNA for putative 26S prote... 54 6e-04
25dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
26dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
27dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic D... 50 0.009
28ref|XM_450542.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.14
29dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.14
30dbj|AB070255.1| Oryza sativa (japonica cultivar-group) OsRPN1a m... 46 0.14
31gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, comp... 44 0.54
32gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, com... 42 2.1
33ref|XM_717186.1| Candida albicans SC5314 putative 26S proteasome... 42 2.1
34ref|XM_717074.1| Candida albicans SC5314 putative 26S proteasome... 42 2.1
35ref|XM_652637.1| Aspergillus nidulans FGSC A4 hypothetical prote... 42 2.1
36emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 i... 42 2.1
37gb|AC146719.32| Medicago truncatula clone mth2-17f11, complete s... 42 2.1
38emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in ... 42 2.1
39dbj|AK053276.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN f... 42 2.1
40ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phos... 40 8.4
41ref|NM_020816.1| Homo sapiens kinesin family member 17 (KIF17), ... 40 8.4
42ref|XM_513170.1| PREDICTED: Pan troglodytes kinesin family membe... 40 8.4
43gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cance... 40 8.4
44gb|AC121317.7| Mus musculus chromosome 6, clone RP24-343J20, com... 40 8.4
45gb|AY484427.1| Homo sapiens kinesin isoform KIF17B (KIF17B) mRNA... 40 8.4
46gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genom... 40 8.4
47ref|XM_731938.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.4
48ref|XM_732666.1| Plasmodium chabaudi chabaudi hypothetical prote... 40 8.4
49ref|XM_740578.1| Plasmodium chabaudi chabaudi proteasome 26S reg... 40 8.4
50emb|AL663074.13| Human DNA sequence from clone RP5-930J4 on chro... 40 8.4
51emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chr... 40 8.4
52gb|AC079313.35| Homo sapiens 12q BAC RP11-753H16 (Roswell Park C... 40 8.4
53gb|BC065927.1| Homo sapiens kinesin family member 17, mRNA (cDNA... 40 8.4
54gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, com... 40 8.4
55emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 i... 40 8.4
56gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p... 40 8.4
57gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complet... 40 8.4
58gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, c... 40 8.4
59gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3... 40 8.4
60emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 i... 40 8.4
61emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in... 40 8.4
62emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 i... 40 8.4
63emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 i... 40 8.4
64gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complet... 40 8.4
65dbj|AB037826.2| Homo sapiens mRNA for KIAA1405 protein, partial cds 40 8.4
66dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.4
67dbj|AP004546.1| Lotus japonicus genomic DNA, chromosome 1, clone... 40 8.4
68gb|AC152058.8| Mus musculus BAC clone RP24-327D15 from chromosom... 40 8.4
69emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chr... 40 8.4
70emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chr... 40 8.4
71emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chr... 40 8.4 
>ref|XM_464147.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3121

 Score =  153 bits (77), Expect = 8e-34
 Identities = 179/213 (84%)
 Strand = Plus / Minus

                                                                        
Query: 390  tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtgg 449
            |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    |
Sbjct: 2770 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaataccg 2711

                                                                        
Query: 450  aggtcaggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaaga 509
            | ||||| |||||||| || || || || ||||| || || ||||| ||||||||||| |
Sbjct: 2710 aagtcagcggaatgtatttttcggttgctaattcagcccgttcccctgctgcaagcaata 2651

                                                                        
Query: 510  caggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaacca 569
            | || || | ||| || || || || || |||||||| || ||||| ||||| |||||||
Sbjct: 2650 cgggtgtcgaatgtgtttggaaaccagtaattgtcttgggccttccagcctgaccaacca 2591

                                             
Query: 570  catcaactgcttgcccaacccgcactggaacag 602
            ||||||| |||||||||||||| ||||||||||
Sbjct: 2590 catcaacagcttgcccaacccgtactggaacag 2558
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>ref|XM_506717.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1008_C03.11 mRNA
          Length = 3169

 Score =  153 bits (77), Expect = 8e-34
 Identities = 179/213 (84%)
 Strand = Plus / Minus

                                                                        
Query: 390  tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtgg 449
            |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    |
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaataccg 2718

                                                                        
Query: 450  aggtcaggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaaga 509
            | ||||| |||||||| || || || || ||||| || || ||||| ||||||||||| |
Sbjct: 2717 aagtcagcggaatgtatttttcggttgctaattcagcccgttcccctgctgcaagcaata 2658

                                                                        
Query: 510  caggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaacca 569
            | || || | ||| || || || || || |||||||| || ||||| ||||| |||||||
Sbjct: 2657 cgggtgtcgaatgtgtttggaaaccagtaattgtcttgggccttccagcctgaccaacca 2598

                                             
Query: 570  catcaactgcttgcccaacccgcactggaacag 602
            ||||||| |||||||||||||| ||||||||||
Sbjct: 2597 catcaacagcttgcccaacccgtactggaacag 2565
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>dbj|AK121963.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033108C09, full
            insert sequence
          Length = 3120

 Score =  153 bits (77), Expect = 8e-34
 Identities = 179/213 (84%)
 Strand = Plus / Minus

                                                                        
Query: 390  tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtgg 449
            |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    |
Sbjct: 2769 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaataccg 2710

                                                                        
Query: 450  aggtcaggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaaga 509
            | ||||| |||||||| || || || || ||||| || || ||||| ||||||||||| |
Sbjct: 2709 aagtcagcggaatgtatttttcggttgctaattcagcccgttcccctgctgcaagcaata 2650

                                                                        
Query: 510  caggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaacca 569
            | || || | ||| || || || || || |||||||| || ||||| ||||| |||||||
Sbjct: 2649 cgggtgtcgaatgtgtttggaaaccagtaattgtcttgggccttccagcctgaccaacca 2590

                                             
Query: 570  catcaactgcttgcccaacccgcactggaacag 602
            ||||||| |||||||||||||| ||||||||||
Sbjct: 2589 catcaacagcttgcccaacccgtactggaacag 2557
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>dbj|AK105609.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B03, full
            insert sequence
          Length = 3169

 Score =  153 bits (77), Expect = 8e-34
 Identities = 179/213 (84%)
 Strand = Plus / Minus

                                                                        
Query: 390  tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtgg 449
            |||||||||||||||  ||||||||||||||||||||||||||||||||||||||    |
Sbjct: 2777 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaataccg 2718

                                                                        
Query: 450  aggtcaggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaaga 509
            | ||||| |||||||| || || || || ||||| || || ||||| ||||||||||| |
Sbjct: 2717 aagtcagcggaatgtatttttcggttgctaattcagcccgttcccctgctgcaagcaata 2658

                                                                        
Query: 510  caggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaacca 569
            | || || | ||| || || || || || |||||||| || ||||| ||||| |||||||
Sbjct: 2657 cgggtgtcgaatgtgtttggaaaccagtaattgtcttgggccttccagcctgaccaacca 2598

                                             
Query: 570  catcaactgcttgcccaacccgcactggaacag 602
            ||||||| |||||||||||||| ||||||||||
Sbjct: 2597 catcaacagcttgcccaacccgtactggaacag 2565
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>gb|AY104160.1| Zea mays PCO080306 mRNA sequence
          Length = 1460

 Score =  127 bits (64), Expect = 5e-26
 Identities = 160/192 (83%)
 Strand = Plus / Minus

                                                                        
Query: 394  tcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtggaggt 453
            ||||||||||||||| || ||||||||||||||||| ||||||||||| |     | |||
Sbjct: 1044 tcactcctcgtggtactctgggttcttcttcagaatcacaaagccctctagtaccggggt 985

                                                                        
Query: 454  caggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacagg 513
            ||| |||||||| || ||||| || | ||| |||| |||||| ||||| |||||||| ||
Sbjct: 984  cagtggaatgtatttttcagttgctagttcagctctctcccctgctgcgagcaagaccgg 925

                                                                        
Query: 514  agtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatc 573
             ||||  || ||||| ||||||||||||||||| || ||||||||||| |||||||| ||
Sbjct: 924  cgtggagtgtgtctggaagccggtgattgtcttcggccttcctgcctgaccaaccacgtc 865

                        
Query: 574  aactgcttgccc 585
             || ||||||||
Sbjct: 864  gaccgcttgccc 853
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>gb|BT018338.1| Zea mays clone EL01T0403A05.c mRNA sequence
          Length = 1023

 Score =  125 bits (63), Expect = 2e-25
 Identities = 162/195 (83%)
 Strand = Plus / Minus

                                                                       
Query: 394 tcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaacgtggaggt 453
           |||||| || ||||| |||||||||||||||| ||| ||||||||||| ||    |  ||
Sbjct: 595 tcactcttcatggtactccgggttcttcttcaaaatcacaaagccctctaataccggagt 536

                                                                       
Query: 454 caggggaatgtacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacagg 513
           ||| || ||||| || ||||| || | ||| |||| |||||| |||||||||||||| ||
Sbjct: 535 cagtgggatgtatttctcagttgctagttcagctctctcccctgctgcaagcaagactgg 476

                                                                       
Query: 514 agtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatc 573
            ||||  || |||||||||||||| ||||||||||| ||||||||||| |||||||| ||
Sbjct: 475 tgtggagtgtgtctgaaagccggtaattgtcttaggccttcctgcctgaccaaccacgtc 416

                          
Query: 574 aactgcttgcccaac 588
            || |||||||||||
Sbjct: 415 cacagcttgcccaac 401
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                      
Query: 390     tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaa 444
               |||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 2570749 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 2570695



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                           
Query: 539     attgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcactgga 598
               |||||||| || ||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 2570514 attgtcttgggccttccagcctgaccaaccacatcaacagcttgcccaacccgtactgga 2570455

                   
Query: 599     acag 602
               ||||
Sbjct: 2570454 acag 2570451
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>dbj|AP005288.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1008_C03
          Length = 103297

 Score = 93.7 bits (47), Expect = 7e-16
 Identities = 53/55 (96%)
 Strand = Plus / Minus

                                                                    
Query: 390   tccctcactcctcgtggtattccgggttcttcttcagaattacaaagccctccaa 444
             |||||||||||||||  ||||||||||||||||||||||||||||||||||||||
Sbjct: 49532 tccctcactcctcgttatattccgggttcttcttcagaattacaaagccctccaa 49478



 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 58/64 (90%)
 Strand = Plus / Minus

                                                                         
Query: 539   attgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcactgga 598
             |||||||| || ||||| ||||| |||||||||||||| |||||||||||||| ||||||
Sbjct: 49297 attgtcttgggccttccagcctgaccaaccacatcaacagcttgcccaacccgtactgga 49238

                 
Query: 599   acag 602
             ||||
Sbjct: 49237 acag 49234
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>gb|AC151527.13| Medicago truncatula clone mth2-135i19, complete sequence
          Length = 132470

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                         
Query: 509   acaggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaacc 568
             ||||| |||| ||| |||||||||||||||||||||||||| |  |||||||||||||| 
Sbjct: 80104 acaggggtggaatgggtctgaaagccggtgattgtcttaggacgacctgcctgtccaaca 80163

                                    
Query: 569   acatcaactgcttgcccaacccg 591
             || || |||||||| ||||||||
Sbjct: 80164 acgtctactgcttggccaacccg 80186
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 115/139 (82%)
 Strand = Plus / Plus

                                                                            
Query: 464      tacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacaggagtggtatgc 523
                ||||| ||||| ||||  |||||||||||||| || ||||| || ||||| || | ||| 
Sbjct: 28907881 tacttttcagttgccagctctgctcgctcccctgcagcaagtaatacaggcgttgaatgt 28907940

                                                                            
Query: 524      gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
                ||||| || || ||||||||||| ||||| |||||||| || || |||||||||||||| 
Sbjct: 28907941 gtctggaatccagtgattgtcttgggtctacctgcctgaccgacgacatcaactgcttgg 28908000

                                   
Query: 584      ccaacccgcactggaacag 602
                ||||| || || |||||||
Sbjct: 28908001 ccaacacgtaccggaacag 28908019
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>dbj|AP004278.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0468G03
          Length = 143918

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 115/139 (82%)
 Strand = Plus / Plus

                                                                         
Query: 464   tacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacaggagtggtatgc 523
             ||||| ||||| ||||  |||||||||||||| || ||||| || ||||| || | ||| 
Sbjct: 57925 tacttttcagttgccagctctgctcgctcccctgcagcaagtaatacaggcgttgaatgt 57984

                                                                         
Query: 524   gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
             ||||| || || ||||||||||| ||||| |||||||| || || |||||||||||||| 
Sbjct: 57985 gtctggaatccagtgattgtcttgggtctacctgcctgaccgacgacatcaactgcttgg 58044

                                
Query: 584   ccaacccgcactggaacag 602
             ||||| || || |||||||
Sbjct: 58045 ccaacacgtaccggaacag 58063
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>ref|NM_118989.2| Arabidopsis thaliana unknown protein AT4G28470 mRNA, complete cds
          Length = 3068

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 536  gtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcact 595
            ||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 2719 gtgattgtcttaggtcggcctgcctgtccaaccacatcaaccgcttgtcctacccgcact 2660

              
Query: 596  gg 597
            ||
Sbjct: 2659 gg 2658
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>gb|AY230829.1| Arabidopsis thaliana 26S proteasome subunit RPN1b (RPN1b) mRNA,
            complete cds
          Length = 2959

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 536  gtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcact 595
            ||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 2593 gtgattgtcttaggtcggcctgcctgtccaaccacatcaaccgcttgtcctacccgcact 2534

              
Query: 596  gg 597
            ||
Sbjct: 2533 gg 2532
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>emb|AL161572.2|ATCHRIV68 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 68
          Length = 199749

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                          
Query: 536    gtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcact 595
              ||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 182811 gtgattgtcttaggtcggcctgcctgtccaaccacatcaaccgcttgtcctacccgcact 182870

                
Query: 596    gg 597
              ||
Sbjct: 182871 gg 182872
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>emb|AL021749.1|ATF20O9 Arabidopsis thaliana DNA chromosome 4, BAC clone F20O9 (ESSA project)
          Length = 93695

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Plus

                                                                         
Query: 536   gtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcact 595
             ||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 44894 gtgattgtcttaggtcggcctgcctgtccaaccacatcaaccgcttgtcctacccgcact 44953

               
Query: 596   gg 597
             ||
Sbjct: 44954 gg 44955
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>gb|AY069881.1| Arabidopsis thaliana AT4g28470/F20O9_150 mRNA sequence
          Length = 3032

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 57/62 (91%)
 Strand = Plus / Minus

                                                                        
Query: 536  gtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcact 595
            ||||||||||||||||  ||||||||||||||||||||||| ||||| || |||||||||
Sbjct: 2721 gtgattgtcttaggtcggcctgcctgtccaaccacatcaaccgcttgtcctacccgcact 2662

              
Query: 596  gg 597
            ||
Sbjct: 2661 gg 2660
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>gb|AY812494.1| Schistosoma japonicum SJCHGC08055 protein mRNA, partial cds
          Length = 626

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 59/65 (90%)
 Strand = Plus / Minus

                                                                       
Query: 512 ggagtggtatgcgtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccaca 571
           |||||||||||||||||||| || |||||||| || |||||||||||||| ||||| |||
Sbjct: 376 ggagtggtatgcgtctgaaatcctgtgattgttttcggtcttcctgcctggccaacaaca 317

                
Query: 572 tcaac 576
           |||||
Sbjct: 316 tcaac 312
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>dbj|AB070256.1| Oryza sativa (japonica cultivar-group) OsRPN1b mRNA for 26S
           proteasome regulatory particle non-ATPase subunit1b,
           partial cds
          Length = 1004

 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 101/121 (83%)
 Strand = Plus / Minus

                                                                       
Query: 482 tctgctcgctcccccgctgcaagcaagacaggagtggtatgcgtctgaaagccggtgatt 541
           |||||||||||||| || ||||| || ||||| || | ||| ||||| || || ||||||
Sbjct: 631 tctgctcgctcccctgcagcaagtaatacaggcgttgaatgtgtctggaatccagtgatt 572

                                                                       
Query: 542 gtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaacccgcactggaaca 601
           ||||| ||||| |||||||| || || |||||||||||||| ||||| || || ||||||
Sbjct: 571 gtcttgggtctacctgcctgaccgacgacatcaactgcttggccaacacgtaccggaaca 512

            
Query: 602 g 602
           |
Sbjct: 511 g 511
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>ref|NM_127618.2| Arabidopsis thaliana unknown protein AT2G20580 mRNA, complete cds
          Length = 3043

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 563  ccaaccacatcaactgcttgcccaacccgcactgg 597
            |||||||||||||||||||| || |||||||||||
Sbjct: 2708 ccaaccacatcaactgcttgtcctacccgcactgg 2674
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>gb|AY230828.1| Arabidopsis thaliana 26S proteasome subunit RPN1a (RPN1a) mRNA,
            complete cds
          Length = 2891

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 563  ccaaccacatcaactgcttgcccaacccgcactgg 597
            |||||||||||||||||||| || |||||||||||
Sbjct: 2591 ccaaccacatcaactgcttgtcctacccgcactgg 2557
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>gb|AY040061.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2
            (At2g20580) mRNA, complete cds
          Length = 2676

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 563  ccaaccacatcaactgcttgcccaacccgcactgg 597
            |||||||||||||||||||| || |||||||||||
Sbjct: 2507 ccaaccacatcaactgcttgtcctacccgcactgg 2473
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>gb|AF360216.1| Arabidopsis thaliana putative 26S proteasome regulatory subunit S2
            (At2g20580) mRNA, complete cds
          Length = 3041

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                               
Query: 563  ccaaccacatcaactgcttgcccaacccgcactgg 597
            |||||||||||||||||||| || |||||||||||
Sbjct: 2708 ccaaccacatcaactgcttgtcctacccgcactgg 2674
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>gb|AC007048.5| Arabidopsis thaliana chromosome 2 clone F23N11 map mi148, complete
             sequence
          Length = 61384

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                                
Query: 563   ccaaccacatcaactgcttgcccaacccgcactgg 597
             |||||||||||||||||||| || |||||||||||
Sbjct: 50753 ccaaccacatcaactgcttgtcctacccgcactgg 50787
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>dbj|AK220903.1| Arabidopsis thaliana mRNA for putative 26S proteasome regulatory
           subunit S2, complete cds, clone: RAFL22-46-F16
          Length = 916

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 33/35 (94%)
 Strand = Plus / Minus

                                              
Query: 563 ccaaccacatcaactgcttgcccaacccgcactgg 597
           |||||||||||||||||||| || |||||||||||
Sbjct: 583 ccaaccacatcaactgcttgtcctacccgcactgg 549
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                           
Query: 464     tacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacaggagtggtatgc 523
               ||||| ||||| ||||  |||||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 9575280 tacttttcagttgccagctctgctcgttcccctgcggcaagtaatacaggcgttgaatgc 9575221

                                                                           
Query: 524     gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
               ||||| || || || |||||||| ||||  || ||||| || || || ||||||||||| 
Sbjct: 9575220 gtctggaatccagtaattgtcttgggtcgacccgcctgaccgacgacgtcaactgcttga 9575161

                    
Query: 584     ccaac 588
               |||||
Sbjct: 9575160 ccaac 9575156
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>dbj|AP005811.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0706E03
          Length = 188028

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                         
Query: 464   tacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacaggagtggtatgc 523
             ||||| ||||| ||||  |||||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 15377 tacttttcagttgccagctctgctcgttcccctgcggcaagtaatacaggcgttgaatgc 15318

                                                                         
Query: 524   gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
             ||||| || || || |||||||| ||||  || ||||| || || || ||||||||||| 
Sbjct: 15317 gtctggaatccagtaattgtcttgggtcgacccgcctgaccgacgacgtcaactgcttga 15258

                  
Query: 584   ccaac 588
             |||||
Sbjct: 15257 ccaac 15253
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>dbj|AP005593.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0692F07
          Length = 141544

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 100/125 (80%)
 Strand = Plus / Minus

                                                                          
Query: 464    tacttgtcagtcgccaattctgctcgctcccccgctgcaagcaagacaggagtggtatgc 523
              ||||| ||||| ||||  |||||||| ||||| || ||||| || ||||| || | ||||
Sbjct: 138916 tacttttcagttgccagctctgctcgttcccctgcggcaagtaatacaggcgttgaatgc 138857

                                                                          
Query: 524    gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
              ||||| || || || |||||||| ||||  || ||||| || || || ||||||||||| 
Sbjct: 138856 gtctggaatccagtaattgtcttgggtcgacccgcctgaccgacgacgtcaactgcttga 138797

                   
Query: 584    ccaac 588
              |||||
Sbjct: 138796 ccaac 138792
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>ref|XM_450542.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3092

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 482  tctgctcgctcccccgctgcaagcaagacaggagtggtatgcgtctgaaagccggtgatt 541
            |||||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||
Sbjct: 2721 tctgctcgttcccctgcggcaagtaatacaggcgttgaatgcgtctggaatccagtaatt 2662

                                                           
Query: 542  gtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaac 588
            ||||| ||||  || ||||| || || || ||||||||||| |||||
Sbjct: 2661 gtcttgggtcgacccgcctgaccgacgacgtcaactgcttgaccaac 2615
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>dbj|AK071400.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023092J12, full
            insert sequence
          Length = 3091

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                        
Query: 482  tctgctcgctcccccgctgcaagcaagacaggagtggtatgcgtctgaaagccggtgatt 541
            |||||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||
Sbjct: 2720 tctgctcgttcccctgcggcaagtaatacaggcgttgaatgcgtctggaatccagtaatt 2661

                                                           
Query: 542  gtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaac 588
            ||||| ||||  || ||||| || || || ||||||||||| |||||
Sbjct: 2660 gtcttgggtcgacccgcctgaccgacgacgtcaactgcttgaccaac 2614
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>dbj|AB070255.1| Oryza sativa (japonica cultivar-group) OsRPN1a mRNA for 26S
           proteasome regulatory particle non-ATPase subunit1a,
           partial cds
          Length = 636

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 86/107 (80%)
 Strand = Plus / Minus

                                                                       
Query: 482 tctgctcgctcccccgctgcaagcaagacaggagtggtatgcgtctgaaagccggtgatt 541
           |||||||| ||||| || ||||| || ||||| || | ||||||||| || || || |||
Sbjct: 238 tctgctcgttcccctgcggcaagtaatacaggcgttgaatgcgtctggaatccagtaatt 179

                                                          
Query: 542 gtcttaggtcttcctgcctgtccaaccacatcaactgcttgcccaac 588
           ||||| ||||  || ||||| || || || ||||||||||| |||||
Sbjct: 178 gtcttgggtcgacccgcctgaccgacgacgtcaactgcttgaccaac 132
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>gb|AC102655.7| Mus musculus chromosome 19, clone RP23-13N2, complete sequence
          Length = 202294

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 245   aataaaaatgtttttggatgaa 266
             ||||||||||||||||||||||
Sbjct: 56757 aataaaaatgtttttggatgaa 56736
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>gb|AC163094.5| Mus musculus chromosome 5, clone RP23-123P10, complete sequence
          Length = 208850

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 96    tacacacttgatacatataca 116
             |||||||||||||||||||||
Sbjct: 48749 tacacacttgatacatataca 48729
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>ref|XM_717186.1| Candida albicans SC5314 putative 26S proteasome regulatory particle
            subunit Rpn1p (CaO19_12421), mRNA
          Length = 2985

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 560  tgtccaaccacatcaactgcttgcccaac 588
            |||||||| |||||||||||||| |||||
Sbjct: 2810 tgtccaacaacatcaactgcttgaccaac 2782
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>ref|XM_717074.1| Candida albicans SC5314 putative 26S proteasome regulatory particle
            subunit Rpn1p (CaO19_4956), mRNA
          Length = 2985

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 560  tgtccaaccacatcaactgcttgcccaac 588
            |||||||| |||||||||||||| |||||
Sbjct: 2810 tgtccaacaacatcaactgcttgaccaac 2782
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>ref|XM_652637.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN0125.2), mRNA
          Length = 4749

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 36/41 (87%)
 Strand = Plus / Minus

                                                     
Query: 536  gtgattgtcttaggtcttcctgcctgtccaaccacatcaac 576
            ||||| ||||| || ||||| ||||||||||| ||||||||
Sbjct: 4598 gtgatcgtctttggccttccagcctgtccaacaacatcaac 4558
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>emb|CR352209.10| Zebrafish DNA sequence from clone DKEY-150O13 in linkage group 24,
              complete sequence
          Length = 143425

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     cacacttgatacatatacaaa 118
              |||||||||||||||||||||
Sbjct: 114349 cacacttgatacatatacaaa 114369



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 98     cacacttgatacatatacaaa 118
              |||||||||||||||||||||
Sbjct: 104510 cacacttgatacatatacaaa 104530
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>gb|AC146719.32| Medicago truncatula clone mth2-17f11, complete sequence
          Length = 127364

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                         
Query: 524   gtctgaaagccggtgattgtcttaggtcttcctgcctgtccaaccacatcaactgcttgc 583
             |||||||| || |||||| ||||||| |  || ||||||||||| || || |||||||| 
Sbjct: 39216 gtctgaaaaccagtgattttcttaggacgaccggcctgtccaacaacgtccactgcttgg 39157

                  
Query: 584   ccaac 588
             |||||
Sbjct: 39156 ccaac 39152
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>emb|BX663612.9| Zebrafish DNA sequence from clone DKEY-24M14 in linkage group 7, complete
              sequence
          Length = 181415

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 98     cacacttgatacatatacaaa 118
              |||||||||||||||||||||
Sbjct: 154850 cacacttgatacatatacaaa 154830
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>dbj|AK053276.1| Mus musculus 0 day neonate eyeball cDNA, RIKEN full-length enriched
            library, clone:E130006D24 product:unclassifiable, full
            insert sequence
          Length = 3651

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 96   tacacacttgatacatataca 116
            |||||||||||||||||||||
Sbjct: 2970 tacacacttgatacatataca 2990
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>ref|NM_105369.1| Arabidopsis thaliana glycerophosphodiester phosphodiesterase/ kinase
            AT1G66980 mRNA, complete cds
          Length = 3512

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 247  taaaaatgtttttggatgaa 266
            ||||||||||||||||||||
Sbjct: 3459 taaaaatgtttttggatgaa 3440
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>ref|NM_020816.1| Homo sapiens kinesin family member 17 (KIF17), mRNA
          Length = 3968

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  agccctccaacgtggaggtc 454
            ||||||||||||||||||||
Sbjct: 1983 agccctccaacgtggaggtc 2002
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>ref|XM_513170.1| PREDICTED: Pan troglodytes kinesin family member 17 (LOC456592),
           mRNA
          Length = 2922

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 435 agccctccaacgtggaggtc 454
           ||||||||||||||||||||
Sbjct: 560 agccctccaacgtggaggtc 579
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>gb|AC164628.8| Mus musculus 6 BAC RP23-82H18 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 205032

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     acacacttgatacatataca 116
              ||||||||||||||||||||
Sbjct: 184660 acacacttgatacatataca 184679
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>gb|AC121317.7| Mus musculus chromosome 6, clone RP24-343J20, complete sequence
          Length = 179807

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    acacacttgatacatataca 116
             ||||||||||||||||||||
Sbjct: 23843 acacacttgatacatataca 23862
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>gb|AY484427.1| Homo sapiens kinesin isoform KIF17B (KIF17B) mRNA, complete cds
          Length = 3968

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  agccctccaacgtggaggtc 454
            ||||||||||||||||||||
Sbjct: 1983 agccctccaacgtggaggtc 2002
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>gb|AC007152.9| Arabidopsis thaliana chromosome I BAC F1O19 genomic sequence, complete
             sequence
          Length = 90387

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 247   taaaaatgtttttggatgaa 266
             ||||||||||||||||||||
Sbjct: 27065 taaaaatgtttttggatgaa 27084
to top
>ref|XM_731938.1| Plasmodium chabaudi chabaudi hypothetical protein (PC101680.00.0)
           partial mRNA
          Length = 287

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 108 acatatacaaataagcttaa 127
           ||||||||||||||||||||
Sbjct: 213 acatatacaaataagcttaa 232
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>ref|XM_732666.1| Plasmodium chabaudi chabaudi hypothetical protein (PC105151.00.0)
           partial mRNA
          Length = 984

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 100 cacttgatacatatacaaat 119
           ||||||||||||||||||||
Sbjct: 599 cacttgatacatatacaaat 618
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>ref|XM_740578.1| Plasmodium chabaudi chabaudi proteasome 26S regulatory subunit,
            (PC000755.01.0) partial mRNA
          Length = 2130

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 50/60 (83%)
 Strand = Plus / Minus

                                                                        
Query: 552  ttcctgcctgtccaaccacatcaactgcttgcccaacccgcactggaacaggaagaggct 611
            ||||||| |||||||| |  ||||| || || ||||| ||||| | ||||||||||||||
Sbjct: 1963 ttcctgcttgtccaacaatgtcaacagcctgtccaacacgcacagaaacaggaagaggct 1904
to top
>emb|AL663074.13| Human DNA sequence from clone RP5-930J4 on chromosome 1 Contains the 5'
             end of the KIF17 gene for kinesin family member 17, three
             novel genes, the 3' end of gene HP1-BP74 and two CpG
             islands, complete sequence
          Length = 85781

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   agccctccaacgtggaggtc 454
             ||||||||||||||||||||
Sbjct: 16384 agccctccaacgtggaggtc 16365
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>emb|AL158086.32| Human DNA sequence from clone RP4-815O16 on chromosome 1p35.1-36.13
             Contains the C1QA gene for complement component 1( q
             subcomponent, alpha polypeptide), the C1QG gene for
             complement component 1 (q subcomponent, gamma
             polypeptide), the C1QB gene for complement component 1 (q
             subcomponent, beta polypeptide), the 5' end of the  EPHB2
             gene for EphB2 and a CpG island, complete sequence
          Length = 87320

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 549   gtcttcctgcctgtccaaccacat 572
             |||||||||||| |||||||||||
Sbjct: 42163 gtcttcctgcctttccaaccacat 42186
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>gb|AC079313.35| Homo sapiens 12q BAC RP11-753H16 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 160232

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 596   ggaacaggaagaggcttcag 615
             ||||||||||||||||||||
Sbjct: 12838 ggaacaggaagaggcttcag 12819
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>gb|BC065927.1| Homo sapiens kinesin family member 17, mRNA (cDNA clone MGC:70843
            IMAGE:6171598), complete cds
          Length = 3750

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  agccctccaacgtggaggtc 454
            ||||||||||||||||||||
Sbjct: 1747 agccctccaacgtggaggtc 1766
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>gb|AC107976.4| Homo sapiens chromosome 15, clone CTD-2576F9, complete sequence
          Length = 131548

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 72    cagttctaaagatgtaactt 91
             ||||||||||||||||||||
Sbjct: 64502 cagttctaaagatgtaactt 64521
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>emb|BX294171.10| Zebrafish DNA sequence from clone DKEY-263M10 in linkage group 1,
             complete sequence
          Length = 121187

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 353   ctccaaaaacttgcatcaga 372
             ||||||||||||||||||||
Sbjct: 30564 ctccaaaaacttgcatcaga 30545
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>gb|AC090943.3| Homo sapiens chromosome 3 clone RP11-22O15 map 3p, complete sequence
          Length = 162949

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 277    atgccgaggtgtaagagcat 296
              ||||||||||||||||||||
Sbjct: 107859 atgccgaggtgtaagagcat 107878
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>gb|AC008273.2| Homo sapiens BAC clone RP11-150O2 from 2, complete sequence
          Length = 151297

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 390   tccctcactcctcgtggtat 409
             ||||||||||||||||||||
Sbjct: 66748 tccctcactcctcgtggtat 66729
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>gb|AC132220.10| Homo sapiens chromosome 15, clone RP11-1142D4, complete sequence
          Length = 162101

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 72    cagttctaaagatgtaactt 91
             ||||||||||||||||||||
Sbjct: 67063 cagttctaaagatgtaactt 67044
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>gb|AC091291.2| Homo sapiens chromosome 3 clone RP11-654A18 map 3p, complete sequence
          Length = 184579

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 277   atgccgaggtgtaagagcat 296
             ||||||||||||||||||||
Sbjct: 65374 atgccgaggtgtaagagcat 65393
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>emb|AL953916.14| Zebrafish DNA sequence from clone CH211-246I7 in linkage group 12,
              complete sequence
          Length = 177468

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 247    taaaaatgtttttggatgaa 266
              ||||||||||||||||||||
Sbjct: 161862 taaaaatgtttttggatgaa 161843
to top
>emb|AL672058.5| Zebrafish DNA sequence from clone BUSM1-47J20 in linkage group 1,
              complete sequence
          Length = 130339

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 353    ctccaaaaacttgcatcaga 372
              ||||||||||||||||||||
Sbjct: 100541 ctccaaaaacttgcatcaga 100560
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>emb|CR556696.19| Zebrafish DNA sequence from clone CH211-80J13 in linkage group 20,
             complete sequence
          Length = 130645

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 46    tgtgctagtgaatgacaacg 65
             ||||||||||||||||||||
Sbjct: 71131 tgtgctagtgaatgacaacg 71112
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>emb|BX005407.5| Zebrafish DNA sequence from clone CH211-222C22 in linkage group 5,
             complete sequence
          Length = 209796

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 96    tacacacttgatacatatac 115
             ||||||||||||||||||||
Sbjct: 49955 tacacacttgatacatatac 49936
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>gb|AY449460.1| Oikopleura dioica clone BACOIKO004 7xk22, complete sequence
          Length = 131867

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   tttttggatgaaccaccagc 274
             ||||||||||||||||||||
Sbjct: 64488 tttttggatgaaccaccagc 64507
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>dbj|AB037826.2| Homo sapiens mRNA for KIAA1405 protein, partial cds
          Length = 3570

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 435  agccctccaacgtggaggtc 454
            ||||||||||||||||||||
Sbjct: 1585 agccctccaacgtggaggtc 1604
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>dbj|AP006372.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT36C05, TM0215b,
             complete sequence
          Length = 84914

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    acatactgtgctagtgaatgacaa 63
             |||||||||| |||||||||||||
Sbjct: 74278 acatactgtgttagtgaatgacaa 74255
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>dbj|AP004546.1| Lotus japonicus genomic DNA, chromosome 1, clone:LjT43N05, TM0178,
             complete sequence
          Length = 97268

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 40    acatactgtgctagtgaatgacaa 63
             |||||||||| |||||||||||||
Sbjct: 40708 acatactgtgttagtgaatgacaa 40685
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>gb|AC152058.8| Mus musculus BAC clone RP24-327D15 from chromosome 10, complete sequence
          Length = 204754

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 596    ggaacaggaagaggcttcag 615
              ||||||||||||||||||||
Sbjct: 101020 ggaacaggaagaggcttcag 101039
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>emb|AL844859.5| Mouse DNA sequence from clone RP23-263O20 on chromosome 2, complete
             sequence
          Length = 151493

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 245   aataaaaatgtttttggatg 264
             ||||||||||||||||||||
Sbjct: 61609 aataaaaatgtttttggatg 61590
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>emb|AL604043.11| Mouse DNA sequence from clone RP23-391H8 on chromosome 11, complete
             sequence
          Length = 221374

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    acacacttgatacatataca 116
             ||||||||||||||||||||
Sbjct: 64556 acacacttgatacatataca 64575
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>emb|AL138784.30| Human DNA sequence from clone RP5-1102M4 on chromosome 1, complete
             sequence
          Length = 150434

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 435   agccctccaacgtggaggtc 454
             ||||||||||||||||||||
Sbjct: 39457 agccctccaacgtggaggtc 39438


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,506,362
Number of Sequences: 3902068
Number of extensions: 5506362
Number of successful extensions: 98986
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 98757
Number of HSP's gapped (non-prelim): 221
length of query: 618
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 595
effective length of database: 17,143,297,704
effective search space: 10200262133880
effective search space used: 10200262133880
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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